View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1262_low_14 (Length: 500)
Name: NF1262_low_14
Description: NF1262
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1262_low_14 |
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Alignment Details
Target: chr7 (Bit Score: 445; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 445; E-Value: 0
Query Start/End: Original strand, 11 - 471
Target Start/End: Original strand, 1698564 - 1699024
Alignment:
| Q |
11 |
caaaggtaataacttagttgtaattcatcttgagttagatacaaacttgagtcagagtcctataaatatgtgacttgtacaagtcatttaccatcttttt |
110 |
Q |
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| T |
1698564 |
caaaggtaataacttagttgtaattcatctagagttagatacaaacttgagtcagagtcctataaatatgtgacttgtacaagtcatttaccgtcttttt |
1698663 |
T |
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| Q |
111 |
caattgatatataatgctacctcatgactcatgagtatcaatatggtttttatgcagtttaaatacaaaaccagatcaaattatctttctcaactgctac |
210 |
Q |
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| T |
1698664 |
caattgatatataatgctacctcatgactcatgagtatcaatatggtttttatgcagtttaaatacaaaaccagatcaaattatctttctcaactgctac |
1698763 |
T |
|
| Q |
211 |
cctcccttagactcaaccaccgaaattccactacttaccgtgcttcgagcatctccaacaaacagcaaaagacatacataagccatatgactcatgttct |
310 |
Q |
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| T |
1698764 |
cctcccttagactcaaccaccgaaattccactacttaccgtgcttcgagcatctccaacaaacagcaaaagacatacataagccatatgactcatgttct |
1698863 |
T |
|
| Q |
311 |
taatcacacaaacaacagtgttgctctggttttaattaactaagcataactaaccgcaacggcgacatactcaagaatactcacaacaggatcaatattc |
410 |
Q |
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|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
1698864 |
taatcacacaaacaacagtgttgcgctggttttaattaactaagcataactaaccgcaacggcgacatactcaagaatactcacaacaggatcaatattc |
1698963 |
T |
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| Q |
411 |
tgaacactatccaacattaaacctgttatcatcgcccaaggatccaactggtatggacaaa |
471 |
Q |
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| T |
1698964 |
tgaacactatccaacattaaacttgttatcatcgcccaaggatccaactggtatggacaaa |
1699024 |
T |
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