View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12631_low_7 (Length: 257)

Name: NF12631_low_7
Description: NF12631
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12631_low_7
NF12631_low_7
[»] chr7 (79 HSPs)
chr7 (16-241)||(12465200-12465425)
chr7 (16-241)||(12372161-12372386)
chr7 (16-241)||(8851099-8851324)
chr7 (16-241)||(12322870-12323095)
chr7 (16-235)||(13147418-13147637)
chr7 (16-241)||(32433529-32433754)
chr7 (16-241)||(11067355-11067580)
chr7 (16-241)||(16999320-16999548)
chr7 (16-220)||(12127124-12127328)
chr7 (16-182)||(20620173-20620339)
chr7 (16-235)||(46386038-46386253)
chr7 (16-186)||(20214034-20214204)
chr7 (16-181)||(14180398-14180563)
chr7 (16-181)||(20586239-20586404)
chr7 (16-177)||(10277215-10277375)
chr7 (16-181)||(24269947-24270112)
chr7 (57-241)||(47974760-47974944)
chr7 (129-240)||(43276685-43276796)
chr7 (77-241)||(12754553-12754716)
chr7 (119-220)||(44374833-44374934)
chr7 (119-220)||(44383698-44383799)
chr7 (129-240)||(19283056-19283167)
chr7 (135-240)||(18074588-18074693)
chr7 (129-241)||(19195611-19195725)
chr7 (151-241)||(58353-58443)
chr7 (151-241)||(14160796-14160886)
chr7 (21-187)||(33002053-33002211)
chr7 (59-181)||(15095637-15095759)
chr7 (59-181)||(48807325-48807448)
chr7 (69-181)||(14218895-14219008)
chr7 (69-181)||(35771441-35771554)
chr7 (129-241)||(32160140-32160252)
chr7 (59-181)||(8135238-8135359)
chr7 (52-182)||(25943041-25943171)
chr7 (59-181)||(15140143-15140265)
chr7 (69-181)||(4071759-4071872)
chr7 (81-181)||(16078281-16078382)
chr7 (59-181)||(13698638-13698761)
chr7 (60-181)||(15623950-15624070)
chr7 (133-241)||(8488034-8488142)
chr7 (129-194)||(4690650-4690715)
chr7 (111-184)||(13744655-13744728)
chr7 (133-241)||(8513693-8513801)
chr7 (59-139)||(13132363-13132443)
chr7 (129-220)||(38299748-38299841)
chr7 (100-181)||(10658851-10658932)
chr7 (61-181)||(12557853-12557973)
chr7 (77-181)||(15289052-15289157)
chr7 (166-236)||(16214511-16214581)
chr7 (151-240)||(15119248-15119337)
chr7 (59-181)||(11054642-11054765)
chr7 (151-220)||(13744469-13744540)
chr7 (80-186)||(36704566-36704673)
chr7 (163-220)||(14156353-14156410)
chr7 (129-181)||(29052182-29052234)
chr7 (61-141)||(41284963-41285043)
chr7 (129-194)||(43745656-43745721)
chr7 (111-220)||(13315041-13315152)
chr7 (129-181)||(16250222-16250274)
chr7 (129-181)||(16550005-16550057)
chr7 (129-181)||(16615605-16615657)
chr7 (129-181)||(18955330-18955382)
chr7 (151-220)||(25943289-25943360)
chr7 (73-181)||(36685146-36685253)
chr7 (151-220)||(37539470-37539541)
chr7 (16-59)||(25942358-25942401)
chr7 (88-181)||(30820151-30820243)
chr7 (129-181)||(3287744-3287796)
chr7 (151-220)||(8930725-8930795)
chr7 (109-180)||(14928290-14928362)
chr7 (109-180)||(15351756-15351828)
chr7 (129-181)||(18990847-18990899)
chr7 (129-181)||(20252182-20252234)
chr7 (80-180)||(32302177-32302278)
chr7 (80-180)||(14259346-14259445)
chr7 (129-181)||(708429-708481)
chr7 (129-181)||(15575649-15575701)
chr7 (129-181)||(18874665-18874717)
chr7 (129-181)||(47095452-47095504)
[»] chr6 (41 HSPs)
chr6 (16-241)||(7827859-7828084)
chr6 (16-241)||(19655171-19655396)
chr6 (16-241)||(23150227-23150452)
chr6 (16-241)||(18703451-18703680)
chr6 (16-241)||(18709386-18709615)
chr6 (16-240)||(27125419-27125642)
chr6 (16-181)||(15890712-15890877)
chr6 (31-181)||(27329981-27330131)
chr6 (31-181)||(27390721-27390871)
chr6 (81-180)||(24267801-24267900)
chr6 (20-181)||(19235015-19235175)
chr6 (129-241)||(20410452-20410564)
chr6 (163-241)||(17318106-17318184)
chr6 (57-178)||(18585733-18585854)
chr6 (63-181)||(18928614-18928733)
chr6 (21-181)||(28948466-28948627)
chr6 (20-181)||(30673402-30673556)
chr6 (20-181)||(19167853-19167998)
chr6 (63-182)||(19401028-19401147)
chr6 (151-241)||(31734729-31734819)
chr6 (106-182)||(27572121-27572198)
chr6 (77-181)||(31731904-31732009)
chr6 (129-220)||(19825447-19825538)
chr6 (120-181)||(15998880-15998941)
chr6 (78-181)||(24550168-24550271)
chr6 (161-220)||(25922033-25922092)
chr6 (129-181)||(12041620-12041672)
chr6 (59-181)||(23501601-23501724)
chr6 (151-208)||(23431420-23431477)
chr6 (151-220)||(10446239-10446310)
chr6 (129-220)||(13285748-13285841)
chr6 (129-181)||(15173453-15173505)
chr6 (137-177)||(29625191-29625231)
chr6 (26-91)||(18259262-18259328)
chr6 (80-180)||(19772667-19772767)
chr6 (129-194)||(21683062-21683127)
chr6 (129-186)||(23658089-23658146)
chr6 (129-181)||(15900654-15900706)
chr6 (163-220)||(34140415-34140474)
chr6 (163-220)||(34153031-34153090)
chr6 (129-220)||(29045271-29045363)
[»] chr4 (47 HSPs)
chr4 (16-241)||(25091540-25091765)
chr4 (16-241)||(53630414-53630639)
chr4 (16-241)||(10356376-10356601)
chr4 (16-241)||(42875684-42875909)
chr4 (16-241)||(19610211-19610436)
chr4 (16-241)||(16998412-16998637)
chr4 (11-203)||(11425825-11426017)
chr4 (16-181)||(15115109-15115274)
chr4 (20-181)||(37019561-37019722)
chr4 (16-177)||(6633541-6633701)
chr4 (16-177)||(46001535-46001695)
chr4 (129-241)||(12424230-12424342)
chr4 (129-241)||(10694185-10694297)
chr4 (129-241)||(10907951-10908063)
chr4 (129-241)||(25513851-25513963)
chr4 (129-241)||(9639010-9639122)
chr4 (61-181)||(9924085-9924206)
chr4 (151-241)||(19022366-19022456)
chr4 (151-241)||(40230328-40230418)
chr4 (64-181)||(14549695-14549812)
chr4 (68-181)||(19434559-19434672)
chr4 (59-181)||(9870444-9870568)
chr4 (63-181)||(11478653-11478772)
chr4 (100-181)||(15613061-15613142)
chr4 (78-181)||(21144-21248)
chr4 (129-220)||(33186903-33186994)
chr4 (28-94)||(26921708-26921774)
chr4 (151-241)||(44023547-44023633)
chr4 (100-181)||(51993532-51993613)
chr4 (129-194)||(2424374-2424439)
chr4 (129-182)||(35811375-35811428)
chr4 (151-220)||(10273405-10273476)
chr4 (125-181)||(14186955-14187010)
chr4 (129-181)||(15008963-15009015)
chr4 (82-181)||(21062593-21062693)
chr4 (151-208)||(33243267-33243324)
chr4 (129-181)||(16296938-16296990)
chr4 (129-181)||(40620532-40620584)
chr4 (151-220)||(55583218-55583289)
chr4 (151-220)||(13165154-13165225)
chr4 (161-196)||(26014316-26014351)
chr4 (26-91)||(27028642-27028708)
chr4 (131-181)||(32466194-32466244)
chr4 (59-92)||(9638939-9638972)
chr4 (144-181)||(14186067-14186104)
chr4 (129-194)||(26446207-26446272)
chr4 (129-181)||(14631135-14631187)
[»] chr1 (46 HSPs)
chr1 (16-241)||(19676598-19676823)
chr1 (16-238)||(21045992-21046214)
chr1 (16-241)||(20633571-20633799)
chr1 (16-208)||(16058287-16058478)
chr1 (16-181)||(42912936-42913101)
chr1 (21-181)||(51324396-51324556)
chr1 (57-181)||(24723351-24723475)
chr1 (129-241)||(28476674-28476786)
chr1 (151-241)||(41225394-41225484)
chr1 (151-241)||(41226647-41226737)
chr1 (77-181)||(13302849-13302954)
chr1 (20-181)||(21168825-21168985)
chr1 (129-241)||(12710867-12710979)
chr1 (59-238)||(22350646-22350820)
chr1 (57-181)||(7051922-7052046)
chr1 (151-239)||(20588660-20588748)
chr1 (151-239)||(20593198-20593286)
chr1 (59-181)||(7320594-7320716)
chr1 (78-181)||(42697732-42697836)
chr1 (32-181)||(4595853-4595995)
chr1 (111-220)||(8306588-8306697)
chr1 (100-181)||(21239049-21239130)
chr1 (129-181)||(51336479-51336531)
chr1 (57-182)||(44822020-44822145)
chr1 (129-181)||(12327743-12327795)
chr1 (111-184)||(45499374-45499446)
chr1 (129-181)||(29763632-29763684)
chr1 (78-181)||(45755468-45755572)
chr1 (129-181)||(46197745-46197797)
chr1 (129-220)||(17901754-17901846)
chr1 (129-181)||(50001476-50001528)
chr1 (129-220)||(6834176-6834268)
chr1 (129-182)||(22145665-22145718)
chr1 (151-220)||(45499564-45499634)
chr1 (80-141)||(11946391-11946453)
chr1 (129-220)||(35895099-35895192)
chr1 (59-92)||(8276079-8276112)
chr1 (129-186)||(38056667-38056724)
chr1 (59-92)||(38056762-38056795)
chr1 (133-181)||(635004-635052)
chr1 (76-123)||(14801337-14801384)
chr1 (76-123)||(14810211-14810258)
chr1 (113-185)||(16401897-16401967)
chr1 (145-181)||(24727383-24727419)
chr1 (151-212)||(34392790-34392853)
chr1 (129-181)||(50544872-50544924)
[»] scaffold0737 (2 HSPs)
scaffold0737 (16-241)||(4654-4879)
scaffold0737 (59-177)||(5821-5941)
[»] chr2 (46 HSPs)
chr2 (16-238)||(24780783-24781005)
chr2 (16-241)||(24436535-24436760)
chr2 (13-238)||(5031072-5031297)
chr2 (16-241)||(9975816-9976041)
chr2 (29-241)||(22251388-22251600)
chr2 (16-220)||(17307373-17307577)
chr2 (16-241)||(2523687-2523912)
chr2 (16-181)||(24516073-24516238)
chr2 (16-181)||(40912207-40912372)
chr2 (16-194)||(19201187-19201365)
chr2 (16-177)||(37270587-37270747)
chr2 (16-144)||(27484514-27484642)
chr2 (67-241)||(27852605-27852776)
chr2 (16-133)||(36841151-36841268)
chr2 (59-181)||(25142133-25142256)
chr2 (57-208)||(22501897-22502050)
chr2 (57-208)||(22509831-22509984)
chr2 (57-181)||(357809-357933)
chr2 (57-179)||(1383545-1383667)
chr2 (129-241)||(21369293-21369405)
chr2 (59-181)||(3539766-3539889)
chr2 (169-241)||(36841267-36841339)
chr2 (151-240)||(14179669-14179758)
chr2 (157-241)||(31521197-31521281)
chr2 (148-241)||(20916326-20916419)
chr2 (151-233)||(14183414-14183496)
chr2 (81-181)||(44072509-44072609)
chr2 (78-181)||(25046066-25046170)
chr2 (133-208)||(149474-149549)
chr2 (64-181)||(22259974-22260090)
chr2 (78-181)||(5986125-5986229)
chr2 (151-237)||(24718041-24718127)
chr2 (59-181)||(19358820-19358943)
chr2 (69-166)||(18390229-18390326)
chr2 (129-181)||(21080969-21081021)
chr2 (58-112)||(24884399-24884453)
chr2 (129-208)||(12626399-12626478)
chr2 (80-186)||(14694276-14694383)
chr2 (129-181)||(25184189-25184241)
chr2 (59-181)||(18388190-18388312)
chr2 (151-219)||(23801518-23801592)
chr2 (129-173)||(18357975-18358019)
chr2 (129-181)||(21315476-21315528)
chr2 (129-181)||(21335266-21335318)
chr2 (129-177)||(21915624-21915672)
chr2 (129-190)||(23610626-23610687)
[»] scaffold0064 (1 HSPs)
scaffold0064 (16-241)||(58633-58858)
[»] chr3 (66 HSPs)
chr3 (16-241)||(17044853-17045078)
chr3 (28-241)||(22306523-22306736)
chr3 (16-241)||(17047013-17047238)
chr3 (16-241)||(17693954-17694179)
chr3 (16-240)||(17538993-17539217)
chr3 (18-241)||(41172311-41172534)
chr3 (16-241)||(35354489-35354714)
chr3 (16-235)||(11259318-11259537)
chr3 (7-217)||(49900608-49900818)
chr3 (16-241)||(40812720-40812941)
chr3 (16-208)||(17518846-17519038)
chr3 (16-208)||(17533708-17533900)
chr3 (16-241)||(15931448-15931672)
chr3 (16-181)||(40807883-40808048)
chr3 (32-241)||(14508749-14508959)
chr3 (16-181)||(44274305-44274470)
chr3 (16-166)||(50348041-50348191)
chr3 (16-181)||(10563596-10563760)
chr3 (16-177)||(10311415-10311575)
chr3 (118-241)||(17541423-17541546)
chr3 (21-181)||(19568208-19568368)
chr3 (59-196)||(11563654-11563792)
chr3 (64-156)||(35064566-35064658)
chr3 (59-241)||(45530544-45530725)
chr3 (61-181)||(33565018-33565139)
chr3 (21-181)||(9510916-9511076)
chr3 (21-181)||(9518891-9519051)
chr3 (59-181)||(42323971-42324094)
chr3 (61-181)||(35960928-35961049)
chr3 (77-181)||(16050875-16050979)
chr3 (129-241)||(14152339-14152451)
chr3 (129-208)||(15566744-15566823)
chr3 (151-238)||(50350759-50350846)
chr3 (69-181)||(13185834-13185947)
chr3 (16-80)||(35064681-35064745)
chr3 (59-182)||(49968858-49968981)
chr3 (174-241)||(17325561-17325628)
chr3 (16-74)||(5200277-5200335)
chr3 (77-181)||(24177736-24177840)
chr3 (80-178)||(11885560-11885658)
chr3 (160-220)||(50347596-50347656)
chr3 (133-220)||(14641509-14641596)
chr3 (59-164)||(37038978-37039085)
chr3 (100-181)||(12509350-12509431)
chr3 (129-181)||(15446868-15446920)
chr3 (113-181)||(36528851-36528919)
chr3 (140-181)||(5200243-5200284)
chr3 (151-208)||(6159427-6159484)
chr3 (151-208)||(53646032-53646089)
chr3 (151-220)||(12917265-12917336)
chr3 (151-219)||(3527117-3527187)
chr3 (129-220)||(29907639-29907731)
chr3 (129-220)||(29948805-29948897)
chr3 (129-220)||(29997959-29998051)
chr3 (129-182)||(22652773-22652826)
chr3 (78-178)||(14250085-14250185)
chr3 (129-181)||(16979912-16979964)
chr3 (129-181)||(17208524-17208576)
chr3 (129-220)||(22841239-22841331)
chr3 (80-180)||(22758835-22758935)
chr3 (113-181)||(3263963-3264031)
chr3 (73-139)||(31223887-31223952)
chr3 (129-220)||(45803291-45803383)
chr3 (129-181)||(5215647-5215699)
chr3 (59-106)||(22146832-22146880)
chr3 (163-220)||(25202168-25202227)
[»] scaffold1283 (1 HSPs)
scaffold1283 (16-241)||(408-633)
[»] scaffold0001 (3 HSPs)
scaffold0001 (16-241)||(31881-32106)
scaffold0001 (16-241)||(37188-37413)
scaffold0001 (16-241)||(77574-77799)
[»] chr8 (60 HSPs)
chr8 (16-239)||(42817849-42818072)
chr8 (23-235)||(19140659-19140870)
chr8 (16-241)||(39935947-39936175)
chr8 (16-194)||(5761421-5761598)
chr8 (7-181)||(20083638-20083812)
chr8 (16-171)||(5082222-5082377)
chr8 (16-177)||(6573060-6573221)
chr8 (16-181)||(6101753-6101918)
chr8 (16-177)||(37292593-37292753)
chr8 (16-177)||(6202664-6202824)
chr8 (129-240)||(18761448-18761559)
chr8 (7-128)||(20178581-20178704)
chr8 (27-181)||(20397510-20397656)
chr8 (21-181)||(22532132-22532292)
chr8 (21-181)||(22536817-22536977)
chr8 (141-241)||(23943766-23943866)
chr8 (151-241)||(21579146-21579236)
chr8 (151-241)||(36306019-36306109)
chr8 (13-181)||(31722493-31722661)
chr8 (134-238)||(22258249-22258353)
chr8 (59-196)||(20022025-20022155)
chr8 (151-240)||(18834444-18834533)
chr8 (59-181)||(45469219-45469342)
chr8 (77-181)||(17906849-17906953)
chr8 (21-177)||(39694281-39694437)
chr8 (59-181)||(22317911-22318033)
chr8 (151-241)||(29762808-29762898)
chr8 (69-181)||(36727038-36727151)
chr8 (129-220)||(22208269-22208360)
chr8 (129-194)||(4380604-4380669)
chr8 (69-181)||(23899987-23900100)
chr8 (161-220)||(12037125-12037184)
chr8 (78-181)||(19700109-19700213)
chr8 (78-181)||(23948211-23948315)
chr8 (77-182)||(17218649-17218755)
chr8 (100-181)||(23419411-23419493)
chr8 (151-220)||(22345186-22345257)
chr8 (151-220)||(22356846-22356917)
chr8 (114-181)||(22583660-22583727)
chr8 (114-181)||(23889784-23889851)
chr8 (111-182)||(36305837-36305908)
chr8 (59-180)||(42265510-42265631)
chr8 (105-181)||(22254741-22254818)
chr8 (129-181)||(26454708-26454760)
chr8 (152-220)||(23884192-23884262)
chr8 (133-220)||(22610226-22610315)
chr8 (144-181)||(17158963-17159000)
chr8 (133-194)||(21514695-21514756)
chr8 (144-181)||(23479097-23479134)
chr8 (145-181)||(19880838-19880874)
chr8 (151-220)||(20879494-20879565)
chr8 (137-177)||(34758875-34758915)
chr8 (59-195)||(3273819-3273956)
chr8 (120-194)||(36732399-36732473)
chr8 (129-181)||(12577880-12577931)
chr8 (129-177)||(25657518-25657566)
chr8 (133-220)||(22483942-22484029)
chr8 (144-181)||(16198851-16198888)
chr8 (129-181)||(18816295-18816347)
chr8 (129-177)||(22483786-22483834)
[»] scaffold1633 (1 HSPs)
scaffold1633 (16-240)||(1092-1316)
[»] scaffold0077 (2 HSPs)
scaffold0077 (16-240)||(34226-34450)
scaffold0077 (100-181)||(5921-6002)
[»] scaffold0407 (1 HSPs)
scaffold0407 (16-241)||(11215-11439)
[»] scaffold0080 (2 HSPs)
scaffold0080 (16-236)||(21738-21958)
scaffold0080 (188-241)||(58827-58880)
[»] scaffold0111 (2 HSPs)
scaffold0111 (21-208)||(12506-12693)
scaffold0111 (16-178)||(5270-5432)
[»] scaffold0019 (2 HSPs)
scaffold0019 (77-241)||(24071-24235)
scaffold0019 (81-180)||(30023-30122)
[»] scaffold1941 (1 HSPs)
scaffold1941 (16-181)||(25-190)
[»] chr5 (34 HSPs)
chr5 (16-208)||(21300017-21300209)
chr5 (16-217)||(19921525-19921732)
chr5 (30-177)||(7484903-7485050)
chr5 (20-181)||(20566445-20566598)
chr5 (32-190)||(31622028-31622178)
chr5 (129-240)||(23199148-23199259)
chr5 (57-186)||(36508628-36508757)
chr5 (151-241)||(21398584-21398674)
chr5 (63-181)||(21617928-21618047)
chr5 (57-181)||(31456888-31457012)
chr5 (63-182)||(22111762-22111881)
chr5 (77-181)||(20469176-20469281)
chr5 (151-241)||(26762424-26762514)
chr5 (129-181)||(6551290-6551342)
chr5 (78-181)||(10954038-10954141)
chr5 (151-217)||(32607280-32607346)
chr5 (73-181)||(10774664-10774771)
chr5 (58-194)||(17876132-17876268)
chr5 (129-195)||(30616614-30616680)
chr5 (129-182)||(266038-266091)
chr5 (156-220)||(8503849-8503913)
chr5 (129-181)||(17011728-17011780)
chr5 (59-181)||(21405628-21405751)
chr5 (61-141)||(31251931-31252011)
chr5 (100-181)||(25249828-25249910)
chr5 (100-181)||(25313612-25313694)
chr5 (129-181)||(18744874-18744926)
chr5 (133-220)||(16063755-16063844)
chr5 (28-77)||(22111715-22111764)
chr5 (151-220)||(21504161-21504232)
chr5 (151-194)||(14025794-14025837)
chr5 (57-96)||(30138059-30138098)
chr5 (133-182)||(1627066-1627115)
chr5 (129-181)||(29448840-29448892)
[»] scaffold0036 (1 HSPs)
scaffold0036 (68-241)||(78125-78298)
[»] scaffold1766 (1 HSPs)
scaffold1766 (16-181)||(696-861)
[»] scaffold0241 (2 HSPs)
scaffold0241 (16-181)||(3069-3234)
scaffold0241 (16-123)||(2451-2558)
[»] scaffold0207 (1 HSPs)
scaffold0207 (16-181)||(13392-13557)
[»] scaffold0020 (3 HSPs)
scaffold0020 (16-181)||(168999-169164)
scaffold0020 (16-185)||(143498-143667)
