View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1262_low_54 (Length: 317)

Name: NF1262_low_54
Description: NF1262
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1262_low_54
NF1262_low_54
[»] chr5 (35 HSPs)
chr5 (1-195)||(13651344-13651538)
chr5 (28-107)||(13646354-13646433)
chr5 (28-107)||(13656680-13656759)
chr5 (224-270)||(7085626-7085672)
chr5 (224-270)||(8484661-8484707)
chr5 (224-270)||(10631289-10631335)
chr5 (224-270)||(11926501-11926547)
chr5 (224-270)||(18207358-18207404)
chr5 (224-270)||(19456211-19456257)
chr5 (224-270)||(22693086-22693132)
chr5 (224-270)||(27498731-27498777)
chr5 (224-270)||(35425164-35425210)
chr5 (224-270)||(37495205-37495251)
chr5 (224-270)||(41351104-41351150)
chr5 (224-270)||(15641106-15641151)
chr5 (224-266)||(21236362-21236404)
chr5 (224-270)||(27487554-27487600)
chr5 (224-270)||(30485979-30486025)
chr5 (224-270)||(33709503-33709549)
chr5 (224-270)||(38630979-38631025)
chr5 (224-270)||(38684358-38684404)
chr5 (224-260)||(41084144-41084180)
chr5 (224-271)||(7151453-7151500)
chr5 (224-271)||(22392838-22392885)
chr5 (224-270)||(4603928-4603974)
chr5 (224-270)||(10869565-10869611)
chr5 (224-270)||(19145412-19145458)
chr5 (224-270)||(25548534-25548580)
chr5 (224-270)||(25750613-25750659)
chr5 (224-270)||(32059440-32059486)
chr5 (224-270)||(33737893-33737938)
chr5 (224-270)||(34049962-34050008)
chr5 (224-270)||(34310293-34310339)
chr5 (229-270)||(11464913-11464954)
chr5 (233-269)||(42193635-42193671)
[»] scaffold0051 (1 HSPs)
scaffold0051 (224-270)||(52871-52917)
[»] chr7 (36 HSPs)
chr7 (224-269)||(22299958-22300003)
chr7 (224-270)||(2751426-2751472)
chr7 (224-270)||(7275432-7275478)
chr7 (224-270)||(16374149-16374195)
chr7 (224-270)||(22120043-22120089)
chr7 (224-270)||(28089974-28090020)
chr7 (224-270)||(31712902-31712948)
chr7 (224-270)||(40542910-40542956)
chr7 (224-271)||(18044261-18044308)
chr7 (224-271)||(36395500-36395547)
chr7 (224-271)||(36772303-36772350)
chr7 (224-270)||(654705-654751)
chr7 (224-270)||(3851912-3851958)
chr7 (224-270)||(7175862-7175908)
chr7 (224-270)||(11998004-11998050)
chr7 (224-270)||(17196950-17196996)
chr7 (224-270)||(21835306-21835352)
chr7 (224-270)||(22696476-22696522)
chr7 (224-270)||(23092251-23092297)
chr7 (224-270)||(27312307-27312353)
chr7 (225-270)||(19421386-19421431)
chr7 (225-270)||(32849746-32849791)
chr7 (224-267)||(13332434-13332477)
chr7 (224-270)||(2344454-2344500)
chr7 (224-270)||(21217833-21217879)
chr7 (224-270)||(21574102-21574148)
chr7 (224-270)||(22703641-22703687)
chr7 (224-270)||(25333558-25333603)
chr7 (224-270)||(27704156-27704202)
chr7 (224-270)||(31197745-31197791)
chr7 (224-270)||(31274068-31274114)
chr7 (224-270)||(39145652-39145698)
chr7 (224-270)||(42913513-42913559)
chr7 (229-270)||(1766149-1766190)
chr7 (224-257)||(41907514-41907547)
chr7 (225-261)||(22638452-22638488)
[»] chr6 (18 HSPs)
chr6 (224-270)||(9690638-9690684)
chr6 (224-270)||(21148511-21148557)
chr6 (224-270)||(3222636-3222682)
chr6 (224-270)||(11449022-11449068)
chr6 (224-270)||(14213033-14213079)
chr6 (224-270)||(15360098-15360144)
chr6 (224-270)||(34147497-34147543)
chr6 (224-270)||(34160113-34160159)
chr6 (225-270)||(9239126-9239171)
chr6 (224-270)||(654146-654192)
chr6 (224-270)||(1345086-1345132)
chr6 (224-270)||(21982321-21982366)
chr6 (224-270)||(28672218-28672264)
chr6 (224-265)||(13753347-13753388)
chr6 (224-270)||(5360071-5360117)
chr6 (224-270)||(9844089-9844135)
chr6 (224-270)||(14504082-14504128)
chr6 (224-256)||(7491666-7491698)
[»] chr4 (34 HSPs)
chr4 (224-270)||(34723950-34723996)
chr4 (224-270)||(23639775-23639821)
chr4 (224-270)||(23645433-23645479)
chr4 (224-270)||(27528795-27528841)
chr4 (224-270)||(34844758-34844804)
chr4 (224-270)||(40058852-40058898)
chr4 (224-270)||(44343665-44343711)
chr4 (224-270)||(46714544-46714590)
chr4 (225-270)||(52983770-52983815)
chr4 (225-269)||(45302988-45303032)
chr4 (224-270)||(5609202-5609248)
chr4 (224-270)||(17637852-17637897)
chr4 (224-270)||(19660532-19660578)
chr4 (224-270)||(32986348-32986394)
chr4 (224-270)||(33696279-33696325)
chr4 (224-270)||(37302638-37302684)
chr4 (224-270)||(43719087-43719133)
chr4 (224-270)||(45787704-45787750)
chr4 (224-270)||(52494639-52494685)
chr4 (224-261)||(6204181-6204218)
chr4 (226-261)||(20077986-20078021)
chr4 (224-270)||(20566501-20566547)
chr4 (224-270)||(23131436-23131482)
chr4 (224-270)||(25852366-25852412)
chr4 (224-266)||(33289209-33289251)
chr4 (224-270)||(35229319-35229365)
chr4 (224-262)||(35674749-35674786)
chr4 (224-270)||(49288008-49288054)
chr4 (224-270)||(55158343-55158389)
chr4 (233-270)||(9517650-9517687)
chr4 (225-270)||(25969504-25969548)
chr4 (224-268)||(21387487-21387531)
chr4 (224-256)||(24672305-24672337)
chr4 (224-260)||(51595183-51595219)
[»] chr3 (41 HSPs)
chr3 (224-270)||(8456150-8456196)
chr3 (224-270)||(3747732-3747778)
chr3 (224-270)||(8097279-8097325)
chr3 (224-270)||(10083819-10083865)
chr3 (224-270)||(10190742-10190788)
chr3 (224-270)||(24407412-24407458)
chr3 (224-270)||(26174264-26174310)
chr3 (224-270)||(39041852-39041898)
chr3 (224-270)||(49258262-49258308)
chr3 (224-270)||(52821636-52821682)
chr3 (224-270)||(53424177-53424223)
chr3 (224-270)||(53848434-53848480)
chr3 (224-271)||(48972714-48972761)
chr3 (224-270)||(4048101-4048147)
chr3 (224-270)||(7485531-7485576)
chr3 (224-270)||(15566500-15566546)
chr3 (224-270)||(24165715-24165761)
chr3 (224-258)||(26108441-26108475)
chr3 (224-270)||(30257775-30257821)
chr3 (224-270)||(30807153-30807198)
chr3 (224-270)||(32151575-32151621)
chr3 (224-270)||(40133449-40133495)
chr3 (224-270)||(45529755-45529800)
chr3 (224-270)||(46576499-46576545)
chr3 (224-270)||(52455649-52455695)
chr3 (224-270)||(53233911-53233956)
chr3 (224-257)||(1692997-1693030)
chr3 (225-270)||(25379912-25379957)
chr3 (225-270)||(48105028-48105073)
chr3 (224-270)||(1178322-1178367)
chr3 (224-270)||(18176887-18176933)
chr3 (224-270)||(21363094-21363140)
chr3 (224-270)||(25289715-25289760)
chr3 (224-270)||(32094757-32094803)
chr3 (224-270)||(35493062-35493108)
chr3 (224-270)||(45272416-45272462)
chr3 (224-270)||(48977539-48977585)
chr3 (224-270)||(50731237-50731283)
chr3 (224-270)||(50781571-50781617)
chr3 (224-270)||(54475832-54475878)
chr3 (224-261)||(11390762-11390799)
[»] chr2 (26 HSPs)
chr2 (224-270)||(35171951-35171997)
chr2 (224-270)||(11941210-11941256)
chr2 (224-270)||(25293310-25293356)
chr2 (224-270)||(44946053-44946099)
chr2 (224-270)||(1501464-1501509)
chr2 (224-270)||(2140486-2140532)
chr2 (224-270)||(4567429-4567475)
chr2 (224-270)||(15038110-15038156)
chr2 (224-270)||(18692111-18692157)
chr2 (224-270)||(19054177-19054223)
chr2 (224-266)||(27290729-27290771)
chr2 (224-270)||(28669024-28669070)
chr2 (224-270)||(30466830-30466876)
chr2 (224-270)||(33827573-33827619)
chr2 (224-270)||(34516414-34516460)
chr2 (224-270)||(43374330-43374376)
chr2 (224-269)||(8299859-8299904)
chr2 (231-270)||(45132438-45132477)
chr2 (224-270)||(14486976-14487022)
chr2 (224-270)||(18976455-18976501)
chr2 (224-270)||(27269344-27269390)
chr2 (224-270)||(31778182-31778228)
chr2 (224-270)||(36390569-36390614)
chr2 (224-270)||(39957909-39957955)
chr2 (224-270)||(44929846-44929892)
chr2 (224-260)||(8259058-8259094)
[»] scaffold0576 (1 HSPs)
scaffold0576 (224-270)||(5082-5128)
[»] chr8 (29 HSPs)
chr8 (224-270)||(2639411-2639457)
chr8 (224-270)||(3734623-3734669)
chr8 (224-270)||(4718800-4718846)
chr8 (224-270)||(8765526-8765572)
chr8 (224-270)||(9713609-9713655)
chr8 (224-270)||(21603385-21603431)
chr8 (224-270)||(34237655-34237701)
chr8 (225-270)||(28193629-28193674)
chr8 (224-271)||(33747036-33747083)
chr8 (224-271)||(34610687-34610734)
chr8 (224-270)||(2618341-2618387)
chr8 (224-270)||(32879434-32879480)
chr8 (224-270)||(42328159-42328205)
chr8 (224-270)||(4698723-4698769)
chr8 (224-270)||(6953008-6953053)
chr8 (224-270)||(14633109-14633155)
chr8 (225-271)||(15259407-15259453)
chr8 (224-270)||(18128668-18128714)
chr8 (224-258)||(18532265-18532299)
chr8 (224-270)||(19471765-19471811)
chr8 (224-270)||(19542689-19542735)
chr8 (224-270)||(19589961-19590007)
chr8 (224-270)||(20306063-20306109)
chr8 (224-270)||(21092696-21092742)
chr8 (224-270)||(25248502-25248547)
chr8 (224-270)||(39349411-39349457)
chr8 (224-270)||(42643118-42643164)
chr8 (225-270)||(7557952-7557997)
chr8 (224-261)||(20470080-20470117)
[»] chr1 (25 HSPs)
chr1 (224-270)||(4621237-4621283)
chr1 (224-270)||(7766727-7766773)
chr1 (224-270)||(14603947-14603993)
chr1 (224-270)||(24122174-24122220)
chr1 (225-270)||(17935920-17935965)
chr1 (224-271)||(23734267-23734314)
chr1 (224-271)||(23741459-23741506)
chr1 (224-270)||(5315482-5315528)
chr1 (224-270)||(7197247-7197293)
chr1 (224-270)||(15059402-15059448)
chr1 (224-270)||(23041673-23041719)
chr1 (224-270)||(27454864-27454910)
chr1 (224-270)||(40802069-40802115)
chr1 (225-270)||(34778490-34778535)
chr1 (224-256)||(8254752-8254784)
chr1 (224-268)||(26513148-26513192)
chr1 (224-270)||(24674544-24674590)
chr1 (224-270)||(31162901-31162947)
chr1 (229-270)||(18647004-18647045)
chr1 (225-270)||(37351454-37351499)
chr1 (232-269)||(40145889-40145926)
chr1 (224-257)||(45331621-45331654)
chr1 (224-260)||(9500355-9500391)
chr1 (224-256)||(36155888-36155920)
chr1 (224-260)||(48699920-48699956)
[»] scaffold0026 (1 HSPs)
scaffold0026 (225-269)||(2478-2522)
[»] scaffold0217 (1 HSPs)
scaffold0217 (224-270)||(7309-7355)
[»] scaffold0199 (1 HSPs)
scaffold0199 (224-270)||(8451-8497)
[»] scaffold0102 (1 HSPs)
scaffold0102 (224-270)||(39243-39289)
[»] scaffold0070 (1 HSPs)
scaffold0070 (224-270)||(40476-40521)
[»] scaffold0019 (1 HSPs)
scaffold0019 (224-270)||(161960-162006)
[»] scaffold0016 (1 HSPs)
scaffold0016 (224-270)||(32439-32484)
[»] scaffold1175 (1 HSPs)
scaffold1175 (224-270)||(2426-2472)
[»] scaffold0623 (1 HSPs)
scaffold0623 (224-270)||(1057-1102)
[»] scaffold0366 (1 HSPs)
scaffold0366 (224-270)||(9300-9345)
[»] scaffold0068 (1 HSPs)
scaffold0068 (224-270)||(41645-41690)
[»] scaffold0049 (1 HSPs)
scaffold0049 (224-270)||(66905-66951)
[»] scaffold0008 (1 HSPs)
scaffold0008 (224-260)||(265880-265915)


