View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12631_high_2 (Length: 540)

Name: NF12631_high_2
Description: NF12631
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12631_high_2
NF12631_high_2
[»] chr5 (46 HSPs)
chr5 (279-524)||(5975478-5975724)
chr5 (10-193)||(5975810-5975993)
chr5 (64-198)||(8188133-8188267)
chr5 (62-197)||(224521-224656)
chr5 (81-199)||(18695597-18695715)
chr5 (83-197)||(5384298-5384412)
chr5 (83-188)||(21389095-21389200)
chr5 (66-198)||(1273138-1273270)
chr5 (124-204)||(42510157-42510237)
chr5 (74-193)||(19827083-19827202)
chr5 (78-132)||(13519595-13519649)
chr5 (66-199)||(22812321-22812455)
chr5 (62-133)||(9219293-9219364)
chr5 (73-127)||(10736877-10736931)
chr5 (123-197)||(15613555-15613629)
chr5 (124-197)||(5977066-5977141)
chr5 (71-131)||(11796687-11796747)
chr5 (124-204)||(38471332-38471412)
chr5 (71-134)||(9170829-9170892)
chr5 (126-197)||(15614955-15615026)
chr5 (89-204)||(15857576-15857691)
chr5 (73-204)||(19524026-19524156)
chr5 (73-132)||(35047536-35047595)
chr5 (67-133)||(10978212-10978278)
chr5 (124-197)||(223276-223349)
chr5 (160-197)||(12933801-12933838)
chr5 (124-197)||(19525281-19525354)
chr5 (161-197)||(12947962-12947998)
chr5 (126-197)||(15510258-15510329)
chr5 (81-180)||(32735429-32735528)
chr5 (73-204)||(42511608-42511739)
chr5 (62-132)||(4124875-4124945)
chr5 (141-199)||(22819559-22819617)
chr5 (166-204)||(26403350-26403388)
chr5 (167-197)||(42980745-42980775)
chr5 (123-204)||(10085837-10085918)
chr5 (160-197)||(18678026-18678063)
chr5 (124-197)||(21387687-21387760)
chr5 (124-204)||(5382985-5383065)
chr5 (81-149)||(12829668-12829736)
chr5 (81-149)||(12861647-12861715)
chr5 (161-197)||(12936132-12936168)
chr5 (161-197)||(12950290-12950326)
chr5 (124-204)||(18693741-18693821)
chr5 (160-196)||(30253637-30253673)
chr5 (81-197)||(38473505-38473621)
[»] chr4 (51 HSPs)
chr4 (10-197)||(46795904-46796092)
chr4 (73-197)||(47667228-47667352)
chr4 (62-197)||(38553979-38554114)
chr4 (73-197)||(307747-307871)
chr4 (73-199)||(3528238-3528364)
chr4 (73-199)||(41348287-41348413)
chr4 (73-197)||(29665516-29665639)
chr4 (73-197)||(56001211-56001334)
chr4 (124-199)||(34438454-34438529)
chr4 (71-138)||(52137538-52137605)
chr4 (65-127)||(36846491-36846553)
chr4 (73-204)||(28103428-28103559)
chr4 (74-199)||(11113790-11113915)
chr4 (62-133)||(35348914-35348985)
chr4 (73-204)||(38417596-38417727)
chr4 (62-133)||(39056542-39056613)
chr4 (123-198)||(40146615-40146690)
chr4 (74-204)||(43418076-43418206)
chr4 (73-198)||(31711141-31711266)
chr4 (73-197)||(21104252-21104376)
chr4 (141-197)||(40143704-40143760)
chr4 (73-133)||(44499923-44499983)
chr4 (122-197)||(33377355-33377430)
chr4 (120-191)||(56297668-56297739)
chr4 (123-197)||(1273425-1273499)
chr4 (71-133)||(36244704-36244766)
chr4 (71-133)||(56157052-56157114)
chr4 (72-144)||(2292253-2292325)
chr4 (77-133)||(26495239-26495295)
chr4 (77-125)||(26631162-26631210)
chr4 (69-197)||(27408813-27408941)
chr4 (81-204)||(6139040-6139163)
chr4 (98-197)||(15787469-15787568)
chr4 (73-204)||(34439602-34439733)
chr4 (71-133)||(8363326-8363388)
chr4 (152-197)||(26376379-26376424)
chr4 (160-204)||(30683056-30683100)
chr4 (124-204)||(48207710-48207790)
chr4 (161-204)||(5687218-5687261)
chr4 (74-133)||(39591055-39591114)
chr4 (75-133)||(1521126-1521183)
chr4 (159-197)||(10403445-10403483)
chr4 (73-111)||(26376446-26376484)
chr4 (160-198)||(26393156-26393194)
chr4 (135-197)||(27410687-27410748)
chr4 (71-197)||(44304919-44305045)
chr4 (124-193)||(15446663-15446732)
chr4 (76-133)||(49895158-49895215)
chr4 (160-204)||(30682763-30682807)
chr4 (161-197)||(37560329-37560365)
chr4 (161-197)||(55952875-55952911)
[»] chr7 (46 HSPs)
chr7 (46-197)||(41515046-41515199)
chr7 (46-204)||(28326303-28326463)
chr7 (73-197)||(45721708-45721832)
chr7 (62-133)||(17288173-17288244)
chr7 (71-138)||(35296755-35296822)
chr7 (75-196)||(13446602-13446723)
chr7 (71-133)||(32653580-32653642)
chr7 (124-197)||(33459536-33459609)
chr7 (62-133)||(10955962-10956033)
chr7 (82-197)||(24873548-24873663)
chr7 (66-133)||(29589202-29589269)
chr7 (76-133)||(43442705-43442762)
chr7 (65-133)||(25532258-25532326)
chr7 (73-133)||(26146646-26146706)
chr7 (124-204)||(46458706-46458786)
chr7 (73-132)||(3330810-3330869)
chr7 (71-133)||(666843-666905)
chr7 (71-133)||(41329407-41329469)
chr7 (84-197)||(40926472-40926585)
chr7 (153-197)||(17288242-17288286)
chr7 (69-197)||(25153708-25153836)
chr7 (126-198)||(33458359-33458430)
chr7 (146-197)||(43935235-43935286)
chr7 (123-197)||(43007641-43007715)
chr7 (123-197)||(43936132-43936206)
chr7 (77-195)||(45089523-45089641)
chr7 (123-197)||(47163203-47163277)
chr7 (75-144)||(18670448-18670517)
chr7 (124-197)||(41516337-41516410)
chr7 (92-133)||(44376646-44376687)
chr7 (92-133)||(44385513-44385554)
chr7 (124-204)||(131992-132072)
chr7 (136-204)||(19278396-19278464)
chr7 (122-197)||(43006435-43006510)
chr7 (160-199)||(46457118-46457157)
chr7 (161-199)||(4168879-4168917)
chr7 (74-144)||(14107935-14108005)
chr7 (71-197)||(14206723-14206848)
chr7 (71-197)||(14215413-14215538)
chr7 (74-144)||(14417892-14417962)
chr7 (166-204)||(19848869-19848907)
chr7 (123-197)||(22746312-22746386)
chr7 (81-150)||(43931816-43931885)
chr7 (160-197)||(45719665-45719702)
chr7 (130-199)||(46674933-46675002)
chr7 (172-204)||(38002555-38002587)
[»] chr8 (51 HSPs)
chr8 (10-197)||(38035-38223)
chr8 (73-199)||(22621076-22621202)
chr8 (75-197)||(37274937-37275059)
chr8 (73-197)||(39516439-39516563)
chr8 (113-197)||(24068380-24068464)
chr8 (73-182)||(7770062-7770171)
chr8 (73-182)||(7777739-7777848)
chr8 (73-185)||(7795828-7795941)
chr8 (73-193)||(7815097-7815218)
chr8 (73-197)||(36939975-36940099)
chr8 (73-137)||(42793812-42793876)
chr8 (77-132)||(36757166-36757221)
chr8 (71-204)||(19914846-19914979)
chr8 (73-133)||(24191494-24191554)
chr8 (73-133)||(43203219-43203279)
chr8 (71-133)||(9853684-9853746)
chr8 (66-199)||(35945372-35945505)
chr8 (77-185)||(44102011-44102119)
chr8 (81-199)||(16362467-16362585)
chr8 (71-197)||(29739583-29739709)
chr8 (77-203)||(39323831-39323957)
chr8 (77-138)||(13514811-13514872)
chr8 (77-138)||(13604344-13604405)
chr8 (65-202)||(34616174-34616316)
chr8 (124-204)||(13367043-13367123)
chr8 (160-204)||(29738334-29738378)
chr8 (124-199)||(37276236-37276311)
chr8 (160-197)||(7816117-7816154)
chr8 (160-200)||(20308652-20308692)
chr8 (160-200)||(21095285-21095325)
chr8 (77-125)||(31844493-31844541)
chr8 (161-197)||(37472453-37472489)
chr8 (73-133)||(45395957-45396017)
chr8 (74-133)||(118967-119026)
chr8 (160-199)||(24069475-24069514)
chr8 (62-133)||(24306053-24306124)
chr8 (81-204)||(37473986-37474109)
chr8 (135-197)||(38591011-38591073)
chr8 (161-195)||(39515251-39515285)
chr8 (171-204)||(1570246-1570279)
chr8 (160-193)||(7796836-7796869)
chr8 (73-138)||(8397200-8397265)
chr8 (160-197)||(19913542-19913579)
chr8 (128-197)||(36070228-36070297)
chr8 (124-197)||(37324681-37324754)
chr8 (73-126)||(38697280-38697333)
chr8 (73-150)||(44607258-44607335)
chr8 (161-197)||(7770927-7770963)
chr8 (135-203)||(8096549-8096617)
chr8 (124-204)||(39220722-39220802)
chr8 (89-149)||(40251314-40251374)
[»] chr3 (43 HSPs)
chr3 (73-197)||(48252983-48253107)
chr3 (73-197)||(47766893-47767017)
chr3 (77-185)||(53809439-53809547)
chr3 (71-197)||(32980392-32980518)
chr3 (66-197)||(8372551-8372682)
chr3 (73-137)||(10301757-10301821)
chr3 (65-204)||(43345362-43345501)
chr3 (73-133)||(7271533-7271593)
chr3 (71-138)||(14744175-14744242)
chr3 (71-185)||(25585773-25585887)
chr3 (73-133)||(10339931-10339991)
chr3 (71-197)||(11220598-11220724)
chr3 (71-133)||(49380891-49380953)
chr3 (130-199)||(47808105-47808174)
chr3 (77-197)||(17345361-17345480)
chr3 (164-204)||(49122035-49122075)
chr3 (71-133)||(13621895-13621957)
chr3 (123-197)||(29536764-29536838)
chr3 (75-133)||(54750387-54750444)
chr3 (124-197)||(11219480-11219553)
chr3 (81-134)||(20486121-20486174)
chr3 (124-197)||(26798899-26798972)
chr3 (83-139)||(7921595-7921651)
chr3 (81-132)||(45422115-45422166)
chr3 (123-198)||(47855330-47855405)
chr3 (129-204)||(54653964-54654039)
chr3 (71-193)||(19252942-19253064)
chr3 (124-185)||(25583176-25583237)
chr3 (123-196)||(48866192-48866265)
chr3 (124-204)||(48867423-48867503)
chr3 (73-131)||(5122429-5122487)
chr3 (73-139)||(26797427-26797493)
chr3 (74-204)||(38639061-38639191)
chr3 (124-197)||(8371270-8371343)
chr3 (166-203)||(12060702-12060739)
chr3 (160-197)||(19622055-19622092)
chr3 (124-197)||(39133067-39133140)
chr3 (160-197)||(51401380-51401417)
chr3 (161-197)||(7583520-7583556)
chr3 (172-204)||(19579335-19579367)
chr3 (124-204)||(23559862-23559942)
chr3 (73-133)||(40896687-40896747)
chr3 (160-204)||(51825650-51825694)
[»] chr1 (46 HSPs)
chr1 (73-199)||(24516382-24516508)
chr1 (73-199)||(40110594-40110720)
chr1 (73-202)||(26803158-26803287)
chr1 (83-204)||(50679773-50679894)
chr1 (62-197)||(49139851-49139986)
chr1 (16-133)||(40533484-40533603)
chr1 (124-198)||(19466198-19466272)
chr1 (71-133)||(51446780-51446842)
chr1 (81-198)||(33941366-33941483)
chr1 (77-133)||(12667218-12667274)
chr1 (124-204)||(36509854-36509934)
chr1 (129-204)||(3979311-3979386)
chr1 (73-204)||(13929338-13929469)
chr1 (73-204)||(36511273-36511404)
chr1 (124-199)||(40109409-40109484)
chr1 (62-133)||(48528824-48528896)
chr1 (124-199)||(2973001-2973076)
chr1 (83-138)||(14429863-14429918)
chr1 (124-199)||(22167827-22167902)
chr1 (77-144)||(51217721-51217788)
chr1 (123-197)||(13641307-13641381)
chr1 (71-133)||(14479452-14479514)
chr1 (123-197)||(25787156-25787230)
chr1 (71-197)||(26054947-26055073)
chr1 (75-133)||(26287717-26287774)
chr1 (71-133)||(28051545-28051607)
chr1 (73-199)||(34654282-34654408)
chr1 (123-197)||(47136679-47136753)
chr1 (123-197)||(47411440-47411514)
chr1 (160-197)||(14071232-14071269)
chr1 (161-197)||(13930705-13930741)
chr1 (88-136)||(32459551-32459599)
chr1 (161-197)||(47411034-47411070)
chr1 (124-199)||(26801991-26802066)
chr1 (123-197)||(2971749-2971823)
chr1 (75-133)||(5611853-5611910)
chr1 (73-127)||(6048040-6048094)
chr1 (123-197)||(25786018-25786092)
chr1 (124-197)||(21277044-21277117)
chr1 (124-189)||(24517607-24517672)
chr1 (124-197)||(26056140-26056213)
chr1 (75-144)||(28999942-29000011)
chr1 (130-198)||(3978093-3978161)
chr1 (152-204)||(9633818-9633870)
chr1 (172-204)||(44979478-44979510)
chr1 (161-197)||(52181335-52181371)
[»] chr2 (35 HSPs)
chr2 (72-197)||(6706976-6707101)
chr2 (74-204)||(15850155-15850285)
chr2 (71-132)||(4919945-4920006)
chr2 (73-133)||(1147866-1147926)
chr2 (77-204)||(25569812-25569939)
chr2 (74-132)||(45699647-45699705)
chr2 (71-204)||(11386667-11386800)
chr2 (73-133)||(19397647-19397707)
chr2 (65-188)||(40174699-40174821)
chr2 (71-133)||(28610139-28610201)
chr2 (124-197)||(23177724-23177797)
chr2 (124-197)||(23588981-23589054)
chr2 (160-200)||(10367286-10367326)
chr2 (160-204)||(37869069-37869113)
chr2 (81-204)||(3533576-3533699)
chr2 (123-197)||(2583538-2583612)
chr2 (73-139)||(4830617-4830683)
chr2 (71-197)||(10368325-10368451)
chr2 (71-128)||(2717718-2717775)
chr2 (66-127)||(9473984-9474045)
chr2 (152-197)||(35799562-35799607)
chr2 (160-204)||(12854133-12854177)
chr2 (76-132)||(16289895-16289951)
chr2 (81-197)||(23178832-23178948)
chr2 (81-197)||(23590089-23590205)
chr2 (128-199)||(4829513-4829584)
chr2 (160-199)||(7037014-7037053)
chr2 (123-197)||(2581853-2581927)
chr2 (166-204)||(7038367-7038405)
chr2 (161-199)||(7982360-7982398)
chr2 (170-204)||(10477385-10477419)
chr2 (160-197)||(12852936-12852973)
chr2 (77-141)||(4513699-4513763)
chr2 (161-197)||(4630114-4630150)
chr2 (93-197)||(21012042-21012146)
[»] scaffold0025 (1 HSPs)
scaffold0025 (81-198)||(54640-54757)
[»] scaffold0084 (1 HSPs)
scaffold0084 (78-193)||(11760-11875)
[»] chr6 (20 HSPs)
chr6 (77-144)||(18773757-18773824)
chr6 (71-204)||(31740212-31740345)
chr6 (123-196)||(16269609-16269682)
chr6 (73-133)||(18242249-18242309)
chr6 (71-120)||(11968404-11968453)
chr6 (73-134)||(30232845-30232906)
chr6 (73-133)||(138145-138205)
chr6 (73-133)||(146166-146226)
chr6 (84-204)||(33807732-33807852)
chr6 (124-199)||(27440168-27440243)
chr6 (123-197)||(8412308-8412382)
chr6 (123-197)||(22299895-22299969)
chr6 (73-138)||(13279466-13279530)
chr6 (124-197)||(31738413-31738486)
chr6 (166-203)||(33129325-33129362)
chr6 (130-197)||(8411136-8411203)
chr6 (81-204)||(13800074-13800196)
chr6 (160-202)||(293669-293711)
chr6 (160-197)||(19368547-19368584)
chr6 (160-193)||(34084163-34084196)
[»] scaffold0098 (1 HSPs)
scaffold0098 (73-199)||(42288-42414)
[»] scaffold0687 (1 HSPs)
scaffold0687 (73-193)||(6505-6626)
[»] scaffold0046 (1 HSPs)
scaffold0046 (77-193)||(24761-24877)
[»] scaffold0219 (1 HSPs)
scaffold0219 (62-133)||(7011-7082)
[»] scaffold0290 (2 HSPs)
scaffold0290 (71-197)||(8429-8555)
scaffold0290 (124-197)||(9471-9544)
[»] scaffold0051 (1 HSPs)
scaffold0051 (97-197)||(22177-22277)
[»] scaffold0013 (1 HSPs)
scaffold0013 (69-197)||(96210-96338)
[»] scaffold0003 (1 HSPs)
scaffold0003 (124-199)||(47118-47193)
[»] scaffold2127 (1 HSPs)
scaffold2127 (123-197)||(507-581)
[»] scaffold0114 (1 HSPs)
scaffold0114 (71-133)||(38657-38719)
[»] scaffold1974 (1 HSPs)
scaffold1974 (124-197)||(621-694)
[»] scaffold1878 (1 HSPs)
scaffold1878 (124-197)||(580-653)
[»] scaffold0045 (1 HSPs)
scaffold0045 (74-150)||(75842-75918)


