View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1262_low_67 (Length: 273)
Name: NF1262_low_67
Description: NF1262
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1262_low_67 |
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Alignment Details
Target: chr3 (Bit Score: 165; Significance: 3e-88; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 38 - 222
Target Start/End: Original strand, 5123447 - 5123631
Alignment:
| Q |
38 |
atctagaagggatgcatgaaagcatagtggagagagatgacaaatccaccacacaatgcagtttagcgccaatccacagccataacgccacgacaaacgg |
137 |
Q |
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| T |
5123447 |
atctagaagggatgcatgaaagcatagtggagagagatgacaagtctaccacacaatgcagtttagcgccaatccacagccataacgccacgacaaacgg |
5123546 |
T |
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| Q |
138 |
gcacataggaaaatgttgcgaagtcctcatacaaagaatacaaacaaaaacaacatcacaaccacgatttatgagattctcatcc |
222 |
Q |
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| T |
5123547 |
gcacataagaaaatgttgcgaagtcttcatacaaataatacaaacaaaaacaacatcacaaccacgatttatgagattctcatcc |
5123631 |
T |
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