Alignment Details
Target: chr5 (Bit Score: 187; Significance: 1e-101; HSPs: 35)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 1 - 195
Target Start/End: Complemental strand, 13651538 - 13651344
Alignment:
Q  1 tcagtgtttaggaatgttatgtgaagattttgaattaaaagaagttcagctagcttgagcattgtgtttacatggccttgtgctggacatgggaagatta 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13651538 tcagtgtttaggaatgttatgtgaagattttgaattaaaagaagttcagctagcttgagcattgtgtttacatggccttgtgctggacatgggaagatta 13651439  T
Q  101 acacatgcggtgtttccatttttctacaatctcaattttgtgatctataggataagataagatgctatttggtagtagcattttatagtgtttgt 195  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  13651438 acacatgcggtgtttccatttttcaacaatctcaattttgtgatctataggataagataagatgctatttggtagtagctttttatagtgtttgt 13651344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 28 - 107
Target Start/End: Complemental strand, 13646433 - 13646354
Alignment:
Q  28 ttttgaattaaaagaagttcagctagcttgagcattgtgtttacatggccttgtgctggacatgggaagattaacacatg 107  Q
    |||||||||  |||||||||||||||||| |||||||  |||||||||||||||||||||||||||||||||| ||||||    
T  13646433 ttttgaattgcaagaagttcagctagctttagcattgaatttacatggccttgtgctggacatgggaagattagcacatg 13646354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 28 - 107
Target Start/End: Complemental strand, 13656759 - 13656680
Alignment:
Q  28 ttttgaattaaaagaagttcagctagcttgagcattgtgtttacatggccttgtgctggacatgggaagattaacacatg 107  Q
    |||||||||  |||||||||||||||||| |||||||  |||||||||||||||||||||||||||||||||| ||||||    
T  13656759 ttttgaattgcaagaagttcagctagctttagcattggatttacatggccttgtgctggacatgggaagattagcacatg 13656680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 224 - 270
Target Start/End: Original strand, 7085626 - 7085672
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||    
T  7085626 aaaactcggtatccgattcaagaatcgactaatccgaggggaccaat 7085672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 224 - 270
Target Start/End: Original strand, 8484661 - 8484707
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    ||||||||||||||||| |||||||||||||||||||| ||||||||    
T  8484661 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaat 8484707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 224 - 270
Target Start/End: Original strand, 10631289 - 10631335
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    ||||||||||||||||| |||||||||||||||||||| ||||||||    
T  10631289 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaat 10631335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 224 - 270
Target Start/End: Original strand, 11926501 - 11926547
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    ||||||||||||||||| |||||||||||||||||||| ||||||||    
T  11926501 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaat 11926547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 224 - 270
Target Start/End: Complemental strand, 18207404 - 18207358
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    ||||||||||||||||| |||||||||||||||||||| ||||||||    
T  18207404 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaat 18207358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 224 - 270
Target Start/End: Original strand, 19456211 - 19456257
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    ||||||||||||||||| |||||||||||||||||||| ||||||||    
T  19456211 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaat 19456257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 224 - 270
Target Start/End: Complemental strand, 22693132 - 22693086
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    ||||||||||||||||| |||||||||||||||||||| ||||||||    
T  22693132 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaat 22693086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 224 - 270
Target Start/End: Original strand, 27498731 - 27498777
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    ||||||||||||||||| |||||||||||||||||||| ||||||||    
T  27498731 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaat 27498777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 224 - 270
Target Start/End: Complemental strand, 35425210 - 35425164
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    |||| |||||||||||| |||||||||||||||||||||||||||||    
T  35425210 aaaattcggtatccgatccaagaatcgactaatccgagaggaccaat 35425164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 224 - 270
Target Start/End: Complemental strand, 37495251 - 37495205
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    ||||||||||||||||| |||||||||||||||||||| ||||||||    
T  37495251 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaat 37495205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 224 - 270
Target Start/End: Original strand, 41351104 - 41351150
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    ||||||||||||||||| |||||||||||||||||||| ||||||||    
T  41351104 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaat 41351150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 224 - 270
Target Start/End: Original strand, 15641106 - 15641151
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    ||||||||||||||||| |||||||||||||||||||| ||||||||    
T  15641106 aaaactcggtatccgat-caagaatcgactaatccgaggggaccaat 15641151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 224 - 266
Target Start/End: Original strand, 21236362 - 21236404
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggac 266  Q
    |||||||||||||||||||||||||||||||||| ||| ||||    
T  21236362 aaaactcggtatccgattcaagaatcgactaatctgaggggac 21236404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 224 - 270
Target Start/End: Original strand, 27487554 - 27487600
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    ||||||| ||||||||| |||||||||||||||||||| ||||||||    
T  27487554 aaaactctgtatccgatccaagaatcgactaatccgaggggaccaat 27487600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 224 - 270
Target Start/End: Complemental strand, 30486025 - 30485979
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    ||||||||||||||||| ||||||| |||||||||||| ||||||||    
T  30486025 aaaactcggtatccgatccaagaattgactaatccgaggggaccaat 30485979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 224 - 270
Target Start/End: Original strand, 33709503 - 33709549
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    ||||| ||||||||||| |||||||||||||||||||| ||||||||    
T  33709503 aaaacacggtatccgatccaagaatcgactaatccgaggggaccaat 33709549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 224 - 270
Target Start/End: Original strand, 38630979 - 38631025
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    ||||||||||||||||| |||||||||| ||||||||| ||||||||    
T  38630979 aaaactcggtatccgatccaagaatcgattaatccgaggggaccaat 38631025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 224 - 270
Target Start/End: Complemental strand, 38684404 - 38684358
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    |||| |||||||||||| |||||||||||||||||||| ||||||||    
T  38684404 aaaaatcggtatccgatccaagaatcgactaatccgaggggaccaat 38684358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 224 - 260
Target Start/End: Complemental strand, 41084180 - 41084144
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccga 260  Q
    |||||||||||||||||||||||| ||||||||||||    
T  41084180 aaaactcggtatccgattcaagaaccgactaatccga 41084144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 224 - 271
Target Start/End: Complemental strand, 7151500 - 7151453
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaatt 271  Q
    ||||||||||||||||| ||||||||||||||| | || |||||||||    
T  7151500 aaaactcggtatccgatccaagaatcgactaattctaggggaccaatt 7151453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 224 - 271
Target Start/End: Complemental strand, 22392885 - 22392838
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaatt 271  Q
    ||||||||||||||||| ||| |||||||||||| ||| |||||||||    
T  22392885 aaaactcggtatccgatccaaaaatcgactaatctgaggggaccaatt 22392838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 270
Target Start/End: Complemental strand, 4603974 - 4603928
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    ||||||||||||||||| |||| | ||||||||||||| ||||||||    
T  4603974 aaaactcggtatccgatccaaggaccgactaatccgaggggaccaat 4603928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 270
Target Start/End: Original strand, 10869565 - 10869611
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    |||||| |||||||||| |||||| ||||||||||||| ||||||||    
T  10869565 aaaacttggtatccgatccaagaaccgactaatccgaggggaccaat 10869611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 270
Target Start/End: Original strand, 19145412 - 19145458
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    ||||||||||||||||| |||||| | ||||||||||| ||||||||    
T  19145412 aaaactcggtatccgatccaagaaccaactaatccgaggggaccaat 19145458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 270
Target Start/End: Original strand, 25548534 - 25548580
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    |||||||||||| |||| ||||||||||||||| ||||| |||||||    
T  25548534 aaaactcggtattcgatccaagaatcgactaattcgagatgaccaat 25548580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 270
Target Start/End: Original strand, 25750613 - 25750659
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    ||||||||||||||||| |||||||||||||||| ||  ||||||||    
T  25750613 aaaactcggtatccgatccaagaatcgactaatctgaagggaccaat 25750659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 270
Target Start/End: Original strand, 32059440 - 32059486
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    ||||||||||||||||| |||| | ||||||||||||| ||||||||    
T  32059440 aaaactcggtatccgatccaaggaccgactaatccgaggggaccaat 32059486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 270
Target Start/End: Complemental strand, 33737938 - 33737893
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    |||||||||||||||||||||||||| ||||| ||||| ||||||||    
T  33737938 aaaactcggtatccgattcaagaatcaactaa-ccgaggggaccaat 33737893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 270
Target Start/End: Complemental strand, 34050008 - 34049962
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    ||||||||||||||||||  |||||| ||||||||||| ||||||||    
T  34050008 aaaactcggtatccgatttgagaatcaactaatccgaggggaccaat 34049962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 270
Target Start/End: Complemental strand, 34310339 - 34310293
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    ||||||||||||||||| |||||||||| |||| |||| ||||||||    
T  34310339 aaaactcggtatccgatccaagaatcgattaattcgaggggaccaat 34310293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 270
Target Start/End: Original strand, 11464913 - 11464954
Alignment:
Q  229 tcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    |||||||||||| ||||||||||||||| |||| ||||||||    
T  11464913 tcggtatccgatccaagaatcgactaattcgaggggaccaat 11464954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 233 - 269
Target Start/End: Complemental strand, 42193671 - 42193635
Alignment:
Q  233 tatccgattcaagaatcgactaatccgagaggaccaa 269  Q
    |||| ||| ||||||||||||||||||||||||||||    
T  42193671 tatctgatccaagaatcgactaatccgagaggaccaa 42193635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 47; Significance: 8e-18; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 224 - 270
Target Start/End: Original strand, 52871 - 52917
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  52871 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 52917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 46; Significance: 3e-17; HSPs: 36)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 224 - 269
Target Start/End: Complemental strand, 22300003 - 22299958
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaa 269  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  22300003 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaa 22299958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 224 - 270
Target Start/End: Complemental strand, 2751472 - 2751426
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    ||||||||||||||||| |||||||||||||||||||| ||||||||    
T  2751472 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaat 2751426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 224 - 270
Target Start/End: Complemental strand, 7275478 - 7275432
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    ||||||||||||||||| |||||||||||||||||||| ||||||||    
T  7275478 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaat 7275432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 224 - 270
Target Start/End: Complemental strand, 16374195 - 16374149
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    ||||||||||||||||| |||||||||||||||||||| ||||||||    
T  16374195 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaat 16374149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 224 - 270
Target Start/End: Complemental strand, 22120089 - 22120043
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    ||||||||||||||||| |||||||||||||||||||| ||||||||    
T  22120089 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaat 22120043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 224 - 270
Target Start/End: Complemental strand, 28090020 - 28089974
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    ||||||||||||||||| |||||||||||||||||||| ||||||||    
T  28090020 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaat 28089974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 224 - 270
Target Start/End: Original strand, 31712902 - 31712948
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    ||||||||||||||||| |||||||||||||||||||| ||||||||    
T  31712902 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaat 31712948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 224 - 270
Target Start/End: Original strand, 40542910 - 40542956
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    ||||||||||||||||| |||||||||||||||||||| ||||||||    
T  40542910 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaat 40542956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 224 - 271
Target Start/End: Complemental strand, 18044308 - 18044261
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaatt 271  Q
    ||||||||||||||||| |||||||||||||||| ||| |||||||||    
T  18044308 aaaactcggtatccgatccaagaatcgactaatctgaggggaccaatt 18044261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 224 - 271
Target Start/End: Complemental strand, 36395547 - 36395500