scaffold0020 (151-241)||(174243-174333)
[»] scaffold0334 (1 HSPs)
scaffold0334 (16-181)||(405-570)
[»] scaffold0026 (1 HSPs)
scaffold0026 (16-181)||(146610-146775)
[»] scaffold0047 (1 HSPs)
scaffold0047 (20-241)||(78955-79161)
[»] scaffold0632 (1 HSPs)
scaffold0632 (16-181)||(1052-1217)
[»] scaffold0004 (7 HSPs)
scaffold0004 (16-194)||(328275-328455)
scaffold0004 (28-182)||(75691-75839)
scaffold0004 (26-182)||(72841-72989)
scaffold0004 (77-182)||(110121-110227)
scaffold0004 (111-220)||(73069-73180)
scaffold0004 (129-220)||(66032-66124)
scaffold0004 (155-220)||(75963-76030)
[»] scaffold0956 (1 HSPs)
scaffold0956 (98-240)||(2524-2666)
[»] scaffold0149 (2 HSPs)
scaffold0149 (42-181)||(29573-29711)
scaffold0149 (57-181)||(21539-21663)
[»] scaffold0285 (1 HSPs)
scaffold0285 (20-181)||(19652-19805)
[»] scaffold0113 (1 HSPs)
scaffold0113 (55-181)||(35418-35542)
[»] scaffold0213 (1 HSPs)
scaffold0213 (129-238)||(19207-19316)
[»] scaffold0431 (1 HSPs)
scaffold0431 (129-241)||(5633-5745)
[»] scaffold0037 (3 HSPs)
scaffold0037 (21-181)||(112966-113127)
scaffold0037 (63-182)||(81501-81620)
scaffold0037 (21-181)||(117807-117960)
[»] scaffold0112 (1 HSPs)
scaffold0112 (20-181)||(2787-2941)
[»] scaffold0162 (1 HSPs)
scaffold0162 (151-241)||(23832-23922)
[»] scaffold0230 (1 HSPs)
scaffold0230 (57-178)||(6688-6809)
[»] scaffold0628 (1 HSPs)
scaffold0628 (13-196)||(1043-1226)
[»] scaffold0083 (3 HSPs)
scaffold0083 (21-181)||(10755-10913)
scaffold0083 (106-181)||(5045-5120)
scaffold0083 (129-181)||(1937-1989)
[»] scaffold0174 (6 HSPs)
scaffold0174 (26-177)||(5167-5310)
scaffold0174 (26-177)||(11287-11430)
scaffold0174 (27-182)||(19605-19759)
scaffold0174 (129-220)||(5454-5545)
scaffold0174 (129-220)||(11616-11707)
scaffold0174 (151-220)||(19878-19947)
[»] scaffold0853 (1 HSPs)
scaffold0853 (129-240)||(2396-2506)
[»] scaffold0203 (1 HSPs)
scaffold0203 (129-208)||(17913-17992)
[»] scaffold0107 (1 HSPs)
scaffold0107 (161-240)||(13493-13572)
[»] scaffold0379 (2 HSPs)
scaffold0379 (151-241)||(10969-11059)
scaffold0379 (64-182)||(10741-10851)
[»] scaffold0156 (1 HSPs)
scaffold0156 (57-175)||(16532-16650)
[»] scaffold0802 (1 HSPs)
scaffold0802 (61-181)||(4709-4830)
[»] scaffold0100 (1 HSPs)
scaffold0100 (30-177)||(26638-26779)
[»] scaffold0032 (1 HSPs)
scaffold0032 (129-208)||(61821-61900)
[»] scaffold0008 (1 HSPs)
scaffold0008 (60-181)||(135504-135625)
[»] scaffold0175 (2 HSPs)
scaffold0175 (59-181)||(8571-8694)
scaffold0175 (26-138)||(18744-18856)
[»] scaffold0040 (1 HSPs)
scaffold0040 (57-181)||(106051-106175)
[»] scaffold0414 (1 HSPs)
scaffold0414 (151-241)||(11100-11190)
[»] scaffold0028 (1 HSPs)
scaffold0028 (59-180)||(3053-3174)
[»] scaffold0848 (1 HSPs)
scaffold0848 (59-182)||(2020-2143)
[»] scaffold0123 (1 HSPs)
scaffold0123 (59-181)||(7205-7329)
[»] scaffold0125 (1 HSPs)
scaffold0125 (161-240)||(28583-28662)
[»] scaffold0251 (1 HSPs)
scaffold0251 (64-181)||(20086-20202)
[»] scaffold0056 (2 HSPs)
scaffold0056 (69-181)||(67060-67173)
scaffold0056 (129-194)||(18275-18340)
[»] scaffold0075 (1 HSPs)
scaffold0075 (78-181)||(60843-60947)
[»] scaffold0010 (1 HSPs)
scaffold0010 (78-181)||(126305-126407)
[»] scaffold0371 (2 HSPs)
scaffold0371 (151-241)||(10386-10476)
scaffold0371 (156-241)||(3901-3986)
[»] scaffold0220 (3 HSPs)
scaffold0220 (80-181)||(19905-20006)
scaffold0220 (59-92)||(13878-13911)
scaffold0220 (129-186)||(13949-14006)
[»] scaffold1256 (2 HSPs)
scaffold1256 (129-194)||(2187-2252)
scaffold1256 (213-241)||(2141-2169)
[»] scaffold0074 (1 HSPs)
scaffold0074 (148-241)||(1957-2050)
[»] scaffold0256 (1 HSPs)
scaffold0256 (111-173)||(1855-1917)
[»] scaffold0516 (3 HSPs)
scaffold0516 (133-194)||(5292-5353)
scaffold0516 (213-241)||(5149-5177)
scaffold0516 (213-241)||(5246-5274)
[»] scaffold0328 (2 HSPs)
scaffold0328 (151-208)||(18613-18670)
scaffold0328 (59-92)||(18731-18764)
[»] scaffold0041 (1 HSPs)
scaffold0041 (127-176)||(5712-5761)
[»] scaffold0671 (1 HSPs)
scaffold0671 (78-181)||(4888-4992)
[»] scaffold0589 (1 HSPs)
scaffold0589 (78-181)||(4333-4437)
[»] scaffold0395 (1 HSPs)
scaffold0395 (161-241)||(11921-12001)
[»] scaffold0071 (1 HSPs)
scaffold0071 (129-181)||(15272-15324)
[»] scaffold0002 (1 HSPs)
scaffold0002 (78-181)||(398510-398614)
[»] scaffold0676 (1 HSPs)
scaffold0676 (129-208)||(2881-2960)
[»] scaffold0003 (1 HSPs)
scaffold0003 (78-177)||(96347-96446)
[»] scaffold0261 (1 HSPs)
scaffold0261 (28-94)||(6620-6686)
[»] scaffold0819 (1 HSPs)
scaffold0819 (73-181)||(5311-5418)
[»] scaffold0577 (1 HSPs)
scaffold0577 (73-181)||(9004-9111)
[»] scaffold0439 (1 HSPs)
scaffold0439 (58-137)||(12323-12403)
[»] scaffold0065 (1 HSPs)
scaffold0065 (78-181)||(52544-52648)
[»] scaffold0042 (1 HSPs)
scaffold0042 (82-181)||(29340-29440)
[»] scaffold0031 (1 HSPs)
scaffold0031 (151-220)||(127302-127373)
[»] scaffold0007 (2 HSPs)
scaffold0007 (54-181)||(158822-158949)
scaffold0007 (133-181)||(18701-18749)
[»] scaffold0859 (1 HSPs)
scaffold0859 (59-166)||(4612-4718)
[»] scaffold0878 (1 HSPs)
scaffold0878 (129-219)||(3383-3474)
[»] scaffold0180 (1 HSPs)
scaffold0180 (59-191)||(28319-28451)
[»] scaffold0515 (1 HSPs)
scaffold0515 (129-181)||(5029-5081)
[»] scaffold0436 (1 HSPs)
scaffold0436 (129-181)||(8960-9012)
[»] scaffold0306 (1 HSPs)
scaffold0306 (129-181)||(5029-5081)
[»] scaffold0151 (1 HSPs)
scaffold0151 (66-181)||(31046-31160)
[»] scaffold0138 (2 HSPs)
scaffold0138 (129-181)||(21097-21149)
scaffold0138 (129-181)||(34112-34164)
[»] scaffold0057 (1 HSPs)
scaffold0057 (129-181)||(69853-69905)
[»] scaffold0601 (1 HSPs)
scaffold0601 (144-182)||(195-233)
[»] scaffold0061 (2 HSPs)
scaffold0061 (129-220)||(14546-14638)
scaffold0061 (129-220)||(23604-23696)
[»] scaffold0017 (1 HSPs)
scaffold0017 (129-178)||(26727-26776)
[»] scaffold0369 (1 HSPs)
scaffold0369 (159-220)||(15576-15638)
[»] scaffold0034 (2 HSPs)
scaffold0034 (129-181)||(29216-29268)
scaffold0034 (80-180)||(120905-121005)
[»] scaffold0116 (1 HSPs)
scaffold0116 (59-181)||(35464-35586)
[»] scaffold0070 (1 HSPs)
scaffold0070 (169-208)||(11193-11232)
[»] scaffold0086 (1 HSPs)
scaffold0086 (133-220)||(35145-35234)
[»] scaffold0505 (1 HSPs)
scaffold0505 (151-192)||(4958-4999)
[»] scaffold0411 (1 HSPs)
scaffold0411 (93-181)||(13417-13505)
[»] scaffold0058 (1 HSPs)
scaffold0058 (144-177)||(6383-6416)
[»] scaffold0046 (1 HSPs)
scaffold0046 (144-181)||(21777-21814)
[»] scaffold0730 (1 HSPs)
scaffold0730 (111-216)||(6468-6575)
[»] scaffold0625 (1 HSPs)
scaffold0625 (129-181)||(5861-5913)
[»] scaffold0308 (1 HSPs)
scaffold0308 (59-131)||(13370-13442)
[»] scaffold0205 (1 HSPs)
scaffold0205 (82-180)||(30607-30705)
[»] scaffold0043 (2 HSPs)
scaffold0043 (80-182)||(27928-28030)
scaffold0043 (106-182)||(42811-42888)
[»] scaffold1128 (1 HSPs)
scaffold1128 (80-141)||(448-510)
[»] scaffold0148 (1 HSPs)
scaffold0148 (151-214)||(8866-8931)
[»] scaffold0555 (1 HSPs)
scaffold0555 (151-196)||(8731-8776)
[»] scaffold1186 (1 HSPs)
scaffold1186 (129-181)||(2020-2072)
[»] scaffold0594 (1 HSPs)
scaffold0594 (129-181)||(2247-2299)
[»] scaffold0462 (1 HSPs)
scaffold0462 (129-181)||(11223-11275)
[»] scaffold0104 (2 HSPs)
scaffold0104 (129-181)||(14957-15009)
scaffold0104 (129-181)||(16977-17029)
[»] scaffold0035 (2 HSPs)
scaffold0035 (163-220)||(39054-39113)
scaffold0035 (163-220)||(43746-43805)
[»] scaffold0005 (1 HSPs)
scaffold0005 (129-181)||(186196-186248)


Alignment Details
Target: chr7 (Bit Score: 226; Significance: 1e-124; HSPs: 79)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 16 - 241
Target Start/End: Complemental strand, 12465425 - 12465200
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12465425 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 12465326  T
Q  116 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagattgctcctc 215  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12465325 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagattgctcctc 12465226  T
Q  216 ttctcacaagattcttctcttctctg 241  Q
    ||||||||||||||||||||||||||    
T  12465225 ttctcacaagattcttctcttctctg 12465200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 16 - 241
Target Start/End: Original strand, 12372161 - 12372386
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||    
T  12372161 acatcaattctacacaaattcaacgaattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattcccataactacaacctgcaac 12372260  T
Q  116 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagattgctcctc 215  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12372261 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagattgctcctc 12372360  T
Q  216 ttctcacaagattcttctcttctctg 241  Q
    ||| ||||||||||||||||||||||    
T  12372361 ttcacacaagattcttctcttctctg 12372386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 16 - 241
Target Start/End: Complemental strand, 8851324 - 8851099
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||    
T  8851324 acatcaattctacacaaattcaacagattttatactctattaacaaccaattacaacttcaaaacctaatttccaaattctcataactacaacctacaac 8851225  T
Q  116 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagattgctcctc 215  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  8851224 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagattgctcatc 8851125  T
Q  216 ttctcacaagattcttctcttctctg 241  Q
    ||||||||||||||||||||||||||    
T  8851124 ttctcacaagattcttctcttctctg 8851099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 16 - 241
Target Start/End: Complemental strand, 12323095 - 12322870
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||    
T  12323095 acatcaattctacacaaattcaacggattttctattctattaacaaccaagtacaacttcaaaacctaattcccaaatttccataactacaacctacaac 12322996  T
Q  116 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagattgctcctc 215  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||     
T  12322995 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagttccacccttaccttaaattagatgatcggactctacaagattgctcctt 12322896  T
Q  216 ttctcacaagattcttctcttctctg 241  Q
    ||||||||||||||||||||||||||    
T  12322895 ttctcacaagattcttctcttctctg 12322870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 16 - 235
Target Start/End: Complemental strand, 13147637 - 13147418
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    |||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13147637 acatcacttctacacaaattcaacggattttctactttattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 13147538  T
Q  116 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagattgctcctc 215  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  13147537 atgctaaactcaatttcagaattatataacttagaattagagaaagttagtcccacccttaccttaatttagatgatcggactctacaagattgctcctc 13147438  T
Q  216 ttctcacaagattcttctct 235  Q
    ||||||||||||||||||||    
T  13147437 ttctcacaagattcttctct 13147418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 16 - 241
Target Start/End: Complemental strand, 32433754 - 32433529
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    |||||| |||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||    
T  32433754 acatcacttctacacaaattcaactaattttctactctattaacaaccaattacaacttcaaaacctaattcacaaattcacataactacaacctacaac 32433655  T
Q  116 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagattgctcctc 215  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  32433654 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtctcacccttaccttaaattagatgatcggactctacaagattgctcctc 32433555  T
Q  216 ttctcacaagattcttctcttctctg 241  Q
    ||||||||||||||||||||||||||    
T  32433554 ttctcacaagattcttctcttctctg 32433529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 16 - 241
Target Start/End: Original strand, 11067355 - 11067580
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    |||||| |||| ||||||||||||| |||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||    
T  11067355 acatcacttctccacaaattcaacgaattttctactctattaacaaccaattactacatcaaaacctaattcccaaattcccataactacaacctacaac 11067454  T
Q  116 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagattgctcctc 215  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||    
T  11067455 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtctcacccttaccttaaattagatgatcggactctataagattgctcctc 11067554  T
Q  216 ttctcacaagattcttctcttctctg 241  Q
    ||||||||| ||||||||||||||||    
T  11067555 ttctcacaatattcttctcttctctg 11067580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 16 - 241
Target Start/End: Original strand, 16999320 - 16999548
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaa-ttcccataactacaacctacaa 114  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||| || ||    
T  16999320 acatcaattctacacaaattcaacggattttctactctattaacaaccgattacaacttcaaaacctaattcccaaaattcccataactacaacatataa 16999419  T
Q  115 catgctaaactcaatttcagaattatacaactta--gaattagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagattgctc 212  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||    
T  16999420 catgctaaactcaatttcagaattatacaacttatagaattagagaaagttagtctcacccttaccttaaattagatgatcggactctacaagattactc 16999519  T
Q  213 ctcttctcacaagattcttctcttctctg 241  Q
    |||||||||||||||||||||||||||||    
T  16999520 ctcttctcacaagattcttctcttctctg 16999548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 16 - 220
Target Start/End: Complemental strand, 12127328 - 12127124
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    |||| |||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  12127328 acataaattctacacaaattcaacgaattttctactctcttaacaaccaattacaacttcaaaacctaattcccaaatttccataactaaaacctacaac 12127229  T
Q  116 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagattgctcctc 215  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||| ||||||||||||    
T  12127228 atgttaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttagattagatgatcggtctctacgagattgctcctc 12127129  T
Q  216 ttctc 220  Q
    |||||    
T  12127128 ttctc 12127124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 16 - 182
Target Start/End: Original strand, 20620173 - 20620339
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  20620173 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaatttccataactacaacctacaac 20620272  T
Q  116 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaa 182  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  20620273 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacacttaccttaa 20620339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 16 - 235
Target Start/End: Complemental strand, 46386253 - 46386038
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  46386253 acatcaattctacacaaattcaacggaatttctactctattaacaaccaattacaacttcaaaacctaattctcaaattcccataactacaacctacaac 46386154  T
Q  116 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagattgctcctc 215  Q
    ||  ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||| ||    |||||| || |||||||||||||| ||    
T  46386153 atattaaactcaatttcagaattatacaacttagaattagagaaagttagtcctacccttatcttagat----tgatcgaacactacaagattgctcatc 46386058  T
Q  216 ttctcacaagattcttctct 235  Q
    ||||||||||||| ||||||    
T  46386057 ttctcacaagattattctct 46386038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 16 - 186
Target Start/End: Original strand, 20214034 - 20214204
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  20214034 acatcaattgtacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacttaattcccaaattcccataactacaacctacaac 20214133  T
Q  116 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaatta 186  Q
    ||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||| ||||    
T  20214134 atgctaaactcaatttcagaattatacaactcagaatttgagaaagttagtcccacccttaccttagatta 20214204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 16 - 181
Target Start/End: Complemental strand, 14180563 - 14180398
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||     
T  14180563 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacataattcccaaattcccataactacaacctacaat 14180464  T
Q  116 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 181  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||    
T  14180463 atgctaaactcaatttcagaattatacaacttagaattagagaaaattagtcacacccttacctta 14180398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 16 - 181
Target Start/End: Original strand, 20586239 - 20586404
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| || || |||||||||||||||||||||||||    
T  20586239 acatcaattctacacaaattcaacggattttctactctattaacaaccaattgcaacttcaaaccctagtttcctaattcccataactacaacctacaac 20586338  T