Alignment Details
Target: chr5 (Bit Score: 191; Significance: 1e-103; HSPs: 46)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 279 - 524
Target Start/End: Complemental strand, 5975724 - 5975478
Alignment:
Q  279 tgtgtattctttagaccatttaagattgatcaacgactacaaaggtcctgacaacgtgagttcaagattccttgaatgcatgaaatccaaatttgtttag 378  Q
    ||||||||||||||||||| ||| |||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5975724 tgtgtattctttagaccatctaatattgatcaacgactgcaaatgtcctgacaacgtgagttcaagattccttgaatgcatgaaatccaaatttgtttag 5975625  T
Q  379 taccatatgcattaacggtggaatgtattaatcaagttttgagacctccct-nnnnnnnngtgatgagaccactcatgaacatgtcgtgttttatactta 477  Q
    ||| ||||||||||||||||||||||| |||||||||||||||||||||||         ||||||||||||||||||||||||||||||||||||||||    
T  5975624 tactatatgcattaacggtggaatgtagtaatcaagttttgagacctccctaaaaaaaaagtgatgagaccactcatgaacatgtcgtgttttatactta 5975525  T
Q  478 tactacatcacaagcttttaattaacatgactaatttttctttcttt 524  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  5975524 tactacatcacaagcttttaattaacatgactaatttttctttcttt 5975478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 10 - 193
Target Start/End: Complemental strand, 5975993 - 5975810
Alignment:
Q  10 aggagcagagagaagatgatgaaaagtgnnnnnnntttaggtgccaacggttctattaaacataatggacatgcaatcaaatggttaaaatcatatcaaa 109  Q
    ||||| ||||||||||||||||||||||        ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5975993 aggagaagagagaagatgatgaaaagtgaaaaaaaattaggtgccgacggttctattaaacataatggacatgcaatcaaatggttaaaatcatatcaaa 5975894  T
Q  110 aactttagacattaaaaaactaacagagagaaccacaatagcaaacggatgaagacttatgagaccaaattgagacactttata 193  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| || ||||||||||||||||||||||||||||||||||    
T  5975893 aactttagacattaaaaaactaacagagagaaccacaatagtaaacagaggaagacttatgagaccaaattgagacactttata 5975810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 64 - 198
Target Start/End: Original strand, 8188133 - 8188267
Alignment:
Q  64 attaaacataatggacatgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaacagagagaaccacaatagcaaacggatgaag 163  Q
    |||||| ||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||| ||||| |||||  ||| ||| ||| ||||    
T  8188133 attaaatataatggacatgcaatcaaatggttaaaatcatatcagaaattttagacattaaaaaactaacggagaggaccacgttagtaaatggaggaag 8188232  T
Q  164 acttatgagaccaaattgagacactttatagttaa 198  Q
    ||||||  ||||||||||| |||||| ||||||||    
T  8188233 acttataggaccaaattgacacacttaatagttaa 8188267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 62 - 197
Target Start/End: Original strand, 224521 - 224656
Alignment:
Q  62 ctattaaacataatggacatgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaacagagagaaccacaatagcaaacggatga 161  Q
    |||||||| | |||| || ||| |||||||||||||| |||||||||||| ||||||||||||||||||||| ||||  || ||| ||| || |||| ||    
T  224521 ctattaaatacaatgaacgtgcgatcaaatggttaaagtcatatcaaaaaatttagacattaaaaaactaacggagatgactacattagtaatcggagga 224620  T
Q  162 agacttatgagaccaaattgagacactttatagtta 197  Q
    ||||||||||||||||||||||||||||||||||||    
T  224621 agacttatgagaccaaattgagacactttatagtta 224656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 81 - 199
Target Start/End: Original strand, 18695597 - 18695715
Alignment:
Q  81 tgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaacagagagaaccacaatagcaaacggatgaagacttatgagaccaaatt 180  Q
    |||||||||| |||| ||| ||||||||||| ||||||||||||||||||||| ||||  |||| | ||| ||||||||||||||||||| |||||||||    
T  18695597 tgcaatcaaacggttgaaaacatatcaaaaattttagacattaaaaaactaacggagatgaccatattagtaaacggatgaagacttatgggaccaaatt 18695696  T
Q  181 gagacactttatagttaag 199  Q
    |||||||||||||||||||    
T  18695697 gagacactttatagttaag 18695715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 83 - 197
Target Start/End: Original strand, 5384298 - 5384412
Alignment:
Q  83 caatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaacagagagaaccacaatagcaaacggatgaagacttatgagaccaaattga 182  Q
    ||||| ||||||| |||| ||||||||||  ||| |||||||||||||||| ||||| |||| ||||| ||||||| ||||| ||||| |||||||||||    
T  5384298 caatcgaatggttgaaattatatcaaaaatattaaacattaaaaaactaacggagaggaccaaaatagtaaacggacgaagatttatgggaccaaattga 5384397  T
Q  183 gacactttatagtta 197  Q
    |||||||||||||||    
T  5384398 gacactttatagtta 5384412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 83 - 188
Target Start/End: Original strand, 21389095 - 21389200
Alignment:
Q  83 caatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaacagagagaaccacaatagcaaacggatgaagacttatgagaccaaattga 182  Q
    |||||||| |||| ||| ||||| ||||| ||||||||||||||||||||| ||||| |||| | ||| ||||||| ||||||||||| |||||||||||    
T  21389095 caatcaaacggttgaaaacatataaaaaattttagacattaaaaaactaacggagaggaccatattagtaaacggaggaagacttatgggaccaaattga 21389194  T
Q  183 gacact 188  Q
    ||||||    
T  21389195 gacact 21389200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 66 - 198
Target Start/End: Complemental strand, 1273270 - 1273138
Alignment:
Q  66 taaacataatggacatgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaacagagagaaccacaatagcaaacggatgaagac 165  Q
    |||| ||||||||| ||||||| ||||||| |||||||||||||||  ||| |||||||||||||||| ||| | |||| ||| | |||| |  |||||     
T  1273270 taaatataatggacctgcaatcgaatggttgaaatcatatcaaaaatattaaacattaaaaaactaacggaggggaccaaaattgtaaactgcagaagat 1273171  T
Q  166 ttatgagaccaaattgagacactttatagttaa 198  Q
    ||||| ||||||||||||||| |||||||||||    
T  1273170 ttatgggaccaaattgagacattttatagttaa 1273138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 124 - 204
Target Start/End: Complemental strand, 42510237 - 42510157
Alignment:
Q  124 aaaaactaacagagagaaccacaatagcaaacggatgaagacttatgagaccaaattgagacactttatagttaagagacc 204  Q
    |||||||||| |||||||||| ||||| ||||||  ||||| ||||| |||||||||||||||||||||||||||| ||||    
T  42510237 aaaaactaacggagagaaccaaaatagtaaacggcagaagatttatgggaccaaattgagacactttatagttaagggacc 42510157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 74 - 193
Target Start/End: Original strand, 19827083 - 19827202
Alignment:
Q  74 atggacatgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaacagagagaaccacaatagcaaacggatgaagacttatgaga 173  Q
    |||||| ||||||||||||||  |||  |||||||||| ||||||||||||||||| ||| ||    |||| ||| | ||||||| ||||| ||||| ||    
T  19827083 atggacctgcaatcaaatggtcgaaacaatatcaaaaaatttagacattaaaaaacaaacggatgtgaccaaaatggtaaacggaagaagatttatggga 19827182  T
Q  174 ccaaattgagacactttata 193  Q
    ||||||||||||||||||||    
T  19827183 ccaaattgagacactttata 19827202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 78 - 132
Target Start/End: Complemental strand, 13519649 - 13519595
Alignment:
Q  78 acatgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaa 132  Q
    |||||||||||||||||||||||||||||||||  ||||||||||||||||||||    
T  13519649 acatgcaatcaaatggttaaaatcatatcaaaagttttagacattaaaaaactaa 13519595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 66 - 199
Target Start/End: Original strand, 22812321 - 22812455
Alignment:
Q  66 taaacataatggacatgcaatcaaatggttaaaatcatatcaaaaactttagacatt-aaaaaactaacagagagaaccacaatagcaaacggatgaaga 164  Q
    |||| ||||||||| ||||||| ||||||| |||||||||||||||  ||| ||||| ||||||||||| ||| | |||| ||||| |||| |  |||||    
T  22812321 taaatataatggacctgcaatcgaatggttgaaatcatatcaaaaatattaaacattaaaaaaactaacggaggggaccaaaatagtaaactgcagaaga 22812420  T
Q  165 cttatgagaccaaattgagacactttatagttaag 199  Q
     ||||| || |||| ||||||| ||||||||||||    
T  22812421 tttatgggatcaaagtgagacattttatagttaag 22812455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 62 - 133
Target Start/End: Complemental strand, 9219364 - 9219293
Alignment:
Q  62 ctattaaacataatggacatgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaac 133  Q
    |||||||| | |||| ||||||||||||| ||||||||||| || ||||| |||||||||||||||||||||    
T  9219364 ctattaaatacaatgaacatgcaatcaaacggttaaaatcaaataaaaaattttagacattaaaaaactaac 9219293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 73 - 127
Target Start/End: Original strand, 10736877 - 10736931
Alignment:
Q  73 aatggacatgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaa 127  Q
    ||||||||| |||||||||||||||||||| |||||||| |||||||||||||||    
T  10736877 aatggacattcaatcaaatggttaaaatcaaatcaaaaattttagacattaaaaa 10736931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 123 - 197
Target Start/End: Complemental strand, 15613629 - 15613555
Alignment:
Q  123 aaaaaactaacagagagaaccacaatagcaaacggatgaagacttatgagaccaaattgagacactttatagtta 197  Q
    |||||| |||| ||||| |||| ||||| ||||||| ||||| ||||| ||||||||||||||||||||||||||    
T  15613629 aaaaaattaacggagaggaccaaaatagtaaacggaagaagatttatgggaccaaattgagacactttatagtta 15613555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 124 - 197
Target Start/End: Original strand, 5977066 - 5977141
Alignment:
Q  124 aaaaactaacagagagaaccacaatagcaaacggatgaagacttatgagaccaaattgag--acactttatagtta 197  Q
    ||||||||||||| || |||||| ||| ||||||||||| ||||||| ||||||||||||  ||||||||||||||    
T  5977066 aaaaactaacagaaaggaccacattagtaaacggatgaatacttatgggaccaaattgagacacactttatagtta 5977141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 71 - 131
Target Start/End: Complemental strand, 11796747 - 11796687
Alignment:
Q  71 ataatggacatgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaaacta 131  Q
    |||||||||||||||||||| || ||| ||||||||||||  |||| ||||||||||||||    
T  11796747 ataatggacatgcaatcaaacggctaatatcatatcaaaagttttaaacattaaaaaacta 11796687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 124 - 204
Target Start/End: Complemental strand, 38471412 - 38471332
Alignment:
Q  124 aaaaactaacagagagaaccacaatagcaaacggatgaagacttatgagaccaaattgagacactttatagttaagagacc 204  Q
    ||||| ||||||||||||||| ||||| ||||||| ||||| |||||  |||||||||| ||| |||| ||||||| ||||    
T  38471412 aaaaattaacagagagaaccaaaatagtaaacggaagaagatttatggaaccaaattgaaacaatttaaagttaagggacc 38471332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 71 - 134
Target Start/End: Original strand, 9170829 - 9170892
Alignment:
Q  71 ataatggacatgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaaca 134  Q
    |||||||||||||||||||||||||||||| |||| |||||  |  |||||||| |||||||||    
T  9170829 ataatggacatgcaatcaaatggttaaaatgatataaaaaatatctgacattaagaaactaaca 9170892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 126 - 197
Target Start/End: Original strand, 15614955 - 15615026
Alignment:
Q  126 aaactaacagagagaaccacaatagcaaacggatgaagacttatgagaccaaattgagacactttatagtta 197  Q
    |||||||||||||| |||| ||||| ||||||  ||| | |||||  |||||||||||||||||||||||||    
T  15614955 aaactaacagagaggaccaaaatagtaaacggcagaaaatttatggaaccaaattgagacactttatagtta 15615026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 89 - 204
Target Start/End: Original strand, 15857576 - 15857691
Alignment:
Q  89 aatggttaaaatcatatcaaaaactttagacattaaaaaactaacagagagaaccacaatagcaaacggatgaagacttatgagaccaaattgagacact 188  Q
    |||||||  ||||||||||||||  ||| |||||||||||||||| ||||  |||| ||| | |||||    |||| ||||| || |||||||| |||||    
T  15857576 aatggttggaatcatatcaaaaatattaaacattaaaaaactaacggagatgaccaaaatggtaaacgacataagatttatgggaacaaattgaaacact 15857675  T
Q  189 ttatagttaagagacc 204  Q
    ||||||||||| ||||    
T  15857676 ttatagttaagggacc 15857691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 73 - 204
Target Start/End: Complemental strand, 19524156 - 19524026
Alignment:
Q  73 aatggacatgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaacagagagaaccacaatagcaaacggatgaagacttatgag 172  Q
    ||||||| ||||||| |||||| ||||  |||||||||   |||||||||||||||| ||| || |  |||| ||| | |||||   ||| | |||| ||    
T  19524156 aatggacctgcaatcgaatggtcaaaacaatatcaaaattattagacattaaaaaacaaacggacatgaccaaaatggtaaacgacagaaaatttat-ag 19524058  T
Q  173 accaaattgagacactttatagttaagagacc 204  Q
    ||||||||||||||||||||||||||| ||||    
T  19524057 accaaattgagacactttatagttaagggacc 19524026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 73 - 132
Target Start/End: Complemental strand, 35047595 - 35047536
Alignment:
Q  73 aatggacatgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaa 132  Q
    ||||||||||||||| |||| ||||||| |||||||||| ||||  ||||||||||||||    
T  35047595 aatggacatgcaatcgaatgattaaaattatatcaaaaaatttaagcattaaaaaactaa 35047536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 67 - 133
Target Start/End: Original strand, 10978212 - 10978278
Alignment:
Q  67 aaacataatggacatgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaac 133  Q
    ||||| ||||| ||||||||| |||||||||||| ||||||||||  ||| |||||||||| |||||    
T  10978212 aaacacaatgggcatgcaatcgaatggttaaaattatatcaaaaatattaaacattaaaaatctaac 10978278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 124 - 197
Target Start/End: Complemental strand, 223349 - 223276
Alignment:
Q  124 aaaaactaacagagagaaccacaatagcaaacggatgaagacttatgagaccaaattgagacactttatagtta 197  Q
    |||||||||  || || |||||| ||| ||||||| ||||||||||| ||||||||| | ||||||||||||||    
T  223349 aaaaactaatggaaaggaccacattagtaaacggaggaagacttatgggaccaaattaatacactttatagtta 223276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 160 - 197
Target Start/End: Complemental strand, 12933838 - 12933801
Alignment:
Q  160 gaagacttatgagaccaaattgagacactttatagtta 197  Q
    |||||||||||||| |||||||||||||||||||||||    
T  12933838 gaagacttatgagatcaaattgagacactttatagtta 12933801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 124 - 197
Target Start/End: Original strand, 19525281 - 19525354
Alignment:
Q  124 aaaaactaacagagagaaccacaatagcaaacggatgaagacttatgagaccaaattgagacactttatagtta 197  Q
    |||||| ||| ||||| |||| ||| | ||||||  ||||||||||| |||||||| |||||||||||||||||    
T  19525281 aaaaacaaacggagaggaccaaaatggtaaacggcagaagacttatgtgaccaaatggagacactttatagtta 19525354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 161 - 197
Target Start/End: Complemental strand, 12947998 - 12947962
Alignment:
Q  161 aagacttatgagaccaaattgagacactttatagtta 197  Q
    ||||||||||||| |||||||||||||||||||||||    
T  12947998 aagacttatgagatcaaattgagacactttatagtta 12947962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 126 - 197
Target Start/End: Original strand, 15510258 - 15510329
Alignment:
Q  126 aaactaacagagagaaccacaatagcaaacggatgaagacttatgagaccaaattgagacactttatagtta 197  Q
    |||||||||||||| |||| || ||  |||||  |||||| || | ||||||||||||||||||||||||||    
T  15510258 aaactaacagagaggaccaaaagaggtaacggcagaagacataagggaccaaattgagacactttatagtta 15510329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 81 - 180
Target Start/End: Original strand, 32735429 - 32735528
Alignment:
Q  81 tgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaacagagagaaccacaatagcaaacggatgaagacttatgagaccaaatt 180  Q
    ||||||||||  ||| |||| |||| |||||  ||||||||||||| |||||||||||  |||| ||||  ||||||  ||||| ||||| |||||||||    
T  32735429 tgcaatcaaactgttgaaattatataaaaaatattagacattaaaatactaacagagatgaccaaaataataaacggcagaagagttatgggaccaaatt 32735528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 73 - 204
Target Start/End: Original strand, 42511608 - 42511739
Alignment:
Q  73 aatggacatgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaacagagagaaccacaatagcaaacggatgaagacttatgag 172  Q
    ||||| ||| ||||| ||||| | |||||||||   |||  ||| |||||| ||||| ||| |||| | ||| ||||| ||||||  ||||| |||||      
T  42511608 aatggtcattcaatctaatggctgaaatcatatttgaaatattatacattagaaaaccaacggagatagccaaaataggaaacggcagaagatttatgga 42511707  T
Q  173 accaaattgagacactttatagttaagagacc 204  Q
    | ||||||||||||||||||||||||| ||||    
T  42511708 agcaaattgagacactttatagttaagggacc 42511739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 62 - 132
Target Start/End: Complemental strand, 4124945 - 4124875
Alignment:
Q  62 ctattaaacataatggacatgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaa 132  Q
    |||||||| | |||||| || |||||||||||||||||| | |||||||  |||| |||||||| ||||||    
T  4124945 ctattaaatacaatggatatacaatcaaatggttaaaattaaatcaaaatttttaaacattaaacaactaa 4124875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 141 - 199
Target Start/End: Original strand, 22819559 - 22819617
Alignment:
Q  141 accacaatagcaaacggatgaagacttatgagaccaaattgagacactttatagttaag 199  Q
    |||| ||||| ||||||  ||||| ||||| |||||||||||||||||| |||||||||    
T  22819559 accaaaatagtaaacggcagaagagttatgggaccaaattgagacacttaatagttaag 22819617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 166 - 204
Target Start/End: Complemental strand, 26403388 - 26403350
Alignment:
Q  166 ttatgagaccaaattgagacactttatagttaagagacc 204  Q
    |||||||| ||||||||||||||||||||||||| ||||    
T  26403388 ttatgagatcaaattgagacactttatagttaagggacc 26403350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 167 - 197
Target Start/End: Original strand, 42980745 - 42980775
Alignment:
Q  167 tatgagaccaaattgagacactttatagtta 197  Q
    |||||||||||||||||||||||||||||||    
T  42980745 tatgagaccaaattgagacactttatagtta 42980775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 123 - 204
Target Start/End: Original strand, 10085837 - 10085918
Alignment:
Q  123 aaaaaactaacagagagaaccacaatagcaaacggatgaagacttatgagaccaaattgagacactttatagttaagagacc 204  Q
    |||| |||||| ||||| |||| ||||| |||  |  ||||| ||||| ||||||||||| |||||||| ||||||||||||    
T  10085837 aaaatactaacggagaggaccaaaatagtaaatagcagaagatttatgggaccaaattgaaacactttaaagttaagagacc 10085918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 160 - 197
Target Start/End: Complemental strand, 18678063 - 18678026
Alignment:
Q  160 gaagacttatgagaccaaattgagacactttatagtta 197  Q
    ||||| ||||| ||||||||||||||||||||||||||    
T  18678063 gaagatttatgggaccaaattgagacactttatagtta 18678026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 124 - 197
Target Start/End: Complemental strand, 21387760 - 21387687
Alignment:
Q  124 aaaaactaacagagagaaccacaatagcaaacggatgaagacttatgagaccaaattgagacactttatagtta 197  Q
    ||||||||||||| || |||| || ||  |||||  ||||| ||||| ||||||||||||||| ||||||||||    
T  21387760 aaaaactaacagacaggaccaaaagaggtaacggcagaagatttatgggaccaaattgagacattttatagtta 21387687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 124 - 204
Target Start/End: Complemental strand, 5383065 - 5382985
Alignment:
Q  124 aaaaactaacagagagaaccacaatagcaaacggatgaagacttatgagaccaaattgagacactttatagttaagagacc 204  Q
    |||||||||| ||||| | || ||||| |||||    |||| ||||| |||||||||||||||||||||| ||| ||||||    
T  5383065 aaaaactaacggagaggatcaaaatagtaaacgaccaaagatttatgggaccaaattgagacactttataattaggagacc 5382985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 81 - 149
Target Start/End: Complemental strand, 12829736 - 12829668
Alignment:
Q  81 tgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaacagagagaaccacaata 149  Q
    ||||||||||  ||| |||||| ||||||||  ||||| ||||||| |||||||||||| ||| |||||    
T  12829736 tgcaatcaaacagttgaaatcaaatcaaaaatattagatattaaaatactaacagagaggaccgcaata 12829668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 81 - 149
Target Start/End: Complemental strand, 12861715 - 12861647
Alignment:
Q  81 tgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaacagagagaaccacaata 149  Q
    ||||||||||  ||| |||||| ||||||||  ||||| ||||||| |||||||||||| ||| |||||    
T  12861715 tgcaatcaaacagttgaaatcaaatcaaaaatattagatattaaaatactaacagagaggaccgcaata 12861647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 161 - 197
Target Start/End: Original strand, 12936132 - 12936168
Alignment:
Q  161 aagacttatgagaccaaattgagacactttatagtta 197  Q
    |||||||||  ||||||||||||||||||||||||||    
T  12936132 aagacttattggaccaaattgagacactttatagtta 12936168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 161 - 197
Target Start/End: Original strand, 12950290 - 12950326
Alignment:
Q  161 aagacttatgagaccaaattgagacactttatagtta 197  Q
    |||||||||  ||||||||||||||||||||||||||    
T  12950290 aagacttattggaccaaattgagacactttatagtta 12950326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 124 - 204
Target Start/End: Complemental strand, 18693821 - 18693741
Alignment:
Q  124 aaaaactaacagagagaaccacaatagcaaacggatgaagacttatgagaccaaattgagacactttatagttaagagacc 204  Q
    |||||||||||||||| |||| || ||  ||||   ||||| ||||| ||||| ||||||||| |||||||||||| ||||    
T  18693821 aaaaactaacagagaggaccaaaagaggtaacgacagaagatttatgggaccagattgagacattttatagttaagggacc 18693741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 160 - 196
Target Start/End: Complemental strand, 30253673 - 30253637
Alignment:
Q  160 gaagacttatgagaccaaattgagacactttatagtt 196  Q
    ||||||||||||||||||||||| |||||| ||||||    
T  30253673 gaagacttatgagaccaaattgacacacttaatagtt 30253637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 81 - 197
Target Start/End: Original strand, 38473505 - 38473621
Alignment:
Q  81 tgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaacagagagaaccacaatagcaaacggatgaagacttatgagaccaaatt 180  Q
    ||||||||| |||||||||| ||||||| |    || ||||||||||| |||| || |  |||| ||||| |||||   ||||| ||||| |||||||||    
T  38473505 tgcaatcaagtggttaaaatgatatcaagattaatatacattaaaaaattaacggaaatgaccaaaatagtaaacgacagaagatttatgggaccaaatt 38473604  T
Q  181 gagacactttatagtta 197  Q
     |||||||||| |||||    
T  38473605 aagacactttacagtta 38473621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 110; Significance: 3e-55; HSPs: 51)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 10 - 197
Target Start/End: Original strand, 46795904 - 46796092
Alignment:
Q  10 aggagcagagagaagatgatgaaaagtgnnnnnnntttaggtgccaacggttc--tattaaacataatggacatgcaatcaaatggttaaaatcatatca 107  Q
    ||||| ||||||||||||||||||||||       || ||||||| |||||||  ||||||| | |||||||||||||||||||||||||||||||||||    
T  46795904 aggagaagagagaagatgatgaaaagtgaaaaaaatt-aggtgccgacggttcactattaaatacaatggacatgcaatcaaatggttaaaatcatatca 46796002  T
Q  108 aaaactttagacattaaaaaactaacagagagaaccacaatagcaaacggatgaagacttatgagaccaaattgagacactttatagtta 197  Q
    |||| ||||||||||||||||||||| ||||| |||||||||| ||||||| ||||||||||| ||||||||||||||||||||||||||    
T  46796003 aaaaatttagacattaaaaaactaacggagaggaccacaatagtaaacggaggaagacttatgggaccaaattgagacactttatagtta 46796092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 73 - 197
Target Start/End: Complemental strand, 47667352 - 47667228
Alignment:
Q  73 aatggacatgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaacagagagaaccacaatagcaaacggatgaagacttatgag 172  Q
    |||||||||||||||||||||||||||||| || ||||| |||||||||||||||||||||  |||| |||| | ||| ||||||| |||||||||||||    
T  47667352 aatggacatgcaatcaaatggttaaaatcacataaaaaaatttagacattaaaaaactaacgcagaggaccatattagtaaacggaggaagacttatgag 47667253  T
Q  173 accaaattgagacactttatagtta 197  Q
    |||||||||||||||||||||||||    
T  47667252 accaaattgagacactttatagtta 47667228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 62 - 197
Target Start/End: Complemental strand, 38554114 - 38553979
Alignment:
Q  62 ctattaaacataatggacatgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaacagagagaaccacaatagcaaacggatga 161  Q
    |||||||| | ||||||| ||| ||||||||||||||||||||||||||| ||||||||||||||||||||  ||||  || ||| ||| ||||||| ||    
T  38554114 ctattaaatacaatggacgtgcgatcaaatggttaaaatcatatcaaaaaatttagacattaaaaaactaatggagatgactacattagtaaacggagga 38554015  T
Q  162 agacttatgagaccaaattgagacactttatagtta 197  Q
    ||||||||||||||||||||||||||||||||||||    
T  38554014 agacttatgagaccaaattgagacactttatagtta 38553979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 73 - 197
Target Start/End: Original strand, 307747 - 307871
Alignment:
Q  73 aatggacatgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaacagagagaaccacaatagcaaacggatgaagacttatgag 172  Q
    |||||||||||||||| |||||||||||||||||||||| |||| |||||||||||| ||| ||||  |||||||||| ||| ||| ||||||||||| |    
T  307747 aatggacatgcaatcatatggttaaaatcatatcaaaaaatttaaacattaaaaaaccaacggagatgaccacaatagtaaatggaggaagacttatggg 307846  T
Q  173 accaaattgagacactttatagtta 197  Q
    | |||||||||||||||||||||||    
T  307847 atcaaattgagacactttatagtta 307871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 73 - 199
Target Start/End: Complemental strand, 3528364 - 3528238
Alignment:
Q  73 aatggacatgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaacagagagaaccacaatagcaaacggatgaagacttatgag 172  Q
    |||||||||||||||||||||||||||||| || |||||  |||||||||||||||||||  ||||| || ||| ||| |||| || ||| ||||||| |    
T  3528364 aatggacatgcaatcaaatggttaaaatcacataaaaaaaattagacattaaaaaactaatggagaggactacattagtaaacagaggaaaacttatggg 3528265  T
Q  173 accaaattgagacactttatagttaag 199  Q
    |||||||||||||||||||||||||||    
T  3528264 accaaattgagacactttatagttaag 3528238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 73 - 199
Target Start/End: Complemental strand, 41348413 - 41348287
Alignment:
Q  73 aatggacatgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaacagagagaaccacaatagcaaacggatgaagacttatgag 172  Q
    |||||||||||||||||||| |||||||||||||||||| |||| ||||||||||||||| |||||| |||||| ||  ||| ||| ||||||||||| |    
T  41348413 aatggacatgcaatcaaatgattaaaatcatatcaaaaattttatacattaaaaaactaatagagaggaccacattaataaatggaggaagacttatggg 41348314  T
Q  173 accaaattgagacactttatagttaag 199  Q
    | |||||||| |||||| |||||||||    
T  41348313 atcaaattgacacacttaatagttaag 41348287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 73 - 197
Target Start/End: Original strand, 29665516 - 29665639
Alignment:
Q  73 aatggacatgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaacagagagaaccacaatagcaaacggatgaagacttatgag 172  Q
    |||||||||||||||||||||||||||||| |||||||| |||||||||||||||| |||| ||||  || ||| ||| ||||||| ||| ||||||| |    
T  29665516 aatggacatgcaatcaaatggttaaaatcacatcaaaaaatttagacattaaaaaattaacggagatgactacattagtaaacggaggaaaacttatggg 29665615  T
Q  173 accaaattgagacactttatagtta 197  Q
    |||||||| ||||| ||||||||||    
T  29665616 accaaattaagaca-tttatagtta 29665639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 73 - 197
Target Start/End: Original strand, 56001211 - 56001334
Alignment:
Q  73 aatggacatgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaacagagagaaccacaatagcaaacggatgaagacttatgag 172  Q
    |||||||||||||||||||||||||||||| || ||||| || ||||||||||||||||||  |||| |||||| ||| ||||||| |||  |||||  |    
T  56001211 aatggacatgcaatcaaatggttaaaatcacataaaaaaatt-agacattaaaaaactaacgaagaggaccacattagtaaacggaggaaagcttatagg 56001309  T
Q  173 accaaattgagacactttatagtta 197  Q
    |||||||||||||||||||||||||    
T  56001310 accaaattgagacactttatagtta 56001334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 124 - 199
Target Start/End: Complemental strand, 34438529 - 34438454
Alignment:
Q  124 aaaaactaacagagagaaccacaatagcaaacggatgaagacttatgagaccaaattgagacactttatagttaag 199  Q
    ||||||||||||||||||||| ||||| ||||||  ||||| ||||| ||||||||||||||||||||||||||||    
T  34438529 aaaaactaacagagagaaccaaaatagtaaacggcagaagatttatgggaccaaattgagacactttatagttaag 34438454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 71 - 138
Target Start/End: Complemental strand, 52137605 - 52137538
Alignment:
Q  71 ataatggacatgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaacagaga 138  Q
    |||||||||||||||||||| |||||||||||||||||||| |||||||||| |||||||||| ||||    
T  52137605 ataatggacatgcaatcaaacggttaaaatcatatcaaaaaatttagacattgaaaaactaacggaga 52137538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 65 - 127
Target Start/End: Original strand, 36846491 - 36846553
Alignment:
Q  65 ttaaacataatggacatgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaa 127  Q
    ||||| |||||||||||||||||||||||||||||||| |||||||| |||||||||||||||    
T  36846491 ttaaatataatggacatgcaatcaaatggttaaaatcaaatcaaaaaatttagacattaaaaa 36846553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 73 - 204
Target Start/End: Original strand, 28103428 - 28103559
Alignment:
Q  73 aatggacatgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaacagagagaaccacaatagcaaacggatgaagacttatgag 172  Q
    ||||||| ||||||| ||||||| |||  ||||||||||   || |||||||||||| ||| || || |||| ||| | ||||||  |||| |||||| |    
T  28103428 aatggacttgcaatcgaatggttgaaacaatatcaaaaatagtaaacattaaaaaacaaacggaaaggaccaaaatggtaaacggcagaagtcttatggg 28103527  T
Q  173 accaaattgagacactttatagttaagagacc 204  Q
    ||||||||||||||||||||||||||| ||||    
T  28103528 accaaattgagacactttatagttaagggacc 28103559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 74 - 199
Target Start/End: Complemental strand, 11113915 - 11113790
Alignment:
Q  74 atggacatgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaacagagagaaccacaatagcaaacggatgaagacttatgaga 173  Q
    |||||| ||||||| || ||||| ||| |||| |||||  ||||||||  |||||||||| || |  |||| ||| | ||||||  ||||| ||||||||    
T  11113915 atggacctgcaatcgaacggttataattatattaaaaatattagacatctaaaaactaacggaaatgaccaaaatggtaaacggcagaagagttatgaga 11113816  T
Q  174 ccaaattgagacactttatagttaag 199  Q
    ||||||||||||||||||||||||||    
T  11113815 ccaaattgagacactttatagttaag 11113790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 62 - 133
Target Start/End: Complemental strand, 35348985 - 35348914
Alignment:
Q  62 ctattaaacataatggacatgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaac 133  Q
    |||||||||  ||||||||  |||||||||||||||||||| |||||||| ||||||||||||||| |||||    
T  35348985 ctattaaacgcaatggacactcaatcaaatggttaaaatcaaatcaaaaattttagacattaaaaagctaac 35348914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 73 - 204
Target Start/End: Complemental strand, 38417727 - 38417596
Alignment:
Q  73 aatggacatgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaacagagagaaccacaatagcaaacggatgaagacttatgag 172  Q
    ||||||| |||||||||| |||| ||||||||| ||||| | || ||||||||| |||||| ||||| |||  ||||| |||||    |||| ||||| |    
T  38417727 aatggacctgcaatcaaacggttgaaatcatattaaaaaatctaaacattaaaatactaacggagaggaccgaaatagtaaacgacataagatttatggg 38417628  T
Q  173 accaaattgagacactttatagttaagagacc 204  Q
    |||||||||| |||||| ||||||||| ||||    
T  38417627 accaaattgacacacttaatagttaagggacc 38417596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 62 - 133
Target Start/End: Complemental strand, 39056613 - 39056542
Alignment:
Q  62 ctattaaacataatggacatgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaac 133  Q
    |||||||||  ||||||||  |||||||||||||||||||| |||||||| ||||||||||||||| |||||    
T  39056613 ctattaaacgcaatggacactcaatcaaatggttaaaatcaaatcaaaaattttagacattaaaaagctaac 39056542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 123 - 198
Target Start/End: Original strand, 40146615 - 40146690
Alignment:
Q  123 aaaaaactaacagagagaaccacaatagcaaacggatgaagacttatgagaccaaattgagacactttatagttaa 198  Q
    ||||||||||| ||||  |||||| ||| || |||| ||||||||||| |||||||||||||||||||||||||||    
T  40146615 aaaaaactaacggagatgaccacattagtaatcggaagaagacttatgggaccaaattgagacactttatagttaa 40146690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 74 - 204
Target Start/End: Complemental strand, 43418206 - 43418076
Alignment:
Q  74 atggacatgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaacagagagaaccacaatagcaaacggatgaagacttatgaga 173  Q
    |||||| ||||||||||||||| |||||| ||||||||  ||||||||||||| |||||| ||||  |||  |||||  ||| || ||| || || | |     
T  43418206 atggacttgcaatcaaatggttgaaatcaaatcaaaaatattagacattaaaatactaacggagatgaccgaaatagataacagaagaatacataagggg 43418107  T
Q  174 ccaaattgagacactttatagttaagagacc 204  Q
    ||||||||| |||||||||||||||| ||||    
T  43418106 ccaaattgaaacactttatagttaagggacc 43418076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 73 - 198
Target Start/End: Complemental strand, 31711266 - 31711141
Alignment:
Q  73 aatggacatgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaacagagagaaccacaatagcaaacggatgaagacttatgag 172  Q
    ||||||| ||||||| ||||||| |||  ||||||||||   || |||||||||||| ||| || || | || ||| | |||||    ||||||||||||    
T  31711266 aatggacttgcaatcgaatggttgaaacaatatcaaaaatagtaaacattaaaaaacaaacggaaaggatcaaaatggtaaacgacataagacttatgag 31711167  T
Q  173 accaaattgagacactttatagttaa 198  Q
    ||||||||||||||||||||||||||    
T  31711166 accaaattgagacactttatagttaa 31711141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 73 - 197
Target Start/End: Original strand, 21104252 - 21104376
Alignment:
Q  73 aatggacatgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaacagagagaaccacaatagcaaacggatgaagacttatgag 172  Q
    ||||||| ||||||| ||||||| |||  ||||||||||   || |||||||||| | ||| || || |||| ||| | |||||   |||||| ||||||    
T  21104252 aatggacctgcaatcgaatggttgaaacaatatcaaaaatagtaaacattaaaaagcaaacggaaaggaccaaaatggtaaacgacagaagacatatgag 21104351  T
Q  173 accaaattgagacactttatagtta 197  Q
    |||||||||||||||||||||||||    
T  21104352 accaaattgagacactttatagtta 21104376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 141 - 197
Target Start/End: Complemental strand, 40143760 - 40143704
Alignment:
Q  141 accacaatagcaaacggatgaagacttatgagaccaaattgagacactttatagtta 197  Q
    |||||| ||| ||||||||||||| |||||||| |||||||||||||||||||||||    
T  40143760 accacattagtaaacggatgaagagttatgagagcaaattgagacactttatagtta 40143704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 73 - 133
Target Start/End: Original strand, 44499923 - 44499983
Alignment:
Q  73 aatggacatgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaac 133  Q
    |||||||||||||||||| ||||||||||| |||||||| | |||||||||| ||||||||    
T  44499923 aatggacatgcaatcaaacggttaaaatcaaatcaaaaaatatagacattaacaaactaac 44499983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 122 - 197
Target Start/End: Original strand, 33377355 - 33377430
Alignment:
Q  122 taaaaaactaacagagagaaccacaatagcaaacggatgaagacttatgagaccaaattgagacactttatagtta 197  Q
    ||||| |||||| ||||| |||| ||||| ||||||  ||||| ||||| ||||||||||||||||||||||||||    
T  33377355 taaaatactaacggagaggaccaaaatagtaaacggcagaagatttatgggaccaaattgagacactttatagtta 33377430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 120 - 191
Target Start/End: Original strand, 56297668 - 56297739
Alignment:
Q  120 attaaaaaactaacagagagaaccacaatagcaaacggatgaagacttatgagaccaaattgagacacttta 191  Q
    |||||||||||||| ||||| |||||| ||| |||| |||| | ||||||||||||||||||||||| ||||    
T  56297668 attaaaaaactaacggagaggaccacattagtaaacagatgtatacttatgagaccaaattgagacagttta 56297739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 123 - 197
Target Start/End: Original strand, 1273425 - 1273499
Alignment:
Q  123 aaaaaactaacagagagaaccacaatagcaaacggatgaagacttatgagaccaaattgagacactttatagtta 197  Q
    |||| |||||| ||||| |||| |||||||||||    |||||||||| ||||||||||||||||||||||||||    
T  1273425 aaaatactaacggagaggaccaaaatagcaaacgacataagacttatgggaccaaattgagacactttatagtta 1273499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 71 - 133
Target Start/End: Original strand, 36244704 - 36244766
Alignment:
Q  71 ataatggacatgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaac 133  Q
    |||||||||||||||||||| || ||| ||||||||||| | |||| ||||||||||||||||    
T  36244704 ataatggacatgcaatcaaacggctaatatcatatcaaacattttaaacattaaaaaactaac 36244766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 71 - 133
Target Start/End: Complemental strand, 56157114 - 56157052
Alignment:
Q  71 ataatggacatgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaac 133  Q
    ||||||||||||||| |||| || ||| ||||||||||||| |||| ||||||||||||||||    
T  56157114 ataatggacatgcaaccaaacggctaatatcatatcaaaaattttaaacattaaaaaactaac 56157052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 72 - 144
Target Start/End: Complemental strand, 2292325 - 2292253
Alignment:
Q  72 taatggacatgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaacagagagaacca 144  Q
    |||| |||||||||||  |||||| |||| ||||||||||  |||| ||||||||||||||||||||| ||||    
T  2292325 taatagacatgcaatctgatggttgaaattatatcaaaaatattagtcattaaaaaactaacagagaggacca 2292253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 77 - 133
Target Start/End: Complemental strand, 26495295 - 26495239
Alignment:
Q  77 gacatgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaac 133  Q
    |||||||||||||| || ||| ||||||||||||| |||| ||||||||||||||||    
T  26495295 gacatgcaatcaaacggctaatatcatatcaaaaattttaaacattaaaaaactaac 26495239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 77 - 125
Target Start/End: Original strand, 26631162 - 26631210
Alignment:
Q  77 gacatgcaatcaaatggttaaaatcatatcaaaaactttagacattaaa 125  Q
    ||||||||||||| |||||||||||| |||||||| |||||||||||||    
T  26631162 gacatgcaatcaagtggttaaaatcaaatcaaaaaatttagacattaaa 26631210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 69 - 197
Target Start/End: Complemental strand, 27408941 - 27408813
Alignment:
Q  69 acataatggacatgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaacagagagaaccacaatagcaaacggatgaagactta 168  Q
    ||||||| ||| ||||||| ||||||  ||| ||||| |||||  ||||| ||||||||||  || ||    |||| ||| | ||||||| ||||| |||    
T  27408941 acataatagacctgcaatcgaatggtcgaaaacatattaaaaatattagatattaaaaaacacacggacgtgaccaaaatggtaaacggaagaagattta 27408842  T
Q  169 tgagaccaaattgagacactttatagtta 197  Q
    || ||||||||||||||||||||||||||    
T  27408841 tgggaccaaattgagacactttatagtta 27408813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 81 - 204
Target Start/End: Complemental strand, 6139163 - 6139040
Alignment:
Q  81 tgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaacagagagaaccacaatagcaaacggatgaagacttatgagaccaaatt 180  Q
    |||||||||| |||| |||| |||| |||||  ||||||||||||| |||||||||||  |||| ||||  ||||     |||| |||||||||||||||    
T  6139163 tgcaatcaaacggttgaaattatataaaaaatattagacattaaaatactaacagagatgaccaaaataataaacaacataagagttatgagaccaaatt 6139064  T
Q  181 gagacactttatagttaagagacc 204  Q
    |||||| || ||| ||||| ||||    
T  6139063 gagacatttaataattaagggacc 6139040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 98 - 197
Target Start/End: Original strand, 15787469 - 15787568
Alignment:
Q  98 aatcatatcaaaaactttagacattaaaaaactaacagagagaaccacaatagcaaacggatgaagacttatgagaccaaattgagacactttatagtta 197  Q
    |||||||| |||||  ||||||||||||||| |||  ||||| |||| ||| | ||||||   || | ||||| ||||||||||||||||||||||||||    
T  15787469 aatcatattaaaaatattagacattaaaaaattaatggagaggaccaaaatggtaaacggcaaaaaagttatgggaccaaattgagacactttatagtta 15787568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 73 - 204
Target Start/End: Original strand, 34439602 - 34439733
Alignment:
Q  73 aatggacatgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaacagagagaaccacaatagcaaacggatgaagacttatgag 172  Q
    ||||| ||| ||||| ||||| | |||||||||   |||  ||| |||||| ||||||||| ||||  |||| ||||| ||||||  ||||| ||||| |    
T  34439602 aatggtcattcaatctaatggctgaaatcatatttgaaatattatacattagaaaactaacggagatgaccaaaatagtaaacggcagaagatttatggg 34439701  T
Q  173 accaaattgagacactttatagttaagagacc 204  Q
    |||||||||| ||| |||||||||||| ||||    
T  34439702 accaaattgaaacattttatagttaagggacc 34439733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 71 - 133
Target Start/End: Original strand, 8363326 - 8363388
Alignment:
Q  71 ataatggacatgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaac 133  Q
    |||||||||||||||||||| |   || ||||||||||||| |||| ||||||||||||||||    
T  8363326 ataatggacatgcaatcaaacgacgaatatcatatcaaaaattttaaacattaaaaaactaac 8363388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 152 - 197
Target Start/End: Complemental strand, 26376424 - 26376379
Alignment:
Q  152 aaacggatgaagacttatgagaccaaattgagacactttatagtta 197  Q
    ||||||||||||||||||| ||||||||||||||  ||||||||||    
T  26376424 aaacggatgaagacttatgggaccaaattgagacgttttatagtta 26376379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 160 - 204
Target Start/End: Original strand, 30683056 - 30683100
Alignment:
Q  160 gaagacttatgagaccaaattgagacactttatagttaagagacc 204  Q
    ||||| ||||| |||||||||||||||||||||||||||| ||||    
T  30683056 gaagatttatgggaccaaattgagacactttatagttaagggacc 30683100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 124 - 204
Target Start/End: Original strand, 48207710 - 48207790
Alignment:
Q  124 aaaaactaacagagagaaccacaatagcaaacggatgaagacttatgagaccaaattgagacactttatagttaagagacc 204  Q
    ||||| |||||||| | |||||||| | ||||||  ||||| ||||  |||||||||||||||||||||| ||| ||||||    
T  48207710 aaaaaataacagaggggaccacaattgtaaacggtagaagagttatatgaccaaattgagacactttataattaggagacc 48207790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 161 - 204
Target Start/End: Complemental strand, 5687261 - 5687218
Alignment:
Q  161 aagacttatgagaccaaattgagacactttatagttaagagacc 204  Q
    |||| ||||| |||||||||||||||||||||||||||| ||||    
T  5687261 aagatttatgggaccaaattgagacactttatagttaagggacc 5687218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 74 - 133
Target Start/End: Complemental strand, 39591114 - 39591055
Alignment:
Q  74 atggacatgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaac 133  Q
    |||||| |||||||||| ||||| |||||||| |||||  |||||||| |||||||||||    
T  39591114 atggacctgcaatcaaacggttataatcatattaaaaatattagacataaaaaaactaac 39591055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 75 - 133
Target Start/End: Original strand, 1521126 - 1521183
Alignment:
Q  75 tggacatgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaac 133  Q
    ||||||| |||||||||||||||||| | || ||||| |||||||||||||||| ||||    
T  1521126 tggacatacaatcaaatggttaaaataaaat-aaaaaatttagacattaaaaaattaac 1521183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 159 - 197
Target Start/End: Original strand, 10403445 - 10403483
Alignment:
Q  159 tgaagacttatgagaccaaattgagacactttatagtta 197  Q
    |||||| ||||||||||||||||| ||||||||||||||    
T  10403445 tgaagatttatgagaccaaattgatacactttatagtta 10403483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 73 - 111
Target Start/End: Complemental strand, 26376484 - 26376446
Alignment:
Q  73 aatggacatgcaatcaaatggttaaaatcatatcaaaaa 111  Q
    |||| ||||||||||||||||||||||||| ||||||||    
T  26376484 aatgtacatgcaatcaaatggttaaaatcacatcaaaaa 26376446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 160 - 198
Target Start/End: Original strand, 26393156 - 26393194
Alignment:
Q  160 gaagacttatgagaccaaattgagacactttatagttaa 198  Q
    ||||| ||||| |||||||||||||||||||||||||||    
T  26393156 gaagagttatgggaccaaattgagacactttatagttaa 26393194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 135 - 197
Target Start/End: Original strand, 27410687 - 27410748
Alignment:
Q  135 gagagaaccacaatagcaaacggatgaagacttatgagaccaaattgagacactttatagtta 197  Q
    ||||| |||| ||| | ||||||| ||||| ||||| ||||||||||||||||||||||||||    
T  27410687 gagaggaccaaaatggtaaacggaagaagatttatg-gaccaaattgagacactttatagtta 27410748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 71 - 197
Target Start/End: Original strand, 44304919 - 44305045
Alignment:
Q  71 ataatggacatgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaacagagagaaccacaatagcaaacggatgaagacttatg 170  Q
    ||||||||| | ||||| ||| ||| ||||||||||| | |  ||| | ||||||||| |||| ||||  |||| ||||| |||| |  ||||| ||||     
T  44304919 ataatggacctacaatcgaattgttgaaatcatatcagagatgttaaaaattaaaaaattaacggagatgaccaaaatagtaaacagcggaagatttata 44305018  T
Q  171 agaccaaattgagacactttatagtta 197  Q
     ||||||||||||||||||| ||||||    
T  44305019 ggaccaaattgagacactttgtagtta 44305045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 124 - 193
Target Start/End: Original strand, 15446663 - 15446732
Alignment:
Q  124 aaaaactaacagagagaaccacaatagcaaacggatgaagacttatgagaccaaattgagacactttata 193  Q
    |||||||||| ||||| |||| ||||| ||||||  ||| | ||||| ||||||||||| ||||||||||    
T  15446663 aaaaactaacggagaggaccaaaatagtaaacggtagaaaatttatgggaccaaattgaaacactttata 15446732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 76 - 133
Target Start/End: Complemental strand, 49895215 - 49895158
Alignment:
Q  76 ggacatgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaac 133  Q
    |||| |||||||||||||||| ||||| ||||||||  |||| |||||| ||||||||    
T  49895215 ggacctgcaatcaaatggttagaatcaaatcaaaaaaattaggcattaagaaactaac 49895158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 160 - 204
Target Start/End: Complemental strand, 30682807 - 30682763
Alignment:
Q  160 gaagacttatgagaccaaattgagacactttatagttaagagacc 204  Q
    ||||| |||| |||||||||| |||||||||||||||||| ||||    
T  30682807 gaagatttataagaccaaattaagacactttatagttaagggacc 30682763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 161 - 197
Target Start/End: Original strand, 37560329 - 37560365
Alignment:
Q  161 aagacttatgagaccaaattgagacactttatagtta 197  Q
    |||| ||||| ||||||||||||||||||||||||||    
T  37560329 aagatttatgggaccaaattgagacactttatagtta 37560365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 161 - 197
Target Start/End: Complemental strand, 55952911 - 55952875
Alignment:
Q  161 aagacttatgagaccaaattgagacactttatagtta 197  Q
    |||| ||||||||||||||||| ||||||||||||||    
T  55952911 aagagttatgagaccaaattgaaacactttatagtta 55952875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 103; Significance: 5e-51; HSPs: 46)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 46 - 197
Target Start/End: Complemental strand, 41515199 - 41515046
Alignment:
Q  46 ttaggtgccaacggttc--tattaaacataatggacatgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaacagagagaacc 143  Q
    ||||||||| |||||||  ||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||| |||||||||    
T  41515199 ttaggtgccgacggttcactattaaatataatggacatgcaatcaaatggttaaaatcatataaaaaactttagacattaaaaaattaacggagagaacc 41515100  T
Q  144 acaatagcaaacggatgaagacttatgagaccaaattgagacactttatagtta 197  Q
    ||||||| ||||  ||||||||||||| ||||||||||| ||||||||||||||    
T  41515099 acaatagtaaacatatgaagacttatgggaccaaattgaaacactttatagtta 41515046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 46 - 204
Target Start/End: Original strand, 28326303 - 28326463
Alignment:
Q  46 ttaggtgccaacggttc--tattaaacataatggacatgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaacagagagaacc 143  Q
    ||||||||| |||||||  ||||||| ||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||| ||||| |||    
T  28326303 ttaggtgccgacggttcactattaaatataatggacatgcaatcaaatggttaaaatcatattaaaaaatttagacattaaaaaactaacggagaggacc 28326402  T
Q  144 acaatagcaaacggatgaagacttatgagaccaaattgagacactttatagttaagagacc 204  Q
    ||||||| ||||||| ||||||||||   ||||||||||||||||||||||| | ||||||    
T  28326403 acaatagtaaacggaggaagacttatagaaccaaattgagacactttatagtcaggagacc 28326463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 73 - 197
Target Start/End: Original strand, 45721708 - 45721832
Alignment:
Q  73 aatggacatgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaacagagagaaccacaatagcaaacggatgaagacttatgag 172  Q
    |||| ||||||||||||||||||||||||| || ||||| ||||||||||||||||||||| ||||| | |||| ||| ||||||| ||| |||||||      
T  45721708 aatgaacatgcaatcaaatggttaaaatcacataaaaaaatttagacattaaaaaactaacggagaggatcacattagtaaacggaggaaaacttatgga 45721807  T
Q  173 accaaattgagacactttatagtta 197  Q
    |||||||||||||||||||||||||    
T  45721808 accaaattgagacactttatagtta 45721832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 62 - 133
Target Start/End: Original strand, 17288173 - 17288244
Alignment:
Q  62 ctattaaacataatggacatgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaac 133  Q
    |||||||| | ||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||    
T  17288173 ctattaaatacaatggacatgcaatcaaatagttaaaatcatatcaaaaaatttagacattaaaaaactaac 17288244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 71 - 138
Target Start/End: Original strand, 35296755 - 35296822
Alignment:
Q  71 ataatggacatgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaacagaga 138  Q
    |||||||||||||||||||| |||||||||||||||||||| |||||||||||||||| |||| ||||    
T  35296755 ataatggacatgcaatcaaacggttaaaatcatatcaaaaaatttagacattaaaaaattaacggaga 35296822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 75 - 196
Target Start/End: Original strand, 13446602 - 13446723
Alignment:
Q  75 tggacatgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaacagagagaaccacaatagcaaacggatgaagacttatgagac 174  Q
    ||||||||||||| ||||||| ||||||||| | |||  ||| |||||||||||||||| ||||| ||||  |||  ||||||  ||||| ||||| |||    
T  13446602 tggacatgcaatcgaatggttgaaatcatatgagaaatgttacacattaaaaaactaacggagaggaccaatataataaacggcagaagatttatgggac 13446701  T
Q  175 caaattgagacactttatagtt 196  Q
    |||||||||||||| |||||||    
T  13446702 caaattgagacactatatagtt 13446723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 71 - 133
Target Start/End: Complemental strand, 32653642 - 32653580
Alignment:
Q  71 ataatggacatgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaac 133  Q
    |||||||||||||||||||| ||||||||| |||||||||| ||||| |||||||||||||||    
T  32653642 ataatggacatgcaatcaaacggttaaaatgatatcaaaaattttagtcattaaaaaactaac 32653580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 124 - 197
Target Start/End: Original strand, 33459536 - 33459609
Alignment:
Q  124 aaaaactaacagagagaaccacaatagcaaacggatgaagacttatgagaccaaattgagacactttatagtta 197  Q
    ||||||||||||| |  |||||| ||| ||||||| ||||||||||| ||||||||||||||||||||||||||    
T  33459536 aaaaactaacagaaaagaccacattagtaaacggaggaagacttatgggaccaaattgagacactttatagtta 33459609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 62 - 133
Target Start/End: Complemental strand, 10956033 - 10955962
Alignment:
Q  62 ctattaaacataatggacatgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaac 133  Q
    |||||||||  ||||||||  |||||||||||||||||||| |||||||| ||||||||||||||| |||||    
T  10956033 ctattaaacgcaatggacactcaatcaaatggttaaaatcaaatcaaaaattttagacattaaaaatctaac 10955962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 82 - 197
Target Start/End: Original strand, 24873548 - 24873663
Alignment:
Q  82 gcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaacagagagaaccacaatagcaaacggatgaagacttatgagaccaaattg 181  Q
    |||||||||||||| |||  ||||||||||   || |||||||||||| ||| || |  |||| ||| | ||||||  ||||||||||| ||||||||||    
T  24873548 gcaatcaaatggttgaaacaatatcaaaaatagtaaacattaaaaaacaaacggaaatgaccaaaatggtaaacggcagaagacttatgggaccaaattg 24873647  T
Q  182 agacactttatagtta 197  Q
    ||||||||||||||||    
T  24873648 agacactttatagtta 24873663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 66 - 133
Target Start/End: Original strand, 29589202 - 29589269
Alignment:
Q  66 taaacataatggacatgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaac 133  Q
    |||| |||||||| ||| ||||||||||||||||||| |||||||| |||| ||||||||||||||||    
T  29589202 taaatataatggatatgaaatcaaatggttaaaatcaaatcaaaaattttaaacattaaaaaactaac 29589269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 76 - 133
Target Start/End: Original strand, 43442705 - 43442762
Alignment:
Q  76 ggacatgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaac 133  Q
    |||||||||||||||| |||||||||| |||||||| |||||||||||||| ||||||    
T  43442705 ggacatgcaatcaaattgttaaaatcaaatcaaaaaatttagacattaaaagactaac 43442762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 65 - 133
Target Start/End: Complemental strand, 25532326 - 25532258
Alignment:
Q  65 ttaaacataatggacatgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaac 133  Q
    ||||| ||||||||| ||||||| ||||||| |||||||||||||||  ||| ||||||||||||||||    
T  25532326 ttaaatataatggacctgcaatcgaatggttgaaatcatatcaaaaatattaaacattaaaaaactaac 25532258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 73 - 133
Target Start/End: Original strand, 26146646 - 26146706
Alignment:
Q  73 aatggacatgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaac 133  Q
    |||||||||||||||   ||||||||||||||||||||| |||||||||||||||| ||||    
T  26146646 aatggacatgcaatcgggtggttaaaatcatatcaaaaagtttagacattaaaaaaataac 26146706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 124 - 204
Target Start/End: Original strand, 46458706 - 46458786
Alignment:
Q  124 aaaaactaacagagagaaccacaatagcaaacggatgaagacttatgagaccaaattgagacactttatagttaagagacc 204  Q
    |||||| ||| ||||| |||| ||| | ||||||| ||||| ||||| |||||||||||||||||||||||||||| ||||    
T  46458706 aaaaacaaacggagaggaccaaaatggtaaacggaagaagatttatgggaccaaattgagacactttatagttaagggacc 46458786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 73 - 132
Target Start/End: Complemental strand, 3330869 - 3330810
Alignment:
Q  73 aatggacatgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaa 132  Q
    |||| ||||||||||||| ||||||||||| |||||||| |||||||||||| |||||||    
T  3330869 aatgaacatgcaatcaaacggttaaaatcaaatcaaaaaatttagacattaacaaactaa 3330810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 71 - 133
Target Start/End: Complemental strand, 666905 - 666843
Alignment:
Q  71 ataatggacatgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaac 133  Q
    ||||| |||||||||| ||||||||||||||| |||||||| ||| |||||||||| ||||||    
T  666905 ataatagacatgcaattaaatggttaaaatcaaatcaaaaaatttcgacattaaaatactaac 666843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 71 - 133
Target Start/End: Original strand, 41329407 - 41329469
Alignment:
Q  71 ataatggacatgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaac 133  Q
    |||||||||||||||||||| |||||| |||| |||||||| |||| |||||||||| |||||    
T  41329407 ataatggacatgcaatcaaacggttaatatcacatcaaaaaatttaaacattaaaaatctaac 41329469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 84 - 197
Target Start/End: Original strand, 40926472 - 40926585
Alignment:
Q  84 aatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaacagagagaaccacaatagcaaacggatgaagacttatgagaccaaattgag 183  Q
    ||||||| ||||| |||||||| |||||  ||||||||||||||  |||| ||||| |||| ||  | ||||||  ||| | ||||  ||||||||||||    
T  40926472 aatcaaacggttataatcatattaaaaatattagacattaaaaagttaacggagaggaccaaaacggtaaacggtagaaaatttataggaccaaattgag 40926571  T
Q  184 acactttatagtta 197  Q
    ||||||||||||||    
T  40926572 acactttatagtta 40926585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 153 - 197
Target Start/End: Original strand, 17288242 - 17288286
Alignment:
Q  153 aacggatgaagacttatgagaccaaattgagacactttatagtta 197  Q
    |||||| ||||||||||| ||||||||||||||||||||||||||    
T  17288242 aacggaggaagacttatgggaccaaattgagacactttatagtta 17288286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 69 - 197
Target Start/End: Complemental strand, 25153836 - 25153708
Alignment:
Q  69 acataatggacatgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaacagagagaaccacaatagcaaacggatgaagactta 168  Q
    ||||||| ||| ||||||| || |||  ||| |||||||||||  ||||| ||||||||||  || || |  |||| ||  | ||||||| ||||| |||    
T  25153836 acataatagacctgcaatcgaacggtcgaaaacatatcaaaaatattagatattaaaaaacacacggacaagaccaaaacggtaaacggaagaagattta 25153737  T
Q  169 tgagaccaaattgagacactttatagtta 197  Q
    || ||||||||||||||||||||||||||    
T  25153736 tgggaccaaattgagacactttatagtta 25153708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 126 - 198
Target Start/End: Complemental strand, 33458430 - 33458359
Alignment:
Q  126 aaactaacagagagaaccacaatagcaaacggatgaagacttatgagaccaaattgagacactttatagttaa 198  Q
    |||||||| ||||| |||||| ||| ||||||| ||||||||||| || | ||||||||||||||||||||||    
T  33458430 aaactaacggagaggaccacattagtaaacggaagaagacttatggga-ctaattgagacactttatagttaa 33458359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 146 - 197
Target Start/End: Complemental strand, 43935286 - 43935235
Alignment:
Q  146 aatagcaaacggatgaagacttatgagaccaaattgagacactttatagtta 197  Q
    ||||| ||||||  ||||| ||||||||||||||||||||||||||||||||    
T  43935286 aatagtaaacggcagaagatttatgagaccaaattgagacactttatagtta 43935235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 123 - 197
Target Start/End: Original strand, 43007641 - 43007715
Alignment:
Q  123 aaaaaactaacagagagaaccacaatagcaaacggatgaagacttatgagaccaaattgagacactttatagtta 197  Q
    |||| |||||| |||||||| | ||||| |||||    |||||||||| ||||||||||||||||||||||||||    
T  43007641 aaaatactaacggagagaactaaaatagtaaacgacataagacttatgggaccaaattgagacactttatagtta 43007715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 123 - 197
Target Start/End: Original strand, 43936132 - 43936206
Alignment:
Q  123 aaaaaactaacagagagaaccacaatagcaaacggatgaagacttatgagaccaaattgagacactttatagtta 197  Q
    ||||||||||| ||||| |||| ||||| |||||   ||||| ||||||||||||||| ||| ||||||||||||    
T  43936132 aaaaaactaacggagaggaccaaaatagtaaacgacagaagaattatgagaccaaattaagaaactttatagtta 43936206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 77 - 195
Target Start/End: Complemental strand, 45089641 - 45089523
Alignment:
Q  77 gacatgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaacagagagaaccacaatagcaaacggatgaagacttatgagacca 176  Q
    |||||| ||||||||| ||||||||| ||| |||| |||||| ||||||||| |||| || |  || ||  ||| ||||||| ||| | ||||| ||  |    
T  45089641 gacatgtaatcaaatgattaaaatcacatctaaaaatttagatattaaaaaattaacggatatgactacgttagtaaacggaggaaaatttatgggatta 45089542  T
Q  177 aattgagacactttatagt 195  Q
    |||||||||||||||||||    
T  45089541 aattgagacactttatagt 45089523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 123 - 197
Target Start/End: Complemental strand, 47163277 - 47163203
Alignment:
Q  123 aaaaaactaacagagagaaccacaatagcaaacggatgaagacttatgagaccaaattgagacactttatagtta 197  Q
    ||||||||||| ||||| |||| ||||| |||||||  |||| ||||| ||||||||| || |||||||||||||    
T  47163277 aaaaaactaacggagaggaccaaaatagtaaacggaaaaagatttatgggaccaaattaaggcactttatagtta 47163203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 75 - 144
Target Start/End: Original strand, 18670448 - 18670517
Alignment:
Q  75 tggacatgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaacagagagaacca 144  Q
    ||||| |||||||||| || || |||||||| |||||  ||| |||||||||||||||||||||| ||||    
T  18670448 tggacctgcaatcaaacggctataatcatattaaaaatattatacattaaaaaactaacagagaggacca 18670517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 124 - 197
Target Start/End: Original strand, 41516337 - 41516410
Alignment:
Q  124 aaaaactaacagagagaaccacaatagcaaacggatgaagacttatgagaccaaattgagacactttatagtta 197  Q
    ||||||||||||| |  |||||| ||  ||||||| ||| ||||||| ||||||||| ||||||||||||||||    
T  41516337 aaaaactaacagaaatgaccacattactaaacggaagaatacttatgggaccaaattaagacactttatagtta 41516410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 92 - 133
Target Start/End: Original strand, 44376646 - 44376687
Alignment:
Q  92 ggttaaaatcatatcaaaaactttagacattaaaaaactaac 133  Q
    ||||||||||| |||||||| |||||||||||||||||||||    
T  44376646 ggttaaaatcaaatcaaaaaatttagacattaaaaaactaac 44376687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 92 - 133
Target Start/End: Original strand, 44385513 - 44385554
Alignment:
Q  92 ggttaaaatcatatcaaaaactttagacattaaaaaactaac 133  Q
    ||||||||||| |||||||| |||||||||||||||||||||    
T  44385513 ggttaaaatcaaatcaaaaaatttagacattaaaaaactaac 44385554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 124 - 204
Target Start/End: Original strand, 131992 - 132072
Alignment:
Q  124 aaaaactaacagagagaaccacaatagcaaacggatgaagacttatgagaccaaattgagacactttatagttaagagacc 204  Q
    |||||||||| ||||  | |||| ||| ||||||| ||||||||||| |||||||| || |||||| ||||||||| ||||    
T  131992 aaaaactaacggagatgatcacattagtaaacggaggaagacttatgggaccaaatcgacacacttaatagttaagggacc 132072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 136 - 204
Target Start/End: Complemental strand, 19278464 - 19278396
Alignment:
Q  136 agagaaccacaatagcaaacggatgaagacttatgagaccaaattgagacactttatagttaagagacc 204  Q
    |||| |||| ||||| ||||||  ||||| ||||| |||||||||||||||||||||| ||||| ||||    
T  19278464 agaggaccaaaatagtaaacggcagaagaattatgggaccaaattgagacactttataattaagggacc 19278396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 122 - 197
Target Start/End: Complemental strand, 43006510 - 43006435
Alignment:
Q  122 taaaaaactaacagagagaaccacaatagcaaacggatgaagacttatgagaccaaattgagacactttatagtta 197  Q
    ||||| |||||| ||||  |||| ||||||||||||   |||||||| | |||||||||||||||||| |||||||    
T  43006510 taaaatactaacggagatgaccaaaatagcaaacggcataagacttaggggaccaaattgagacacttaatagtta 43006435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 160 - 199
Target Start/End: Complemental strand, 46457157 - 46457118
Alignment:
Q  160 gaagacttatgagaccaaattgagacactttatagttaag 199  Q
    ||||| ||||| ||||||||||||||||||||||||||||    
T  46457157 gaagatttatgggaccaaattgagacactttatagttaag 46457118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 161 - 199
Target Start/End: Original strand, 4168879 - 4168917
Alignment:
Q  161 aagacttatgagaccaaattgagacactttatagttaag 199  Q
    ||||||| |||||||||||||| ||||||||||||||||    
T  4168879 aagacttgtgagaccaaattgacacactttatagttaag 4168917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 74 - 144
Target Start/End: Complemental strand, 14108005 - 14107935
Alignment:
Q  74 atggacatgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaacagagagaacca 144  Q
    |||||| |||||||||| ||||| ||| |||| |||||  |||||||| ||||||||||| ||||| ||||    
T  14108005 atggacctgcaatcaaacggttataattatattaaaaatattagacatcaaaaaactaacggagaggacca 14107935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 71 - 197
Target Start/End: Complemental strand, 14206848 - 14206723
Alignment:
Q  71 ataatggacatgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaacagagagaaccacaatagcaaacggatgaagacttatg 170  Q
    ||||||||| ||||||| ||||||| |||| |||||| |||  ||| | |||||||||||||| ||||  | || ||||| |||||   ||||| ||||     
T  14206848 ataatggacctgcaatcgaatggttgaaattatatcagaaatgttaca-attaaaaaactaacggagatgagcaaaatagtaaacgacagaagatttata 14206750  T
Q  171 agaccaaattgagacactttatagtta 197  Q
     ||||||||||| ||| ||||||||||    
T  14206749 ggaccaaattgaaacattttatagtta 14206723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 71 - 197
Target Start/End: Complemental strand, 14215538 - 14215413
Alignment:
Q  71 ataatggacatgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaacagagagaaccacaatagcaaacggatgaagacttatg 170  Q
    ||||||||| ||||||| ||||||| |||| |||||| |||  ||| | |||||||||||||| ||||  | || ||||| |||||   ||||| ||||     
T  14215538 ataatggacctgcaatcgaatggttgaaattatatcagaaatgttaca-attaaaaaactaacggagatgagcaaaatagtaaacgacagaagatttata 14215440  T
Q  171 agaccaaattgagacactttatagtta 197  Q
     ||||||||||| ||| ||||||||||    
T  14215439 ggaccaaattgaaacattttatagtta 14215413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 74 - 144
Target Start/End: Complemental strand, 14417962 - 14417892
Alignment:
Q  74 atggacatgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaacagagagaacca 144  Q
    |||||| |||||||||| ||||| ||| |||| |||||  |||||||| ||||||||||| ||||| ||||    
T  14417962 atggacctgcaatcaaacggttataattatattaaaaatattagacatcaaaaaactaacggagaggacca 14417892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 166 - 204
Target Start/End: Original strand, 19848869 - 19848907
Alignment:
Q  166 ttatgagaccaaattgagacactttatagttaagagacc 204  Q
    ||||| |||||||||||||||||||||||||||| ||||    
T  19848869 ttatgggaccaaattgagacactttatagttaagggacc 19848907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 123 - 197
Target Start/End: Original strand, 22746312 - 22746386
Alignment:
Q  123 aaaaaactaacagagagaaccacaatagcaaacggatgaagacttatgagaccaaattgagacactttatagtta 197  Q
    |||| |||||| ||||| | || ||||| ||||||   |||| ||||| ||||||||||||||||||||||||||    
T  22746312 aaaatactaacggagaggatcaaaatagtaaacggcacaagatttatgggaccaaattgagacactttatagtta 22746386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 81 - 150
Target Start/End: Original strand, 43931816 - 43931885
Alignment:
Q  81 tgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaacagagagaaccacaatag 150  Q
    ||||||| |||| || ||||||| |||||||  |||||||||||||||||||| ||| | |||| |||||    
T  43931816 tgcaatcgaatgattcaaatcatttcaaaaatgttagacattaaaaaactaacggaggggaccaaaatag 43931885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 160 - 197
Target Start/End: Complemental strand, 45719702 - 45719665
Alignment:
Q  160 gaagacttatgagaccaaattgagacactttatagtta 197  Q
    ||||| ||||||||||||||| ||||||||||||||||    
T  45719702 gaagagttatgagaccaaatttagacactttatagtta 45719665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 130 - 199
Target Start/End: Original strand, 46674933 - 46675002
Alignment:
Q  130 taacagagagaaccacaatagcaaacggatgaagacttatgagaccaaattgagacactttatagttaag 199  Q
    |||| ||||| |||| ||||| ||||||   |||| ||||| |||||||| |||||||||||||||||||    
T  46674933 taacggagaggaccaaaatagtaaacggcaaaagatttatgggaccaaatcgagacactttatagttaag 46675002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 172 - 204
Target Start/End: Original strand, 38002555 - 38002587
Alignment:
Q  172 gaccaaattgagacactttatagttaagagacc 204  Q
    |||||||||||||||||||||||||||| ||||    
T  38002555 gaccaaattgagacactttatagttaagggacc 38002587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 90; Significance: 3e-43; HSPs: 51)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 10 - 197
Target Start/End: Complemental strand, 38223 - 38035
Alignment:
Q  10 aggagcagagagaagatgatgaaaagtgnnnnnnntttaggtgccaacggttc--tattaaacataatggacatgcaatcaaatggttaaaatcatatca 107  Q
    ||||| ||||||||||||||||||||||        ||||||||  |||||||  | ||||| | |||||||||||||| ||||||||||||||||||||    
T  38223 aggagaagagagaagatgatgaaaagtggaaaaaaattaggtgctgacggttcactgttaaatacaatggacatgcaattaaatggttaaaatcatatca 38124  T
Q  108 aaaactttagacattaaaaaactaacagagagaaccacaatagcaaacggatgaagacttatgagaccaaattgagacactttatagtta 197  Q
    |||| ||||||||||||||| ||||| ||||| |||||||||| ||||||| ||||||||||||||||||||| | ||||||||||||||    
T  38123 aaaaatttagacattaaaaa-ctaacggagaggaccacaatagtaaacggaggaagacttatgagaccaaattcaaacactttatagtta 38035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 73 - 199
Target Start/End: Original strand, 22621076 - 22621202
Alignment:
Q  73 aatggacatgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaacagagagaaccacaatagcaaacggatgaagacttatgag 172  Q
    |||||||||||||||||||| ||||||||||||||| || |||| |||||||||||||||||||||| |||||| ||  |||| || ||||||||||| |    
T  22621076 aatggacatgcaatcaaatgattaaaatcatatcaagaattttatacattaaaaaactaacagagaggaccacattaataaacagaggaagacttatggg 22621175  T
Q  173 accaaattgagacactttatagttaag 199  Q
    |||||||||  |||||| |||||||||    
T  22621176 accaaattgccacacttaatagttaag 22621202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 75 - 197
Target Start/End: Complemental strand, 37275059 - 37274937
Alignment:
Q  75 tggacatgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaacagagagaaccacaatagcaaacggatgaagacttatgagac 174  Q
    ||||||||||||| ||||||| ||||||||||| |||  ||| |||||||||||||||| ||||| |||| ||||| ||||||  ||||| ||||| ||     
T  37275059 tggacatgcaatcgaatggttgaaatcatatcagaaatgttatacattaaaaaactaacggagaggaccaaaatagtaaacggcagaagatttatgggaa 37274960  T
Q  175 caaattgagacactttatagtta 197  Q
    |||||||||||||||||||||||    
T  37274959 caaattgagacactttatagtta 37274937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 73 - 197
Target Start/End: Original strand, 39516439 - 39516563
Alignment:
Q  73 aatggacatgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaacagagagaaccacaatagcaaacggatgaagacttatgag 172  Q
    |||||||||||||||||||||||||||||| || ||||| ||||||||||||||||||||| ||||| | |||| ||| ||||||| ||| ||||||| |    
T  39516439 aatggacatgcaatcaaatggttaaaatcacatgaaaaaatttagacattaaaaaactaacggagaggatcacattagtaaacggaggaaaacttatggg 39516538  T
Q  173 accaaattgagacactttatagtta 197  Q
    || ||||| | || |||||| ||||    
T  39516539 actaaattaaaacgctttattgtta 39516563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 113 - 197
Target Start/End: Complemental strand, 24068464 - 24068380
Alignment:
Q  113 tttagacattaaaaaactaacagagagaaccacaatagcaaacggatgaagacttatgagaccaaattgagacactttatagtta 197  Q
    ||||||||||||||||||||| ||||| |||| | ||| ||||||| ||||||||||| ||||||||||||||||||||||||||    
T  24068464 tttagacattaaaaaactaacggagaggaccaaattagtaaacggaggaagacttatgggaccaaattgagacactttatagtta 24068380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 73 - 182
Target Start/End: Complemental strand, 7770171 - 7770062
Alignment:
Q  73 aatggacatgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaacagagagaaccacaatagcaaacggatgaagacttatgag 172  Q
    ||||||||| |||||||||||||||||||| || ||||| ||||||||||||||||||||| ||||| |||| | ||  ||||||| ||||||||||       
T  7770171 aatggacatacaatcaaatggttaaaatcacataaaaaaatttagacattaaaaaactaacggagaggaccatattaagaaacggaggaagacttataga 7770072  T
Q  173 accaaattga 182  Q
    ||||||||||    
T  7770071 accaaattga 7770062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 73 - 182
Target Start/End: Complemental strand, 7777848 - 7777739
Alignment:
Q  73 aatggacatgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaacagagagaaccacaatagcaaacggatgaagacttatgag 172  Q
    ||||||||| |||||||||||||||||||| || ||||| ||||||||||||||||||||| ||||| |||| | ||  ||||||| ||||||||||       
T  7777848 aatggacatacaatcaaatggttaaaatcacataaaaaaatttagacattaaaaaactaacggagaggaccatattaagaaacggaggaagacttataga 7777749  T
Q  173 accaaattga 182  Q
    ||||||||||    
T  7777748 accaaattga 7777739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 73 - 185
Target Start/End: Complemental strand, 7795941 - 7795828
Alignment:
Q  73 aatggacatgcaatcaaatggttaaaatcatatcaaaaac-tttagacattaaaaaactaacagagagaaccacaatagcaaacggatgaagacttatga 171  Q
    ||||||||| |||||||||||||||||||| || |||||  ||||||||||||||||||||| ||||| |||| | ||  ||||||| ||||||||| |     
T  7795941 aatggacatacaatcaaatggttaaaatcacataaaaaaaatttagacattaaaaaactaacggagaggaccatattaagaaacggaggaagacttacgg 7795842  T
Q  172 gaccaaattgagac 185  Q
     |||||||||||||    
T  7795841 aaccaaattgagac 7795828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 73 - 193
Target Start/End: Complemental strand, 7815218 - 7815097
Alignment:
Q  73 aatggacatgcaatcaaatggttaaaatcatatcaaaaac-tttagacattaaaaaactaacagagagaaccacaatagcaaacggatgaagacttatga 171  Q
    |||||||||  ||||||||||||||||||| || |||||  ||||||||||||||||||||| ||||| |||| | ||  ||||||| ||||||||||      
T  7815218 aatggacatagaatcaaatggttaaaatcacataaaaaaaatttagacattaaaaaactaacggagaggaccatattaagaaacggaggaagacttatag 7815119  T
Q  172 gaccaaattgagacactttata 193  Q
     |||||||||||||| ||||||    
T  7815118 aaccaaattgagacattttata 7815097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 73 - 197
Target Start/End: Original strand, 36939975 - 36940099
Alignment:
Q  73 aatggacatgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaacagagagaaccacaatagcaaacggatgaagacttatgag 172  Q
    ||||||| ||||||| ||||||| ||| ||||||||||   ||||| ||||||||| |||| ||||  |||| ||||| ||||||  ||||| ||||||     
T  36939975 aatggacctgcaatcgaatggttgaaaccatatcaaaattattagatattaaaaaattaacggagatgaccaaaatagtaaacggcagaagatttatgat 36940074  T
Q  173 accaaattgagacactttatagtta 197  Q
    |||||||||| ||||||||||||||    
T  36940075 accaaattgaaacactttatagtta 36940099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 73 - 137
Target Start/End: Complemental strand, 42793876 - 42793812
Alignment:
Q  73 aatggacatgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaacagag 137  Q
    ||||||||||||||| ||||||||||||||||||||||  |||||||||||||||| ||||||||    
T  42793876 aatggacatgcaatccaatggttaaaatcatatcaaaagttttagacattaaaaaattaacagag 42793812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 77 - 132
Target Start/End: Original strand, 36757166 - 36757221
Alignment:
Q  77 gacatgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaa 132  Q
    |||||||||| |||||||||||||||||||||||| ||||||||||||||||||||    
T  36757166 gacatgcaattaaatggttaaaatcatatcaaaaaatttagacattaaaaaactaa 36757221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 71 - 204
Target Start/End: Original strand, 19914846 - 19914979
Alignment:
Q  71 ataatggacatgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaacagagagaaccacaatagcaaacggatgaagacttatg 170  Q
    ||||||||| |||||||||||||| | ||| ||||||||||  ||||||||||| |||| ||| || |  |||| ||| | ||||||  ||||| |||||    
T  19914846 ataatggacctgcaatcaaatggtcacaataatatcaaaaatattagacattaataaacaaacggatatgaccaaaatggtaaacggtagaagatttatg 19914945  T
Q  171 agaccaaattgagacactttatagttaagagacc 204  Q
     |  ||||||||||||||||||||||||| ||||    
T  19914946 ggtacaaattgagacactttatagttaagggacc 19914979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 73 - 133
Target Start/End: Complemental strand, 24191554 - 24191494
Alignment:
Q  73 aatggacatgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaac 133  Q
    |||||||||||||||||| ||||||||||| |||||||| |||||||||||| ||||||||    
T  24191554 aatggacatgcaatcaaacggttaaaatcaaatcaaaaaatttagacattaacaaactaac 24191494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 73 - 133
Target Start/End: Original strand, 43203219 - 43203279
Alignment:
Q  73 aatggacatgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaac 133  Q
    |||||||||||||||||||| ||||||| | |||||||| |||||||||||||||||||||    
T  43203219 aatggacatgcaatcaaatgtttaaaattaaatcaaaaaatttagacattaaaaaactaac 43203279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 71 - 133
Target Start/End: Complemental strand, 9853746 - 9853684
Alignment:
Q  71 ataatggacatgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaac 133  Q
    |||||||| ||||||||||| ||||||||| |||||||||| |||||| ||||||||||||||    
T  9853746 ataatggatatgcaatcaaacggttaaaattatatcaaaaaatttagatattaaaaaactaac 9853684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 66 - 199
Target Start/End: Original strand, 35945372 - 35945505
Alignment:
Q  66 taaacataatggacatgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaacagagagaaccacaatagcaaacggatgaagac 165  Q
    |||| ||||||||| ||||||| ||||||| |||||| ||||||||  ||| |||||||||||||||   || | |||| ||||| |||| |  |||||     
T  35945372 taaatataatggacctgcaatcgaatggttgaaatcacatcaaaaatattaaacattaaaaaactaatccaggggaccaaaatagtaaactgcagaagat 35945471  T
Q  166 ttatgagaccaaattgagacactttatagttaag 199  Q
     |||| ||||||| ||||||| ||||||||||||    
T  35945472 atatgggaccaaagtgagacattttatagttaag 35945505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 77 - 185
Target Start/End: Complemental strand, 44102119 - 44102011
Alignment:
Q  77 gacatgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaacagagagaaccacaatagcaaacggatgaagacttatgagacca 176  Q
    ||||||||||| ||||||| | || |||| |||||  |||| ||||||||||||||||||||| |||| || ||  |||||| |||||| || |||||||    
T  44102119 gacatgcaatccaatggttgagattatataaaaaatattagtcattaaaaaactaacagagaggaccaaaagaggtaacggaagaagacataagagacca 44102020  T
Q  177 aattgagac 185  Q
    | |||||||    
T  44102019 atttgagac 44102011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 81 - 199
Target Start/End: Complemental strand, 16362585 - 16362467
Alignment:
Q  81 tgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaacagagagaaccacaatagcaaacggatgaagacttatgagaccaaatt 180  Q
    ||||||| || |||| |||||||||||||||  |||||||||||||||||||| ||||| |||| || |   |||||  |||||  || |||||||||||    
T  16362585 tgcaatcgaacggttgaaatcatatcaaaaatattagacattaaaaaactaacggagaggaccaaaagatgtaacggtggaagatataagagaccaaatt 16362486  T
Q  181 gagacactttatagttaag 199  Q
    || ||  ||||||||||||    
T  16362485 gaaacgttttatagttaag 16362467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 71 - 197
Target Start/End: Original strand, 29739583 - 29739709
Alignment:
Q  71 ataatggacatgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaacagagagaaccacaatagcaaacggatgaagacttatg 170  Q
    ||||||||| | ||||| || |||  ||| |||||||||||  ||| |||||||||||| ||| || |  |||| ||| | ||||||| ||| | |||||    
T  29739583 ataatggacctacaatcgaacggtcgaaaacatatcaaaaatattaaacattaaaaaacaaacggacatgaccaaaatggtaaacggaagaaaatttatg 29739682  T
Q  171 agaccaaattgagacactttatagtta 197  Q
     ||||||||||||||||||||||||||    