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaatt 271  Q
    |||| ||||||||| || ||||||||||||||||||||||||||||||    
T  36395547 aaaattcggtatccaatccaagaatcgactaatccgagaggaccaatt 36395500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 224 - 271
Target Start/End: Original strand, 36772303 - 36772350
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaatt 271  Q
    |||||||||||||||||  |||||||||||||||||||||||| ||||    
T  36772303 aaaactcggtatccgatcaaagaatcgactaatccgagaggactaatt 36772350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 224 - 270
Target Start/End: Original strand, 654705 - 654751
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    ||||||||||||||||| |||||| ||||||||||||| ||||||||    
T  654705 aaaactcggtatccgatccaagaaccgactaatccgaggggaccaat 654751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 224 - 270
Target Start/End: Complemental strand, 3851958 - 3851912
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    ||||||||||||||||| |||||||||||||||||||| ||| ||||    
T  3851958 aaaactcggtatccgatccaagaatcgactaatccgaggggatcaat 3851912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 224 - 270
Target Start/End: Original strand, 7175862 - 7175908
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    ||||||| ||||||||| |||||||||||||||||||| ||||||||    
T  7175862 aaaactcagtatccgatccaagaatcgactaatccgaggggaccaat 7175908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 224 - 270
Target Start/End: Complemental strand, 11998050 - 11998004
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    ||||||||||||||||| ||||||||||||||| |||| ||||||||    
T  11998050 aaaactcggtatccgatccaagaatcgactaattcgaggggaccaat 11998004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 224 - 270
Target Start/End: Original strand, 17196950 - 17196996
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    ||||||||||||||||| ||||||||||||||| |||| ||||||||    
T  17196950 aaaactcggtatccgatccaagaatcgactaattcgaggggaccaat 17196996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 224 - 270
Target Start/End: Complemental strand, 21835352 - 21835306
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    |||||||| |||||||| |||||||||||||||||||| ||||||||    
T  21835352 aaaactcgatatccgatccaagaatcgactaatccgaggggaccaat 21835306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 224 - 270
Target Start/End: Complemental strand, 22696522 - 22696476
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    ||||||||||||||||| |||| | ||||||||||||||||||||||    
T  22696522 aaaactcggtatccgatccaaggaccgactaatccgagaggaccaat 22696476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 224 - 270
Target Start/End: Complemental strand, 23092297 - 23092251
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    ||||||||||||||||| || ||||||||||||||||| ||||||||    
T  23092297 aaaactcggtatccgatccatgaatcgactaatccgaggggaccaat 23092251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 224 - 270
Target Start/End: Complemental strand, 27312353 - 27312307
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    ||||||||||||||||| |||||||||||||||| ||| ||||||||    
T  27312353 aaaactcggtatccgatccaagaatcgactaatctgaggggaccaat 27312307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 225 - 270
Target Start/End: Complemental strand, 19421431 - 19421386
Alignment:
Q  225 aaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    |||||||||||| ||||||||||||||||||||||||  |||||||    
T  19421431 aaactcggtatctgattcaagaatcgactaatccgaggagaccaat 19421386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 225 - 270
Target Start/End: Complemental strand, 32849791 - 32849746
Alignment:
Q  225 aaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    |||||||||||||||| |||||||||||||||| ||| ||||||||    
T  32849791 aaactcggtatccgatccaagaatcgactaatctgaggggaccaat 32849746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 224 - 267
Target Start/End: Original strand, 13332434 - 13332477
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggacc 267  Q
    ||||||||||||| ||| |||||||||||||||||||| |||||    
T  13332434 aaaactcggtatctgatccaagaatcgactaatccgagtggacc 13332477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 270
Target Start/End: Complemental strand, 2344500 - 2344454
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    ||||||||||||||||| |||| | ||||||||||||| ||||||||    
T  2344500 aaaactcggtatccgatccaaggaccgactaatccgaggggaccaat 2344454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 270
Target Start/End: Original strand, 21217833 - 21217879
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    ||||||||||||||||| |||||||| ||||||||||| ||| ||||    
T  21217833 aaaactcggtatccgatccaagaatcaactaatccgaggggatcaat 21217879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 270
Target Start/End: Original strand, 21574102 - 21574148
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    ||||||||||||||||| |||| | ||||||||||||| ||||||||    
T  21574102 aaaactcggtatccgatccaaggaccgactaatccgaggggaccaat 21574148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 270
Target Start/End: Complemental strand, 22703687 - 22703641
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    |||||| ||||||||||  ||||||||||||||||||| ||||||||    
T  22703687 aaaactgggtatccgatcaaagaatcgactaatccgaggggaccaat 22703641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 270
Target Start/End: Complemental strand, 25333603 - 25333558
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    |||||||||| |||||| |||||||||||||||||||| ||||||||    
T  25333603 aaaactcggt-tccgatccaagaatcgactaatccgaggggaccaat 25333558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 270
Target Start/End: Complemental strand, 27704202 - 27704156
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    ||||||||||||| |||||||||||||||||||| ||| ||| ||||    
T  27704202 aaaactcggtatctgattcaagaatcgactaatctgaggggatcaat 27704156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 270
Target Start/End: Complemental strand, 31197791 - 31197745
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    |||||||| |||||||| |||||||||||||||| ||| ||||||||    
T  31197791 aaaactcgatatccgatccaagaatcgactaatctgaggggaccaat 31197745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 270
Target Start/End: Complemental strand, 31274114 - 31274068
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    ||||||||||||||| | ||||||||||||||| |||| ||||||||    
T  31274114 aaaactcggtatccggtccaagaatcgactaattcgaggggaccaat 31274068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 270
Target Start/End: Original strand, 39145652 - 39145698
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    |||||| |||||| ||||||||||||||||||| |||| ||||||||    
T  39145652 aaaacttggtatctgattcaagaatcgactaattcgaggggaccaat 39145698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 270
Target Start/End: Original strand, 42913513 - 42913559
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    |||||||||||||||||  ||||||| ||||||||||| ||||||||    
T  42913513 aaaactcggtatccgatctaagaatcaactaatccgaggggaccaat 42913559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 270
Target Start/End: Original strand, 1766149 - 1766190
Alignment:
Q  229 tcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    ||||||||||||||||| | ||||||||||||| ||||||||    
T  1766149 tcggtatccgattcaagtaccgactaatccgaggggaccaat 1766190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 257
Target Start/End: Original strand, 41907514 - 41907547
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatc 257  Q
    ||||||||||||||||| ||||||||||||||||    
T  41907514 aaaactcggtatccgatccaagaatcgactaatc 41907547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 225 - 261
Target Start/End: Complemental strand, 22638488 - 22638452
Alignment:
Q  225 aaactcggtatccgattcaagaatcgactaatccgag 261  Q
    |||||||||||||||| ||||||||||||||| ||||    
T  22638488 aaactcggtatccgatccaagaatcgactaattcgag 22638452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 224 - 270
Target Start/End: Original strand, 9690638 - 9690684
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||    
T  9690638 aaaactcggtatccgatccaagaatcgactaatccgagaggaccaat 9690684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 224 - 270
Target Start/End: Original strand, 21148511 - 21148557
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||    
T  21148511 aaaactcggtatccgattcaagaatcgactaatccgaggggaccaat 21148557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 224 - 270
Target Start/End: Original strand, 3222636 - 3222682
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    ||||||||||||||||| |||||||||||||||||||| ||||||||    
T  3222636 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaat 3222682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 224 - 270
Target Start/End: Complemental strand, 11449068 - 11449022
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    |||||||| ||||||||||||||||||||||||||||| ||||||||    
T  11449068 aaaactcgatatccgattcaagaatcgactaatccgaggggaccaat 11449022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 224 - 270
Target Start/End: Complemental strand, 14213079 - 14213033
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    ||||||||||||||||| |||||||||||||||||||| ||||||||    
T  14213079 aaaactcggtatccgatccaagaatcgactaatccgagtggaccaat 14213033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 224 - 270
Target Start/End: Original strand, 15360098 - 15360144
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    ||||||||||||||||| |||||||||||||||||||| ||||||||    
T  15360098 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaat 15360144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 224 - 270
Target Start/End: Complemental strand, 34147543 - 34147497
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    ||||||||||||||||| |||||||||||||||||||| ||||||||    
T  34147543 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaat 34147497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 224 - 270
Target Start/End: Complemental strand, 34160159 - 34160113
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    ||||||||||||||||| |||||||||||||||||||| ||||||||    
T  34160159 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaat 34160113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 225 - 270
Target Start/End: Complemental strand, 9239171 - 9239126
Alignment:
Q  225 aaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    |||||||||||||||| |||||||||||||||||||| ||||||||    
T  9239171 aaactcggtatccgatccaagaatcgactaatccgaggggaccaat 9239126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 224 - 270
Target Start/End: Original strand, 654146 - 654192
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    ||||||||||||||||| ||| |||||||||||||||| ||||||||    
T  654146 aaaactcggtatccgatccaataatcgactaatccgaggggaccaat 654192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 224 - 270
Target Start/End: Complemental strand, 1345132 - 1345086
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    ||||||||||||||||| ||||||||||||||||| || ||||||||    
T  1345132 aaaactcggtatccgatccaagaatcgactaatccaaggggaccaat 1345086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 224 - 270
Target Start/End: Original strand, 21982321 - 21982366
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    ||||||||||||||||| |||||||||||||||||||| ||||||||    
T  21982321 aaaactcggtatccgatccaagaatcgactaatccgag-ggaccaat 21982366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 224 - 270
Target Start/End: Complemental strand, 28672264 - 28672218
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    ||||||||||||| ||| |||||||||||||||||||| ||||||||    
T  28672264 aaaactcggtatctgatccaagaatcgactaatccgaggggaccaat 28672218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 224 - 265
Target Start/End: Complemental strand, 13753388 - 13753347
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagagga 265  Q
    |||||||||||||| |||||||||||||||||| ||||||||    
T  13753388 aaaactcggtatccaattcaagaatcgactaattcgagagga 13753347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 270
Target Start/End: Original strand, 5360071 - 5360117
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    |||||||||||||||||  |||||||||||||| |||| ||||||||    
T  5360071 aaaactcggtatccgatctaagaatcgactaattcgaggggaccaat 5360117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 270
Target Start/End: Complemental strand, 9844135 - 9844089
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    |||||||| |||||||| |||||||||||||||||||  ||||||||    
T  9844135 aaaactcgatatccgatccaagaatcgactaatccgaagggaccaat 9844089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 270
Target Start/End: Original strand, 14504082 - 14504128
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    ||||||||||||||||| |||| |||||||||| |||||||| ||||    
T  14504082 aaaactcggtatccgatacaaggatcgactaattcgagaggatcaat 14504128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 256
Target Start/End: Original strand, 7491666 - 7491698
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaat 256  Q
    ||||||||||||||||| |||||||||||||||    
T  7491666 aaaactcggtatccgatccaagaatcgactaat 7491698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 34)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 224 - 270
Target Start/End: Complemental strand, 34723996 - 34723950
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||    
T  34723996 aaaactcggtatccgatccaagaatcgactaatccgagaggaccaat 34723950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 224 - 270
Target Start/End: Complemental strand, 23639821 - 23639775
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    ||||||||||||||||| |||||||||||||||||||| ||||||||    
T  23639821 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaat 23639775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 224 - 270
Target Start/End: Complemental strand, 23645479 - 23645433
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    ||||||||||||||||| |||||||||||||||||||| ||||||||    
T  23645479 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaat 23645433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 224 - 270
Target Start/End: Original strand, 27528795 - 27528841
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    ||||||||||||||||| |||||||||||||||||||| ||||||||    
T  27528795 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaat 27528841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 224 - 270