Q  116 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 181  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20586339 atggtaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 20586404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 16 - 177
Target Start/End: Original strand, 10277215 - 10277375
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    |||||| |||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||    
T  10277215 acatcacttctac-caaattcaacgaattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattctcataactacaacctacaac 10277313  T
Q  116 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttac 177  Q
    |||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  10277314 atgctaaacttaatttcagaattatacaacgtagaattagagaaagttagtcccacccttac 10277375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 16 - 181
Target Start/End: Complemental strand, 24270112 - 24269947
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    ||||||||| ||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||| ||| || |   |||| | |||||    
T  24270112 acatcaattgtacacaaattcaatggattttctactctattaacaaccaattacgacttcaaaacctaattcccaacttcacaaattcacaaacaacaac 24270013  T
Q  116 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 181  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||    
T  24270012 atgctaaactcaatttcagaattatacaacttaaaattagagaaagttaatcccacccttacctta 24269947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 57 - 241
Target Start/End: Complemental strand, 47974944 - 47974760
Alignment:
Q  57 aacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacatgctaaactcaatttcagaattatacaacttagaattaga 156  Q
    ||||||||||||||||||| |||| ||||||||||||| ||| ||||||||||||| || || ||||  || ||||||||| ||||||||||||||||||    
T  47974944 aacaaccaattacaacttctaaacataattcccaaatttccaaaactacaacctaccacctgttaaatccagtttcagaatcatacaacttagaattaga 47974845  T
Q  157 gaaagttagtcccacccttaccttaaattagatgatcggactctacaagattgctcctcttctcacaagattcttctcttctctg 241  Q
    ||||||||||| |||||||||||||  |||   ||||| ||||||||| |||||||||||||||||||||||||| |||||||||    
T  47974844 gaaagttagtctcacccttaccttaggttaatcgatcgaactctacaatattgctcctcttctcacaagattcttttcttctctg 47974760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 129 - 240
Target Start/End: Complemental strand, 43276796 - 43276685
Alignment:
Q  129 tttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagattgctcctcttctcacaagatt 228  Q
    |||||||||||||||||  |  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43276796 tttcagaattatacaacccattattagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagattgctcctcttctcacaagatt 43276697  T
Q  229 cttctcttctct 240  Q
    ||||||||||||    
T  43276696 cttctcttctct 43276685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 77 - 241
Target Start/End: Complemental strand, 12754716 - 12754553
Alignment:
Q  77 aaacctaattcccaaattcccataactacaacctacaacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccaccctta 176  Q
    |||| ||||||||||||| |||| |||||||||||| || || ||||  || ||||||||| ||| ||||||||||||||||||||||||||||||||||    
T  12754716 aaacataattcccaaatttccattactacaacctaccacctgttaaatccagtttcagaatcatataacttagaattagagaaagttagtcccaccctta 12754617  T
Q  177 ccttaaattagatgatcggactctacaagattgctcctcttctcacaagattcttctcttctctg 241  Q
    |||||  |||   ||| | ||||||||||||||||||||||||||||||||||||||||||||||    
T  12754616 ccttaggttaatcgat-gaactctacaagattgctcctcttctcacaagattcttctcttctctg 12754553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 119 - 220
Target Start/End: Original strand, 44374833 - 44374934
Alignment:
Q  119 ctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagattgctcctcttc 218  Q
    |||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| ||||||||||||| |||||| |||||||||||||||    
T  44374833 ctaaactcaatttcagaattatacaacttagaattagagaaagttactctcacccttaccttagattagatgatcggtctctacgagattgctcctcttc 44374932  T
Q  219 tc 220  Q
    ||    
T  44374933 tc 44374934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 119 - 220
Target Start/End: Original strand, 44383698 - 44383799
Alignment:
Q  119 ctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagattgctcctcttc 218  Q
    |||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| ||||||||||||| |||||| |||||||||||||||    
T  44383698 ctaaactcaatttcagaattatacaacttagaattagagaaagttactctcacccttaccttagattagatgatcggtctctacgagattgctcctcttc 44383797  T
Q  219 tc 220  Q
    ||    
T  44383798 tc 44383799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 129 - 240
Target Start/End: Original strand, 19283056 - 19283167
Alignment:
Q  129 tttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagattgctcctcttctcacaagatt 228  Q
    |||||||||||||||||  |   |||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||    
T  19283056 tttcagaattatacaacccattcttagagaaagttagtctcacccttaccttaaattagatgatcggactctacaagattactccttttctcacaagatt 19283155  T
Q  229 cttctcttctct 240  Q
    ||||||||||||    
T  19283156 cttctcttctct 19283167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 135 - 240
Target Start/End: Complemental strand, 18074693 - 18074588
Alignment:
Q  135 aattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagattgctcctcttctcacaagattcttctc 234  Q
    |||||||| ||||||||||||||||||||| |||||| |||||||||||||||||| |||||||||||||||||| || |||||||||||||||||||||    
T  18074693 aattataccacttagaattagagaaagttaatcccactcttaccttaaattagatggtcggactctacaagattgatcttcttctcacaagattcttctc 18074594  T
Q  235 ttctct 240  Q
    | ||||    
T  18074593 tcctct 18074588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 129 - 241
Target Start/End: Original strand, 19195611 - 19195725
Alignment:
Q  129 tttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagattgctcctc--ttctcacaaga 226  Q
    |||||||||||||||||| |  ||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||| |||||   ||||||||||    
T  19195611 tttcagaattatacaactcattattagagaaagctagtcccacccttaccttagattagatgatcggactctacaagattgttcctcctatctcacaaga 19195710  T
Q  227 ttcttctcttctctg 241  Q
    |||||||||||||||    
T  19195711 ttcttctcttctctg 19195725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 151 - 241
Target Start/End: Complemental strand, 58443 - 58353
Alignment:
Q  151 attagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagattgctcctcttctcacaagattcttctcttctctg 241  Q
    ||||||||||| ||||||||||||||||||| |||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||    
T  58443 attagagaaagctagtcccacccttaccttagattagatgatcggaatctacaagattgttcctcttctcacaagattcttctcttctctg 58353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 151 - 241
Target Start/End: Complemental strand, 14160886 - 14160796
Alignment:
Q  151 attagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagattgctcctcttctcacaagattcttctcttctctg 241  Q
    |||| |||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  14160886 attaaagaaggttagtcccacccttatcttaaattagatgatcggactctacaagattgctcctcttcacacaagattcttctcttctctg 14160796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 21 - 187
Target Start/End: Original strand, 33002053 - 33002211
Alignment:
Q  21 aattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacatgct 120  Q
    |||||||||| |||||||| |||| |||||| |   ||||||||||||||||||| || ||||||||||||||||||| |||||||||||       | |    
T  33002053 aattctacaccaattcaacagattctctactattacaacaaccaattacaacttctaaccctaattcccaaattccca-aactacaacct-------gtt 33002144  T
Q  121 aaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattag 187  Q
    |||  |||||||||||| |||||||||||||||||||||||||||||| ||||||||||||| ||||    
T  33002145 aaatccaatttcagaatcatacaacttagaattagagaaagttagtccgacccttaccttaagttag 33002211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 59 - 181
Target Start/End: Complemental strand, 15095759 - 15095637
Alignment:
Q  59 caaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacatgctaaactcaa-tttcagaattatacaacttagaattagag 157  Q
    |||| |||||||||||| |||||||||||||||||||||| |||||||||||||||| || |||| |||| ||||||||| |||| |||||||||||| |    
T  15095759 caactaattacaacttctaaacctaattcccaaattcccaaaactacaacctacaacctgttaaattcaattttcagaatcatac-acttagaattagtg 15095661  T
Q  158 aaagttagtcccacccttacctta 181  Q
    || |||||||||||||||||||||    
T  15095660 aaggttagtcccacccttacctta 15095637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 59 - 181
Target Start/End: Complemental strand, 48807448 - 48807325
Alignment:
Q  59 caaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacatgctaaactcaattt-cagaattatacaacttagaattagag 157  Q
    |||||||||||||||||   ||| |||||||||||||||| |||||||| ||||||| || |||| || |||| ||||||||||| ||||||||||||||    
T  48807448 caaccaattacaacttctgtaccaaattcccaaattcccaaaactacaatctacaacttgttaaattcgattttcagaattataccacttagaattagag 48807349  T
Q  158 aaagttagtcccacccttacctta 181  Q
    ||||||||||||||||||||||||    
T  48807348 aaagttagtcccacccttacctta 48807325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 69 - 181
Target Start/End: Complemental strand, 14219008 - 14218895
Alignment:
Q  69 caacttcaaaacctaattcccaaattcccataactacaacctacaacatgctaaactcaattt-cagaattatacaacttagaattagagaaagttagtc 167  Q
    ||||||| |||||||||||| |||||| || |||||||||||||||| || |||| ||||||| ||||||||||| ||||||||||||||||||||||||    
T  14219008 caacttctaaacctaattccaaaattctcaaaactacaacctacaacttgttaaattcaattttcagaattataccacttagaattagagaaagttagtc 14218909  T
Q  168 ccacccttacctta 181  Q
     |||||||||||||    
T  14218908 tcacccttacctta 14218895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 69 - 181
Target Start/End: Complemental strand, 35771554 - 35771441
Alignment:
Q  69 caacttcaaaacctaattcccaaattcccataactacaacctacaacatgctaaactcaattt-cagaattatacaacttagaattagagaaagttagtc 167  Q
    ||||||| |||||||||||||||||| ||| |||||||||||||||| || |||| || |||| ||||||||||  ||||||||||||||||||||||||    
T  35771554 caacttctaaacctaattcccaaatttccaaaactacaacctacaacttgttaaattcgattttcagaattatatcacttagaattagagaaagttagtc 35771455  T
Q  168 ccacccttacctta 181  Q
    ||||||||||||||    
T  35771454 ccacccttacctta 35771441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 129 - 241
Target Start/End: Complemental strand, 32160252 - 32160140
Alignment:
Q  129 tttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagattgctcctcttctcacaagatt 228  Q
    ||||||||||| |  ||||||||||||||||||||||||  ||||||||||||  |||   ||||| |||||||||||||||||||||||||||||||||    
T  32160252 tttcagaattaaattacttagaattagagaaagttagtcttacccttaccttaggttaatcgatcgaactctacaagattgctcctcttctcacaagatt 32160153  T
Q  229 cttctcttctctg 241  Q
    |||||||||||||    
T  32160152 cttctcttctctg 32160140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 59 - 181
Target Start/End: Complemental strand, 8135359 - 8135238
Alignment:
Q  59 caaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacatgctaaactcaatttcagaattatacaacttagaattagaga 158  Q
    ||||||||||||||||| ||||||||||| |||||||| | |||||||||||||||| || |||| ||||||||||||| |||| |||||| ||||| ||    
T  8135359 caaccaattacaacttctaaacctaattctcaaattcctaaaactacaacctacaacctgttaaattcaatttcagaatcatac-acttaggattagtga 8135261  T
Q  159 aagttagtcccacccttacctta 181  Q
    | ||||||| |||||||||||||    
T  8135260 aggttagtctcacccttacctta 8135238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 52 - 182
Target Start/End: Original strand, 25943041 - 25943171
Alignment:
Q  52 ctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacatgctaaactcaatttcagaattatacaacttagaa 151  Q
    |||||||||||||||||| |||||||||||||||| |||||||| || |   |||| | ||||||||||||| |||||||||||||||||||||  | ||    
T  25943041 ctattaacaaccaattacgacttcaaaacctaatttccaaattcacaaattcacaaacaacaacatgctaaattcaatttcagaattatacaacccaaaa 25943140  T
Q  152 ttagagaaagttagtcccacccttaccttaa 182  Q
    ||||||||||||| ||||||| |||| ||||    
T  25943141 ttagagaaagttaatcccaccgttacattaa 25943171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 59 - 181
Target Start/End: Original strand, 15140143 - 15140265
Alignment:
Q  59 caaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacatgctaaactcaa-tttcagaattatacaacttagaattagag 157  Q
    ||||||||||||||||  |||||||||||||||||||||| |||||||||||||||| || |||| |||| ||||||||| |||| |||||||||||| |    
T  15140143 caaccaattacaacttttaaacctaattcccaaattcccaaaactacaacctacaacctgttaaattcaattttcagaatcatac-acttagaattagtg 15140241  T
Q  158 aaagttagtcccacccttacctta 181  Q
    || ||||||| ||||| |||||||    
T  15140242 aaggttagtctcacccatacctta 15140265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 69 - 181
Target Start/End: Original strand, 4071759 - 4071872
Alignment:
Q  69 caacttcaaaacctaattcccaaattcccataactacaacctacaacatgctaaactcaattt-cagaattatacaacttagaattagagaaagttagtc 167  Q
    ||||||| ||||||||||| ||||| |||| |||||||||||||||| || ||||  |||||| |||| |||||  ||||||||||||||||||||||||    
T  4071759 caacttctaaacctaattctcaaatccccaaaactacaacctacaacttgttaaatccaattttcagagttatatcacttagaattagagaaagttagtc 4071858  T
Q  168 ccacccttacctta 181  Q
    ||||||||||||||    
T  4071859 ccacccttacctta 4071872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 81 - 181
Target Start/End: Original strand, 16078281 - 16078382
Alignment:
Q  81 ctaattcccaaattcccataactacaacctacaacatgctaaactcaattt-cagaattatacaacttagaattagagaaagttagtcccacccttacct 179  Q
    |||||||||||||||||| |||||||| ||||||| || |||| || |||| || |||||||| ||||||||||||||||||||||||||||||||||||    
T  16078281 ctaattcccaaattcccaaaactacaaactacaacttgttaaattcgattttcataattataccacttagaattagagaaagttagtcccacccttacct 16078380  T
Q  180 ta 181  Q
    ||    
T  16078381 ta 16078382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 59 - 181
Target Start/End: Complemental strand, 13698761 - 13698638
Alignment:
Q  59 caaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacatgctaaactcaa-tttcagaattatacaacttagaattagag 157  Q
    ||||||||||||||||| || ||||||||||||||| ||| |||||||||||| ||||||  |||  ||| |||||||||||  ||||||| ||||| ||    
T  13698761 caaccaattacaacttctaaccctaattcccaaatttccaaaactacaacctaaaacatgtcaaatccaattttcagaattaatcaacttaaaattaaag 13698662  T
Q  158 aaagttagtcccacccttacctta 181  Q
    ||||||||||| ||||||||||||    
T  13698661 aaagttagtcctacccttacctta 13698638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 60 - 181
Target Start/End: Original strand, 15623950 - 15624070
Alignment:
Q  60 aaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacatgctaaactcaatttcagaattatacaacttagaattagagaa 159  Q
    |||||||||||||| | ||||||||||| |||||||||| |||||||| ||||||| |  |||| ||||||||||||| |||| |||||||||||  |||    
T  15623950 aaccaattacaactcctaaacctaattctcaaattcccaaaactacaaactacaacctattaaattcaatttcagaatcatac-acttagaattattgaa 15624048  T
Q  160 agttagtcccacccttacctta 181  Q
     ||||||| |||||||||||||    
T  15624049 ggttagtctcacccttacctta 15624070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 133 - 241
Target Start/End: Complemental strand, 8488142 - 8488034
Alignment:
Q  133 agaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagattgctcctcttctcacaagattcttc 232  Q
    |||||||||||||  |  |||||||||||||||||||||||||||||||  |||   ||||| ||| |||||||||| || |||||||||||||||||||    
T  8488142 agaattatacaacccattattagagaaagttagtcccacccttaccttaggttaatcgatcgaactttacaagattgttcttcttctcacaagattcttc 8488043  T
Q  233 tcttctctg 241  Q
    |||||||||    
T  8488042 tcttctctg 8488034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 129 - 194
Target Start/End: Complemental strand, 4690715 - 4690650
Alignment:
Q  129 tttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcg 194  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||  |||||||||||    
T  4690715 tttcagaattatacaacttagaattagagaaagttagtcccacctttaccttaggttagatgatcg 4690650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 111 - 184
Target Start/End: Complemental strand, 13744728 - 13744655
Alignment:
Q  111 acaacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaat 184  Q
    ||||||||||||||| ||||||||||||||||||| || ||||||||||||||| |||||||||||| ||||||    
T  13744728 acaacatgctaaacttaatttcagaattatacaacctaaaattagagaaagttaatcccacccttacgttaaat 13744655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 133 - 241
Target Start/End: Complemental strand, 8513801 - 8513693
Alignment:
Q  133 agaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagattgctcctcttctcacaagattcttc 232  Q
    |||||||||||||  |  |||||||||||||||||||||||||||||||  |||   ||||| ||| |||||||||| || | |||||||||||||||||    
T  8513801 agaattatacaacccattattagagaaagttagtcccacccttaccttaggttaatcgatcgaactttacaagattgttcttattctcacaagattcttc 8513702  T
Q  233 tcttctctg 241  Q
    |||||||||    
T  8513701 tcttctctg 8513693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 59 - 139
Target Start/End: Complemental strand, 13132443 - 13132363
Alignment:
Q  59 caaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacatgctaaactcaatttcagaatta 139  Q
    ||||| ||||||||||| |||||||||||||||||||||| |||||| ||||||||| || |||| |||||||||||||||    
T  13132443 caaccgattacaacttctaaacctaattcccaaattcccaaaactacgacctacaacttgttaaattcaatttcagaatta 13132363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 129 - 220
Target Start/End: Original strand, 38299748 - 38299841
Alignment:
Q  129 tttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatga--tcggactctacaagattgctcctcttctc 220  Q
    |||||||||||||||||  |  ||||||||||| ||||||||||||||||||| |||||||||  || ||||||||||| ||||||||||||||    
T  38299748 tttcagaattatacaacccattattagagaaagctagtcccacccttaccttagattagatgatttcagactctacaagcttgctcctcttctc 38299841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 100 - 181
Target Start/End: Complemental strand, 10658932 - 10658851
Alignment:
Q  100 aactacaacctacaacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 181  Q
    ||||||| ||||||| ||| ||||  |||||||||||| |||||||||||||||| |||| |||||||||||||||||||||    
T  10658932 aactacatcctacaaaatgttaaatccaatttcagaatcatacaacttagaattaaagaaggttagtcccacccttacctta 10658851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 61 - 181
Target Start/End: Original strand, 12557853 - 12557973
Alignment:
Q  61 accaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacatgctaaactcaa-tttcagaattatacaacttagaattagagaa 159  Q
    ||||||| ||||||| |||||||||| ||||||||||| |||||||||||||||| || |||| |||| ||| ||||| |||| |||||||||||| |||    
T  12557853 accaatttcaacttctaaacctaatttccaaattcccaaaactacaacctacaacctgttaaattcaatttttagaatcatac-acttagaattagtgaa 12557951  T
Q  160 agttagtcccacccttacctta 181  Q
     ||||||| ||| |||| ||||    
T  12557952 ggttagtctcactcttatctta 12557973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 77 - 181
Target Start/End: Original strand, 15289052 - 15289157
Alignment:
Q  77 aaacctaattcccaaattcccataactacaacctacaacatgctaaactcaattt-cagaattatacaacttagaattagagaaagttagtcccaccctt 175  Q
    ||||||||||| ||||| | || |||||||||||||||| || ||||  |||||| |||| |||||  |||||||||||||||||||| |||||||||||    
T  15289052 aaacctaattctcaaatcctcaaaactacaacctacaacttgttaaatccaattttcagagttataatacttagaattagagaaagttggtcccaccctt 15289151  T
Q  176 acctta 181  Q
    ||||||    
T  15289152 acctta 15289157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 166 - 236
Target Start/End: Original strand, 16214511 - 16214581
Alignment:
Q  166 tcccacccttaccttaaattagatgatcggactctacaagattgctcctcttctcacaagattcttctctt 236  Q
    ||||||||||||||||  |||   ||||| |||||||||||||||||||||||||||||||||||||||||    
T  16214511 tcccacccttaccttaggttaatcgatcgaactctacaagattgctcctcttctcacaagattcttctctt 16214581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 151 - 240
Target Start/End: Complemental strand, 15119337 - 15119248
Alignment:
Q  151 attagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagattgctcctcttctcacaagattcttctcttctct 240  Q
    |||| |||| |||||||| ||||||||||||  |||   ||||  ||||||||||||||||||||||||||||| |||||||||||||||    
T  15119337 attaaagaaggttagtcctacccttaccttaggttaatcgatcaaactctacaagattgctcctcttctcacaatattcttctcttctct 15119248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 59 - 181
Target Start/End: Original strand, 11054642 - 11054765
Alignment:
Q  59 caaccaattacaacttcaaaacctaatt-cccaaattcccataactacaacctacaacatgctaaactcaa-tttcagaattatacaacttagaattaga 156  Q
    ||||||||||||||||  || ||||||| |||||||||||| || ||||||||||||| || |||| |||| ||||||||| | || ||||||||| |      
T  11054642 caaccaattacaacttataaccctaatttcccaaattcccaaaattacaacctacaacctgttaaattcaattttcagaatcaaac-acttagaatcatt 11054740  T
Q  157 gaaagttagtcccacccttacctta 181  Q
    ||| |||||||||||||||||||||    
T  11054741 gaaggttagtcccacccttacctta 11054765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 151 - 220
Target Start/End: Complemental strand, 13744540 - 13744469
Alignment:
Q  151 attagagaaagttagtcccacccttaccttaaattagatgat--cggactctacaagattgctcctcttctc 220  Q
    ||||||||||| ||||||||||||||||||| ||||||||||  | ||||||||||| ||||||||||||||    
T  13744540 attagagaaagctagtcccacccttaccttagattagatgattacagactctacaagcttgctcctcttctc 13744469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 80 - 186
Target Start/End: Complemental strand, 36704673 - 36704566
Alignment:
Q  80 cctaattcccaaattc-ccataactacaacctacaacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttacc 178  Q
    |||||||| ||||| | ||| ||||||| | ||||||||| ||||   ||||||||||||| |||||||| ||||| |||| ||||||||||||||||||    
T  36704673 cctaattctcaaatcctccaaaactacatcttacaacatgttaaatcaaatttcagaattacacaacttaaaattaaagaaggttagtcccacccttacc 36704574  T
Q  179 ttaaatta 186  Q
    ||| ||||    
T  36704573 ttagatta 36704566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 163 - 220
Target Start/End: Complemental strand, 14156410 - 14156353
Alignment:
Q  163 tagtcccacccttaccttaaattagatgatcggactctacaagattgctcctcttctc 220  Q
    ||||||||||||||||||| ||||||| |||||  |||||||||||||||||||||||    
T  14156410 tagtcccacccttaccttagattagattatcggtatctacaagattgctcctcttctc 14156353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 129 - 181
Target Start/End: Complemental strand, 29052234 - 29052182
Alignment:
Q  129 tttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 181  Q
    ||||||||||| |  ||||||||||||||||||||||||||||||||||||||    
T  29052234 tttcagaattaaaatacttagaattagagaaagttagtcccacccttacctta 29052182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 61 - 141
Target Start/End: Original strand, 41284963 - 41285043
Alignment:
Q  61 accaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacatgctaaactcaatttcagaattata 141  Q
    |||||||| |||||| |||||||||||||||||||| | |||||||||||| ||| |  ||||  ||||||||||||||||    
T  41284963 accaattataacttctaaacctaattcccaaattcctaaaactacaacctataacctattaaatccaatttcagaattata 41285043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 129 - 194
Target Start/End: Original strand, 43745656 - 43745721
Alignment:
Q  129 tttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcg 194  Q
    ||||| |||||||||||| |  ||||||||||| |||||||||||||||||||  |||||||||||    
T  43745656 tttcataattatacaactcattattagagaaagctagtcccacccttaccttaggttagatgatcg 43745721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 111 - 220
Target Start/End: Complemental strand, 13315152 - 13315041
Alignment:
Q  111 acaacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatga--tcggactctacaagatt 208  Q
    |||||||| ||||| |  ||||||||| |||||||  |  ||||||||||| ||||| ||||||||||||| ||||||| |  || ||||||||||| ||    
T  13315152 acaacatgttaaaccccttttcagaatcatacaacccattattagagaaagatagtctcacccttaccttagattagattatttcagactctacaagctt 13315053  T
Q  209 gctcctcttctc 220  Q
    |||||| |||||    
T  13315052 gctcctattctc 13315041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 129 - 181
Target Start/End: Complemental strand, 16250274 - 16250222
Alignment:
Q  129 tttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 181  Q
    ||||| |||||||||||| |  |||||||||||||||||||||||||||||||    
T  16250274 tttcaaaattatacaactcattattagagaaagttagtcccacccttacctta 16250222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 129 - 181
Target Start/End: Complemental strand, 16550057 - 16550005
Alignment:
Q  129 tttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 181  Q
    ||||||||||| |  ||||||||||||||||||||||||||| ||||||||||    
T  16550057 tttcagaattaaaatacttagaattagagaaagttagtcccaaccttacctta 16550005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 129 - 181
Target Start/End: Original strand, 16615605 - 16615657
Alignment:
Q  129 tttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 181  Q
    ||||||||||| |  ||||||||||||||||||||||||||| ||||||||||    
T  16615605 tttcagaattaaaatacttagaattagagaaagttagtcccaaccttacctta 16615657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 129 - 181
Target Start/End: Original strand, 18955330 - 18955382
Alignment:
Q  129 tttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 181  Q
    |||||||||||||  |||||||||||||||||||||||| |||| ||||||||    
T  18955330 tttcagaattataacacttagaattagagaaagttagtctcacctttacctta 18955382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 151 - 220
Target Start/End: Original strand, 25943289 - 25943360
Alignment:
Q  151 attagagaaagttagtcccacccttaccttaaattagatgat--cggactctacaagattgctcctcttctc 220  Q
    ||||||||||| ||||||||||||||||||| ||||||||||  | ||||||||||| ||| || |||||||    
T  25943289 attagagaaagctagtcccacccttaccttatattagatgattacagactctacaagtttgttcatcttctc 25943360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 73 - 181
Target Start/End: Complemental strand, 36685253 - 36685146
Alignment:
Q  73 ttcaaaacctaattcccaaattcccataactacaacctacaacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacc 172  Q
    |||||| ||||||||||||||| ||| |||||||||||||||| || ||||  || ||||||||||| |  ||| |||||||  ||| ||| || |||||    
T  36685253 ttcaaaccctaattcccaaatttccaaaactacaacctacaacctgttaaatccagtttcagaattaca-tactcagaattattgaaggttggttccacc 36685155  T
Q  173 cttacctta 181  Q
    |||||||||    
T  36685154 cttacctta 36685146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 151 - 220
Target Start/End: Original strand, 37539470 - 37539541
Alignment:
Q  151 attagagaaagttagtcccacccttaccttaaattagatgat--cggactctacaagattgctcctcttctc 220  Q
    |||| |||| ||||||||||||||||| ||| ||||||||||  | ||||||||||| ||||||||||||||    
T  37539470 attatagaatgttagtcccacccttactttagattagatgattacagactctacaagcttgctcctcttctc 37539541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 59
Target Start/End: Original strand, 25942358 - 25942401
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaac 59  Q
    ||||||||| ||||||||||||| ||||||||||||||||||||    
T  25942358 acatcaattgtacacaaattcaatggattttctactctattaac 25942401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 88 - 181
Target Start/End: Complemental strand, 30820243 - 30820151
Alignment:
Q  88 ccaaattcccataactacaacctacaacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 181  Q
    ||||||||||| |||||||||||||||| || ||||  || ||||||||||| |  ||| |||||||  ||| |||||||||||||| ||||||    
T  30820243 ccaaattcccaaaactacaacctacaacctgttaaatccagtttcagaattaca-tactcagaattactgaaggttagtcccaccctcacctta 30820151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 181
Target Start/End: Original strand, 3287744 - 3287796
Alignment:
Q  129 tttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 181  Q
    ||||||||||||||||| ||  ||||||||||| ||||| |||||||||||||    
T  3287744 tttcagaattatacaacctattattagagaaagctagtctcacccttacctta 3287796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 151 - 220
Target Start/End: Complemental strand, 8930795 - 8930725
Alignment:
Q  151 attagagaaagttagtcccacccttaccttaaattagatgat--cggactctacaagattgctcctcttctc 220  Q
    ||||||||||  ||||||||||||||||||| ||||||||||  ||||| ||| ||| ||||||||||||||    
T  8930795 attagagaaatgtagtcccacccttaccttagattagatgattccggacgcta-aagcttgctcctcttctc 8930725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 109 - 180
Target Start/End: Complemental strand, 14928362 - 14928290
Alignment:
Q  109 ctacaacatgctaaactcaattt-cagaattatacaacttagaattagagaaagttagtcccacccttacctt 180  Q
    |||||||||| ||||  |||||| |||||||| | ||||||||||||  ||| ||||||||||||||||||||    
T  14928362 ctacaacatgttaaatacaattttcagaattaaagaacttagaattactgaaggttagtcccacccttacctt 14928290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 109 - 180
Target Start/End: Complemental strand, 15351828 - 15351756
Alignment:
Q  109 ctacaacatgctaaactcaattt-cagaattatacaacttagaattagagaaagttagtcccacccttacctt 180  Q
    |||||||||| ||||  |||||| |||||||| | ||||||||||||  ||| ||||||||||||||||||||    
T  15351828 ctacaacatgttaaatacaattttcagaattaaagaacttagaattactgaaggttagtcccacccttacctt 15351756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 181
Target Start/End: Original strand, 18990847 - 18990899
Alignment:
Q  129 tttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 181  Q
    |||||||||||||  |||||||||||||||||||||||  |||| ||||||||    
T  18990847 tttcagaattataacacttagaattagagaaagttagtatcacctttacctta 18990899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 181
Target Start/End: Complemental strand, 20252234 - 20252182
Alignment:
Q  129 tttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 181  Q
    |||||||||||||||||| |  ||||||||||| |||||| ||||||||||||    
T  20252234 tttcagaattatacaactcattattagagaaagctagtcctacccttacctta 20252182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 80 - 180
Target Start/End: Original strand, 32302177 - 32302278
Alignment:
Q  80 cctaattcccaaattcccataactacaacctacaacatgctaaactcaattt--cagaattatacaacttagaattagagaaagttagtcccacccttac 177  Q
    |||||||||||||| | || ||||| ||||||||||||| ||||  ||||||  |||||||| |  |||||||||||  ||| | |||||||||||||||    
T  32302177 cctaattcccaaatcctcaaaacta-aacctacaacatgttaaatacaatttttcagaattaaaacacttagaattattgaaggctagtcccacccttac 32302275  T
Q  178 ctt 180  Q
    |||    
T  32302276 ctt 32302278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 180
Target Start/End: Original strand, 14259346 - 14259445
Alignment:
Q  80 cctaattcccaaattcccataactacaacctacaacatgctaaactcaattt-cagaattatacaacttagaattagagaaagttagtcccacccttacc 178  Q
    |||||||||||||||| || ||||| |  |||||||||| ||||  |||||| |||||||| |  |||||||||||  ||| | ||||||||||||||||    
T  14259346 cctaattcccaaattctcaaaactaaa--ctacaacatgttaaatacaattttcagaattaaaacacttagaattattgaaggctagtcccacccttacc 14259443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 181
Target Start/End: Complemental strand, 708481 - 708429
Alignment:
Q  129 tttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 181  Q
    |||||||||||||||||  |  ||||||||||| ||||||||||| |||||||    
T  708481 tttcagaattatacaacccattattagagaaagctagtcccacccctacctta 708429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 181
Target Start/End: Complemental strand, 15575701 - 15575649
Alignment:
Q  129 tttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 181  Q
    |||||||||||||||||  |  ||||||||||| ||||||||||| |||||||    
T  15575701 tttcagaattatacaacccattattagagaaagctagtcccacccctacctta 15575649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 181
Target Start/End: Complemental strand, 18874717 - 18874665
Alignment:
Q  129 tttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 181  Q
    |||||||||||||||||  |  ||||||||||| ||||| |||||||||||||    
T  18874717 tttcagaattatacaacccattattagagaaagctagtctcacccttacctta 18874665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 181
Target Start/End: Original strand, 47095452 - 47095504
Alignment:
Q  129 tttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 181  Q
    |||||||||||| ||||  |  ||||||||||| |||||||||||||||||||    
T  47095452 tttcagaattattcaacccattattagagaaagctagtcccacccttacctta 47095504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 222; Significance: 1e-122; HSPs: 41)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 16 - 241
Target Start/End: Original strand, 7827859 - 7828084
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7827859 acatcaattctacacaaattcaaccgattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 7827958  T
Q  116 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagattgctcctc 215  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7827959 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagattgctcctc 7828058  T
Q  216 ttctcacaagattcttctcttctctg 241  Q
    ||||||||||||||||||||||||||    
T  7828059 ttctcacaagattcttctcttctctg 7828084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 16 - 241
Target Start/End: Complemental strand, 19655396 - 19655171
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19655396 acatcaattctacacaaattcaacggattttctactctattaacaactaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 19655297  T
Q  116 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagattgctcctc 215  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||    
T  19655296 atgttaaactcaatttcagaattatacaacttagaattagagaaagttagtctcacccttaccttaaattagatgatcggactctacaagattgctcatc 19655197  T
Q  216 ttctcacaagattcttctcttctctg 241  Q
    ||||||||||||||||||||||||||    
T  19655196 ttctcacaagattcttctcttctctg 19655171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 16 - 241
Target Start/End: Complemental strand, 23150452 - 23150227
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    ||||||||||||||||||||||||  ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23150452 acatcaattctacacaaattcaacaaattttatactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 23150353  T