T  29739683 ggaccaaattgagacactttatagtta 29739709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 77 - 203
Target Start/End: Complemental strand, 39323957 - 39323831
Alignment:
Q  77 gacatgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaacagagagaaccacaatagcaaacggatgaagacttatgagacca 176  Q
    ||||||||||| |||||||||||| ||||||||||  |||||  || |||||||||| ||||| |||| || ||  |||||| |||||| || |||| ||    
T  39323957 gacatgcaatctaatggttaaaattatatcaaaaatattagatcttgaaaaactaacggagaggaccaaaagaggtaacggaagaagacataagagatca 39323858  T
Q  177 aattgagacactttatagttaagagac 203  Q
    | |||||||  ||| |||||| |||||    
T  39323857 atttgagacgttttttagttaggagac 39323831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 77 - 138
Target Start/End: Original strand, 13514811 - 13514872
Alignment:
Q  77 gacatgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaacagaga 138  Q
    ||||||||||| ||||||| |||| ||||||||||| |||| ||||||||||||||| ||||    
T  13514811 gacatgcaatcgaatggtttaaattatatcaaaaacattagtcattaaaaaactaacggaga 13514872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 77 - 138
Target Start/End: Original strand, 13604344 - 13604405
Alignment:
Q  77 gacatgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaacagaga 138  Q
    ||||||||||| ||||||| |||| ||||||||||| |||| ||||||||||||||| ||||    
T  13604344 gacatgcaatcgaatggtttaaattatatcaaaaacattagtcattaaaaaactaacggaga 13604405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 65 - 202
Target Start/End: Complemental strand, 34616316 - 34616174
Alignment:
Q  65 ttaaacataatggacatgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaacagagagaaccacaatagcaaacgg---atga 161  Q
    ||||| ||||| ||| ||||||| ||||||| ||||||||| |||||  ||| |||||||||||||||| || |  |||| ||| | |||||    | ||    
T  34616316 ttaaatataatagacctgcaatcgaatggttgaaatcatattaaaaatattaaacattaaaaaactaacggaaatgaccaaaatggtaaacgacaaaaga 34616217  T
Q  162 a--gacttatgagaccaaattgagacactttatagttaagaga 202  Q
    |  || ||||| |||||||||||||||||||||||||||||||    
T  34616216 aaagatttatgggaccaaattgagacactttatagttaagaga 34616174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 124 - 204
Target Start/End: Original strand, 13367043 - 13367123
Alignment:
Q  124 aaaaactaacagagagaaccacaatagcaaacggatgaagacttatgagaccaaattgagacactttatagttaagagacc 204  Q
    |||||||||| ||||| |||| ||||| ||||||  ||||| ||||| ||||||||| | |||||||||||||||| ||||    
T  13367043 aaaaactaacggagaggaccaaaatagtaaacggcagaagatttatgggaccaaattaaaacactttatagttaagggacc 13367123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 160 - 204
Target Start/End: Complemental strand, 29738378 - 29738334
Alignment:
Q  160 gaagacttatgagaccaaattgagacactttatagttaagagacc 204  Q
    ||||||||||||||| ||||||||||||||||||||||| |||||    
T  29738378 gaagacttatgagactaaattgagacactttatagttaatagacc 29738334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 124 - 199
Target Start/End: Original strand, 37276236 - 37276311
Alignment:
Q  124 aaaaactaacagagagaaccacaatagcaaacggatgaagacttatgagaccaaattgagacactttatagttaag 199  Q
    |||||||||||||||| ||||  |||  ||||||   |||| ||||| ||||||||||||||||||||||||||||    
T  37276236 aaaaactaacagagaggaccaatataataaacggcaaaagatttatgggaccaaattgagacactttatagttaag 37276311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 160 - 197
Target Start/End: Original strand, 7816117 - 7816154
Alignment:
Q  160 gaagacttatgagaccaaattgagacactttatagtta 197  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  7816117 gaagaattatgagaccaaattgagacactttatagtta 7816154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 160 - 200
Target Start/End: Complemental strand, 20308692 - 20308652
Alignment:
Q  160 gaagacttatgagaccaaattgagacactttatagttaaga 200  Q
    ||||| |||||||||||||||||||||||| ||||||||||    
T  20308692 gaagagttatgagaccaaattgagacacttaatagttaaga 20308652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 160 - 200
Target Start/End: Complemental strand, 21095325 - 21095285
Alignment:
Q  160 gaagacttatgagaccaaattgagacactttatagttaaga 200  Q
    ||||| |||||||||||||||||||||||| ||||||||||    
T  21095325 gaagagttatgagaccaaattgagacacttaatagttaaga 21095285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 77 - 125
Target Start/End: Complemental strand, 31844541 - 31844493
Alignment:
Q  77 gacatgcaatcaaatggttaaaatcatatcaaaaactttagacattaaa 125  Q
    ||||||||||||| |||||||||||| |||||||| |||||| ||||||    
T  31844541 gacatgcaatcaagtggttaaaatcaaatcaaaaattttagaaattaaa 31844493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 161 - 197
Target Start/End: Complemental strand, 37472489 - 37472453
Alignment:
Q  161 aagacttatgagaccaaattgagacactttatagtta 197  Q
    |||||||||| ||||||||||||||||||||||||||    
T  37472489 aagacttatgggaccaaattgagacactttatagtta 37472453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 73 - 133
Target Start/End: Original strand, 45395957 - 45396017
Alignment:
Q  73 aatggacatgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaac 133  Q
    |||||||||||||||||| |||||||||| ||| |||||  | ||||||||| ||||||||    
T  45395957 aatggacatgcaatcaaacggttaaaatcgtataaaaaatatcagacattaagaaactaac 45396017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 74 - 133
Target Start/End: Original strand, 118967 - 119026
Alignment:
Q  74 atggacatgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaac 133  Q
    |||||| |||||||||||| ||| |||||||| |||| | |||||||| |||||||||||    
T  118967 atggacctgcaatcaaatgattataatcatattaaaatcattagacatcaaaaaactaac 119026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 160 - 199
Target Start/End: Original strand, 24069475 - 24069514
Alignment:
Q  160 gaagacttatgagaccaaattgagacactttatagttaag 199  Q
    ||||| ||||| ||||||||||||||||||||||||||||    
T  24069475 gaagagttatgggaccaaattgagacactttatagttaag 24069514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 62 - 133
Target Start/End: Original strand, 24306053 - 24306124
Alignment:
Q  62 ctattaaacataatggacatgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaac 133  Q
    |||||||| | |||||| || |||| ||||||||||||| | |||||||  ||||| |||||||||||||||    
T  24306053 ctattaaatacaatggagatccaattaaatggttaaaattaaatcaaaatatttaggcattaaaaaactaac 24306124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 81 - 204
Target Start/End: Original strand, 37473986 - 37474109
Alignment:
Q  81 tgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaacagagagaaccacaatagcaaacggatgaagacttatgagaccaaatt 180  Q
    ||||||| |||||| ||||  ||||||||||  |||||||||||||||  ||| || || ||||  ||   ||||||| ||||| ||    |||||||||    
T  37473986 tgcaatcgaatggtcaaaacaatatcaaaaatattagacattaaaaaataaacggacaggaccaagatgataaacggaagaagatttccaggaccaaatt 37474085  T
Q  181 gagacactttatagttaagagacc 204  Q
    ||||||||||||||||||| ||||    
T  37474086 gagacactttatagttaagggacc 37474109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 135 - 197
Target Start/End: Original strand, 38591011 - 38591073
Alignment:
Q  135 gagagaaccacaatagcaaacggatgaagacttatgagaccaaattgagacactttatagtta 197  Q
    ||||| |||| ||||| ||||||   |||| ||||| ||||||||||||||||||||||||||    
T  38591011 gagaggaccaaaatagtaaacggcataagatttatgggaccaaattgagacactttatagtta 38591073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 161 - 195
Target Start/End: Complemental strand, 39515285 - 39515251
Alignment:
Q  161 aagacttatgagaccaaattgagacactttatagt 195  Q
    |||| ||||||||||||||||||||||||||||||    
T  39515285 aagagttatgagaccaaattgagacactttatagt 39515251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 171 - 204
Target Start/End: Original strand, 1570246 - 1570279
Alignment:
Q  171 agaccaaattgagacactttatagttaagagacc 204  Q
    ||||||||||||||||||||||||||| ||||||    
T  1570246 agaccaaattgagacactttatagttatgagacc 1570279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 160 - 193
Target Start/End: Original strand, 7796836 - 7796869
Alignment:
Q  160 gaagacttatgagaccaaattgagacactttata 193  Q
    ||||| ||||||||||||||||||||||||||||    
T  7796836 gaagagttatgagaccaaattgagacactttata 7796869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 73 - 138
Target Start/End: Original strand, 8397200 - 8397265
Alignment:
Q  73 aatggacatgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaacagaga 138  Q
    ||||||| ||||||||||||||| |||| ||||||||||  |||  ||||| ||||||||| ||||    
T  8397200 aatggacctgcaatcaaatggttgaaattatatcaaaaatattaatcattataaaactaacggaga 8397265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 160 - 197
Target Start/End: Complemental strand, 19913579 - 19913542
Alignment:
Q  160 gaagacttatgagaccaaattgagacactttatagtta 197  Q
    ||||||||||| ||||||||||| ||||||||||||||    
T  19913579 gaagacttatgggaccaaattgaaacactttatagtta 19913542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 128 - 197
Target Start/End: Complemental strand, 36070297 - 36070228
Alignment:
Q  128 actaacagagagaaccacaatagcaaacggatgaagacttatgagaccaaattgagacactttatagtta 197  Q
    |||||| | ||| |||| ||||| ||||||  ||||| ||||| || |||||||||||||||||||||||    
T  36070297 actaacggggaggaccaaaatagtaaacggcagaagatttatgggatcaaattgagacactttatagtta 36070228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 124 - 197
Target Start/End: Original strand, 37324681 - 37324754
Alignment:
Q  124 aaaaactaacagagagaaccacaatagcaaacggatgaagacttatgagaccaaattgagacactttatagtta 197  Q
    ||||| |||| ||||||| || ||||| ||| ||  ||||| || |||||||||||||||||| ||||||||||    
T  37324681 aaaaattaacggagagaaacaaaatagtaaatggtcgaagatttttgagaccaaattgagacattttatagtta 37324754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 73 - 126
Target Start/End: Complemental strand, 38697333 - 38697280
Alignment:
Q  73 aatggacatgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaa 126  Q
    |||||||||  |||| |||||||||| |||||||||||  ||||||||||||||    
T  38697333 aatggacatataatctaatggttaaattcatatcaaaagttttagacattaaaa 38697280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 73 - 150
Target Start/End: Original strand, 44607258 - 44607335
Alignment:
Q  73 aatggacatgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaacagagagaaccacaatag 150  Q
    ||||||| ||||||  || ||| | |||||||| |||||  |||||||||||||||||||| ||||| |||| |||||    
T  44607258 aatggacctgcaattcaacggtcataatcatattaaaaatattagacattaaaaaactaactgagaggaccaaaatag 44607335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 161 - 197
Target Start/End: Original strand, 7770927 - 7770963
Alignment:
Q  161 aagacttatgagaccaaattgagacactttatagtta 197  Q
    |||| ||||||||||||||||| ||||||||||||||    
T  7770927 aagagttatgagaccaaattgaaacactttatagtta 7770963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 135 - 203
Target Start/End: Original strand, 8096549 - 8096617
Alignment:
Q  135 gagagaaccacaatagcaaacggatgaagacttatgagaccaaattgagacactttatagttaagagac 203  Q
    ||||| |||| ||||| ||||||   |||| ||||||||||||||| |||| ||| |||||||||||||    
T  8096549 gagaggaccaaaatagtaaacggtaaaagagttatgagaccaaattaagacgcttaatagttaagagac 8096617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 124 - 204
Target Start/End: Complemental strand, 39220802 - 39220722
Alignment:
Q  124 aaaaactaacagagagaaccacaatagcaaacggatgaagacttatgagaccaaattgagacactttatagttaagagacc 204  Q
    ||||||||||||||| ||| | ||||| ||||||  ||||||||| |  | |||||||| |||||| |||||||| |||||    
T  39220802 aaaaactaacagagataacgaaaatagtaaacggcagaagacttaaggaatcaaattgaaacacttaatagttaatagacc 39220722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 89 - 149
Target Start/End: Original strand, 40251314 - 40251374
Alignment:
Q  89 aatggttaaaatcatatcaaaaactttagacattaaaaaactaacagagagaaccacaata 149  Q
    ||||||| |||||||||||||||  ||||||||||||||| |||  ||||| |||| ||||    
T  40251314 aatggttgaaatcatatcaaaaatattagacattaaaaaattaattgagaggaccaaaata 40251374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 85; Significance: 3e-40; HSPs: 43)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 73 - 197
Target Start/End: Complemental strand, 48253107 - 48252983
Alignment:
Q  73 aatggacatgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaacagagagaaccacaatagcaaacggatgaagacttatgag 172  Q
    |||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| ||||  || ||| ||| ||||||| ||||||||||| |    
T  48253107 aatggacatgcaatcaaatggttaaaatcacatcaaaaaatttagacattaaaaaactaacggagatgactacattagtaaacggaggaagacttatggg 48253008  T
Q  173 accaaattgagacactttatagtta 197  Q
    |||||||||||||||||||||||||    
T  48253007 accaaattgagacactttatagtta 48252983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 73 - 197
Target Start/End: Original strand, 47766893 - 47767017
Alignment:
Q  73 aatggacatgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaacagagagaaccacaatagcaaacggatgaagacttatgag 172  Q
    |||||||||||||||||||||||||||||| || ||||| |||||||||||||||||||||  |||| || ||| ||| ||||||| ||||||||||| |    
T  47766893 aatggacatgcaatcaaatggttaaaatcacataaaaaaatttagacattaaaaaactaacgcagaggacgacattagtaaacggaggaagacttatggg 47766992  T
Q  173 accaaattgagacactttatagtta 197  Q
    |||||||||||||||||||||||||    
T  47766993 accaaattgagacactttatagtta 47767017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 77 - 185
Target Start/End: Original strand, 53809439 - 53809547
Alignment:
Q  77 gacatgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaacagagagaaccacaatagcaaacggatgaagacttatgagacca 176  Q
    |||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| ||||  || ||| ||| ||||||| ||| ||||||||||| |    
T  53809439 gacatgcaatcaaatggttaaaattatatcaaaaaatttagacattaaaaaactaacggagatgacaacattagtaaacggaggaaaacttatgagacaa 53809538  T
Q  177 aattgagac 185  Q
    |||||||||    
T  53809539 aattgagac 53809547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 71 - 197
Target Start/End: Original strand, 32980392 - 32980518
Alignment:
Q  71 ataatggacatgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaacagagagaaccacaatagcaaacggatgaagacttatg 170  Q
    ||||||||| ||||||| ||||||| |||||||||||||||  ||||| |||||||||||||| ||||  |||| ||||| ||||||  ||||| ||||     
T  32980392 ataatggacctgcaatcgaatggttgaaatcatatcaaaaatgttagaaattaaaaaactaacggagatgaccaaaatagtaaacggcagaagatttata 32980491  T
Q  171 agaccaaattgagacactttatagtta 197  Q
     ||||||||||||||||||| ||||||    
T  32980492 ggaccaaattgagacactttgtagtta 32980518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 66 - 197
Target Start/End: Original strand, 8372551 - 8372682
Alignment:
Q  66 taaacataatggacatgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaacagagagaaccacaatagcaaacggatgaagac 165  Q
    |||| ||||||||| ||||||| ||||||| |||||||||||||||  ||| |||||||||||||||| |||   |||| ||||| |||| | ||  ||     
T  8372551 taaatataatggacctgcaatcgaatggttgaaatcatatcaaaaatattaaacattaaaaaactaacggaggtgaccaaaatagtaaactgttgtggat 8372650  T
Q  166 ttatgagaccaaattgagacactttatagtta 197  Q
    ||||| ||||||||||||||||||||||||||    
T  8372651 ttatgggaccaaattgagacactttatagtta 8372682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 73 - 137
Target Start/End: Original strand, 10301757 - 10301821
Alignment:
Q  73 aatggacatgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaacagag 137  Q
    ||||||||| |||||||||||||||||||| |||||||| |||||||||||||||||||||||||    
T  10301757 aatggacattcaatcaaatggttaaaatcaaatcaaaaaatttagacattaaaaaactaacagag 10301821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 65 - 204
Target Start/End: Complemental strand, 43345501 - 43345362
Alignment:
Q  65 ttaaacataatggacatgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaacagagagaaccacaatagcaaacggatgaaga 164  Q
    ||||| ||||| ||| ||||||| |||||||  ||||||||||||||  ||| |||||||||||||||| |||| ||||| ||| | |||||   |||||    
T  43345501 ttaaatataatagacctgcaatcgaatggttggaatcatatcaaaaatattaaacattaaaaaactaacggagaaaaccaaaatggtaaacgagagaaga 43345402  T
Q  165 cttatgagaccaaattgagacactttatagttaagagacc 204  Q
     ||||| ||||||||||| ||| |||||||||||| ||||    
T  43345401 tttatgggaccaaattgaaacattttatagttaagggacc 43345362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 73 - 133
Target Start/End: Original strand, 7271533 - 7271593
Alignment:
Q  73 aatggacatgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaac 133  Q
    |||||||||||||||||||||||||||| | |||||||| |||||||||||||||||||||    
T  7271533 aatggacatgcaatcaaatggttaaaattaaatcaaaaagtttagacattaaaaaactaac 7271593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 71 - 138
Target Start/End: Complemental strand, 14744242 - 14744175
Alignment:
Q  71 ataatggacatgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaacagaga 138  Q
    |||||||||||||||||||  |||||||||||||||||||| |||||||||||||||| |||| ||||    
T  14744242 ataatggacatgcaatcaatcggttaaaatcatatcaaaaaatttagacattaaaaaattaacggaga 14744175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 71 - 185
Target Start/End: Original strand, 25585773 - 25585887
Alignment:
Q  71 ataatggacatgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaacagagagaaccacaatagcaaacggatgaagacttatg 170  Q
    ||||||||  ||||||| ||||||| ||||||||||| |||  |||||||||||||||||||| ||||  || | ||||| |||||   ||||| |||||    
T  25585773 ataatggatctgcaatcgaatggttcaaatcatatcagaaatgttagacattaaaaaactaacggagatgactaaaatagtaaacgacagaagatttatg 25585872  T
Q  171 agaccaaattgagac 185  Q
    |||||||||||||||    
T  25585873 agaccaaattgagac 25585887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 73 - 133
Target Start/End: Original strand, 10339931 - 10339991
Alignment:
Q  73 aatggacatgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaac 133  Q
    ||||||||| ||||||||||||| |||||| |||||||| |||||||||||||||||||||    
T  10339931 aatggacattcaatcaaatggttcaaatcaaatcaaaaaatttagacattaaaaaactaac 10339991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 71 - 197
Target Start/End: Original strand, 11220598 - 11220724
Alignment:
Q  71 ataatggacatgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaacagagagaaccacaatagcaaacggatgaagacttatg 170  Q
    ||||||||| ||||||  ||||||| |||| |||||| |||  || ||||||||||||| ||| ||| | |||| ||||| |||||   ||||| ||||     
T  11220598 ataatggacctgcaatataatggttgaaattatatcataaatatttgacattaaaaaacaaacggaggggaccaaaatagtaaacgacagaagatttata 11220697  T
Q  171 agaccaaattgagacactttatagtta 197  Q
     ||||||||||||||||||||||||||    
T  11220698 ggaccaaattgagacactttatagtta 11220724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 71 - 133
Target Start/End: Original strand, 49380891 - 49380953
Alignment:
Q  71 ataatggacatgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaac 133  Q
    |||||||||||||||||||| || ||| ||||||||||||| |||| ||||||||||||||||    
T  49380891 ataatggacatgcaatcaaacggctaatatcatatcaaaaattttaaacattaaaaaactaac 49380953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 130 - 199
Target Start/End: Original strand, 47808105 - 47808174
Alignment:
Q  130 taacagagagaaccacaatagcaaacggatgaagacttatgagaccaaattgagacactttatagttaag 199  Q
    |||| ||||| |||| |||||||||||   ||||| ||||||||||||||||||||||||||||||||||    
T  47808105 taacggagaggaccaaaatagcaaacgacagaagatttatgagaccaaattgagacactttatagttaag 47808174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 77 - 197
Target Start/End: Complemental strand, 17345480 - 17345361
Alignment:
Q  77 gacatgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaacagagagaaccacaatagcaaacggatgaagacttatgagacca 176  Q
    ||||||||||| ||||||| ||||||||| |||||  |||||||||||||||||||| ||||| |||| || ||  ||| || ||||| ||| |  ||||    
T  17345480 gacatgcaatcgaatggttcaaatcatattaaaaatattagacattaaaaaactaacggagaggacca-aaaaggtaacagaagaagatttaaggaacca 17345382  T
Q  177 aattgagacactttatagtta 197  Q
    |||||||| ||||| ||||||    
T  17345381 aattgagatactttttagtta 17345361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 164 - 204
Target Start/End: Original strand, 49122035 - 49122075
Alignment:
Q  164 acttatgagaccaaattgagacactttatagttaagagacc 204  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  49122035 acttatgagaccaaattgagacactttatagttaagagacc 49122075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 71 - 133
Target Start/End: Original strand, 13621895 - 13621957
Alignment:
Q  71 ataatggacatgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaac 133  Q
    |||||||||||||||||||| || ||| ||||||||||||| |||| | ||||||||||||||    
T  13621895 ataatggacatgcaatcaaacggctaatatcatatcaaaaattttaaatattaaaaaactaac 13621957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 123 - 197
Target Start/End: Complemental strand, 29536838 - 29536764
Alignment:
Q  123 aaaaaactaacagagagaaccacaatagcaaacggatgaagacttatgagaccaaattgagacactttatagtta 197  Q
    ||||| ||||| ||||| |||| ||||| ||||| | ||||| ||||| ||||||||||||||||||||||||||    
T  29536838 aaaaagctaacggagaggaccaaaatagtaaacgaaagaagatttatgggaccaaattgagacactttatagtta 29536764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 75 - 133
Target Start/End: Original strand, 54750387 - 54750444
Alignment:
Q  75 tggacatgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaac 133  Q
    ||||||| |||||||||||||||||||| |||||||| |||||||||||||||| ||||    
T  54750387 tggacatacaatcaaatggttaaaatcaaatcaaaaa-tttagacattaaaaaattaac 54750444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 124 - 197
Target Start/End: Complemental strand, 11219553 - 11219480
Alignment:
Q  124 aaaaactaacagagagaaccacaatagcaaacggatgaagacttatgagaccaaattgagacactttatagtta 197  Q
    |||| ||||| ||||  |||| ||||| ||||||  ||||||| ||||||||||||||||||||||||||||||    
T  11219553 aaaatctaacggagatgaccaaaatagtaaacggcagaagactcatgagaccaaattgagacactttatagtta 11219480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 81 - 134
Target Start/End: Complemental strand, 20486174 - 20486121
Alignment:
Q  81 tgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaaca 134  Q
    |||||||||||| |||||||||||| ||||  ||||||||||||||||||||||    
T  20486174 tgcaatcaaatgattaaaatcatattaaaagttttagacattaaaaaactaaca 20486121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 124 - 197
Target Start/End: Original strand, 26798899 - 26798972
Alignment:
Q  124 aaaaactaacagagagaaccacaatagcaaacggatgaagacttatgagaccaaattgagacactttatagtta 197  Q
    |||||||||| ||||| |||| ||| | ||||||| ||||| ||||| ||||||||||||||| ||||||||||    
T  26798899 aaaaactaacggagaggaccaaaatggtaaacggaggaagaattatgggaccaaattgagacattttatagtta 26798972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 83 - 139
Target Start/End: Original strand, 7921595 - 7921651
Alignment:
Q  83 caatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaacagagag 139  Q
    ||||| ||||||| |||||||||||||||  |||||||||||||||||||| |||||    
T  7921595 caatcgaatggttgaaatcatatcaaaaatattagacattaaaaaactaacggagag 7921651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 81 - 132
Target Start/End: Original strand, 45422115 - 45422166
Alignment:
Q  81 tgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaa 132  Q
    ||||||||||||||||| |||||||||| ||  |||||||||||||||||||    
T  45422115 tgcaatcaaatggttaatatcatatcaagaatattagacattaaaaaactaa 45422166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 123 - 198
Target Start/End: Original strand, 47855330 - 47855405
Alignment:
Q  123 aaaaaactaacagagagaaccacaatagcaaacggatgaagacttatgagaccaaattgagacactttatagttaa 198  Q
    |||||| |||| ||||| |||| ||||| ||||||  ||||| ||||  |||||||||||||||||||||||||||    
T  47855330 aaaaaaataacggagaggaccaaaatagtaaacggcagaagatttataggaccaaattgagacactttatagttaa 47855405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 129 - 204
Target Start/End: Original strand, 54653964 - 54654039
Alignment:
Q  129 ctaacagagagaaccacaatagcaaacggatgaagacttatgagaccaaattgagacactttatagttaagagacc 204  Q
    ||||| ||||| |||| ||||| |||||   ||||| ||||| |||||||||||||||||||||||||||| ||||    
T  54653964 ctaacggagaggaccaaaatagtaaacgacagaagaattatgggaccaaattgagacactttatagttaagggacc 54654039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 71 - 193
Target Start/End: Original strand, 19252942 - 19253064
Alignment:
Q  71 ataatggacatgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaacagagagaaccacaatagcaaacggatgaagacttatg 170  Q
    ||||||||| |||||||||||||| ||||  |||| |||||  |||||||||||||||  ||| || || |||| ||| | ||||||  ||| | |||||    
T  19252942 ataatggacttgcaatcaaatggtcaaaacaatataaaaaatattagacattaaaaaataaacggacaggaccaaaatggtaaacggcagaatatttatg 19253041  T
Q  171 agaccaaattgagacactttata 193  Q
     || |||||||||||| ||||||    
T  19253042 ggatcaaattgagacattttata 19253064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 124 - 185
Target Start/End: Complemental strand, 25583237 - 25583176
Alignment:
Q  124 aaaaactaacagagagaaccacaatagcaaacggatgaagacttatgagaccaaattgagac 185  Q
    ||||| |||||||||| |||| ||||| ||||||  ||||||||||| ||||||||||||||    
T  25583237 aaaaattaacagagaggaccaaaatagtaaacggcagaagacttatgggaccaaattgagac 25583176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 123 - 196
Target Start/End: Complemental strand, 48866265 - 48866192
Alignment:
Q  123 aaaaaactaacagagagaaccacaatagcaaacggatgaagacttatgagaccaaattgagacactttatagtt 196  Q
    ||||||||||| ||||| |||| | ||| ||||||| ||||||||||  ||||||||||| |||||| ||||||    
T  48866265 aaaaaactaacggagaggaccatattagtaaacggaagaagacttataggaccaaattgacacacttaatagtt 48866192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 124 - 204
Target Start/End: Original strand, 48867423 - 48867503
Alignment:
Q  124 aaaaactaacagagagaaccacaatagcaaacggatgaagacttatgagaccaaattgagacactttatagttaagagacc 204  Q
    ||||||||||||| || |||||| ||| ||||| |  |||||| ||| ||||||||||| |||||| ||||||||| ||||    
T  48867423 aaaaactaacagaaaggaccacattagtaaacgtagaaagactaatgggaccaaattgacacacttaatagttaagggacc 48867503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 73 - 131
Target Start/End: Complemental strand, 5122487 - 5122429
Alignment:
Q  73 aatggacatgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaaacta 131  Q
    |||||||||| ||| |||  ||||||||||||| |||||  ||||||||||||||||||    
T  5122487 aatggacatgtaattaaacagttaaaatcatataaaaaatattagacattaaaaaacta 5122429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 73 - 139
Target Start/End: Complemental strand, 26797493 - 26797427
Alignment:
Q  73 aatggacatgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaacagagag 139  Q
    ||||||| ||||||||||||||| |||| ||||||||||  |||  ||||| ||||||||| |||||    
T  26797493 aatggacctgcaatcaaatggttgaaattatatcaaaaatattaatcattagaaaactaacggagag 26797427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 74 - 204
Target Start/End: Complemental strand, 38639191 - 38639061
Alignment:
Q  74 atggacatgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaacagagagaaccacaatagcaaacggatgaagacttatgaga 173  Q
    ||||||||  |||||||  |||| |||||| | |||||  ||||| || ||||||||||| | ||| |||| |||||  ||||   |||||| || ||||    
T  38639191 atggacattaaatcaaacagttataatcattttaaaaatattagatatcaaaaaactaactgcgaggaccaaaatagagaacgacggaagacataagaga 38639092  T
Q  174 ccaaattgagacactttatagttaagagacc 204  Q
    |||||| || |||||||||||||||| ||||    
T  38639091 ccaaatcgaaacactttatagttaagggacc 38639061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 124 - 197
Target Start/End: Complemental strand, 8371343 - 8371270
Alignment:
Q  124 aaaaactaacagagagaaccacaatagcaaacggatgaagacttatgagaccaaattgagacactttatagtta 197  Q
    |||||||||| ||||| |||| ||||| |||| |  ||||| |||||  |||||||||||||| ||||||||||    
T  8371343 aaaaactaacggagaggaccaaaatagtaaactgcagaagatttatggaaccaaattgagacattttatagtta 8371270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 166 - 203
Target Start/End: Complemental strand, 12060739 - 12060702
Alignment:
Q  166 ttatgagaccaaattgagacactttatagttaagagac 203  Q
    ||||||| |||||||||||||||| |||||||||||||    
T  12060739 ttatgaggccaaattgagacacttaatagttaagagac 12060702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 160 - 197
Target Start/End: Complemental strand, 19622092 - 19622055
Alignment:
Q  160 gaagacttatgagaccaaattgagacactttatagtta 197  Q
    ||||| ||||||||| ||||||||||||||||||||||    
T  19622092 gaagatttatgagactaaattgagacactttatagtta 19622055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 124 - 197
Target Start/End: Complemental strand, 39133140 - 39133067
Alignment:
Q  124 aaaaactaacagagagaaccacaatagcaaacggatgaagacttatgagaccaaattgagacactttatagtta 197  Q
    |||||||||||||||| |||| || ||  ||||   |||||| || | ||||||||||||||||||||||||||    
T  39133140 aaaaactaacagagaggaccaaaagaggtaacgagagaagacataagggaccaaattgagacactttatagtta 39133067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 160 - 197
Target Start/End: Original strand, 51401380 - 51401417
Alignment:
Q  160 gaagacttatgagaccaaattgagacactttatagtta 197  Q
    ||||| ||||| ||||||||||||||||||||||||||    
T  51401380 gaagatttatgggaccaaattgagacactttatagtta 51401417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 161 - 197
Target Start/End: Complemental strand, 7583556 - 7583520
Alignment:
Q  161 aagacttatgagaccaaattgagacactttatagtta 197  Q
    ||||| || ||||||||||||||||||||||||||||    
T  7583556 aagacataagagaccaaattgagacactttatagtta 7583520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 172 - 204
Target Start/End: Original strand, 19579335 - 19579367
Alignment:
Q  172 gaccaaattgagacactttatagttaagagacc 204  Q
    |||||||||||||||||||||||||||| ||||    
T  19579335 gaccaaattgagacactttatagttaagggacc 19579367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 124 - 204
Target Start/End: Complemental strand, 23559942 - 23559862
Alignment:
Q  124 aaaaactaacagagagaaccacaatagcaaacggatgaagacttatgagaccaaattgagacactttatagttaagagacc 204  Q
    |||||||||| ||||| |||| ||||| |||||   ||||| ||||| || ||||||||||||||| ||| ||||| ||||    
T  23559942 aaaaactaacggagaggaccaaaatagtaaacgacagaagaattatgggatcaaattgagacacttaataattaagggacc 23559862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 73 - 133
Target Start/End: Original strand, 40896687 - 40896747
Alignment:
Q  73 aatggacatgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaac 133  Q
    ||||||| | ||||||| |||||||||||| |||| |||  ||| ||||||||||||||||    
T  40896687 aatggacctacaatcaagtggttaaaatcacatcataaatattatacattaaaaaactaac 40896747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 160 - 204
Target Start/End: Original strand, 51825650 - 51825694
Alignment:
Q  160 gaagacttatgagaccaaattgagacactttatagttaagagacc 204  Q
    ||||| ||||| ||||||||||| |||||||||||||||| ||||    
T  51825650 gaagatttatgggaccaaattgaaacactttatagttaagggacc 51825694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 79; Significance: 1e-36; HSPs: 46)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 73 - 199
Target Start/End: Complemental strand, 24516508 - 24516382
Alignment:
Q  73 aatggacatgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaacagagagaaccacaatagcaaacggatgaagacttatgag 172  Q
    |||||||||||||||||||||||||||||||||||| || |||| |||||||||||||||||| | | |||||| ||  ||||||| |||||||||||||    
T  24516508 aatggacatgcaatcaaatggttaaaatcatatcaagaattttatacattaaaaaactaacaggggggaccacattaataaacggaggaagacttatgag 24516409  T
Q  173 accaaattgagacactttatagttaag 199  Q
    |||||||||| |||||| |||||||||    
T  24516408 accaaattgacacacttaatagttaag 24516382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 73 - 199
Target Start/End: Original strand, 40110594 - 40110720
Alignment:
Q  73 aatggacatgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaacagagagaaccacaatagcaaacggatgaagacttatgag 172  Q
    |||||||||||||||||||||||||||||||||||| || |||| |||||||||||||||||||||| |||||| ||  |||| || ||||||||||| |    
T  40110594 aatggacatgcaatcaaatggttaaaatcatatcaataattttatacattaaaaaactaacagagaggaccacattaataaacagaggaagacttatggg 40110693  T
Q  173 accaaattgagacactttatagttaag 199  Q
    |||||||||| |||||| |||||||||    
T  40110694 accaaattgacacacttaatagttaag 40110720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 73 - 202
Target Start/End: Original strand, 26803158 - 26803287
Alignment:
Q  73 aatggacatgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaacagagagaaccacaatagcaaacggatgaagacttatgag 172  Q
    |||||||||||||||||||||||||||||||||||| || |||| ||||||||| |||||||||||| | |||| |||||||| ||||| ||||||||      
T  26803158 aatggacatgcaatcaaatggttaaaatcatatcaagaattttatacattaaaatactaacagagaggatcacattagcaaacagatgacgacttatgga 26803257  T
Q  173 accaaattgagacactttatagttaagaga 202  Q
    | |||||||| |||||| ||||||||||||    
T  26803258 atcaaattgacacacttaatagttaagaga 26803287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 83 - 204
Target Start/End: Original strand, 50679773 - 50679894
Alignment:
Q  83 caatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaacagagagaaccacaatagcaaacggatgaagacttatgagaccaaattga 182  Q
    |||||||| |||| ||| ||||||||||| ||||||||||||||||||||| ||||| |||| | ||| ||||||| ||||||||||| |||||||||||    
T  50679773 caatcaaacggttgaaaacatatcaaaaaatttagacattaaaaaactaacggagaggaccatattagtaaacggaggaagacttatgggaccaaattga 50679872  T
Q  183 gacactttatagttaagagacc 204  Q
    ||||||||||||||||| ||||    
T  50679873 gacactttatagttaagggacc 50679894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 62 - 197
Target Start/End: Complemental strand, 49139986 - 49139851
Alignment:
Q  62 ctattaaacataatggacatgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaacagagagaaccacaatagcaaacggatga 161  Q
    |||||||| ||||||||| | |||||||||| || |||| ||||  ||||  ||| |||||||||||||||| ||||  |||| ||||| |||| |  ||    
T  49139986 ctattaaatataatggaccttcaatcaaatgattgaaataatatataaaatattaaacattaaaaaactaacggagattaccaaaatagtaaactgcgga 49139887  T
Q  162 agacttatgagaccaaattgagacactttatagtta 197  Q
    ||| ||||||||||||||||||||||||||||||||    
T  49139886 agatttatgagaccaaattgagacactttatagtta 49139851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 16 - 133
Target Start/End: Original strand, 40533484 - 40533603
Alignment:
Q  16 agagagaagatgatgaaaagtgnnnnnnntttaggtgccaacggttc--tattaaacataatggacatgcaatcaaatggttaaaatcatatcaaaaact 113  Q
    |||||||||||||||||||| |        ||||||||| |||||||  ||||||  | ||||||||||||||| ||||||||||||||||||||||  |    
T  40533484 agagagaagatgatgaaaagcgaaaataaattaggtgccgacggttcactattaattacaatggacatgcaatccaatggttaaaatcatatcaaaagtt 40533583  T
Q  114 ttagacattaaaaaactaac 133  Q
    ||||||||||||||| ||||    
T  40533584 ttagacattaaaaaattaac 40533603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 124 - 198
Target Start/End: Original strand, 19466198 - 19466272
Alignment:
Q  124 aaaaactaacagagagaaccacaatagcaaacggatgaagacttatgagaccaaattgagacactttatagttaa 198  Q
    |||||||||| |||||||||||||||| |||||   ||||| ||||| |||||||||||||||||||||||||||    
T  19466198 aaaaactaacggagagaaccacaatagtaaacgacagaagatttatgggaccaaattgagacactttatagttaa 19466272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 71 - 133
Target Start/End: Original strand, 51446780 - 51446842
Alignment:
Q  71 ataatggacatgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaac 133  Q
    ||||||||||||||||||||  ||||||||||||||||||| |||||| ||||||||||||||    
T  51446780 ataatggacatgcaatcaaacagttaaaatcatatcaaaaaatttagatattaaaaaactaac 51446842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 81 - 198
Target Start/End: Complemental strand, 33941483 - 33941366
Alignment:
Q  81 tgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaacagagagaaccacaatagcaaacggatgaagacttatgagaccaaatt 180  Q
    |||||||||| |||||||||||||| |||||  |||||||||||||||||||||||||| ||||     | ||||| ||| | ||||||  |||||||||    
T  33941483 tgcaatcaaacggttaaaatcatattaaaaatgttagacattaaaaaactaacagagaggaccatttgggtaaacgaatgtatacttataggaccaaatt 33941384  T
Q  181 gagacactttatagttaa 198  Q
    |||||| |||||| ||||    
T  33941383 gagacattttataattaa 33941366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 77 - 133
Target Start/End: Original strand, 12667218 - 12667274
Alignment:
Q  77 gacatgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaac 133  Q
    |||||||||||||||| ||||||||| |||||||| ||| |||||||||||||||||    
T  12667218 gacatgcaatcaaatgattaaaatcaaatcaaaaaatttcgacattaaaaaactaac 12667274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 124 - 204
Target Start/End: Complemental strand, 36509934 - 36509854
Alignment:
Q  124 aaaaactaacagagagaaccacaatagcaaacggatgaagacttatgagaccaaattgagacactttatagttaagagacc 204  Q
    |||||||||| |||||||||| ||||| ||||||  ||||| |||||  |||||||||| |||||||||||||||| ||||    
T  36509934 aaaaactaacggagagaaccaaaatagtaaacggcagaagatttatggaaccaaattgaaacactttatagttaagggacc 36509854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 129 - 204
Target Start/End: Original strand, 3979311 - 3979386
Alignment:
Q  129 ctaacagagagaaccacaatagcaaacggatgaagacttatgagaccaaattgagacactttatagttaagagacc 204  Q
    ||||| ||||| |||| ||||| ||||||  ||||| ||||| |||||||||||||||||||||||||||| ||||    
T  3979311 ctaacggagaggaccaaaatagtaaacggcagaagaattatgggaccaaattgagacactttatagttaagggacc 3979386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 73 - 204
Target Start/End: Complemental strand, 13929469 - 13929338
Alignment:
Q  73 aatggacatgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaacagagagaaccacaatagcaaacggatgaagacttatgag 172  Q
    ||||||| ||| ||| |||||| ||||  ||||||||||  |||||||||||||||  ||| || || ||||  ||   ||||||| ||||| ||| | |    
T  13929469 aatggacctgccatcgaatggtcaaaacaatatcaaaaatattagacattaaaaaataaacggacaggaccaagatgataaacggaagaagatttacggg 13929370  T
Q  173 accaaattgagacactttatagttaagagacc 204  Q
    ||||||||||||||||||||||||||| ||||    
T  13929369 accaaattgagacactttatagttaagggacc 13929338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 73 - 204
Target Start/End: Original strand, 36511273 - 36511404
Alignment:
Q  73 aatggacatgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaacagagagaaccacaatagcaaacggatgaagacttatgag 172  Q
    ||||| ||| ||||| ||||| | |||||||||   |||  ||| |||||| ||||||||| ||||  |||| ||||| |||||   ||||| ||||| |    