Target Start/End: Original strand, 34844758 - 34844804
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    ||||||||||||||||| |||||||||||||||||||| ||||||||    
T  34844758 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaat 34844804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 224 - 270
Target Start/End: Original strand, 40058852 - 40058898
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    ||||||||||||||||| |||||||||||||||||||| ||||||||    
T  40058852 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaat 40058898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 224 - 270
Target Start/End: Complemental strand, 44343711 - 44343665
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    ||||||||||||||||||||||||||||||||| |||| ||||||||    
T  44343711 aaaactcggtatccgattcaagaatcgactaattcgaggggaccaat 44343665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 224 - 270
Target Start/End: Complemental strand, 46714590 - 46714544
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    ||||||||||||||||||||||||| |||||||||||| ||||||||    
T  46714590 aaaactcggtatccgattcaagaattgactaatccgaggggaccaat 46714544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 225 - 270
Target Start/End: Complemental strand, 52983815 - 52983770
Alignment:
Q  225 aaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    |||||||||||||||| |||||||||||||||||||| ||||||||    
T  52983815 aaactcggtatccgatccaagaatcgactaatccgaggggaccaat 52983770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 225 - 269
Target Start/End: Complemental strand, 45303032 - 45302988
Alignment:
Q  225 aaactcggtatccgattcaagaatcgactaatccgagaggaccaa 269  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||    
T  45303032 aaactcggtatccgattcaagaattgactaatccgagatgaccaa 45302988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 224 - 270
Target Start/End: Original strand, 5609202 - 5609248
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    ||||||||||||||||| |||||||||||||||||||| ||| ||||    
T  5609202 aaaactcggtatccgatccaagaatcgactaatccgaggggatcaat 5609248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 224 - 270
Target Start/End: Original strand, 17637852 - 17637897
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    ||||||||||||||||| |||||||||||||||||||| ||||||||    
T  17637852 aaaactcggtatccgat-caagaatcgactaatccgaggggaccaat 17637897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 224 - 270
Target Start/End: Original strand, 19660532 - 19660578
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    ||||||||||||||||| |||||||||||||||||||| ||| ||||    
T  19660532 aaaactcggtatccgatccaagaatcgactaatccgaggggatcaat 19660578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 224 - 270
Target Start/End: Complemental strand, 32986394 - 32986348
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    ||||||||||||||||| ||||||||||||| |||||| ||||||||    
T  32986394 aaaactcggtatccgatccaagaatcgactattccgaggggaccaat 32986348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 224 - 270
Target Start/End: Original strand, 33696279 - 33696325
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    |||||||| |||||||| ||||||| |||||||||||||||||||||    
T  33696279 aaaactcgatatccgatccaagaattgactaatccgagaggaccaat 33696325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 224 - 270
Target Start/End: Complemental strand, 37302684 - 37302638
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    |||| ||||||||||||||||||||||||||||||||  ||||||||    
T  37302684 aaaattcggtatccgattcaagaatcgactaatccgaagggaccaat 37302638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 224 - 270
Target Start/End: Original strand, 43719087 - 43719133
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    |||| |||||||||||| ||||||||||||||||||||| |||||||    
T  43719087 aaaattcggtatccgatccaagaatcgactaatccgagatgaccaat 43719133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 224 - 270
Target Start/End: Original strand, 45787704 - 45787750
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    ||||||||||||||||| ||||||||||||||| |||| ||||||||    
T  45787704 aaaactcggtatccgatccaagaatcgactaattcgaggggaccaat 45787750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 224 - 270
Target Start/End: Complemental strand, 52494685 - 52494639
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    ||||||||||||||||| ||||||||||||||| |||| ||||||||    
T  52494685 aaaactcggtatccgatccaagaatcgactaattcgaggggaccaat 52494639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 224 - 261
Target Start/End: Original strand, 6204181 - 6204218
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgag 261  Q
    ||||||| ||||||||||||||||||||||||||||||    
T  6204181 aaaactcagtatccgattcaagaatcgactaatccgag 6204218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 226 - 261
Target Start/End: Original strand, 20077986 - 20078021
Alignment:
Q  226 aactcggtatccgattcaagaatcgactaatccgag 261  Q
    ||||||||||||||| ||||||||||||||||||||    
T  20077986 aactcggtatccgatccaagaatcgactaatccgag 20078021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 270
Target Start/End: Complemental strand, 20566547 - 20566501
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    |||||||| |||||||| |||||||||||||||| ||| ||||||||    
T  20566547 aaaactcgatatccgatccaagaatcgactaatctgaggggaccaat 20566501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 270
Target Start/End: Original strand, 23131436 - 23131482
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    |||||||||||||||||  |||||||||||||| |||| ||||||||    
T  23131436 aaaactcggtatccgatcgaagaatcgactaattcgaggggaccaat 23131482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 270
Target Start/End: Complemental strand, 25852412 - 25852366
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    ||||||||||||||| | |||||| ||||||||||||| ||||||||    
T  25852412 aaaactcggtatccggtccaagaaccgactaatccgaggggaccaat 25852366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 266
Target Start/End: Complemental strand, 33289251 - 33289209
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggac 266  Q
    ||||| ||||||||||| |||||||||||||||||||| ||||    
T  33289251 aaaacccggtatccgatccaagaatcgactaatccgaggggac 33289209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 270
Target Start/End: Complemental strand, 35229365 - 35229319
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    |||| |||||||||||| ||||||||||||||| |||| ||||||||    
T  35229365 aaaattcggtatccgatccaagaatcgactaattcgaggggaccaat 35229319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 262
Target Start/End: Original strand, 35674749 - 35674786
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgaga 262  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  35674749 aaaactcggtatccgat-caagaatcgactaatccgaga 35674786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 270
Target Start/End: Complemental strand, 49288054 - 49288008
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    ||||||| ||||| ||| |||||||||||||||||||| ||||||||    
T  49288054 aaaactcagtatctgatccaagaatcgactaatccgaggggaccaat 49288008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 270
Target Start/End: Original strand, 55158343 - 55158389
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    |||||||||| |||||| ||| |||||||||||||||| ||||||||    
T  55158343 aaaactcggtttccgatccaaaaatcgactaatccgaggggaccaat 55158389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 233 - 270
Target Start/End: Original strand, 9517650 - 9517687
Alignment:
Q  233 tatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    |||||||| |||||||||||||||||||| ||||||||    
T  9517650 tatccgatccaagaatcgactaatccgaggggaccaat 9517687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 270
Target Start/End: Original strand, 25969504 - 25969548
Alignment:
Q  225 aaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    |||||| ||||||||||||||||||||||||| |||| ||||||||    
T  25969504 aaactcagtatccgattcaagaatcgactaattcgag-ggaccaat 25969548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 268
Target Start/End: Original strand, 21387487 - 21387531
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggacca 268  Q
    |||||| |||||||||| ||| |||||||||||||||| ||||||    
T  21387487 aaaacttggtatccgatccaataatcgactaatccgaggggacca 21387531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 256
Target Start/End: Original strand, 24672305 - 24672337
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaat 256  Q
    ||||||||||||||||| |||||||||||||||    
T  24672305 aaaactcggtatccgatccaagaatcgactaat 24672337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 260
Target Start/End: Complemental strand, 51595219 - 51595183
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccga 260  Q
    ||||||||||||||||| |||||||||| ||||||||    
T  51595219 aaaactcggtatccgatccaagaatcgattaatccga 51595183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 41)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 224 - 270
Target Start/End: Original strand, 8456150 - 8456196
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||    
T  8456150 aaaactcggtatccgattcaagaatcgactaatccgaggggaccaat 8456196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 224 - 270
Target Start/End: Complemental strand, 3747778 - 3747732
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    ||||||||||||||||| |||||||||||||||||||| ||||||||    
T  3747778 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaat 3747732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 224 - 270
Target Start/End: Original strand, 8097279 - 8097325
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    ||||||||||||||||| |||||||||||||||||||| ||||||||    
T  8097279 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaat 8097325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 224 - 270
Target Start/End: Original strand, 10083819 - 10083865
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    ||||||||||||||||| |||||||||||||||||||| ||||||||    
T  10083819 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaat 10083865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 224 - 270
Target Start/End: Original strand, 10190742 - 10190788
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    ||||||||||||||||| |||||||||||||||||||| ||||||||    
T  10190742 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaat 10190788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 224 - 270
Target Start/End: Complemental strand, 24407458 - 24407412
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    ||||||||||||||||| |||||||||||||||||||| ||||||||    
T  24407458 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaat 24407412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 224 - 270
Target Start/End: Complemental strand, 26174310 - 26174264
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    ||||||||||||||||| |||||||||||||||||||| ||||||||    
T  26174310 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaat 26174264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 224 - 270
Target Start/End: Original strand, 39041852 - 39041898
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    ||||||||||||||||| |||||||||||||||||||| ||||||||    
T  39041852 aaaactcggtatccgatccaagaatcgactaatccgagtggaccaat 39041898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 224 - 270
Target Start/End: Original strand, 49258262 - 49258308
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    ||||||||||||||||| |||||||||||||||||||| ||||||||    
T  49258262 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaat 49258308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 224 - 270
Target Start/End: Original strand, 52821636 - 52821682
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    ||||||||||||||||| |||||||||||||||||||| ||||||||    
T  52821636 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaat 52821682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 224 - 270
Target Start/End: Original strand, 53424177 - 53424223
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    ||||||||||||||||| |||||||||||||||||||| ||||||||    
T  53424177 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaat 53424223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 224 - 270
Target Start/End: Original strand, 53848434 - 53848480
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    ||||||||||||||||| |||||||||||||||||||| ||||||||    
T  53848434 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaat 53848480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 224 - 271
Target Start/End: Original strand, 48972714 - 48972761
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaatt 271  Q
    ||||||||||||||||||||||||||||||||| |||  |||||||||    
T  48972714 aaaactcggtatccgattcaagaatcgactaattcgaatggaccaatt 48972761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 224 - 270
Target Start/End: Complemental strand, 4048147 - 4048101
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    ||||||||||||||||| |||||||| ||||||||||| ||||||||    
T  4048147 aaaactcggtatccgatccaagaatcaactaatccgaggggaccaat 4048101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 224 - 270
Target Start/End: Original strand, 7485531 - 7485576
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    ||||||||||||||||| |||||||||||||||||||| ||||||||    
T  7485531 aaaactcggtatccgatccaagaatcgactaatccgag-ggaccaat 7485576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 224 - 270
Target Start/End: Original strand, 15566500 - 15566546
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    ||||||||||||||||| |||||||||||||||| ||| ||||||||    
T  15566500 aaaactcggtatccgatccaagaatcgactaatctgaggggaccaat 15566546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 224 - 270
Target Start/End: Original strand, 24165715 - 24165761
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    ||||||||||||||||| |||||||||||||||||||| ||| ||||    
T  24165715 aaaactcggtatccgatccaagaatcgactaatccgaggggaacaat 24165761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 224 - 258
Target Start/End: Complemental strand, 26108475 - 26108441
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatcc 258  Q
    |||||||||||||||||||||||||||||||||||    
T  26108475 aaaactcggtatccgattcaagaatcgactaatcc 26108441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 224 - 270
Target Start/End: Complemental strand, 30257821 - 30257775