Q  116 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagattgctcctc 215  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23150352 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagattgctcctc 23150253  T
Q  216 ttctcacaagattcttctcttctctg 241  Q
    ||||||||||||| ||||||||||||    
T  23150252 ttctcacaagatttttctcttctctg 23150227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 16 - 241
Target Start/End: Original strand, 18703451 - 18703680
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaatt----acaacttcaaaacctaattcccaaattcccataactacaaccta 111  Q
    |||||| ||||| |||||||||||||||||||||||||||||||||||||||    |||||||||||| |||||||||||||||||||||||||||||||    
T  18703451 acatcacttctatacaaattcaacggattttctactctattaacaaccaattaattacaacttcaaaatctaattcccaaattcccataactacaaccta 18703550  T
Q  112 caacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagattgct 211  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |    
T  18703551 caacattctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacacttaccttaaattagatgatcggactctacaagattgtt 18703650  T
Q  212 cctcttctcacaagattcttctcttctctg 241  Q
    |||||||||| |||||||||||||||||||    
T  18703651 cctcttctcataagattcttctcttctctg 18703680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 16 - 241
Target Start/End: Original strand, 18709386 - 18709615
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaatt----acaacttcaaaacctaattcccaaattcccataactacaaccta 111  Q
    |||||| ||||| |||||||||||||||||||||||||||||||||||||||    |||||||||||| |||||||||||||||||||||||||||||||    
T  18709386 acatcacttctatacaaattcaacggattttctactctattaacaaccaattaattacaacttcaaaatctaattcccaaattcccataactacaaccta 18709485  T
Q  112 caacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagattgct 211  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |    
T  18709486 caacattctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacacttaccttaaattagatgatcggactctacaagattgtt 18709585  T
Q  212 cctcttctcacaagattcttctcttctctg 241  Q
    |||||||||| |||||||||||||||||||    
T  18709586 cctcttctcataagattcttctcttctctg 18709615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 16 - 240
Target Start/End: Complemental strand, 27125642 - 27125419
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    |||||| ||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  27125642 acatcacttctatacaaattcaacggattttctactctattaacaactaattacaacttcaaaacctaagtcccaaattcccataactacaacctacaac 27125543  T
Q  116 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagattgctcctc 215  Q
    ||||||| |||||||| ||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||    
T  27125542 atgctaatctcaattttagacttatacaacttagaattagagaaagttagtctcacccttaccttaaattagatgatcggactctacaagattgctcatc 27125443  T
Q  216 ttctcacaagattcttctcttctct 240  Q
    ||||||||| |||| ||||||||||    
T  27125442 ttctcacaaaattc-tctcttctct 27125419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 16 - 181
Target Start/End: Complemental strand, 15890877 - 15890712
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  || ||||||||||||||||    
T  15890877 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattaacaaaactacaacctacaac 15890778  T
Q  116 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 181  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15890777 atgttaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 15890712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 31 - 181
Target Start/End: Complemental strand, 27330131 - 27329981
Alignment:
Q  31 aaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacatgctaaactcaatt 130  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||    
T  27330131 aaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattgccataactacaacctacaacatgttaaactcaatt 27330032  T
Q  131 tcagaattatacaacttagaattagagaaagttagtcccacccttacctta 181  Q
    ||||||||||||||| ||||||||||||||||||||| ||| |||||||||    
T  27330031 tcagaattatacaacctagaattagagaaagttagtcacactcttacctta 27329981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 31 - 181
Target Start/End: Complemental strand, 27390871 - 27390721
Alignment:
Q  31 aaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacatgctaaactcaatt 130  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||    
T  27390871 aaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattgccataactacaacctacaacatgttaaactcaatt 27390772  T
Q  131 tcagaattatacaacttagaattagagaaagttagtcccacccttacctta 181  Q
    ||||||||||||||| ||||||||||||||||||||| ||| |||||||||    
T  27390771 tcagaattatacaacctagaattagagaaagttagtcacactcttacctta 27390721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 81 - 180
Target Start/End: Original strand, 24267801 - 24267900
Alignment:
Q  81 ctaattcccaaattcccataactacaacctacaacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttacctt 180  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24267801 ctaattctcaaattcccataactacaacctacaacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttacctt 24267900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 20 - 181
Target Start/End: Original strand, 19235015 - 19235175
Alignment:
Q  20 caattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacatgc 119  Q
    ||||| ||||||| ||||| |||||||||||| ||||||||||||||||| ||||||||||||||| ||||||||| || |   |||| | ||||||| |    
T  19235015 caattgtacacaagttcaatggattttctactttattaacaaccaattacgacttcaaaacctaat-cccaaattcacaaattcacaaacaacaacatcc 19235113  T
Q  120 taaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 181  Q
    |||| ||||||||||||||||||||| || ||||||||||||||| ||||||||||| ||||    
T  19235114 taaaatcaatttcagaattatacaacctaaaattagagaaagttaatcccacccttaactta 19235175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 129 - 241
Target Start/End: Complemental strand, 20410564 - 20410452
Alignment:
Q  129 tttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagattgctcctcttctcacaagatt 228  Q
    |||||||||||||||||  |  ||||||||||| || | ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  20410564 tttcagaattatacaacccattattagagaaagctatttccacccttaccttaaattagatgatcgcactctacaagattgctcctcttctcacaagatt 20410465  T
Q  229 cttctcttctctg 241  Q
    |||||||||||||    
T  20410464 cttctcttctctg 20410452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 163 - 241
Target Start/End: Complemental strand, 17318184 - 17318106
Alignment:
Q  163 tagtcccacccttaccttaaattagatgatcggactctacaagattgctcctcttctcacaagattcttctcttctctg 241  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17318184 tagtcccacccttaccttaaattagatgatcggactctacaagattgctcctcttctcacaagattcttctcttctctg 17318106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 57 - 178
Target Start/End: Original strand, 18585733 - 18585854
Alignment:
Q  57 aacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacatgctaaactcaatttcagaattatacaacttagaattaga 156  Q
    ||||||||||||||||||| |||||||||||| ||||| ||| ||||||||||||| || || ||||  || ||||||||| ||||||||||||||||||    
T  18585733 aacaaccaattacaacttctaaacctaattcctaaatttccaaaactacaacctaccacctgttaaatccagtttcagaatcatacaacttagaattaga 18585832  T
Q  157 gaaagttagtcccacccttacc 178  Q
    ||||||||||||||||||||||    
T  18585833 gaaagttagtcccacccttacc 18585854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 63 - 181
Target Start/End: Original strand, 18928614 - 18928733
Alignment:
Q  63 caattacaacttcaaaacctaattcccaaattcccataactacaacctacaacatgctaaactcaattt-cagaattatacaacttagaattagagaaag 161  Q
    ||||||||||||| |||||||||| ||||||||||| |||| ||||||||||| || |||| ||||||| ||||||||||| ||||||||||||||||||    
T  18928614 caattacaacttctaaacctaatttccaaattcccaaaacttcaacctacaacttgttaaattcaattttcagaattataccacttagaattagagaaag 18928713  T
Q  162 ttagtcccacccttacctta 181  Q
    ||||||| ||||||||||||    
T  18928714 ttagtcctacccttacctta 18928733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 21 - 181
Target Start/End: Original strand, 28948466 - 28948627
Alignment:
Q  21 aattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataac-tacaacctacaacatgc 119  Q
    |||||||||| ||||||||  |||||||||| |   ||||||||||||||||||| |||||||||||||||||| | | ||| |||||| ||| || ||     
T  28948466 aattctacaccaattcaacatattttctactattaaaacaaccaattacaacttctaaacctaattcccaaatttctaaaacctacaacttaccacttgt 28948565  T
Q  120 taaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 181  Q
    ||||  || ||||||||| ||||||||||||||||||||||||||||| |||||||||||||    
T  28948566 taaatccagtttcagaatcatacaacttagaattagagaaagttagtctcacccttacctta 28948627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 20 - 181
Target Start/End: Complemental strand, 30673556 - 30673402
Alignment:
Q  20 caattctacacaaattcaacggattttctactctattaacaaccaa-ttacaacttcaaaacctaattcccaaattcccataactacaacctacaacatg 118  Q
    ||||| ||||||||||||| | |||||||||||||||||||||||| |||| | |||||||||||||||| ||||||        |||| | ||| ||||    
T  30673556 caattgtacacaaattcaatgaattttctactctattaacaaccaaattactaattcaaaacctaattccaaaattc--------acaaacaacatcatg 30673465  T
Q  119 ctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 181  Q
    ||||||||||||||| ||||||||||| || ||||||||||||||| ||||||||||||||||    
T  30673464 ctaaactcaatttcaaaattatacaacctaaaattagagaaagttaatcccacccttacctta 30673402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 20 - 181
Target Start/End: Complemental strand, 19167998 - 19167853
Alignment:
Q  20 caattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacatgc 119  Q
    ||||| ||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||                | |||||||||    
T  19167998 caattgtacacaaattcaatggattttctactctattaacaaccaattacgacttcaaaacctaattcccaaa----------------caacaacatgc 19167915  T
Q  120 taaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 181  Q
    |||||||||| ||||||||||||||| ||  |||||| ||||||| | ||||||||||||||    
T  19167914 taaactcaatatcagaattatacaacctaatattagacaaagttaattccacccttacctta 19167853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 63 - 182
Target Start/End: Original strand, 19401028 - 19401147
Alignment:
Q  63 caattacaacttcaaaacctaattcccaaattcccataactacaacctacaacatgctaaactcaa-tttcagaattatacaacttagaattagagaaag 161  Q
    ||||||||||||  ||||||||||| |||||||||| |||||||||||||||| || |||| |||| ||||||||| |||| |||||||||||| ||| |    
T  19401028 caattacaacttataaacctaattctcaaattcccaaaactacaacctacaacctgttaaattcaattttcagaatcatac-acttagaattagtgaagg 19401126  T
Q  162 ttagtcccacccttaccttaa 182  Q
    |||||||||||||||||||||    
T  19401127 ttagtcccacccttaccttaa 19401147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 151 - 241
Target Start/End: Original strand, 31734729 - 31734819
Alignment:
Q  151 attagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagattgctcctcttctcacaagattcttctcttctctg 241  Q
    |||| |||| |||||||||||||||||||||  |||   ||||| |||||||||||||||||||||||||||||||||||| |||||||||    
T  31734729 attaaagaaggttagtcccacccttaccttaggttaatcgatcgaactctacaagattgctcctcttctcacaagattcttttcttctctg 31734819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 106 - 182
Target Start/End: Complemental strand, 27572198 - 27572121
Alignment:
Q  106 aacctacaac-atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaa 182  Q
    |||||||||| ||| |||| |||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||    
T  27572198 aacctacaaccatgttaaattcaatttcagaattatacgacttagaattagagaaagttagtctcacccttaccttaa 27572121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 77 - 181
Target Start/End: Complemental strand, 31732009 - 31731904
Alignment:
Q  77 aaacctaattcccaaattcccataactacaacctacaacatgctaaactcaattt-cagaattatacaacttagaattagagaaagttagtcccaccctt 175  Q
    ||||||||||| ||||| |||| |||||||||||||||| ||  |||  |||||| ||||||||||  |||||||||| |||||||||||||||||||||    
T  31732009 aaacctaattctcaaatccccaaaactacaacctacaacttgtcaaatccaattttcagaattataacacttagaattggagaaagttagtcccaccctt 31731910  T
Q  176 acctta 181  Q
    ||||||    
T  31731909 acctta 31731904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 129 - 220
Target Start/End: Complemental strand, 19825538 - 19825447
Alignment:
Q  129 tttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagattgctcctcttctc 220  Q
    |||||||||||| ||||  |  ||||||||||| ||||| ||||||||||||| ||||||||||||| |||||| |||||||||||||||||    
T  19825538 tttcagaattatgcaacccattattagagaaagctagtctcacccttaccttagattagatgatcggtctctacgagattgctcctcttctc 19825447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 120 - 181
Target Start/End: Original strand, 15998880 - 15998941
Alignment:
Q  120 taaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 181  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  15998880 taaactctttttcagaattatacaacttagaattagagaaagttagtctcacccttacctta 15998941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 78 - 181
Target Start/End: Complemental strand, 24550271 - 24550168
Alignment:
Q  78 aacctaattcccaaattcccataactacaacctacaacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttac 177  Q
    ||||||||||  ||||  ||| ||||||| ||||||||||| ||||  |||||||||||||| |||||||| ||||| ||||  ||||||||||||||||    
T  24550271 aacctaattcttaaatctccaaaactacatcctacaacatgttaaatccaatttcagaattacacaacttacaattaaagaagtttagtcccacccttac 24550172  T
Q  178 ctta 181  Q
    ||||    
T  24550171 ctta 24550168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 161 - 220
Target Start/End: Original strand, 25922033 - 25922092
Alignment:
Q  161 gttagtcccacccttaccttaaattagatgatcggactctacaagattgctcctcttctc 220  Q
    ||||||||||||||||||||| ||||||||||||| |||||| |||||||||||||||||    
T  25922033 gttagtcccacccttaccttagattagatgatcggtctctacgagattgctcctcttctc 25922092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 129 - 181
Target Start/End: Complemental strand, 12041672 - 12041620
Alignment:
Q  129 tttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 181  Q
    |||||||||||||||||||||||||| |||| |||||||||||||||||||||    
T  12041672 tttcagaattatacaacttagaattaaagaaggttagtcccacccttacctta 12041620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 59 - 181
Target Start/End: Original strand, 23501601 - 23501724
Alignment:
Q  59 caaccaattacaacttcaaaacctaattcccaaa-ttcccataactacaacctacaacatgctaaactca-atttcagaattatacaacttagaattaga 156  Q
    |||| |||||||||||| |||||||||||||||| |||| | |||||||||||||||| || |||| |||  ||||||||||| || | |||||||||      
T  23501601 caacaaattacaacttctaaacctaattcccaaatttccaaaaactacaacctacaacttgttaaattcagttttcagaattaaac-atttagaattatt 23501699  T
Q  157 gaaagttagtcccacccttacctta 181  Q
    ||| ||||||| |||||||||||||    
T  23501700 gaaggttagtctcacccttacctta 23501724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 151 - 208
Target Start/End: Complemental strand, 23431477 - 23431420
Alignment:
Q  151 attagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagatt 208  Q
    |||| |||| ||||||||||| ||||||||| ||||||||||||||||||||||||||    
T  23431477 attaaagaaggttagtcccacgcttaccttagattagatgatcggactctacaagatt 23431420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 151 - 220
Target Start/End: Original strand, 10446239 - 10446310
Alignment:
Q  151 attagagaaagttagtcccacccttaccttaaattagatga--tcggactctacaagattgctcctcttctc 220  Q
    ||||||||||| ||||||||||||||||||| |||||||||  || ||||||||| | ||||||||||||||    
T  10446239 attagagaaagctagtcccacccttaccttagattagatgatttcagactctacatgcttgctcctcttctc 10446310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 129 - 220
Target Start/End: Original strand, 13285748 - 13285841
Alignment:
Q  129 tttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatg--atcggactctacaagattgctcctcttctc 220  Q
    ||||||||||||  |||| |  |||| |||| ||||||||||||||||||||| ||||||||   || ||||||||||| ||||||||||||||    
T  13285748 tttcagaattatgaaactcatgattatagaaggttagtcccacccttaccttagattagatggtttcagactctacaagcttgctcctcttctc 13285841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 129 - 181
Target Start/End: Complemental strand, 15173505 - 15173453
Alignment:
Q  129 tttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 181  Q
    ||||||||||| |  ||||||||||||||||||||||||||||| ||||||||    
T  15173505 tttcagaattaaaatacttagaattagagaaagttagtcccaccattacctta 15173453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 137 - 177
Target Start/End: Original strand, 29625191 - 29625231
Alignment:
Q  137 ttatacaacttagaattagagaaagttagtcccacccttac 177  Q
    ||||||||| |||||||||||||||||||||||||||||||    
T  29625191 ttatacaacgtagaattagagaaagttagtcccacccttac 29625231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 26 - 91
Target Start/End: Complemental strand, 18259328 - 18259262
Alignment:
Q  26 tacacaaattcaacggattttctactctattaacaaccaattacaact-tcaaaacctaattcccaa 91  Q
    ||||||||||| | |||||||||| || ||||||||| |||||||| | ||||||||||||||||||    