T  36511273 aatggtcattcaatctaatggctgaaatcatatttgaaatattatacattagaaaactaacggagatgaccaaaatagtaaacgacagaagatttatggg 36511372  T
Q  173 accaaattgagacactttatagttaagagacc 204  Q
    ||||||||||||||||||||||||||| ||||    
T  36511373 accaaattgagacactttatagttaagggacc 36511404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 124 - 199
Target Start/End: Complemental strand, 40109484 - 40109409
Alignment:
Q  124 aaaaactaacagagagaaccacaatagcaaacggatgaagacttatgagaccaaattgagacactttatagttaag 199  Q
    ||||||||||||| || |||||| ||| ||||||||||||| ||||| ||||||||||| |||||| | |||||||    
T  40109484 aaaaactaacagaaaggaccacattagtaaacggatgaagatttatgggaccaaattgacacacttaaaagttaag 40109409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 62 - 133
Target Start/End: Original strand, 48528824 - 48528896
Alignment:
Q  62 ctattaaacataatggacatgcaatcaaatggtt-aaaatcatatcaaaaactttagacattaaaaaactaac 133  Q
    |||||||| | ||||||||||||||| ||||||| ||||||| |||||||  |||||| ||||||||||||||    
T  48528824 ctattaaatacaatggacatgcaatctaatggtttaaaatcaaatcaaaagttttagatattaaaaaactaac 48528896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 124 - 199
Target Start/End: Original strand, 2973001 - 2973076
Alignment:
Q  124 aaaaactaacagagagaaccacaatagcaaacggatgaagacttatgagaccaaattgagacactttatagttaag 199  Q
    ||||||||||||| || |||||| ||| ||||||   |||||||||  |||||||||||||||||||||| |||||    
T  2973001 aaaaactaacagaaaggaccacactagtaaacggggtaagacttataggaccaaattgagacactttataattaag 2973076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 83 - 138
Target Start/End: Complemental strand, 14429918 - 14429863
Alignment:
Q  83 caatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaacagaga 138  Q
    |||||||| ||||||||||||||||| ||  ||||||||||||||| |||||||||    
T  14429918 caatcaaacggttaaaatcatatcaagaatattagacattaaaaaaataacagaga 14429863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 124 - 199
Target Start/End: Complemental strand, 22167902 - 22167827
Alignment:
Q  124 aaaaactaacagagagaaccacaatagcaaacggatgaagacttatgagaccaaattgagacactttatagttaag 199  Q
    ||||||||||||||||||||| ||||  ||||||  ||||| ||||| ||||||||||| |||||| ||| |||||    
T  22167902 aaaaactaacagagagaaccaaaataataaacggcagaagatttatgggaccaaattgaaacacttaatatttaag 22167827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 77 - 144
Target Start/End: Complemental strand, 51217788 - 51217721
Alignment:
Q  77 gacatgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaacagagagaacca 144  Q
    ||||||||||| ||||||| |||| ||||||||||  |||| ||||||||||||||| ||||| ||||    
T  51217788 gacatgcaatctaatggttgaaattatatcaaaaatattagtcattaaaaaactaacggagaggacca 51217721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 123 - 197
Target Start/End: Complemental strand, 13641381 - 13641307
Alignment:
Q  123 aaaaaactaacagagagaaccacaatagcaaacggatgaagacttatgagaccaaattgagacactttatagtta 197  Q
    |||||| |||| ||||  |||| ||||| ||||||  ||||| ||||| ||||||||||||||||||||||||||    
T  13641381 aaaaaaataacggagatgaccaaaatagtaaacggcagaagatttatgggaccaaattgagacactttatagtta 13641307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 71 - 133
Target Start/End: Original strand, 14479452 - 14479514
Alignment:
Q  71 ataatggacatgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaac 133  Q
    |||||||||||||||||||| || ||| || |||||||||| ||||  |||||||||||||||    
T  14479452 ataatggacatgcaatcaaacggctaatataatatcaaaaattttaatcattaaaaaactaac 14479514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 123 - 197
Target Start/End: Original strand, 25787156 - 25787230
Alignment:
Q  123 aaaaaactaacagagagaaccacaatagcaaacggatgaagacttatgagaccaaattgagacactttatagtta 197  Q
    |||| |||||| ||||| |||| ||||| ||| ||   |||| ||||||||||||||||||||||||||||||||    
T  25787156 aaaatactaacggagaggaccaaaatagtaaatggcataagatttatgagaccaaattgagacactttatagtta 25787230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 71 - 197
Target Start/End: Complemental strand, 26055073 - 26054947
Alignment:
Q  71 ataatggacatgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaacagagagaaccacaatagcaaacggatgaagacttatg 170  Q
    ||||| ||| ||||||| ||||||| |||| |||||| |||  || |||||||||||||||||  ||   |||| ||||| |||||   ||||| |||||    
T  26055073 ataatagacctgcaatctaatggttgaaattatatcataaatatttgacattaaaaaactaacgaaggagaccaaaatagtaaacgacagaagatttatg 26054974  T
Q  171 agaccaaattgagacactttatagtta 197  Q
      |||||||||| ||||||||||||||    
T  26054973 gaaccaaattgaaacactttatagtta 26054947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 75 - 133
Target Start/End: Original strand, 26287717 - 26287774
Alignment:
Q  75 tggacatgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaac 133  Q
    ||||||| |||||||||||||||||||| || ||||| |||||||||||||||| ||||    
T  26287717 tggacatacaatcaaatggttaaaatcaaat-aaaaaatttagacattaaaaaattaac 26287774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 71 - 133
Target Start/End: Original strand, 28051545 - 28051607
Alignment:
Q  71 ataatggacatgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaac 133  Q
    ||||||||||||||||||||  | ||| ||||||||||||| |||| ||||||||||| ||||    
T  28051545 ataatggacatgcaatcaaacagctaatatcatatcaaaaattttaaacattaaaaaattaac 28051607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 73 - 199
Target Start/End: Original strand, 34654282 - 34654408
Alignment:
Q  73 aatggacatgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaacagagagaaccacaatagcaaacggatgaagacttatgag 172  Q
    ||||||| ||||||| ||||||| ||||||||| |||||  |||| |||| ||||| |||| ||||| ||||  | ||  |||||  |||||| || |||    
T  34654282 aatggacctgcaatcgaatggttgaaatcatattaaaaatattagtcatttaaaaattaacggagaggaccaatagaggtaacggtagaagacataagag 34654381  T
Q  173 accaaattgagacactttatagttaag 199  Q
    |||||||||| ||  ||||||||||||    
T  34654382 accaaattgaaacgttttatagttaag 34654408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 123 - 197
Target Start/End: Original strand, 47136679 - 47136753
Alignment:
Q  123 aaaaaactaacagagagaaccacaatagcaaacggatgaagacttatgagaccaaattgagacactttatagtta 197  Q
    |||| |||||| ||||| |||| ||||| ||||||   |||| |||||| |||||||||||||||||||||||||    
T  47136679 aaaatactaacggagaggaccaaaatagtaaacggcataagatttatgacaccaaattgagacactttatagtta 47136753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 123 - 197
Target Start/End: Original strand, 47411440 - 47411514
Alignment:
Q  123 aaaaaactaacagagagaaccacaatagcaaacggatgaagacttatgagaccaaattgagacactttatagtta 197  Q
    |||| |||||| ||||||| || ||||| ||||||   |||| ||||| ||||||||||||||||||||||||||    
T  47411440 aaaatactaacggagagaatcaaaatagtaaacggcataagatttatgggaccaaattgagacactttatagtta 47411514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 160 - 197
Target Start/End: Original strand, 14071232 - 14071269
Alignment:
Q  160 gaagacttatgagaccaaattgagacactttatagtta 197  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  14071232 gaagacttatgggaccaaattgagacactttatagtta 14071269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 161 - 197
Target Start/End: Original strand, 13930705 - 13930741
Alignment:
Q  161 aagacttatgagaccaaattgagacactttatagtta 197  Q
    |||||||||| ||||||||||||||||||||||||||    
T  13930705 aagacttatgggaccaaattgagacactttatagtta 13930741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 88 - 136
Target Start/End: Original strand, 32459551 - 32459599
Alignment:
Q  88 aaatggttaaaatcatatcaaaaactttagacattaaaaaactaacaga 136  Q
    ||||||||||||| |||||| |||  |||||||||||||||||||||||    
T  32459551 aaatggttaaaataatatcataaatattagacattaaaaaactaacaga 32459599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 161 - 197
Target Start/End: Complemental strand, 47411070 - 47411034
Alignment:
Q  161 aagacttatgagaccaaattgagacactttatagtta 197  Q
    |||| ||||||||||||||||||||||||||||||||    
T  47411070 aagatttatgagaccaaattgagacactttatagtta 47411034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 124 - 199
Target Start/End: Complemental strand, 26802066 - 26801991
Alignment:
Q  124 aaaaactaacagagagaaccacaatagcaaacggatgaagacttatgagaccaaattgagacactttatagttaag 199  Q
    ||||| ||||||| || |||| | ||| ||||||| ||||||||||||||| ||||| | |||||| |||||||||    
T  26802066 aaaaagtaacagaaaggaccatattagtaaacggaggaagacttatgagactaaatttacacacttaatagttaag 26801991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 123 - 197
Target Start/End: Complemental strand, 2971823 - 2971749
Alignment:
Q  123 aaaaaactaacagagagaaccacaatagcaaacggatgaagacttatgagaccaaattgagacactttatagtta 197  Q
    |||||| ||||| |||| || ||| ||| |||| || ||| | ||||| ||||||||||||||||||||||||||    
T  2971823 aaaaaattaacaaagaggactacattagtaaacagaggaaaaattatgggaccaaattgagacactttatagtta 2971749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 75 - 133
Target Start/End: Complemental strand, 5611910 - 5611853
Alignment:
Q  75 tggacatgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaac 133  Q
    ||||||| |||||||||||||||||||| ||||| || |||||||||| ||||| ||||    
T  5611910 tggacatacaatcaaatggttaaaatcaaatcaagaa-tttagacattgaaaaattaac 5611853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 73 - 127
Target Start/End: Complemental strand, 6048094 - 6048040
Alignment:
Q  73 aatggacatgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaa 127  Q
    ||||||| | |||||||||||||| ||||| |||||||| ||||| |||||||||    
T  6048094 aatggacctccaatcaaatggttagaatcaaatcaaaaaatttaggcattaaaaa 6048040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 123 - 197
Target Start/End: Complemental strand, 25786092 - 25786018
Alignment:
Q  123 aaaaaactaacagagagaaccacaatagcaaacggatgaagacttatgagaccaaattgagacactttatagtta 197  Q
    |||| |||||||||||| |||| ||||  |||||    |||| ||||| ||||||||||||||||||||||||||    
T  25786092 aaaatactaacagagaggaccaaaataataaacgacataagatttatgggaccaaattgagacactttatagtta 25786018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 124 - 197
Target Start/End: Complemental strand, 21277117 - 21277044
Alignment:
Q  124 aaaaactaacagagagaaccacaatagcaaacggatgaagacttatgagaccaaattgagacactttatagtta 197  Q
    |||||||||  ||||| | || ||||| ||||||  ||||| ||||| ||||||||||||| ||||||||||||    
T  21277117 aaaaactaatggagaggatcaaaatagtaaacggcagaagatttatgggaccaaattgagatactttatagtta 21277044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 124 - 189
Target Start/End: Original strand, 24517607 - 24517672
Alignment:
Q  124 aaaaactaacagagagaaccacaatagcaaacggatgaagacttatgagaccaaattgagacactt 189  Q
    ||||||||||||| || |||||| ||| |||| || ||||| ||||| ||||||||||| ||||||    
T  24517607 aaaaactaacagaaaggaccacattagtaaacagaggaagatttatgggaccaaattgacacactt 24517672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 124 - 197
Target Start/End: Original strand, 26056140 - 26056213
Alignment:
Q  124 aaaaactaacagagagaaccacaatagcaaacggatgaagacttatgagaccaaattgagacactttatagtta 197  Q
    |||| ||||| ||||| |||| ||||| |||||    |||| ||||| ||||||||||||||||||||||||||    
T  26056140 aaaatctaacggagaggaccaaaatagtaaacgacaaaagatttatgggaccaaattgagacactttatagtta 26056213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 75 - 144
Target Start/End: Complemental strand, 29000011 - 28999942
Alignment:
Q  75 tggacatgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaacagagagaacca 144  Q
    ||||| |||||||||| || || |||||||| |||||  ||| ||||||||||||||| |||||| ||||    
T  29000011 tggacctgcaatcaaacggctataatcatattaaaaatattatacattaaaaaactaatagagaggacca 28999942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 130 - 198
Target Start/End: Complemental strand, 3978161 - 3978093
Alignment:
Q  130 taacagagagaaccacaatagcaaacggatgaagacttatgagaccaaattgagacactttatagttaa 198  Q
    |||| ||||| |||| ||||| |||||   ||||| ||||| || ||||||||||||||||||||||||    
T  3978161 taacggagaggaccaaaatagtaaacgacagaagaattatgggatcaaattgagacactttatagttaa 3978093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 152 - 204
Target Start/End: Complemental strand, 9633870 - 9633818
Alignment:
Q  152 aaacggatgaagacttatgagaccaaattgagacactttatagttaagagacc 204  Q
    |||||| |||||| ||||   ||||||||||||||||||||||||||| ||||    
T  9633870 aaacggttgaagatttatataaccaaattgagacactttatagttaagggacc 9633818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 172 - 204
Target Start/End: Complemental strand, 44979510 - 44979478
Alignment:
Q  172 gaccaaattgagacactttatagttaagagacc 204  Q
    |||||| ||||||||||||||||||||||||||    
T  44979510 gaccaatttgagacactttatagttaagagacc 44979478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 161 - 197
Target Start/End: Original strand, 52181335 - 52181371
Alignment:
Q  161 aagacttatgagaccaaattgagacactttatagtta 197  Q
    |||| ||||||||| ||||||||||||||||||||||    
T  52181335 aagatttatgagactaaattgagacactttatagtta 52181371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 58; Significance: 4e-24; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 72 - 197
Target Start/End: Complemental strand, 6707101 - 6706976
Alignment:
Q  72 taatggacatgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaacagagagaaccacaatagcaaacggatgaagacttatga 171  Q
    |||||||| ||||||| ||||||| |||| |||||| |||  || ||||||||||||||||| ||| | |||| ||||| ||||||| ||||| |||||     
T  6707101 taatggacctgcaatctaatggttgaaattatatcataaatatttgacattaaaaaactaacggaggggaccaaaatagtaaacggaagaagatttatgg 6707002  T
Q  172 gaccaaattgagacactttatagtta 197  Q
     |||||||||||||||||||||||||    
T  6707001 aaccaaattgagacactttatagtta 6706976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 74 - 204
Target Start/End: Complemental strand, 15850285 - 15850155
Alignment:
Q  74 atggacatgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaacagagagaaccacaatagcaaacggatgaagacttatgaga 173  Q
    |||||| |||||||||| |||| |||||| || |||||  ||||||||| ||| |||||||||||| |||  |||||  ||| || ||| ||  | | ||    
T  15850285 atggacttgcaatcaaacggttgaaatcaaataaaaaatattagacatttaaatactaacagagaggaccgaaataggtaacagaagaatacacaaggga 15850186  T
Q  174 ccaaattgagacactttatagttaagagacc 204  Q
    |||||||||||||||||||||||||||||||    
T  15850185 ccaaattgagacactttatagttaagagacc 15850155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 71 - 132
Target Start/End: Complemental strand, 4920006 - 4919945
Alignment:
Q  71 ataatggacatgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaa 132  Q
    |||||||||||||||||||| |||||||||||||||||||| ||||||  ||||||||||||    
T  4920006 ataatggacatgcaatcaaacggttaaaatcatatcaaaaaatttagatgttaaaaaactaa 4919945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 73 - 133
Target Start/End: Complemental strand, 1147926 - 1147866
Alignment:
Q  73 aatggacatgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaac 133  Q
    |||||||||||||||  |||||||||||||||||||||| |||||||||||||||| ||||    
T  1147926 aatggacatgcaatcggatggttaaaatcatatcaaaaagtttagacattaaaaaaataac 1147866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 77 - 204
Target Start/End: Complemental strand, 25569939 - 25569812
Alignment:
Q  77 gacatgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaacagagagaaccacaatagcaaacggatgaagacttatgagacca 176  Q
    ||||||||||||| |||||||||| ||||||| ||   || ||||||||||||||||| | | ||||| || |  ||||||| ||||||||||| |||||    
T  25569939 gacatgcaatcaagtggttaaaatgatatcaagaataatatacattaaaaaactaacataaaaaaccaaaacaataaacggaggaagacttatgtgacca 25569840  T
Q  177 aattgagacactttatagttaagagacc 204  Q
    |||||| |||  | ||||||||| ||||    
T  25569839 aattgacacaagtaatagttaagggacc 25569812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 74 - 132
Target Start/End: Complemental strand, 45699705 - 45699647
Alignment:
Q  74 atggacatgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaa 132  Q
    |||||||||||||||||  ||||||||||||||||||| |||||| |||||||||||||    
T  45699705 atggacatgcaatcaaacagttaaaatcatatcaaaaaatttagatattaaaaaactaa 45699647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 71 - 204
Target Start/End: Complemental strand, 11386800 - 11386667
Alignment:
Q  71 ataatggacatgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaacagagagaaccacaatagcaaacggatgaagacttatg 170  Q
    ||||||||| |||||||||||| | | ||| |||| |||||  ||| |||||||||||| |||||| | ||||| ||| | ||||||  ||||  |||||    
T  11386800 ataatggacctgcaatcaaatgatcacaataatattaaaaatattaaacattaaaaaacaaacagataaaaccaaaatggtaaacggtagaaggtttatg 11386701  T
Q  171 agaccaaattgagacactttatagttaagagacc 204  Q
     || |||||||| |||||||||||||||| ||||    
T  11386700 ggatcaaattgaaacactttatagttaagggacc 11386667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 73 - 133
Target Start/End: Complemental strand, 19397707 - 19397647
Alignment:
Q  73 aatggacatgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaac 133  Q
    ||||||||||||||| |||||||||||| |||||||||  |||||||||||||||| ||||    
T  19397707 aatggacatgcaatccaatggttaaaattatatcaaaagttttagacattaaaaaaataac 19397647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 65 - 188
Target Start/End: Original strand, 40174699 - 40174821
Alignment:
Q  65 ttaaacataatggacatgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaacagagagaaccacaatagcaaacggatgaaga 164  Q
    ||||| ||||||||| ||||||| ||||||| ||||||||| |||||  ||| |||||||||||||||| ||||  |||| ||||| ||||    |||||    
T  40174699 ttaaatataatggacctgcaatcgaatggttgaaatcatataaaaaatatta-acattaaaaaactaacggagatgaccaaaatagtaaacaacagaaga 40174797  T
Q  165 cttatgagaccaaattgagacact 188  Q
     ||||| ||||||||||| |||||    
T  40174798 tttatgggaccaaattgaaacact 40174821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 71 - 133
Target Start/End: Complemental strand, 28610201 - 28610139
Alignment:
Q  71 ataatggacatgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaac 133  Q
    |||||| ||||||||||||| || ||| ||||||||||||| |||| ||||||||||||||||    
T  28610201 ataatgaacatgcaatcaaacggctaatatcatatcaaaaattttaaacattaaaaaactaac 28610139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 124 - 197
Target Start/End: Complemental strand, 23177797 - 23177724
Alignment:
Q  124 aaaaactaacagagagaaccacaatagcaaacggatgaagacttatgagaccaaattgagacactttatagtta 197  Q
    |||||||||| ||||| |||| ||| | ||||||  ||||| ||||| ||||||||||||||||||||||||||    
T  23177797 aaaaactaacggagaggaccaaaatggtaaacggcagaagatttatgggaccaaattgagacactttatagtta 23177724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 124 - 197
Target Start/End: Complemental strand, 23589054 - 23588981
Alignment:
Q  124 aaaaactaacagagagaaccacaatagcaaacggatgaagacttatgagaccaaattgagacactttatagtta 197  Q
    |||||||||| ||||| |||| ||| | ||||||  ||||| ||||| ||||||||||||||||||||||||||    
T  23589054 aaaaactaacggagaggaccaaaatggtaaacggcagaagatttatgggaccaaattgagacactttatagtta 23588981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 160 - 200
Target Start/End: Complemental strand, 10367326 - 10367286
Alignment:
Q  160 gaagacttatgagaccaaattgagacactttatagttaaga 200  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  10367326 gaagacttatgagactaaattgagacactttatagttaaga 10367286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 160 - 204
Target Start/End: Original strand, 37869069 - 37869113
Alignment:
Q  160 gaagacttatgagaccaaattgagacactttatagttaagagacc 204  Q
    ||||||||||||||| |||||||||||||||||||||||| ||||    
T  37869069 gaagacttatgagactaaattgagacactttatagttaagggacc 37869113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 81 - 204
Target Start/End: Original strand, 3533576 - 3533699
Alignment:
Q  81 tgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaacagagagaaccacaatagcaaacggatgaagacttatgagaccaaatt 180  Q
    |||||||||| |||| |||||||||||||||  ||| ||||||||| |||||| || |  | |  ||||| |||||    |||| |||||||||||||||    
T  3533576 tgcaatcaaacggttgaaatcatatcaaaaaacttaaacattaaaatactaacggaaatgatcgaaatagtaaacgacaaaagatttatgagaccaaatt 3533675  T
Q  181 gagacactttatagttaagagacc 204  Q
    || |||||| ||||||||| ||||    
T  3533676 gacacacttaatagttaagggacc 3533699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 123 - 197
Target Start/End: Original strand, 2583538 - 2583612
Alignment:
Q  123 aaaaaactaacagagagaaccacaatagcaaacggatgaagacttatgagaccaaattgagacactttatagtta 197  Q
    |||| |||||||||||| ||||  |||| |||| |   |||| ||||||||||||||||||||||||||||||||    
T  2583538 aaaatactaacagagaggaccaagatagtaaacagtgtaagatttatgagaccaaattgagacactttatagtta 2583612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 73 - 139
Target Start/End: Original strand, 4830617 - 4830683
Alignment:
Q  73 aatggacatgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaacagagag 139  Q
    ||||||| | ||||| ||||||| |||||||||||||||  ||||||||| |||||||||| |||||    
T  4830617 aatggacctacaatcgaatggttgaaatcatatcaaaaatattagacattcaaaaactaacggagag 4830683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 71 - 197
Target Start/End: Original strand, 10368325 - 10368451
Alignment:
Q  71 ataatggacatgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaacagagagaaccacaatagcaaacggatgaagacttatg 170  Q
    ||||||||||||||||| || |||  ||| |||||||||||  ||| | |||||||||| ||| || |  |||| |||   ||||||| ||| | |||||    
T  10368325 ataatggacatgcaatcgaacggtcgaaaacatatcaaaaatattaaatattaaaaaacaaacggacatgaccaaaatgataaacggaagaaaatttatg 10368424  T
Q  171 agaccaaattgagacactttatagtta 197  Q
     || |||||||||||||||||||||||    
T  10368425 ggatcaaattgagacactttatagtta 10368451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 71 - 128
Target Start/End: Original strand, 2717718 - 2717775
Alignment:
Q  71 ataatggacatgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaaa 128  Q
    ||||||||| |||||||||||||||||||||| |||| |||  ||| |||||||||||    
T  2717718 ataatggacgtgcaatcaaatggttaaaatcagatcagaaatattaaacattaaaaaa 2717775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 66 - 127
Target Start/End: Original strand, 9473984 - 9474045
Alignment:
Q  66 taaacataatggacatgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaa 127  Q
    |||||| ||||||||||||||| ||| |||||||| ||||||||||  ||| ||||||||||    
T  9473984 taaacacaatggacatgcaatcgaatagttaaaattatatcaaaaatattaaacattaaaaa 9474045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 152 - 197
Target Start/End: Complemental strand, 35799607 - 35799562
Alignment:
Q  152 aaacggatgaagacttatgagaccaaattgagacactttatagtta 197  Q
    ||||||| ||| | ||||||||||||||||||||||||||||||||    
T  35799607 aaacggaagaaaagttatgagaccaaattgagacactttatagtta 35799562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 160 - 204
Target Start/End: Original strand, 12854133 - 12854177
Alignment:
Q  160 gaagacttatgagaccaaattgagacactttatagttaagagacc 204  Q
    ||||| ||||| |||||||||||||||||||||||||||| ||||    
T  12854133 gaagatttatgggaccaaattgagacactttatagttaagggacc 12854177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 76 - 132
Target Start/End: Complemental strand, 16289951 - 16289895
Alignment:
Q  76 ggacatgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaa 132  Q
    |||||||| ||||||||  |||||||| || ||||| ||||||||||||||||||||    
T  16289951 ggacatgcgatcaaatgagtaaaatcaaataaaaaattttagacattaaaaaactaa 16289895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 81 - 197
Target Start/End: Original strand, 23178832 - 23178948
Alignment:
Q  81 tgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaacagagagaaccacaatagcaaacggatgaagacttatgagaccaaatt 180  Q
    ||||||| ||||||| |||| |||||| |||  ||| |||||||||||||||| ||||  |||| ||||  |||||  |||||| ||||| |||||| ||    
T  23178832 tgcaatcgaatggttgaaattatatcagaaatgttacacattaaaaaactaacggagatgaccaaaataataaacgactgaagatttatgggaccaattt 23178931  T
Q  181 gagacactttatagtta 197  Q
     | ||| ||||||||||    
T  23178932 aaaacagtttatagtta 23178948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 81 - 197
Target Start/End: Original strand, 23590089 - 23590205
Alignment:
Q  81 tgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaacagagagaaccacaatagcaaacggatgaagacttatgagaccaaatt 180  Q
    ||||||| ||||||| |||| |||||| |||  ||| |||||||||||||||| ||||  |||| ||||  |||||  |||||| ||||| |||||| ||    
T  23590089 tgcaatcgaatggttgaaattatatcagaaatgttacacattaaaaaactaacggagatgaccaaaataataaacgactgaagatttatgggaccaattt 23590188  T
Q  181 gagacactttatagtta 197  Q
     | ||| ||||||||||    
T  23590189 aaaacagtttatagtta 23590205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 128 - 199
Target Start/End: Complemental strand, 4829584 - 4829513
Alignment:
Q  128 actaacagagagaaccacaatagcaaacggatgaagacttatgagaccaaattgagacactttatagttaag 199  Q
    |||||||||||| |||| ||||| |||||    |||| |||||||| |||||||||||| ||||||||||||    
T  4829584 actaacagagaggaccaaaatagtaaacgacataagatttatgagatcaaattgagacattttatagttaag 4829513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 160 - 199
Target Start/End: Complemental strand, 7037053 - 7037014
Alignment:
Q  160 gaagacttatgagaccaaattgagacactttatagttaag 199  Q
    ||||||||||| ||||||||||| ||||||||||||||||    
T  7037053 gaagacttatgggaccaaattgaaacactttatagttaag 7037014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 123 - 197
Target Start/End: Complemental strand, 2581927 - 2581853
Alignment:
Q  123 aaaaaactaacagagagaaccacaatagcaaacggatgaagacttatgagaccaaattgagacactttatagtta 197  Q
    |||| |||||| ||||| ||||  |||| ||||||   |||| ||||| ||||||||||||||||||||||||||    
T  2581927 aaaatactaacggagaggaccaagatagtaaacggcgtaagatttatgggaccaaattgagacactttatagtta 2581853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 166 - 204
Target Start/End: Original strand, 7038367 - 7038405
Alignment:
Q  166 ttatgagaccaaattgagacactttatagttaagagacc 204  Q
    ||||| |||||||||||||||||||||||||||| ||||    
T  7038367 ttatgggaccaaattgagacactttatagttaagggacc 7038405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 161 - 199
Target Start/End: Complemental strand, 7982398 - 7982360
Alignment:
Q  161 aagacttatgagaccaaattgagacactttatagttaag 199  Q
    ||||||| |||||||||||||| ||||||||||||||||    
T  7982398 aagacttgtgagaccaaattgacacactttatagttaag 7982360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 170 - 204
Target Start/End: Complemental strand, 10477419 - 10477385
Alignment:
Q  170 gagaccaaattgagacactttatagttaagagacc 204  Q
    |||||||||||||||||||||||| ||||||||||    
T  10477419 gagaccaaattgagacactttataattaagagacc 10477385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 160 - 197
Target Start/End: Complemental strand, 12852973 - 12852936
Alignment:
Q  160 gaagacttatgagaccaaattgagacactttatagtta 197  Q
    ||||| ||||| ||||||||||||||||||||||||||    
T  12852973 gaagatttatgggaccaaattgagacactttatagtta 12852936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 77 - 141
Target Start/End: Original strand, 4513699 - 4513763
Alignment:
Q  77 gacatgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaacagagagaa 141  Q
    ||||||||||||||||||| |||| ||||||||||  |||   | |||||||||||| |||||||    
T  4513699 gacatgcaatcaaatggttgaaattatatcaaaaatattatttaataaaaaactaacggagagaa 4513763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 161 - 197
Target Start/End: Original strand, 4630114 - 4630150
Alignment:
Q  161 aagacttatgagaccaaattgagacactttatagtta 197  Q
    ||||| || ||||||||||||||||||||||||||||    
T  4630114 aagacataagagaccaaattgagacactttatagtta 4630150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 93 - 197
Target Start/End: Original strand, 21012042 - 21012146
Alignment:
Q  93 gttaaaatcatatcaaaaactttagacattaaaaaactaacagagagaaccacaatagcaaacggatgaagacttatgagaccaaattgagacactttat 192  Q
    |||| |||||||| |||||  ||| ||||| |||||||||| ||||  |||| ||||| |||||   ||||| ||  | ||||||||||| |||||||||    
T  21012042 gttataatcatattaaaaatattatacattcaaaaactaacggagatgaccaaaatagtaaacgacggaagatttgagggaccaaattgaaacactttat 21012141  T
Q  193 agtta 197  Q
    |||||    
T  21012142 agtta 21012146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 54; Significance: 9e-22; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 81 - 198
Target Start/End: Complemental strand, 54757 - 54640
Alignment:
Q  81 tgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaacagagagaaccacaatagcaaacggatgaagacttatgagaccaaatt 180  Q
    |||||||||| ||||| |||||||| |||||  |||||||| ||||||||||| ||||| |||||| | | |||| || ||||| ||||| |||||||||    
T  54757 tgcaatcaaacggttataatcatattaaaaatattagacatcaaaaaactaacggagaggaccacattggtaaacagaggaagatttatgggaccaaatt 54658  T
Q  181 gagacactttatagttaa 198  Q
    ||||||||||||| ||||    
T  54657 gagacactttataattaa 54640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 78 - 193
Target Start/End: Complemental strand, 11875 - 11760
Alignment:
Q  78 acatgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaacagagagaaccacaatagcaaacggatgaagacttatgagaccaa 177  Q
    |||||||||| |||||||||||||| ||||||||  |||||||||||||||||||| ||||| |||| |||||  ||| |  |||||| || | ||||||    
T  11875 acatgcaatcgaatggttaaaatcacatcaaaaatattagacattaaaaaactaacggagaggaccaaaataggtaactggagaagacataagggaccaa 11776  T
Q  178 attgagacactttata 193  Q
    ||||| ||||||||||    
T  11775 attgaaacactttata 11760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 52; Significance: 1e-20; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 77 - 144
Target Start/End: Complemental strand, 18773824 - 18773757
Alignment:
Q  77 gacatgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaacagagagaacca 144  Q
    ||||||||||| |||||||||||||||||||||||| | |||||||||||||||||||||||| ||||    
T  18773824 gacatgcaatcgaatggttaaaatcatatcaaaaacatcagacattaaaaaactaacagagaggacca 18773757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 71 - 204
Target Start/End: Original strand, 31740212 - 31740345
Alignment:
Q  71 ataatggacatgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaacagagagaaccacaatagcaaacggatgaagacttatg 170  Q
    ||||||||| |||||||||||| | | ||| |||  |||||  |||||||||||||||| ||| || || |||| ||| | ||||||   |||| |||||    
T  31740212 ataatggacctgcaatcaaatgctcacaataatacaaaaaatattagacattaaaaaacaaacggataggaccaaaatggtaaacggcataagatttatg 31740311  T
Q  171 agaccaaattgagacactttatagttaagagacc 204  Q
     |||||||||||||||||||||||||||| ||||    
T  31740312 ggaccaaattgagacactttatagttaagggacc 31740345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 123 - 196
Target Start/End: Original strand, 16269609 - 16269682
Alignment:
Q  123 aaaaaactaacagagagaaccacaatagcaaacggatgaagacttatgagaccaaattgagacactttatagtt 196  Q
    ||||| ||||||||||| |||||| ||| |||| || ||||||||||||||||||||||| |||||| ||||||    
T  16269609 aaaaacctaacagagaggaccacattagtaaacagaggaagacttatgagaccaaattgacacacttaatagtt 16269682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 73 - 133
Target Start/End: Original strand, 18242249 - 18242309
Alignment:
Q  73 aatggacatgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaac 133  Q
    |||||||||||||||||||||||||||| | || ||||| || ||||||||||||||||||    
T  18242249 aatggacatgcaatcaaatggttaaaattaaattaaaaatttaagacattaaaaaactaac 18242309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 71 - 120
Target Start/End: Original strand, 11968404 - 11968453
Alignment:
Q  71 ataatggacatgcaatcaaatggttaaaatcatatcaaaaactttagaca 120  Q
    ||||| |||||||||||||||||||||||||| |||||||| ||||||||    
T  11968404 ataatagacatgcaatcaaatggttaaaatcaaatcaaaaattttagaca 11968453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 73 - 134
Target Start/End: Original strand, 30232845 - 30232906
Alignment:
Q  73 aatggacatgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaaca 134  Q
    |||||||||||||||  ||||||||||| |||| ||||| |||||||||||||||| |||||    
T  30232845 aatggacatgcaatcggatggttaaaattatataaaaaagtttagacattaaaaaaataaca 30232906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 73 - 133
Target Start/End: Original strand, 138145 - 138205
Alignment:
Q  73 aatggacatgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaac 133  Q
    |||||||||||||||  ||||||||||| | |||||||| |||||||||||||||| ||||    
T  138145 aatggacatgcaatcggatggttaaaattacatcaaaaagtttagacattaaaaaaataac 138205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 73 - 133
Target Start/End: Original strand, 146166 - 146226
Alignment:
Q  73 aatggacatgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaac 133  Q
    |||||||||||||||  ||||||||||| | |||||||| |||||||||||||||| ||||    
T  146166 aatggacatgcaatcggatggttaaaattacatcaaaaagtttagacattaaaaaaataac 146226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 84 - 204
Target Start/End: Complemental strand, 33807852 - 33807732
Alignment:
Q  84 aatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaacagagagaaccacaatagcaaacggatgaagacttatgagaccaaattgag 183  Q
    ||||||| ||||| |||||||| |||||  | ||||||||||||| |||| ||||| |||| ||  | ||||||  ||| | |||||  | |||||||||    
T  33807852 aatcaaacggttataatcatatgaaaaatatcagacattaaaaaattaacggagaggaccaaaacggtaaacggcagaaaatttatggcatcaaattgag 33807753  T
Q  184 acactttatagttaagagacc 204  Q
    |||||||||||||||| ||||    
T  33807752 acactttatagttaagggacc 33807732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 124 - 199
Target Start/End: Original strand, 27440168 - 27440243
Alignment:
Q  124 aaaaactaacagagagaaccacaatagcaaacggatgaagacttatgagaccaaattgagacactttatagttaag 199  Q
    ||||| |||| ||||| |||| ||||| ||||||| ||||| ||||| ||||||||||||||| |||| |||||||    
T  27440168 aaaaattaacggagaggaccaaaatagtaaacggaagaagatttatgggaccaaattgagacaatttaaagttaag 27440243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 123 - 197
Target Start/End: Original strand, 8412308 - 8412382
Alignment:
Q  123 aaaaaactaacagagagaaccacaatagcaaacggatgaagacttatgagaccaaattgagacactttatagtta 197  Q
    |||| |||||| ||||| |||| ||||| ||||||   |||| ||||| ||||||||||||||||||||||||||    
T  8412308 aaaatactaacggagaggaccaaaatagtaaacggcacaagatttatgggaccaaattgagacactttatagtta 8412382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 123 - 197
Target Start/End: Original strand, 22299895 - 22299969
Alignment:
Q  123 aaaaaactaacagagagaaccacaatagcaaacggatgaagacttatgagaccaaattgagacactttatagtta 197  Q
    |||||| |||| ||||  |||| ||||| ||||||  ||||| ||||| ||||||||||||||||||||||||||    
T  22299895 aaaaaaataacggagatgaccaaaatagtaaacggcagaagatttatgggaccaaattgagacactttatagtta 22299969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 73 - 138
Target Start/End: Complemental strand, 13279530 - 13279466
Alignment:
Q  73 aatggacatgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaacagaga 138  Q
    ||||||| | |||||||| |||| ||||||||| ||||| || |||||||||||||||||||||||    
T  13279530 aatggacctacaatcaaacggttgaaatcatataaaaaaatt-agacattaaaaaactaacagaga 13279466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 124 - 197
Target Start/End: Complemental strand, 31738486 - 31738413
Alignment:
Q  124 aaaaactaacagagagaaccacaatagcaaacggatgaagacttatgagaccaaattgagacactttatagtta 197  Q
    |||||||||| ||||| |||| ||| | |||| |  ||||||||||| ||||||||||| ||||||||||||||    
T  31738486 aaaaactaacggagaggaccaaaatggtaaaccgcagaagacttatgggaccaaattgaaacactttatagtta 31738413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 166 - 203
Target Start/End: Complemental strand, 33129362 - 33129325
Alignment:
Q  166 ttatgagaccaaattgagacactttatagttaagagac 203  Q
    |||| |||||||||||||||||||||||||||||||||    
T  33129362 ttataagaccaaattgagacactttatagttaagagac 33129325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 130 - 197
Target Start/End: Complemental strand, 8411203 - 8411136
Alignment:
Q  130 taacagagagaaccacaatagcaaacggatgaagacttatgagaccaaattgagacactttatagtta 197  Q
    |||| ||||| |||| ||||| ||||||   |||| |||| |||||||||||||||||||||||||||    
T  8411203 taacggagaggaccaaaatagtaaacggcataagatttataagaccaaattgagacactttatagtta 8411136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 81 - 204
Target Start/End: Complemental strand, 13800196 - 13800074
Alignment:
Q  81 tgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaacagagagaaccacaatagcaaacggatgaagacttatgagaccaaatt 180  Q
    ||||||||| |||||||||| ||||||| ||   || ||||||||||||||||| | | ||||| || || | |||||  |||| ||||| |||||||||    
T  13800196 tgcaatcaagtggttaaaatgatatcaagaataatatacattaaaaaactaaca-aaaaaaccaaaacagtatacggagaaagatttatgggaccaaatt 13800098  T
Q  181 gagacactttatagttaagagacc 204  Q
    || ||| || ||||||||| ||||    
T  13800097 gacacaattaatagttaagggacc 13800074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 160 - 202
Target Start/End: Original strand, 293669 - 293711
Alignment:
Q  160 gaagacttatgagaccaaattgagacactttatagttaagaga 202  Q
    ||||||||||||||||||||||| |||||||||| ||| ||||    
T  293669 gaagacttatgagaccaaattgaaacactttataattaggaga 293711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 160 - 197
Target Start/End: Original strand, 19368547 - 19368584
Alignment:
Q  160 gaagacttatgagaccaaattgagacactttatagtta 197  Q
    |||||| || ||||||||||||||||||||||||||||    
T  19368547 gaagacataagagaccaaattgagacactttatagtta 19368584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 160 - 193
Target Start/End: Original strand, 34084163 - 34084196
Alignment:
Q  160 gaagacttatgagaccaaattgagacactttata 193  Q
    ||||| ||||||||||||||||||||||||||||    
T  34084163 gaagatttatgagaccaaattgagacactttata 34084196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 51; Significance: 6e-20; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 73 - 199
Target Start/End: Original strand, 42288 - 42414
Alignment:
Q  73 aatggacatgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaacagagagaaccacaatagcaaacggatgaagacttatgag 172  Q
    ||||||| |||||||||| |||| ||||||||||||||| | || ||||||||| |||||||||||| |||| ||||| |||||   ||||| ||||| |    
T  42288 aatggacctgcaatcaaacggttgaaatcatatcaaaaaatataaacattaaaatactaacagagaggaccaaaatagtaaacgacagaagatttatggg 42387  T
Q  173 accaaattgagacactttatagttaag 199  Q
    | |||||||| |||| | |||||||||    
T  42388 atcaaattgatacacgtaatagttaag 42414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0687 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0687
Description:

Target: scaffold0687; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 73 - 193
Target Start/End: Original strand, 6505 - 6626
Alignment:
Q  73 aatggacatgcaatcaaatggttaaaatcatatcaaaaac-tttagacattaaaaaactaacagagagaaccacaatagcaaacggatgaagacttatga 171  Q
    |||||||||  ||||||||||||||||||| || |||||  ||||||||||||||||||||| ||||| |||| | ||  ||||||| ||||||||||      
T  6505 aatggacatagaatcaaatggttaaaatcacataaaaaaaatttagacattaaaaaactaacggagaggaccatattaagaaacggaggaagacttatag 6604  T
Q  172 gaccaaattgagacactttata 193  Q
     |||||||||||||| ||||||    
T  6605 aaccaaattgagacattttata 6626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 49; Significance: 9e-19; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 77 - 193
Target Start/End: Original strand, 24761 - 24877
Alignment:
Q  77 gacatgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaacagagagaaccacaatagcaaacggatgaagacttatgagacca 176  Q
    ||||||||||  |||||||||||||| || |||||  |||||||||||||||||||| ||||  |||| |||||  |||||| |||||| || | |||||    
T  24761 gacatgcaattgaatggttaaaatcacataaaaaatattagacattaaaaaactaacggagatgaccaaaataggtaacggaggaagacataagggacca 24860  T
Q  177 aattgagacactttata 193  Q
    |||||| ||||||||||    
T  24861 aattgaaacactttata 24877  T