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    |||| |||||||||||| |||||||||||||||||||| ||||||||    
T  30257821 aaaattcggtatccgatccaagaatcgactaatccgaggggaccaat 30257775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 224 - 270
Target Start/End: Original strand, 30807153 - 30807198
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    ||||||||||||||||| |||||||||||||||||||| ||||||||    
T  30807153 aaaactcggtatccgatccaagaatcgactaatccgag-ggaccaat 30807198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 224 - 270
Target Start/End: Complemental strand, 32151621 - 32151575
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    ||||||||||||||||| ||||||||||||||| |||| ||||||||    
T  32151621 aaaactcggtatccgatccaagaatcgactaattcgaggggaccaat 32151575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 224 - 270
Target Start/End: Original strand, 40133449 - 40133495
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    ||||||||||||||||| ||||||||||||||| |||| ||||||||    
T  40133449 aaaactcggtatccgatccaagaatcgactaattcgaggggaccaat 40133495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 224 - 270
Target Start/End: Original strand, 45529755 - 45529800
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    ||||||||||||||||| |||||||||||||||||||| ||||||||    
T  45529755 aaaactcggtatccgat-caagaatcgactaatccgaggggaccaat 45529800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 224 - 270
Target Start/End: Complemental strand, 46576545 - 46576499
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    ||||||||||||||||| ||||||||||||||||| || ||||||||    
T  46576545 aaaactcggtatccgatccaagaatcgactaatccaaggggaccaat 46576499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 224 - 270
Target Start/End: Original strand, 52455649 - 52455695
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    |||||||||||||| || |||||||||||||||||||| ||||||||    
T  52455649 aaaactcggtatccaatccaagaatcgactaatccgaggggaccaat 52455695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 224 - 270
Target Start/End: Original strand, 53233911 - 53233956
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    ||||||||||||||||| |||||||||||||||||||| ||||||||    
T  53233911 aaaactcggtatccgat-caagaatcgactaatccgaggggaccaat 53233956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 224 - 257
Target Start/End: Complemental strand, 1693030 - 1692997
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatc 257  Q
    ||||||||||||||||||||||||||||||||||    
T  1693030 aaaactcggtatccgattcaagaatcgactaatc 1692997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 225 - 270
Target Start/End: Complemental strand, 25379957 - 25379912
Alignment:
Q  225 aaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    |||||| ||||||||| |||||||||||||||||||| ||||||||    
T  25379957 aaactcagtatccgatccaagaatcgactaatccgaggggaccaat 25379912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 225 - 270
Target Start/End: Complemental strand, 48105073 - 48105028
Alignment:
Q  225 aaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    |||||||||||||||| |||||||||||||||||||  ||||||||    
T  48105073 aaactcggtatccgatccaagaatcgactaatccgaagggaccaat 48105028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 270
Target Start/End: Complemental strand, 1178367 - 1178322
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    ||||||||||||||||| ||||| |||||||||||||| ||||||||    
T  1178367 aaaactcggtatccgatccaagattcgactaatccgag-ggaccaat 1178322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 270
Target Start/End: Original strand, 18176887 - 18176933
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    ||||||| ||||||||| |||||||||||||||||||  ||||||||    
T  18176887 aaaactctgtatccgatccaagaatcgactaatccgatgggaccaat 18176933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 270
Target Start/End: Complemental strand, 21363140 - 21363094
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    ||||||||||||||||| |||||||||| ||||||||| | ||||||    
T  21363140 aaaactcggtatccgatccaagaatcgattaatccgagggaaccaat 21363094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 270
Target Start/End: Original strand, 25289715 - 25289760
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    ||||||||||||||||| ||||||||||||||| |||| ||||||||    
T  25289715 aaaactcggtatccgatccaagaatcgactaattcgag-ggaccaat 25289760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 270
Target Start/End: Original strand, 32094757 - 32094803
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    ||||||||||||||||| |||||| ||||||||  ||||||||||||    
T  32094757 aaaactcggtatccgatccaagaaccgactaatatgagaggaccaat 32094803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 270
Target Start/End: Complemental strand, 35493108 - 35493062
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    |||||||||||| | || |||||||||||||||||||| ||||||||    
T  35493108 aaaactcggtattcaatccaagaatcgactaatccgaggggaccaat 35493062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 270
Target Start/End: Original strand, 45272416 - 45272462
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    ||||||||||||||||| ||||| || ||||||||||| ||||||||    
T  45272416 aaaactcggtatccgatccaagagtcaactaatccgaggggaccaat 45272462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 270
Target Start/End: Complemental strand, 48977585 - 48977539
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    ||||||||||||||||| |||| | ||||||||||||| ||||||||    
T  48977585 aaaactcggtatccgatccaaggaccgactaatccgaggggaccaat 48977539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 270
Target Start/End: Original strand, 50731237 - 50731283
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    ||||||||||||||||| |||| ||||||||||| ||| ||||||||    
T  50731237 aaaactcggtatccgatccaaggatcgactaatctgaggggaccaat 50731283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 270
Target Start/End: Complemental strand, 50781617 - 50781571
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    ||||||||||||||||| |||| ||||||||||| ||| ||||||||    
T  50781617 aaaactcggtatccgatccaaggatcgactaatctgaggggaccaat 50781571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 270
Target Start/End: Complemental strand, 54475878 - 54475832
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    ||||||||||||| ||| ||||||||||||||||| || ||||||||    
T  54475878 aaaactcggtatctgatccaagaatcgactaatccaaggggaccaat 54475832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 261
Target Start/End: Complemental strand, 11390799 - 11390762
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgag 261  Q
    ||||||| ||||||||| ||||||||||||||||||||    
T  11390799 aaaactcagtatccgatccaagaatcgactaatccgag 11390762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 26)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 224 - 270
Target Start/End: Complemental strand, 35171997 - 35171951
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||    
T  35171997 aaaactcggtatccgattcaagaatcgactaatccgaggggaccaat 35171951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 224 - 270
Target Start/End: Original strand, 11941210 - 11941256
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    ||||||||||||||||| |||||||||||||||||||| ||||||||    
T  11941210 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaat 11941256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 224 - 270
Target Start/End: Complemental strand, 25293356 - 25293310
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    ||||||||||||||||| |||||||||||||||||||| ||||||||    
T  25293356 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaat 25293310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 224 - 270
Target Start/End: Original strand, 44946053 - 44946099
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    ||||||||||||||||| |||||||||||||||||||| ||||||||    
T  44946053 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaat 44946099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 224 - 270
Target Start/End: Original strand, 1501464 - 1501509
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    ||||||||||||||||| |||||||||||||||||||| ||||||||    
T  1501464 aaaactcggtatccgat-caagaatcgactaatccgaggggaccaat 1501509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 224 - 270
Target Start/End: Original strand, 2140486 - 2140532
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    ||||||||||||||||| ||| |||||||||||||||| ||||||||    
T  2140486 aaaactcggtatccgatccaataatcgactaatccgaggggaccaat 2140532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 224 - 270
Target Start/End: Original strand, 4567429 - 4567475
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    |||||| |||||||||| ||||||| |||||||||||||||||||||    
T  4567429 aaaactgggtatccgatccaagaattgactaatccgagaggaccaat 4567475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 224 - 270
Target Start/End: Complemental strand, 15038156 - 15038110
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    ||||||||||||||||| |||||||||||||||| ||| ||||||||    
T  15038156 aaaactcggtatccgatccaagaatcgactaatctgaggggaccaat 15038110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 224 - 270
Target Start/End: Complemental strand, 18692157 - 18692111
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    ||||||||||||||||| ||||||||||||||| |||| ||||||||    
T  18692157 aaaactcggtatccgatccaagaatcgactaatacgaggggaccaat 18692111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 224 - 270
Target Start/End: Complemental strand, 19054223 - 19054177
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    ||||||||||||| ||| |||||||||||||||||||| ||||||||    
T  19054223 aaaactcggtatctgatccaagaatcgactaatccgagcggaccaat 19054177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 224 - 266
Target Start/End: Complemental strand, 27290771 - 27290729
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggac 266  Q
    ||||||||||||||||| |||||||||||||||||||| ||||    
T  27290771 aaaactcggtatccgatccaagaatcgactaatccgaggggac 27290729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 224 - 270
Target Start/End: Complemental strand, 28669070 - 28669024
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    ||||||||||||||||| ||| |||||||||||||||| ||||||||    
T  28669070 aaaactcggtatccgatccaaaaatcgactaatccgaggggaccaat 28669024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 224 - 270
Target Start/End: Original strand, 30466830 - 30466876
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    ||||||||||||||||| |||||||||||||||||||  ||||||||    
T  30466830 aaaactcggtatccgatccaagaatcgactaatccgaagggaccaat 30466876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 224 - 270
Target Start/End: Original strand, 33827573 - 33827619
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    ||||||||||||||||| ||||||||||||||||| || ||||||||    
T  33827573 aaaactcggtatccgatccaagaatcgactaatccaaggggaccaat 33827619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 224 - 270
Target Start/End: Original strand, 34516414 - 34516460
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    |||||| |||||||||| |||||||||||||||||||| ||||||||    
T  34516414 aaaacttggtatccgatccaagaatcgactaatccgaggggaccaat 34516460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 224 - 270
Target Start/End: Original strand, 43374330 - 43374376
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    ||||||||||||||||| |||||||||||||||||||  ||||||||    
T  43374330 aaaactcggtatccgatccaagaatcgactaatccgaagggaccaat 43374376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 224 - 269
Target Start/End: Original strand, 8299859 - 8299904
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaa 269  Q
    |||||||||||||||||||||||||| ||||||||||  |||||||    
T  8299859 aaaactcggtatccgattcaagaatcaactaatccgaagggaccaa 8299904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 231 - 270
Target Start/End: Complemental strand, 45132477 - 45132438
Alignment:
Q  231 ggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    |||||||||| |||||||||| ||||||||||||||||||    
T  45132477 ggtatccgatccaagaatcgattaatccgagaggaccaat 45132438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 270
Target Start/End: Complemental strand, 14487022 - 14486976
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    ||||||||||||||||| |||| | ||||||||||||| ||||||||    
T  14487022 aaaactcggtatccgatccaaggaccgactaatccgaggggaccaat 14486976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 270
Target Start/End: Original strand, 18976455 - 18976501
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    |||| |||||||||||| ||||||||||||||| |||| ||||||||    
T  18976455 aaaattcggtatccgatccaagaatcgactaattcgaggggaccaat 18976501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 270
Target Start/End: Original strand, 27269344 - 27269390
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    |||||||||||||| || |||||||||||||||||||| ||| ||||    
T  27269344 aaaactcggtatcctatccaagaatcgactaatccgaggggatcaat 27269390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 270
Target Start/End: Complemental strand, 31778228 - 31778182
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    ||||||||||||||||| ||||||  |||||||| ||||||||||||    
T  31778228 aaaactcggtatccgatccaagaactgactaatctgagaggaccaat 31778182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 270
Target Start/End: Original strand, 36390569 - 36390614
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    |||||||||||||||||||||| ||||||| ||||||| ||||||||    
T  36390569 aaaactcggtatccgattcaagtatcgactgatccgag-ggaccaat 36390614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 270
Target Start/End: Complemental strand, 39957955 - 39957909
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    |||||||||||||| || |||||||||||||||||||| | ||||||    
T  39957955 aaaactcggtatccaatccaagaatcgactaatccgagggaaccaat 39957909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 270
Target Start/End: Original strand, 44929846 - 44929892
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    ||||||||||||||||| ||||||||||||||| | || ||||||||    
T  44929846 aaaactcggtatccgatccaagaatcgactaattcaaggggaccaat 44929892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 260
Target Start/End: Complemental strand, 8259094 - 8259058
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccga 260  Q
    ||||||| ||||||||| |||||||||||||||||||    
T  8259094 aaaactcagtatccgatccaagaatcgactaatccga 8259058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0576 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 224 - 270