T  18259328 tacacaaattctatggattttctattcaattaacaactaattacaattctcaaaacctaattcccaa 18259262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 80 - 180
Target Start/End: Complemental strand, 19772767 - 19772667
Alignment:
Q  80 cctaattcccaaattcccataactacaacctacaacatgctaaactcaattt-cagaattatacaacttagaattagagaaagttagtcccacccttacc 178  Q
    |||||||||||||| | || ||||| ||||||||||||| ||||  |||||| |||||||| |  |||||||||||  ||| | ||||||||||||||||    
T  19772767 cctaattcccaaatcctcaaaacta-aacctacaacatgttaaatacaattttcagaattaaaacacttagaattattgaaggctagtcccacccttacc 19772669  T
Q  179 tt 180  Q
    ||    
T  19772668 tt 19772667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 129 - 194
Target Start/End: Complemental strand, 21683127 - 21683062
Alignment:
Q  129 tttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcg 194  Q
    |||| ||||||||||||  |  ||||||||||| |||||||||||||||||||  |||||||||||    
T  21683127 tttctgaattatacaacccattattagagaaagctagtcccacccttaccttaggttagatgatcg 21683062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 129 - 186
Target Start/End: Original strand, 23658089 - 23658146
Alignment:
Q  129 tttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaatta 186  Q
    ||||||||||||||||| ||  ||||| ||||| ||||||||||||||||||| ||||    
T  23658089 tttcagaattatacaacctattattagggaaagctagtcccacccttaccttagatta 23658146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 181
Target Start/End: Complemental strand, 15900706 - 15900654
Alignment:
Q  129 tttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 181  Q
    ||||||||||| |  |||||||||||||||||||| ||| |||||||||||||    
T  15900706 tttcagaattaaaatacttagaattagagaaagttggtctcacccttacctta 15900654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 220
Target Start/End: Complemental strand, 34140474 - 34140415
Alignment:
Q  163 tagtcccacccttaccttaaattagatgat--cggactctacaagattgctcctcttctc 220  Q
    ||||||||||||||||||| ||||||||||  |  |||||||||| ||||||||||||||    
T  34140474 tagtcccacccttaccttagattagatgattacaaactctacaagcttgctcctcttctc 34140415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 220
Target Start/End: Complemental strand, 34153090 - 34153031
Alignment:
Q  163 tagtcccacccttaccttaaattagatgat--cggactctacaagattgctcctcttctc 220  Q
    ||||||||||||||||||| ||||||||||  |  |||||||||| ||||||||||||||    
T  34153090 tagtcccacccttaccttagattagatgattacaaactctacaagcttgctcctcttctc 34153031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 220
Target Start/End: Original strand, 29045271 - 29045363
Alignment:
Q  129 tttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgat--cggactctacaagattgctcctcttctc 220  Q
    ||||| |||||||||||  |  ||||||||||| ||||| ||||||||||||| | ||||||||  || |||||| ||| ||||||||||||||    
T  29045271 tttcaaaattatacaacccattattagagaaagctagtctcacccttaccttagaatagatgattccgaactcta-aagcttgctcctcttctc 29045363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 222; Significance: 1e-122; HSPs: 47)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 16 - 241
Target Start/End: Original strand, 25091540 - 25091765
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25091540 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 25091639  T
Q  116 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagattgctcctc 215  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  25091640 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcgaactctacaagattgctcctc 25091739  T
Q  216 ttctcacaagattcttctcttctctg 241  Q
    ||||||||||||||||||||||||||    
T  25091740 ttctcacaagattcttctcttctctg 25091765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 16 - 241
Target Start/End: Complemental strand, 53630639 - 53630414
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  53630639 acatcaattctacacaaattcaacgaattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 53630540  T
Q  116 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagattgctcctc 215  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||    
T  53630539 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcagactctacaagattgttcctc 53630440  T
Q  216 ttctcacaagattcttctcttctctg 241  Q
    |||||||||||||||||| |||||||    
T  53630439 ttctcacaagattcttcttttctctg 53630414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 16 - 241
Target Start/End: Complemental strand, 10356601 - 10356376
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10356601 acatcaattctacacaaattcaacggattttctactctattaactaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 10356502  T
Q  116 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagattgctcctc 215  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | ||||| ||||||||||||||||||||    
T  10356501 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccaaccttaccttaaattaaaagatcgaactctacaagattgctcctc 10356402  T
Q  216 ttctcacaagattcttctcttctctg 241  Q
    ||||||||||||||||||||||||||    
T  10356401 ttctcacaagattcttctcttctctg 10356376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 16 - 241
Target Start/End: Original strand, 42875684 - 42875909
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  42875684 acatcaattctacacaaattcaacggattttctactctattaacaatcaattacaacttcaaaacctatttcccaaattcccataactacaacctacaac 42875783  T
Q  116 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagattgctcctc 215  Q
    ||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||| ||| |||||||||| ||||||||||    
T  42875784 atgctaaactcaatttcagaattatacaacttagaattatataaagttagtcccacccttaccttaaattagataatcagactctacaaaattgctcctc 42875883  T
Q  216 ttctcacaagattcttctcttctctg 241  Q
    ||||||||||||||||||||||||||    
T  42875884 ttctcacaagattcttctcttctctg 42875909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 16 - 241
Target Start/End: Original strand, 19610211 - 19610436
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||| |||||| |||||||||||||||||||||||||||    
T  19610211 acatcaattctacacaaatttaacggattttctactctattaacaaccaattacaacgtcaaaacttaattctcaaattcccataactacaacctacaac 19610310  T
Q  116 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagattgctcctc 215  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||| ||||||    
T  19610311 atgctaaactcaatttcagaattatacaacttaaaattagagaaagttagtctcacccttaccttaaattagatgatcggattctacaagattactcctc 19610410  T
Q  216 ttctcacaagattcttctcttctctg 241  Q
    ||||||||||||||||||||| ||||    
T  19610411 ttctcacaagattcttctcttttctg 19610436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 16 - 241
Target Start/End: Original strand, 16998412 - 16998637
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    |||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16998412 acatcaatactacacaaattcaacgaattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 16998511  T
Q  116 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagattgctcctc 215  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||   |||| | |||    
T  16998512 atgctaaactcaatttcataattatacaacttagaattagagaaagttagtctcactcttaccttaaattagatgatcggactctacggaattgtttctc 16998611  T
Q  216 ttctcacaagattcttctcttctctg 241  Q
    ||||||||||||||||||||||||||    
T  16998612 ttctcacaagattcttctcttctctg 16998637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 11 - 203
Target Start/End: Original strand, 11425825 - 11426017
Alignment:
Q  11 gatggacatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacct 110  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  11425825 gatgaacatcaattctacacaaattcaacggattttctactctattaacaaccaattacaatttcaaaacctaattcccaaattcccataactacaacct 11425924  T
Q  111 acaacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcggactctaca 203  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||| |||||||    
T  11425925 acaacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaatatgatgatcggtctctaca 11426017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 154; E-Value: 9e-82
Query Start/End: Original strand, 16 - 181
Target Start/End: Original strand, 15115109 - 15115274
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  15115109 acatcaattctacacaaattcaacagattttctactctattaacaaccaattacaacttcaaaaaataattcccaaattcccataactacaacctacaac 15115208  T
Q  116 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 181  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15115209 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 15115274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 20 - 181
Target Start/End: Original strand, 37019561 - 37019722
Alignment:
Q  20 caattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacatgc 119  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||     
T  37019561 caattctacacaaattcaacgaattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattcccataactacaacctacaacatgt 37019660  T
Q  120 taaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 181  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||    
T  37019661 taaactcaatttcagaattatacaacttaaaattagagaaagttagtcacacccttacctta 37019722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 16 - 177
Target Start/End: Complemental strand, 6633701 - 6633541
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    |||||| |||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||    
T  6633701 acatcacttctac-caaattcaacgaattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattctcataactacaacctacaac 6633603  T
Q  116 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttac 177  Q
    |||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  6633602 atgctaaacttaatttcagaattatacaacgtagaattagagaaagttagtcccacccttac 6633541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 16 - 177
Target Start/End: Complemental strand, 46001695 - 46001535
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    |||||| |||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||    
T  46001695 acatcacttctac-caaattcaacgaattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattctcataactacaacctacaac 46001597  T
Q  116 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttac 177  Q
    |||||||||| ||||||||||||||||||| ||||||||||||||||||||| |||||||||    
T  46001596 atgctaaacttaatttcagaattatacaacgtagaattagagaaagttagtctcacccttac 46001535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 129 - 241
Target Start/End: Complemental strand, 12424342 - 12424230
Alignment:
Q  129 tttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagattgctcctcttctcacaagatt 228  Q
    |||||||||||||||||  |  ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  12424342 tttcagaattatacaacccattattagagaaagctagtcccacccttaccttaaattagatgatcggactctacaagattgctcttcttctcacaagatt 12424243  T
Q  229 cttctcttctctg 241  Q
    |||||||||||||    
T  12424242 cttctcttctctg 12424230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 129 - 241
Target Start/End: Complemental strand, 10694297 - 10694185
Alignment:
Q  129 tttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagattgctcctcttctcacaagatt 228  Q
    ||||||||||| |  ||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||    
T  10694297 tttcagaattaaattacttagaattagagaaatttagtctcacccttaccttaaattagatgatcggactctacaagattgctcatcttctcacgagatt 10694198  T
Q  229 cttctcttctctg 241  Q
    |||||||||||||    
T  10694197 cttctcttctctg 10694185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 129 - 241
Target Start/End: Complemental strand, 10908063 - 10907951
Alignment:
Q  129 tttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagattgctcctcttctcacaagatt 228  Q
    ||||||||||| |  ||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||    
T  10908063 tttcagaattaaattacttagaattagagaaatttagtctcacccttaccttaaattagatgatcggactctacaagattgctcatcttctcacgagatt 10907964  T
Q  229 cttctcttctctg 241  Q
    |||||||||||||    
T  10907963 cttctcttctctg 10907951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 129 - 241
Target Start/End: Original strand, 25513851 - 25513963
Alignment:
Q  129 tttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagattgctcctcttctcacaagatt 228  Q
    |||||||||||||||||| |  ||||||||||| |||||||||| |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||    
T  25513851 tttcagaattatacaactcattattagagaaagctagtcccaccattaccttagattagatgatcagactctacaagattgctcctcttctcacaagatt 25513950  T
Q  229 cttctcttctctg 241  Q
    |||||||||||||    
T  25513951 cttctcttctctg 25513963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 129 - 241
Target Start/End: Original strand, 9639010 - 9639122
Alignment:
Q  129 tttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagattgctcctcttctcacaagatt 228  Q
    ||||||||||| |||||| |  ||||||||||| ||||||||||||||||||| ||||||| |||||||||||||||||| |||||||||||||||||||    
T  9639010 tttcagaattacacaactcattattagagaaagctagtcccacccttaccttagattagattatcggactctacaagatttctcctcttctcacaagatt 9639109  T
Q  229 cttctcttctctg 241  Q
    |||||||||||||    
T  9639110 cttctcttctctg 9639122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 61 - 181
Target Start/End: Original strand, 9924085 - 9924206
Alignment:
Q  61 accaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacatgctaaactcaattt-cagaattatacaacttagaattagagaa 159  Q
    ||||||||||||||| |||||||||| ||||||||||| |||| ||||||||||| || |||| ||||||| ||||||||||| ||||||||||||||||    
T  9924085 accaattacaacttctaaacctaatttccaaattcccaaaacttcaacctacaacttgttaaattcaattttcagaattataccacttagaattagagaa 9924184  T
Q  160 agttagtcccacccttacctta 181  Q
    |||||||| |||||||||||||    
T  9924185 agttagtctcacccttacctta 9924206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 151 - 241
Target Start/End: Original strand, 19022366 - 19022456
Alignment:
Q  151 attagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagattgctcctcttctcacaagattcttctcttctctg 241  Q
    ||||||||||||||||| |||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  19022366 attagagaaagttagtctcacctttaccttagattagatgatcggactctacaagattgctcctcttctcacaagattattctcttctctg 19022456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 151 - 241
Target Start/End: Original strand, 40230328 - 40230418
Alignment:
Q  151 attagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagattgctcctcttctcacaagattcttctcttctctg 241  Q
    |||| |||||||||||||||||||||||||| |||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||    
T  40230328 attaaagaaagttagtcccacccttaccttagattagatgattgaactctacaagattgctcctcttctcacaagattcttctcttctctg 40230418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 64 - 181
Target Start/End: Original strand, 14549695 - 14549812
Alignment:
Q  64 aattacaacttcaaaacctaattcccaaattcccataactacaacctacaacatgctaaactcaatttcagaattatacaacttagaattagagaaagtt 163  Q
    |||||||||||| |||||||||||||||||| ||| ||||||||||||| || || ||||  || ||||||||  |||||||||||||||||||||||||    
T  14549695 aattacaacttctaaacctaattcccaaatttccaaaactacaacctaccacctgttaaatccagtttcagaaacatacaacttagaattagagaaagtt 14549794  T
Q  164 agtcccacccttacctta 181  Q
    |||| |||||||||||||    
T  14549795 agtctcacccttacctta 14549812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 68 - 181
Target Start/End: Complemental strand, 19434672 - 19434559
Alignment:
Q  68 acaacttcaaaacctaattcccaaattcccataactacaacctacaacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtc 167  Q
    |||||||| |||| ||||||||||||| | | ||||||||||||| || || ||||  || ||||||||| |||||||||||||||||||||||||||||    
T  19434672 acaacttctaaacttaattcccaaatttcaaaaactacaacctaccacctgttaaatccagtttcagaatcatacaacttagaattagagaaagttagtc 19434573  T
Q  168 ccacccttacctta 181  Q
    ||||||||||||||    
T  19434572 ccacccttacctta 19434559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 59 - 181
Target Start/End: Complemental strand, 9870568 - 9870444
Alignment:
Q  59 caaccaattacaacttcaaaacctaatt-cccaaattcccataactacaacctacaacatgctaaactcaattt-cagaattatacaacttagaattaga 156  Q
    ||||||||||||||||| || ||||||| |||||||||||| |||||||||||||| ||||  |||  |||||| |||||||||||||||||||||||      
T  9870568 caaccaattacaacttctaaccctaatttcccaaattcccaaaactacaacctacatcatgtcaaatccaattttcagaattatacaacttagaattatg 9870469  T
Q  157 gaaagttagtcccacccttacctta 181  Q
    |||||||||||||||||||| ||||    
T  9870468 gaaagttagtcccacccttagctta 9870444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 63 - 181
Target Start/End: Complemental strand, 11478772 - 11478653
Alignment:
Q  63 caattacaacttcaaaacctaattcccaaattcccataactacaacctacaacatgctaaactcaattt-cagaattatacaacttagaattagagaaag 161  Q
    ||||||||| ||| |||||||||| ||||||||||| |||| ||| ||||||| || |||| ||||||| ||||||||||| |||||||||||||| |||    
T  11478772 caattacaagttctaaacctaatttccaaattcccaaaacttcaatctacaacttgttaaattcaattttcagaattataccacttagaattagaggaag 11478673  T
Q  162 ttagtcccacccttacctta 181  Q
    |||||| |||||||||||||    