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Target: scaffold0219 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 62 - 133
Target Start/End: Complemental strand, 7082 - 7011
Alignment:
Q  62 ctattaaacataatggacatgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaac 133  Q
    |||||||| |||||||||||||||||||| ||||||||| |||||||||| |||||| ||| ||||||||||    
T  7082 ctattaaatataatggacatgcaatcaaacggttaaaattatatcaaaaaatttagatattgaaaaactaac 7011  T

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Target: scaffold0290 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 2)
Name: scaffold0290
Description:

Target: scaffold0290; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 71 - 197
Target Start/End: Complemental strand, 8555 - 8429
Alignment:
Q  71 ataatggacatgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaacagagagaaccacaatagcaaacggatgaagacttatg 170  Q
    |||| |||| ||||||| ||||||| |||| |||||| |||  ||| |||||||||||||||| ||||  |||  ||||| ||| |  |||||| |||||    
T  8555 ataacggacctgcaatcgaatggttgaaattatatcagaaatgttacacattaaaaaactaacggagatgaccgaaatagtaaatgactgaagatttatg 8456  T
Q  171 agaccaaattgagacactttatagtta 197  Q
     |||||| |||||||| ||||||||||    
T  8455 ggaccaatttgagacagtttatagtta 8429  T

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Target: scaffold0290; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 124 - 197
Target Start/End: Original strand, 9471 - 9544
Alignment:
Q  124 aaaaactaacagagagaaccacaatagcaaacggatgaagacttatgagaccaaattgagacactttatagtta 197  Q
    |||||||||| ||||  |||| ||| | ||||||  ||||| ||||| ||| ||||||||||||||||||||||    
T  9471 aaaaactaacggagatgaccaaaatggtaaacggcagaagatttatgggactaaattgagacactttatagtta 9544  T