Target Start/End: Original strand, 5082 - 5128
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    ||||||||||||||||| |||||||||||||||||||| ||||||||    
T  5082 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaat 5128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 224 - 270
Target Start/End: Original strand, 2639411 - 2639457
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    ||||||||||||||||| |||||||||||||||||||| ||||||||    
T  2639411 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaat 2639457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 224 - 270
Target Start/End: Original strand, 3734623 - 3734669
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    ||||||||||||||||| |||||||||||||||||||| ||||||||    
T  3734623 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaat 3734669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 224 - 270
Target Start/End: Complemental strand, 4718846 - 4718800
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    ||||||||||||||||| |||||||||||||||||||| ||||||||    
T  4718846 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaat 4718800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 224 - 270
Target Start/End: Original strand, 8765526 - 8765572
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    ||||||||||||||||| |||||||||||||||||||| ||||||||    
T  8765526 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaat 8765572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 224 - 270
Target Start/End: Complemental strand, 9713655 - 9713609
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    ||||||||||||||||| |||||||||||||||||||| ||||||||    
T  9713655 aaaactcggtatccgatccaagaatcgactaatccgagtggaccaat 9713609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 224 - 270
Target Start/End: Complemental strand, 21603431 - 21603385
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    ||||||||||||||||| |||||||||||||||||||| ||||||||    
T  21603431 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaat 21603385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 224 - 270
Target Start/End: Original strand, 34237655 - 34237701
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    ||||||||||||||||| |||||||||||||||||||| ||||||||    
T  34237655 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaat 34237701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 225 - 270
Target Start/End: Complemental strand, 28193674 - 28193629
Alignment:
Q  225 aaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    |||||||||||||||| |||||||||||||||||||| ||||||||    
T  28193674 aaactcggtatccgatccaagaatcgactaatccgaggggaccaat 28193629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 224 - 271
Target Start/End: Complemental strand, 33747083 - 33747036
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaatt 271  Q
    ||||||||||||||||| |||| ||||||||||||||||| |||||||    
T  33747083 aaaactcggtatccgatccaaggatcgactaatccgagagaaccaatt 33747036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 224 - 271
Target Start/End: Original strand, 34610687 - 34610734
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaatt 271  Q
    ||||||||||||||||| ||||||||||||||| |||| |||||||||    
T  34610687 aaaactcggtatccgatccaagaatcgactaattcgaggggaccaatt 34610734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 224 - 270
Target Start/End: Complemental strand, 2618387 - 2618341
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    ||||||||| ||||||| |||||||||||||||||||| ||||||||    
T  2618387 aaaactcggaatccgatccaagaatcgactaatccgaggggaccaat 2618341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 224 - 270
Target Start/End: Complemental strand, 32879480 - 32879434
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    |||||||||||||| || |||||||||||||||||||| ||||||||    
T  32879480 aaaactcggtatccaatccaagaatcgactaatccgaggggaccaat 32879434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 224 - 270
Target Start/End: Complemental strand, 42328205 - 42328159
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    ||||||||||||||||| ||||||||||||||| |||| ||||||||    
T  42328205 aaaactcggtatccgatccaagaatcgactaattcgaggggaccaat 42328159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 270
Target Start/End: Original strand, 4698723 - 4698769
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    |||||||||||||| || || ||||||||||||||||| ||||||||    
T  4698723 aaaactcggtatccaatccatgaatcgactaatccgaggggaccaat 4698769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 270
Target Start/End: Original strand, 6953008 - 6953053
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    |||||||||||| |||| |||||||||||||||||||| ||||||||    
T  6953008 aaaactcggtattcgatccaagaatcgactaatccgag-ggaccaat 6953053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 270
Target Start/End: Complemental strand, 14633155 - 14633109
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    |||||| |||||||||| ||||||||||||||||| || ||||||||    
T  14633155 aaaacttggtatccgatccaagaatcgactaatccaaggggaccaat 14633109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 225 - 271
Target Start/End: Original strand, 15259407 - 15259453
Alignment:
Q  225 aaactcggtatccgattcaagaatcgactaatccgagaggaccaatt 271  Q
    |||||||| ||||||| ||||||||||||||| |||| |||||||||    
T  15259407 aaactcggcatccgatccaagaatcgactaattcgaggggaccaatt 15259453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 270
Target Start/End: Complemental strand, 18128714 - 18128668
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    |||||||||||| |||| |||||| ||||||||| ||||||||||||    
T  18128714 aaaactcggtattcgatccaagaaccgactaatctgagaggaccaat 18128668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 258
Target Start/End: Complemental strand, 18532299 - 18532265
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatcc 258  Q
    ||||||||||||||||| |||||||||||||||||    
T  18532299 aaaactcggtatccgatccaagaatcgactaatcc 18532265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 270
Target Start/End: Complemental strand, 19471811 - 19471765
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    ||||||||||||||||| |||| |||||||||| |||| ||||||||    
T  19471811 aaaactcggtatccgatccaagtatcgactaattcgaggggaccaat 19471765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 270
Target Start/End: Complemental strand, 19542735 - 19542689
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    ||||||||||||||||| |||| |||||||||| |||| ||||||||    
T  19542735 aaaactcggtatccgatccaagtatcgactaattcgaggggaccaat 19542689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 270
Target Start/End: Original strand, 19589961 - 19590007
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    ||||||||||||||||| |||| |||||||||| |||| ||||||||    
T  19589961 aaaactcggtatccgatccaagtatcgactaattcgaggggaccaat 19590007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 270
Target Start/End: Complemental strand, 20306109 - 20306063
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    ||||||||||||||||| |||| |||||||||| |||| ||||||||    
T  20306109 aaaactcggtatccgatccaaggatcgactaattcgaggggaccaat 20306063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 270
Target Start/End: Complemental strand, 21092742 - 21092696
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    ||||||||||||||||| |||| |||||||||| |||| ||||||||    
T  21092742 aaaactcggtatccgatccaaggatcgactaattcgaggggaccaat 21092696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 270
Target Start/End: Complemental strand, 25248547 - 25248502
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    ||||||||||||||||| ||| |||||||||||||||| ||||||||    
T  25248547 aaaactcggtatccgat-caaaaatcgactaatccgaggggaccaat 25248502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 270
Target Start/End: Complemental strand, 39349457 - 39349411
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    |||||| |||||||||| |||||||||||||||||||| ||| ||||    
T  39349457 aaaacttggtatccgatccaagaatcgactaatccgaggggatcaat 39349411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 270
Target Start/End: Original strand, 42643118 - 42643164
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    ||||||||||||||||| |||||||| |||||| |||| ||||||||    
T  42643118 aaaactcggtatccgatccaagaatcaactaatgcgaggggaccaat 42643164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 270
Target Start/End: Original strand, 7557952 - 7557997
Alignment:
Q  225 aaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    |||||||||||||||| ||| ||||||||||| |||| ||||||||    
T  7557952 aaactcggtatccgatgcaaaaatcgactaattcgaggggaccaat 7557997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 261
Target Start/End: Complemental strand, 20470117 - 20470080
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgag 261  Q
    ||||||||||||||||| ||| ||||||||||||||||    
T  20470117 aaaactcggtatccgatccaaaaatcgactaatccgag 20470080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 25)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 224 - 270
Target Start/End: Original strand, 4621237 - 4621283
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    ||||||||||||||||| |||||||||||||||||||| ||||||||    
T  4621237 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaat 4621283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 224 - 270
Target Start/End: Original strand, 7766727 - 7766773
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    |||||||| ||||||||||||||||||||||||||||| ||||||||    
T  7766727 aaaactcgatatccgattcaagaatcgactaatccgaggggaccaat 7766773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 224 - 270
Target Start/End: Complemental strand, 14603993 - 14603947
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    ||||||||||||||||| |||||||||||||||||||| ||||||||    
T  14603993 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaat 14603947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 224 - 270
Target Start/End: Complemental strand, 24122220 - 24122174
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    ||||||||||||||||| |||||||||||||||||||| ||||||||    
T  24122220 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaat 24122174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 225 - 270
Target Start/End: Complemental strand, 17935965 - 17935920
Alignment:
Q  225 aaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    |||||||||||||||| |||||||||||||||||||| ||||||||    
T  17935965 aaactcggtatccgatccaagaatcgactaatccgagtggaccaat 17935920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 224 - 271
Target Start/End: Complemental strand, 23734314 - 23734267
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaatt 271  Q
    |||||| ||||||||||||||||||||||||||| ||| |||||||||    
T  23734314 aaaacttggtatccgattcaagaatcgactaatctgaggggaccaatt 23734267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 224 - 271
Target Start/End: Complemental strand, 23741506 - 23741459
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaatt 271  Q
    |||||| ||||||||||||||||||||||||||| ||| |||||||||    
T  23741506 aaaacttggtatccgattcaagaatcgactaatctgaggggaccaatt 23741459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 224 - 270
Target Start/End: Complemental strand, 5315528 - 5315482
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    ||||||||||||||||| |||||||||||| ||||||| ||||||||    
T  5315528 aaaactcggtatccgatccaagaatcgacttatccgaggggaccaat 5315482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 224 - 270
Target Start/End: Original strand, 7197247 - 7197293
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    ||||||||||||||||| || ||||||||||||||||| ||||||||    
T  7197247 aaaactcggtatccgatccatgaatcgactaatccgaggggaccaat 7197293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 224 - 270
Target Start/End: Original strand, 15059402 - 15059448
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    ||||||||||||||||| ||||||||||||||| |||| ||||||||    
T  15059402 aaaactcggtatccgatccaagaatcgactaattcgaggggaccaat 15059448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 224 - 270
Target Start/End: Complemental strand, 23041719 - 23041673
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    ||||||||||||||||| ||||||||||||||| |||| ||||||||    
T  23041719 aaaactcggtatccgatccaagaatcgactaattcgaggggaccaat 23041673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 224 - 270
Target Start/End: Original strand, 27454864 - 27454910
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    |||||| |||||||||| |||||||||||||||||||| ||||||||    
T  27454864 aaaactaggtatccgatccaagaatcgactaatccgaggggaccaat 27454910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 224 - 270
Target Start/End: Original strand, 40802069 - 40802115
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    |||||||||||| |||||||||||||||||||| | |||||||||||    
T  40802069 aaaactcggtattcgattcaagaatcgactaattctagaggaccaat 40802115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 225 - 270
Target Start/End: Complemental strand, 34778535 - 34778490
Alignment:
Q  225 aaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    |||||||||||||||| ||||||||||||||||| || ||||||||    
T  34778535 aaactcggtatccgatccaagaatcgactaatccaaggggaccaat 34778490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 224 - 256
Target Start/End: Original strand, 8254752 - 8254784
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaat 256  Q
    |||||||||||||||||||||||||||||||||    
T  8254752 aaaactcggtatccgattcaagaatcgactaat 8254784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 224 - 268
Target Start/End: Original strand, 26513148 - 26513192
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggacca 268  Q
    |||||||||||| |||| |||||||||||||||||||| ||||||    
T  26513148 aaaactcggtattcgatccaagaatcgactaatccgaggggacca 26513192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 270
Target Start/End: Complemental strand, 24674590 - 24674544
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    |||| |||||||||||| ||||||||||||||| |||| ||||||||    
T  24674590 aaaattcggtatccgatccaagaatcgactaatacgaggggaccaat 24674544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 270
Target Start/End: Complemental strand, 31162947 - 31162901
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    |||||||||||||||||||||| ||||||||||  |||| |||||||    
T  31162947 aaaactcggtatccgattcaaggatcgactaattagagatgaccaat 31162901  T