T  11478672 ttagtctcacccttacctta 11478653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 100 - 181
Target Start/End: Original strand, 15613061 - 15613142
Alignment:
Q  100 aactacaacctacaacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 181  Q
    ||||||| ||||||||||| ||||  ||||||||||||||||||||||||||||| |||| |||||||||||||||||||||    
T  15613061 aactacatcctacaacatgttaaatccaatttcagaattatacaacttagaattaaagaaggttagtcccacccttacctta 15613142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 78 - 181
Target Start/End: Original strand, 21144 - 21248
Alignment:
Q  78 aacctaattcccaaattcccataactacaacctacaacatgctaaactcaatt-tcagaattatacaacttagaattagagaaagttagtcccaccctta 176  Q
    |||||||||| ||||| | || ||||||||||||||||||| |||| |||||| |||||||||||||||||||||||| |||| ||||||| || |||||    
T  21144 aacctaattctcaaatcctcaaaactacaacctacaacatgttaaattcaattctcagaattatacaacttagaattaaagaaggttagtctcatcctta 21243  T
Q  177 cctta 181  Q
    |||||    
T  21244 cctta 21248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 129 - 220
Target Start/End: Original strand, 33186903 - 33186994
Alignment:
Q  129 tttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagattgctcctcttctc 220  Q
    |||||||||||||||||  |  ||||||||||| ||||| ||||| |||||||||||||||||||||||||||||| |||||||||| ||||    
T  33186903 tttcagaattatacaacccattattagagaaagctagtctcacccctaccttaaattagatgatcggactctacaaaattgctcctcctctc 33186994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 28 - 94
Target Start/End: Complemental strand, 26921774 - 26921708
Alignment:
Q  28 cacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaatt 94  Q
    ||||||||||  |||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  26921774 cacaaattcattggattttctactctattaacaaccaattacgacttcaaaacctaattcccaaatt 26921708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 151 - 241
Target Start/End: Complemental strand, 44023633 - 44023547
Alignment:
Q  151 attagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagattgctcctcttctcacaagattcttctcttctctg 241  Q
    |||| |||| ||||||| ||||||||||||| |||    |||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  44023633 attaaagaaggttagtcgcacccttaccttagatt----gatcggactctacaagattgctcctcttttcacaagattcttctcttctctg 44023547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 100 - 181
Target Start/End: Original strand, 51993532 - 51993613
Alignment:
Q  100 aactacaacctacaacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 181  Q
    ||||||| ||||||||||| ||||  |||||||||||||| |||||||||||||| |||| |||||||||||||||||||||    
T  51993532 aactacatcctacaacatgttaaatccaatttcagaattacacaacttagaattaaagaaggttagtcccacccttacctta 51993613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 129 - 194
Target Start/End: Complemental strand, 2424439 - 2424374
Alignment:
Q  129 tttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcg 194  Q
    ||||| ||||||||||||||||||||||||||||||||| |||||||||||||  |||||||||||    
T  2424439 tttcaaaattatacaacttagaattagagaaagttagtctcacccttaccttaggttagatgatcg 2424374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 129 - 182
Target Start/End: Complemental strand, 35811428 - 35811375
Alignment:
Q  129 tttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaa 182  Q
    ||||| |||||||| |||||||||||||||||||||||||||||||||||||||    
T  35811428 tttcaaaattataccacttagaattagagaaagttagtcccacccttaccttaa 35811375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 151 - 220
Target Start/End: Original strand, 10273405 - 10273476
Alignment:
Q  151 attagagaaagttagtcccacccttaccttaaattagatga--tcggactctacaagattgctcctcttctc 220  Q
    ||||||||||| ||||||||||||||||||| |||||| ||  || ||||||||||| ||||||||||||||    
T  10273405 attagagaaagctagtcccacccttaccttagattagacgatttcagactctacaagcttgctcctcttctc 10273476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 125 - 181
Target Start/End: Original strand, 14186955 - 14187010
Alignment:
Q  125 tcaatttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 181  Q
    ||||||||||||| ||||| |||||||||||||||||||| ||||||||||||||||    
T  14186955 tcaatttcagaatcataca-cttagaattagagaaagttactcccacccttacctta 14187010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 129 - 181
Target Start/End: Original strand, 15008963 - 15009015
Alignment:
Q  129 tttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 181  Q
    ||||||||||| |  ||||||||||||||||||||||||||||||||||||||    
T  15008963 tttcagaattaaaatacttagaattagagaaagttagtcccacccttacctta 15009015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 82 - 181
Target Start/End: Original strand, 21062593 - 21062693
Alignment:
Q  82 taattcccaaattcccataactacaacctacaacatgctaaactcaattt-cagaattatacaacttagaattagagaaagttagtcccacccttacctt 180  Q
    |||||| ||||| | || ||||||||||||| || || ||||  |||||| || | |||||  |||||||||||||||||||||||||||||||||||||    
T  21062593 taattctcaaatcctcaaaactacaacctaccacttgttaaatccaattttcatagttataacacttagaattagagaaagttagtcccacccttacctt 21062692  T
Q  181 a 181  Q
    |    
T  21062693 a 21062693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 151 - 208
Target Start/End: Complemental strand, 33243324 - 33243267
Alignment:
Q  151 attagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagatt 208  Q
    |||| |||| ||||||| ||||||||||||| |||||||||| |||||||||||||||    
T  33243324 attaaagaatgttagtctcacccttaccttagattagatgatgggactctacaagatt 33243267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 129 - 181
Target Start/End: Original strand, 16296938 - 16296990
Alignment:
Q  129 tttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 181  Q
    |||||||||||||||||| |  ||||||||||| |||||||||||||||||||    
T  16296938 tttcagaattatacaactcattattagagaaagctagtcccacccttacctta 16296990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 129 - 181
Target Start/End: Original strand, 40620532 - 40620584
Alignment:
Q  129 tttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 181  Q
    ||||||||||| |  ||||||||||||||||||||| ||||||||||||||||    
T  40620532 tttcagaattaaaatacttagaattagagaaagttattcccacccttacctta 40620584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 151 - 220
Target Start/End: Original strand, 55583218 - 55583289
Alignment:
Q  151 attagagaaagttagtcccacccttaccttaaattagatga--tcggactctacaagattgctcctcttctc 220  Q
    ||||||||||| ||||||||||||||||||| ||  | |||  |||||||||||||| ||||||||||||||    
T  55583218 attagagaaagctagtcccacccttaccttagataggttgaattcggactctacaagtttgctcctcttctc 55583289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 151 - 220
Target Start/End: Original strand, 13165154 - 13165225
Alignment:
Q  151 attagagaaagttagtcccacccttaccttaaattagatga--tcggactctacaagattgctcctcttctc 220  Q
    |||| |||| ||||||||||||||||||||| ||| | |||  | |||||||||||| ||||||||||||||    
T  13165154 attaaagaaggttagtcccacccttaccttagattggttgaatttggactctacaagtttgctcctcttctc 13165225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 161 - 196
Target Start/End: Original strand, 26014316 - 26014351
Alignment:
Q  161 gttagtcccacccttaccttaaattagatgatcgga 196  Q
    ||||||||||||||||||||| ||||||||||||||    
T  26014316 gttagtcccacccttaccttagattagatgatcgga 26014351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 91
Target Start/End: Original strand, 27028642 - 27028708
Alignment:
Q  26 tacacaaattcaacggattttctactctattaacaaccaattacaact-tcaaaacctaattcccaa 91  Q
    ||||||||||| | |||||||||| || ||||||||| |||| ||| | ||||||||||||||||||    
T  27028642 tacacaaattctatggattttctattcaattaacaactaattgcaattctcaaaacctaattcccaa 27028708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 181
Target Start/End: Complemental strand, 32466244 - 32466194
Alignment:
Q  131 tcagaattatacaacttagaattagagaaagttagtcccacccttacctta 181  Q
    ||||||||| |||||||||||||| ||||  |||||| |||||||||||||    
T  32466244 tcagaattacacaacttagaattaaagaagattagtctcacccttacctta 32466194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 59 - 92
Target Start/End: Original strand, 9638939 - 9638972
Alignment:
Q  59 caaccaattacaacttcaaaacctaattcccaaa 92  Q
    ||||||||||||||||| ||||||||||||||||    
T  9638939 caaccaattacaacttctaaacctaattcccaaa 9638972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 144 - 181
Target Start/End: Original strand, 14186067 - 14186104
Alignment:
Q  144 acttagaattagagaaagttagtcccacccttacctta 181  Q
    ||||||||||| ||||||||| ||||||||||||||||    
T  14186067 acttagaattaaagaaagttactcccacccttacctta 14186104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 129 - 194
Target Start/End: Original strand, 26446207 - 26446272
Alignment:
Q  129 tttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcg 194  Q
    |||||||||||||||||  |  ||||||||||| |||||| |||||||| |||  |||||||||||    
T  26446207 tttcagaattatacaacccattattagagaaagctagtcctacccttactttaggttagatgatcg 26446272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 181
Target Start/End: Original strand, 14631135 - 14631187
Alignment:
Q  129 tttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 181  Q
    |||||||||||||||||  |  ||||||||||| ||||| |||||||||||||    
T  14631135 tttcagaattatacaacccattattagagaaagctagtctcacccttacctta 14631187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 222; Significance: 1e-122; HSPs: 46)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 16 - 241
Target Start/End: Original strand, 19676598 - 19676823
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  19676598 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaacctacaac 19676697  T
Q  116 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagattgctcctc 215  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19676698 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagattgctcctc 19676797  T
Q  216 ttctcacaagattcttctcttctctg 241  Q
    ||||||||||||||||||||||||||    
T  19676798 ttctcacaagattcttctcttctctg 19676823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 16 - 238
Target Start/End: Complemental strand, 21046214 - 21045992
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  21046214 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacttaattcccaaattcccataactacaacctacaac 21046115  T
Q  116 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagattgctcctc 215  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  21046114 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagattgcacctc 21046015  T
Q  216 ttctcacaagattcttctcttct 238  Q
    |||||||||||||||||||||||    
T  21046014 ttctcacaagattcttctcttct 21045992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 16 - 241
Target Start/End: Complemental strand, 20633799 - 20633571
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataa---ctacaacctac 112  Q
    ||||||||||||||||||||||||  ||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||   ||| |||||||    
T  20633799 acatcaattctacacaaattcaacttattttttattctattaacaaccaattacaacttcaaaacctaattcccaaattcccataataactataacctac 20633700  T
Q  113 aacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagattgctc 212  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  20633699 aacatgctaaactcaatttcagaattatacaacttagaattagagcaagttagtcccacccttatcttaaattagatgatcggactctacaagattgctc 20633600  T
Q  213 ctcttctcacaagattcttctcttctctg 241  Q
     ||||||||||||||||||||||||||||    
T  20633599 atcttctcacaagattcttctcttctctg 20633571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 16 - 208
Target Start/End: Complemental strand, 16058478 - 16058287
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||    
T  16058478 acatcacttctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaa-cctaattcccaaatttccataactacaacctacaac 16058380  T
Q  116 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagatt 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||    
T  16058379 atgctaaactcaatttcagaattatacaacttagaattagagaaatttagtcccacccttaccttagattagatgatcggactctacaagatt 16058287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 16 - 181
Target Start/End: Original strand, 42912936 - 42913101
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  42912936 acatcaattctacacaaattcaacagattttctactctattaacaaccaattacaacttcaaaacctaattcctaaattcccacaactacaacctacaac 42913035  T
Q  116 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 181  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  42913036 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtctcacccttacctta 42913101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 21 - 181
Target Start/End: Original strand, 51324396 - 51324556
Alignment:
Q  21 aattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacatgct 120  Q
    |||||||||| |||||||  ||||||||||| |   ||||||||||||||||||  ||||||||||||||| |||||| ||||||||||||| || || |    
T  51324396 aattctacaccaattcaatagattttctactattaaaacaaccaattacaacttttaaacctaattcccaatttcccaaaactacaacctaccacctgtt 51324495  T
Q  121 aaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 181  Q
    |||  || ||||||||| ||||||||||||||||| ||||||||||| |||||||||||||    
T  51324496 aaatccagtttcagaatcatacaacttagaattagggaaagttagtctcacccttacctta 51324556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 57 - 181
Target Start/End: Complemental strand, 24723475 - 24723351
Alignment:
Q  57 aacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacatgctaaactcaatttcagaattatacaacttagaattaga 156  Q
    ||||||||||||||||||| |||| |||||| |||||| ||| |||||||| |||| || || |||| ||| ||||||||| ||||||||||||||||||    
T  24723475 aacaaccaattacaacttctaaacataattctcaaatttccaaaactacaatctaccacctgttaaattcagtttcagaatcatacaacttagaattaga 24723376  T
Q  157 gaaagttagtcccacccttacctta 181  Q
    |||||||||||||||||||||||||    
T  24723375 gaaagttagtcccacccttacctta 24723351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 129 - 241
Target Start/End: Complemental strand, 28476786 - 28476674
Alignment:
Q  129 tttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagattgctcctcttctcacaagatt 228  Q
    |||||||||||||||||| |  ||||||||||  ||||||||||||||||||| ||||||||| |||||||| |||||||||||||||||||||||||||    
T  28476786 tttcagaattatacaactcattattagagaaatctagtcccacccttaccttagattagatgaccggactctgcaagattgctcctcttctcacaagatt 28476687  T
Q  229 cttctcttctctg 241  Q
    |||| ||||||||    
T  28476686 cttcccttctctg 28476674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 151 - 241
Target Start/End: Complemental strand, 41225484 - 41225394
Alignment:
Q  151 attagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagattgctcctcttctcacaagattcttctcttctctg 241  Q
    |||| |||| |||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||    
T  41225484 attaaagaaggttagtcccacccttaccttaaattagatgatcgtactcgacaagattgctcctcttctcacaagattcttctcttctctg 41225394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 151 - 241
Target Start/End: Complemental strand, 41226737 - 41226647
Alignment:
Q  151 attagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagattgctcctcttctcacaagattcttctcttctctg 241  Q
    |||| |||| |||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||    
T  41226737 attaaagaaggttagtcccacccttaccttaaattagatgatcgtactcgacaagattgctcctcttctcacaagattcttctcttctctg 41226647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 77 - 181
Target Start/End: Original strand, 13302849 - 13302954
Alignment:
Q  77 aaacctaattcccaaattcccataactacaacctacaacatgctaaactcaattt-cagaattatacaacttagaattagagaaagttagtcccaccctt 175  Q
    |||||||||||||||||||||| |||||||||||||||| || |||| ||||||| ||||||||||| |||||||||||||||||||||||| |||||||    
T  13302849 aaacctaattcccaaattcccaaaactacaacctacaacttgttaaattcaattttcagaattataccacttagaattagagaaagttagtctcaccctt 13302948  T
Q  176 acctta 181  Q
    ||||||    
T  13302949 acctta 13302954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 20 - 181
Target Start/End: Original strand, 21168825 - 21168985
Alignment:
Q  20 caattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacatgc 119  Q
    ||||| ||||||||||||| ||||||||||||||||||| ||| ||  || | |||||||||| |||||||||||| || |   |||| | |||||||||    
T  21168825 caattgtacacaaattcaatggattttctactctattaaaaacaaaa-actaattcaaaaccttattcccaaattcacaaattcacaaacaacaacatgc 21168923  T
Q  120 taaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 181  Q
    |||||||||||| ||||||||||||| || ||||||||||||||| | ||||||||||||||    
T  21168924 taaactcaattttagaattatacaacctaaaattagagaaagttaattccacccttacctta 21168985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 129 - 241
Target Start/End: Original strand, 12710867 - 12710979
Alignment:
Q  129 tttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagattgctcctcttctcacaagatt 228  Q
    |||||||||||||||||  |  ||||||||||| |||||||| | |||||||| |||||||||| |||||||||||||||||||||||||||| ||||||    