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Target: scaffold0051 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 97 - 197
Target Start/End: Complemental strand, 22277 - 22177
Alignment:
Q  97 aaatcatatcaaaaactttagacattaaaaaactaacagagagaaccacaatagcaaacggatgaagacttatgagaccaaattgagacactttatagtt 196  Q
    ||||||||||| |||  ||||||||||||||| |||| ||||  |||| ||||| |||||   ||||| ||||| || |||||||||||| |||||||||    
T  22277 aaatcatatcagaaatgttagacattaaaaaattaacggagatgaccaaaatagtaaacgacagaagatttatgtgaacaaattgagacattttatagtt 22178  T
Q  197 a 197  Q
    |    
T  22177 a 22177  T

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Target: scaffold0013 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 69 - 197
Target Start/End: Complemental strand, 96338 - 96210
Alignment:
Q  69 acataatggacatgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaacagagagaaccacaatagcaaacggatgaagactta 168  Q
    ||||||| ||| ||||||| ||||||  ||| |||||||||||  ||||| ||||||||||  || || |  |||| ||| | ||||||| ||||| |||    
T  96338 acataatagacctgcaatcgaatggtcgaaaacatatcaaaaatattagatattaaaaaacacacggacatgaccaaaatggtaaacggaagaagattta 96239  T
Q  169 tgagaccaaattgagacactttatagtta 197  Q
    |  || |||||||||||||||||||||||    
T  96238 tcggatcaaattgagacactttatagtta 96210  T

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Target: scaffold0003 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 124 - 199
Target Start/End: Complemental strand, 47193 - 47118
Alignment:
Q  124 aaaaactaacagagagaaccacaatagcaaacggatgaagacttatgagaccaaattgagacactttatagttaag 199  Q
    ||||| |||| ||||| |||| ||||| ||||||| ||||| ||||| ||||||||||||||| |||| |||||||    
T  47193 aaaaattaacggagaggaccaaaatagtaaacggaagaagatttatgggaccaaattgagacaatttaaagttaag 47118  T

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Target: scaffold2127 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold2127
Description:

Target: scaffold2127; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 123 - 197
Target Start/End: Original strand, 507 - 581
Alignment:
Q  123 aaaaaactaacagagagaaccacaatagcaaacggatgaagacttatgagaccaaattgagacactttatagtta 197  Q
    |||| |||||| ||||| |||| ||||| ||||||   |||| |||||| |||||||||||||||||||||||||    
T  507 aaaatactaacggagaggaccaaaatagtaaacggcataagatttatgacaccaaattgagacactttatagtta 581  T

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Target: scaffold0114 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 71 - 133
Target Start/End: Complemental strand, 38719 - 38657
Alignment:
Q  71 ataatggacatgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaac 133  Q
    |||||||||||||||||||| || ||| ||||||| ||||| ||||  |||||||||||||||    
T  38719 ataatggacatgcaatcaaacggctaatatcatataaaaaattttaatcattaaaaaactaac 38657  T

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Target: scaffold1974 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold1974
Description:

Target: scaffold1974; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 124 - 197
Target Start/End: Original strand, 621 - 694
Alignment:
Q  124 aaaaactaacagagagaaccacaatagcaaacggatgaagacttatgagaccaaattgagacactttatagtta 197  Q
    |||||||||| ||||  |||| ||| | ||||||  ||||| ||||| ||| ||||||||||||||||||||||    
T  621 aaaaactaacggagatgaccaaaatggtaaacggcagaagatttatgggactaaattgagacactttatagtta 694  T

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Target: scaffold1878 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold1878
Description:

Target: scaffold1878; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 124 - 197
Target Start/End: Complemental strand, 653 - 580
Alignment:
Q  124 aaaaactaacagagagaaccacaatagcaaacggatgaagacttatgagaccaaattgagacactttatagtta 197  Q
    |||||||||| ||||  |||| ||| | ||||||  ||||| ||||| ||| ||||||||||||||||||||||    
T  653 aaaaactaacggagatgaccaaaatggtaaacggcagaagatttatgggactaaattgagacactttatagtta 580  T

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Target: scaffold0045 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 74 - 150
Target Start/End: Complemental strand, 75918 - 75842
Alignment:
Q  74 atggacatgcaatcaaatggttaaaatcatatcaaaaactttagacattaaaaaactaacagagagaaccacaatag 150  Q
    |||||| |||||||||| |||||  ||||||| |||||  |||||||| ||||||||||| | ||| |||| |||||    
T  75918 atggacctgcaatcaaacggttattatcatattaaaaatattagacatcaaaaaactaactgcgaggaccaaaatag 75842  T

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