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Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 270
Target Start/End: Complemental strand, 18647045 - 18647004
Alignment:
Q  229 tcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    |||||||||||||||||||||||||||| |||| ||| ||||    
T  18647045 tcggtatccgattcaagaatcgactaattcgaggggatcaat 18647004  T

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Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 270
Target Start/End: Original strand, 37351454 - 37351499
Alignment:
Q  225 aaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    |||||||||||||||| |||| | ||||||||||||| ||||||||    
T  37351454 aaactcggtatccgatccaaggaccgactaatccgaggggaccaat 37351499  T

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Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 269
Target Start/End: Original strand, 40145889 - 40145926
Alignment:
Q  232 gtatccgattcaagaatcgactaatccgagaggaccaa 269  Q
    ||||||||| |||||||||||||||||||| |||||||    
T  40145889 gtatccgatccaagaatcgactaatccgaggggaccaa 40145926  T

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Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 257
Target Start/End: Original strand, 45331621 - 45331654
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatc 257  Q
    |||||||||||||||||||||||||||| |||||    
T  45331621 aaaactcggtatccgattcaagaatcgattaatc 45331654  T

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Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 260
Target Start/End: Original strand, 9500355 - 9500391
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccga 260  Q
    |||||||| |||||||| |||||||||||||||||||    
T  9500355 aaaactcgatatccgatccaagaatcgactaatccga 9500391  T

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Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 256
Target Start/End: Original strand, 36155888 - 36155920
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaat 256  Q
    ||||||||||||||||| |||||||||||||||    
T  36155888 aaaactcggtatccgatccaagaatcgactaat 36155920  T

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Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 260
Target Start/End: Complemental strand, 48699956 - 48699920
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccga 260  Q
    |||||||| |||||||| |||||||||||||||||||    
T  48699956 aaaactcgatatccgatccaagaatcgactaatccga 48699920  T

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Target: scaffold0026 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 225 - 269
Target Start/End: Original strand, 2478 - 2522
Alignment:
Q  225 aaactcggtatccgattcaagaatcgactaatccgagaggaccaa 269  Q
    ||||||| |||||||||||||||||||||||||||||| ||||||    
T  2478 aaactcgatatccgattcaagaatcgactaatccgagaagaccaa 2522  T

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Target: scaffold0217 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 224 - 270
Target Start/End: Original strand, 7309 - 7355
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    |||||| |||||||||| |||||||||||||||||||| ||||||||    
T  7309 aaaacttggtatccgatccaagaatcgactaatccgaggggaccaat 7355  T

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Target: scaffold0199 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 224 - 270
Target Start/End: Original strand, 8451 - 8497
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    |||||||||||||||||  ||||||||||||||||||| ||||||||    
T  8451 aaaactcggtatccgatctaagaatcgactaatccgagcggaccaat 8497  T

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Target: scaffold0102 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 224 - 270
Target Start/End: Complemental strand, 39289 - 39243
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    ||||||||||||| ||| |||||||||||||||||||| ||||||||    
T  39289 aaaactcggtatctgatccaagaatcgactaatccgaggggaccaat 39243  T

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Target: scaffold0070 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 224 - 270
Target Start/End: Complemental strand, 40521 - 40476
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    ||||||||||||||||| |||||||||||||||||||| ||||||||    
T  40521 aaaactcggtatccgatccaagaatcgactaatccgag-ggaccaat 40476  T

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Target: scaffold0019 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 224 - 270
Target Start/End: Complemental strand, 162006 - 161960
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    ||||||||||||| ||| |||||||||||||||||||| ||||||||    
T  162006 aaaactcggtatctgatccaagaatcgactaatccgaggggaccaat 161960  T

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Target: scaffold0016 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 224 - 270
Target Start/End: Complemental strand, 32484 - 32439
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    ||||||||||||||||| |||||||||||||||||||| ||||||||    
T  32484 aaaactcggtatccgat-caagaatcgactaatccgaggggaccaat 32439  T

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Target: scaffold1175 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold1175
Description:

Target: scaffold1175; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 270
Target Start/End: Original strand, 2426 - 2472
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    |||||||||||||||||||||| |  |||||||||||| ||||||||    
T  2426 aaaactcggtatccgattcaaggacggactaatccgaggggaccaat 2472  T

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Target: scaffold0623 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0623
Description:

Target: scaffold0623; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 270
Target Start/End: Original strand, 1057 - 1102
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    ||||||||||||||||| ||||||||||||||| |||| ||||||||    
T  1057 aaaactcggtatccgat-caagaatcgactaattcgaggggaccaat 1102  T

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Target: scaffold0366 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0366
Description:

Target: scaffold0366; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 270
Target Start/End: Original strand, 9300 - 9345
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    ||||||||||||||||| ||||||||||||||| |||| ||||||||    
T  9300 aaaactcggtatccgat-caagaatcgactaattcgaggggaccaat 9345  T

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Target: scaffold0068 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 270
Target Start/End: Original strand, 41645 - 41690
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    ||||||| ||||||||| |||||||||||||||||||| ||||||||    
T  41645 aaaactctgtatccgat-caagaatcgactaatccgaggggaccaat 41690  T

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Target: scaffold0049 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 270
Target Start/End: Complemental strand, 66951 - 66905
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccgagaggaccaat 270  Q
    ||||||||||||||||| |||| | ||||||||||||| ||||||||    
T  66951 aaaactcggtatccgatccaaggaccgactaatccgaggggaccaat 66905  T

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Target: scaffold0008 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 260
Target Start/End: Complemental strand, 265915 - 265880
Alignment:
Q  224 aaaactcggtatccgattcaagaatcgactaatccga 260  Q
    ||||||||||||||||| |||||||||||||||||||    
T  265915 aaaactcggtatccgat-caagaatcgactaatccga 265880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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