T  12710867 tttcagaattatacaacccaatattagagaaagctagtcccatctttaccttagattagatgatgggactctacaagattgctcctcttctcataagatt 12710966  T
Q  229 cttctcttctctg 241  Q
    |||||||||||||    
T  12710967 cttctcttctctg 12710979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 59 - 238
Target Start/End: Original strand, 22350646 - 22350820
Alignment:
Q  59 caaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacatgctaaactcaa-tttcagaattatacaacttagaattagag 157  Q
    |||||| || ||||||| || ||||||||||||||||||| |||||||||||||||| || |||| |||| ||||||||| |||  ||| |||||||  |    
T  22350646 caaccatttgcaacttctaaccctaattcccaaattcccaaaactacaacctacaacttgttaaattcaattttcagaatcata-tactcagaattattg 22350744  T
Q  158 aaagttagtcccacccttaccttaaattagatgatcggactctacaagattgctcctcttctcacaagattcttctcttct 238  Q
    || ||||||||||||||||||||| ||    ||||||||||||||||||||||||||| ||||| ||||||||||| ||||    
T  22350745 aaggttagtcccacccttaccttagat----tgatcggactctacaagattgctcctc-tctcataagattcttcttttct 22350820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 57 - 181
Target Start/End: Complemental strand, 7052046 - 7051922
Alignment:
Q  57 aacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacatgctaaactcaatttcagaattatacaacttagaattaga 156  Q
    ||||||||||||||| ||| |||||||||||||||||| | | ||||| || |||| || || ||||  || ||||||||| ||||||||||||||||||    
T  7052046 aacaaccaattacaatttctaaacctaattcccaaatttctaaaactaaaatctaccacctgttaaatccagtttcagaatcatacaacttagaattaga 7051947  T
Q  157 gaaagttagtcccacccttacctta 181  Q
    |||||||||||||||||||||||||    
T  7051946 gaaagttagtcccacccttacctta 7051922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 151 - 239
Target Start/End: Original strand, 20588660 - 20588748
Alignment:
Q  151 attagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagattgctcctcttctcacaagattcttctcttctc 239  Q
    ||||||||||| || |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  20588660 attagagaaagctaatcccacccttaccttaaattggatgatcggactctacaagattgctcctcttctcacagtattcttctcttctc 20588748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 151 - 239
Target Start/End: Original strand, 20593198 - 20593286
Alignment:
Q  151 attagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagattgctcctcttctcacaagattcttctcttctc 239  Q
    ||||||||||| || |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  20593198 attagagaaagctaatcccacccttaccttaaattggatgatcggactctacaagattgctcctcttctcacagtattcttctcttctc 20593286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 59 - 181
Target Start/End: Complemental strand, 7320716 - 7320594
Alignment:
Q  59 caaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacatgctaaactcaa-tttcagaattatacaacttagaattagag 157  Q
    |||||||||||||| || |||| ||||||||||||||||| |||||||| ||||||| || |||| |||| ||||||||| |||| |||||||||||| |    
T  7320716 caaccaattacaacatctaaacataattcccaaattcccaaaactacaatctacaacctgttaaattcaattttcagaataatac-acttagaattagtg 7320618  T
Q  158 aaagttagtcccacccttacctta 181  Q
     | |||||||||||||||||||||    
T  7320617 taggttagtcccacccttacctta 7320594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 78 - 181
Target Start/End: Original strand, 42697732 - 42697836
Alignment:
Q  78 aacctaattcccaaattcccataactacaacctacaacatgctaaactcaatt-tcagaattatacaacttagaattagagaaagttagtcccaccctta 176  Q
    |||||||||| ||||| | || ||||||||||||||||||| ||||  ||||| |||||||||||||||||||||||| |||| ||||||| ||||||||    
T  42697732 aacctaattctcaaatcctcaaaactacaacctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtctcaccctta 42697831  T
Q  177 cctta 181  Q
    |||||    
T  42697832 cctta 42697836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 32 - 181
Target Start/End: Complemental strand, 4595995 - 4595853
Alignment:
Q  32 aattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacatgctaaactcaattt 131  Q
    |||||| |||||| ||||||||   | ||||||||||||||||| ||| ||||||||||||        ||||||||||||||| || |||| || ||||    
T  4595995 aattcatcggattatctactcttaaatcaaccaattacaacttctaaatctaattcccaaa--------actacaacctacaacttgttaaattcgattt 4595904  T
Q  132 -cagaattatacaacttagaattagagaaagttagtcccacccttacctta 181  Q
     |||||||||||  ||||||||||||||||||||||| |||||||||||||    
T  4595903 tcagaattatacctcttagaattagagaaagttagtctcacccttacctta 4595853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 111 - 220
Target Start/End: Original strand, 8306588 - 8306697
Alignment:
Q  111 acaacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagattgc 210  Q
    |||||||| ||||| |  ||| |||||||||||||  |  ||||||||||| ||||||||| ||||||||| ||||||||||||| |||||| |||||||    
T  8306588 acaacatgttaaacccctttttagaattatacaacccattattagagaaagctagtcccactcttaccttagattagatgatcggtctctacgagattgc 8306687  T
Q  211 tcctcttctc 220  Q
    ||||||||||    
T  8306688 tcctcttctc 8306697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 100 - 181
Target Start/End: Complemental strand, 21239130 - 21239049
Alignment:
Q  100 aactacaacctacaacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 181  Q
    ||||||||||||| || || ||||  || ||||||||| ||||||||||||||||||||||||||||||||||| |||||||    
T  21239130 aactacaacctaccacctgttaaatccagtttcagaatcatacaacttagaattagagaaagttagtcccacccatacctta 21239049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 129 - 181
Target Start/End: Original strand, 51336479 - 51336531
Alignment:
Q  129 tttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 181  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  51336479 tttcagaatcatacaacttagaattagagaaagttagtcccacccttacctta 51336531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 57 - 182
Target Start/End: Complemental strand, 44822145 - 44822020
Alignment:
Q  57 aacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacatgctaaactcaa-tttcagaattatacaacttagaattag 155  Q
    ||||||||||||||||||| |||||||||||||||||| ||| ||||||||||||| || || ||||  ||| ||||| ||| ||| || | |||||||     
T  44822145 aacaaccaattacaacttctaaacctaattcccaaatttccagaactacaacctaccacctgttaaatccaattttcataatcatataa-tcagaattat 44822047  T
Q  156 agaaagttagtcccacccttaccttaa 182  Q
     ||| ||||||||||| ||||||||||    
T  44822046 tgaaggttagtcccactcttaccttaa 44822020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 129 - 181
Target Start/End: Complemental strand, 12327795 - 12327743
Alignment:
Q  129 tttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 181  Q
    ||||||||| ||||||||||||||||||||||||||||| |||||||||||||    
T  12327795 tttcagaatcatacaacttagaattagagaaagttagtctcacccttacctta 12327743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 111 - 184
Target Start/End: Original strand, 45499374 - 45499446
Alignment:
Q  111 acaacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaat 184  Q
    |||| |||||||||||||||||||||||||||||| || ||||||||| ||||| | |||||||||| ||||||    
T  45499374 acaatatgctaaactcaatttcagaattatacaacctaaaattagagagagttaat-ccacccttacgttaaat 45499446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 129 - 181
Target Start/End: Complemental strand, 29763684 - 29763632
Alignment:
Q  129 tttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 181  Q
    ||||||||||| |  ||||||||||||||||||||||||||||||||||||||    
T  29763684 tttcagaattaaaatacttagaattagagaaagttagtcccacccttacctta 29763632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 78 - 181
Target Start/End: Original strand, 45755468 - 45755572
Alignment:
Q  78 aacctaattcccaaattcccataactacaacctacaacatgctaaactcaattt-cagaattatacaacttagaattagagaaagttagtcccaccctta 176  Q
    |||||||||| ||||||| || |||||||||||||||| || ||||  || ||| |||||| ||| |||||| ||||| |||| ||||||| ||||||||    
T  45755468 aacctaattctcaaattctcaaaactacaacctacaacttgttaaatccacttttcagaatcatataacttataattaaagaaggttagtctcaccctta 45755567  T
Q  177 cctta 181  Q
    |||||    
T  45755568 cctta 45755572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 129 - 181
Target Start/End: Complemental strand, 46197797 - 46197745
Alignment:
Q  129 tttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 181  Q
    ||||||||||| |  ||||||||||||||||||||||||||||||||||||||    
T  46197797 tttcagaattaaattacttagaattagagaaagttagtcccacccttacctta 46197745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 129 - 220
Target Start/End: Complemental strand, 17901846 - 17901754
Alignment:
Q  129 tttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgat--cggactctacaagattgctcctcttctc 220  Q
    |||||||||||||||||  |  ||||||||||| ||||| ||||||||||||| | ||||||||  ||||||||| ||| ||||||||||||||    
T  17901846 tttcagaattatacaacccattattagagaaagctagtctcacccttaccttagaatagatgattccggactcta-aagcttgctcctcttctc 17901754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 129 - 181
Target Start/End: Original strand, 50001476 - 50001528
Alignment:
Q  129 tttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 181  Q
    ||||||||||| |  ||||||||||| ||||||||||||||||||||||||||    
T  50001476 tttcagaattaaaatacttagaattaaagaaagttagtcccacccttacctta 50001528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 129 - 220
Target Start/End: Original strand, 6834176 - 6834268
Alignment:
Q  129 tttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgat--cggactctacaagattgctcctcttctc 220  Q
    |||||||||||||||||| |  ||||||||||| ||||  ||||||| ||||| | ||||||||  ||||||||| ||| ||||||||||||||    
T  6834176 tttcagaattatacaactcattattagagaaagctagtatcacccttgccttagaatagatgattccggactcta-aagcttgctcctcttctc 6834268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 129 - 182
Target Start/End: Complemental strand, 22145718 - 22145665
Alignment:
Q  129 tttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaa 182  Q
    ||||||||||| |||||  |  ||||||||||||||||||||||||||||||||    
T  22145718 tttcagaattaaacaacccattattagagaaagttagtcccacccttaccttaa 22145665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 151 - 220
Target Start/End: Original strand, 45499564 - 45499634
Alignment:
Q  151 attagagaaagttagtcccacccttaccttaaattagatgat--cggactctacaagattgctcctcttctc 220  Q
    ||||||||||| ||||| ||||||||||||| |||| |||||  ||||||||| ||| ||||||||||||||    
T  45499564 attagagaaagctagtctcacccttaccttagattatatgattccggactcta-aagcttgctcctcttctc 45499634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 141
Target Start/End: Original strand, 11946391 - 11946453
Alignment:
Q  80 cctaattcccaaattcc-cataactacaacctacaacatgctaaactcaatttcagaattata 141  Q
    ||||||||||||| ||| || ||||| ||||||||||||| ||||  ||||||||||||||||    
T  11946391 cctaattcccaaaatcctcaaaactataacctacaacatgttaaatccaatttcagaattata 11946453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 220
Target Start/End: Original strand, 35895099 - 35895192
Alignment:
Q  129 tttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgat--cggactctacaagattgctcctcttctc 220  Q
    ||||||||| |||||||  |  |||||| |||| |||||| |||| ||||||| ||||||||||  |  |||||||||| ||||||||||||||    
T  35895099 tttcagaatcatacaacccattattagataaagctagtcctacccataccttagattagatgatttcaaactctacaagcttgctcctcttctc 35895192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 59 - 92
Target Start/End: Complemental strand, 8276112 - 8276079
Alignment:
Q  59 caaccaattacaacttcaaaacctaattcccaaa 92  Q
    ||||||||||||||||| ||||||||||||||||    
T  8276112 caaccaattacaacttctaaacctaattcccaaa 8276079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 129 - 186
Target Start/End: Complemental strand, 38056724 - 38056667
Alignment:
Q  129 tttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaatta 186  Q
    |||||||||||||||||  |  | ||||||||| ||||||||||||||||||| ||||    
T  38056724 tttcagaattatacaacccattactagagaaagctagtcccacccttaccttagatta 38056667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 59 - 92
Target Start/End: Complemental strand, 38056795 - 38056762
Alignment:
Q  59 caaccaattacaacttcaaaacctaattcccaaa 92  Q
    ||||||||||||||||| ||||||||||||||||    
T  38056795 caaccaattacaacttctaaacctaattcccaaa 38056762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 181
Target Start/End: Complemental strand, 635052 - 635004
Alignment:
Q  133 agaattatacaacttagaattagagaaagttagtcccacccttacctta 181  Q
    ||||||||||||| ||  ||||||||||| ||||| |||||||||||||    
T  635052 agaattatacaacctattattagagaaagctagtctcacccttacctta 635004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 123
Target Start/End: Original strand, 14801337 - 14801384
Alignment:
Q  76 aaaacctaatt-cccaaattcccataactacaacctacaacatgctaaa 123  Q
    ||||||||||| |||||||||||| ||||| ||||||||||||||||||    
T  14801337 aaaacctaatttcccaaattcccaaaacta-aacctacaacatgctaaa 14801384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 123
Target Start/End: Original strand, 14810211 - 14810258
Alignment:
Q  76 aaaacctaatt-cccaaattcccataactacaacctacaacatgctaaa 123  Q
    ||||||||||| |||||||||||| ||||| ||||||||||||||||||    
T  14810211 aaaacctaatttcccaaattcccaaaacta-aacctacaacatgctaaa 14810258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 185
Target Start/End: Original strand, 16401897 - 16401967
Alignment:
Q  113 aacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaatt 185  Q
    |||||| ||||| | |||||||||||||| |||  |  ||||||||| |||||||||||||||||||||||||    
T  16401897 aacatgttaaaccctatttcagaattata-aacccattattagagaa-gttagtcccacccttaccttaaatt 16401967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 181
Target Start/End: Original strand, 24727383 - 24727419
Alignment:
Q  145 cttagaattagagaaagttagtcccacccttacctta 181  Q
    |||||||||| |||| |||||||||||||||||||||    
T  24727383 cttagaattaaagaaggttagtcccacccttacctta 24727419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 212
Target Start/End: Original strand, 34392790 - 34392853
Alignment:
Q  151 attagagaaagttagtcccacccttaccttaaattagatga--tcggactctacaagattgctc 212  Q
    ||||||||||| ||||| ||||||||||||| ||| | |||  | |||||||||||||||||||    
T  34392790 attagagaaagctagtcacacccttaccttagattggttgaatttggactctacaagattgctc 34392853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 181
Target Start/End: Original strand, 50544872 - 50544924
Alignment:
Q  129 tttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 181  Q
    |||||||||||||||||  |  ||||||||||| ||||| |||||||||||||    
T  50544872 tttcagaattatacaacccattattagagaaagctagtctcacccttacctta 50544924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0737 (Bit Score: 214; Significance: 1e-117; HSPs: 2)
Name: scaffold0737
Description:

Target: scaffold0737; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 16 - 241
Target Start/End: Complemental strand, 4879 - 4654
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  4879 acatcacttctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacgacctacaac 4780  T
Q  116 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagattgctcctc 215  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  4779 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtccgacccttaccttaaattagatgatcggactctacaagattgctcctc 4680  T
Q  216 ttctcacaagattcttctcttctctg 241  Q
    ||||||||||||||||||||||||||    
T  4679 ttctcacaagattcttctcttctctg 4654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0737; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 59 - 177
Target Start/End: Complemental strand, 5941 - 5821
Alignment:
Q  59 caaccaattacaacttcaaaacctaattc-ccaaattcccataactacaacctacaacatgctaaactcaattt-cagaattatacaacttagaattaga 156  Q
    ||||||||| ||||||| || |||||||  ||||||||  | |||||||||| ||||| ||  |||  |||||| |||||||| ||||||||||||||      
T  5941 caaccaatttcaacttctaaccctaattttccaaattctgaaaactacaacccacaacctgtcaaatccaattttcagaattacacaacttagaattaag 5842  T
Q  157 gaaagttagtcccacccttac 177  Q
    ||||||||||| ||| |||||    
T  5841 gaaagttagtctcacacttac 5821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 211; Significance: 1e-116; HSPs: 46)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 16 - 238
Target Start/End: Complemental strand, 24781005 - 24780783
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |    
T  24781005 acatcacttctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacttc 24780906  T
Q  116 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagattgctcctc 215  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24780905 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagattgctcctc 24780806  T
Q  216 ttctcacaagattcttctcttct 238  Q
    |||||||||||||||||||||||    
T  24780805 ttctcacaagattcttctcttct 24780783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 16 - 241
Target Start/End: Original strand, 24436535 - 24436760
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  24436535 acatcaattctacacaaattcaacggattttctactctattaacaactaattacaacttcaaaacctaatttccaaattcccataactacaacctacaac 24436634  T
Q  116 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagattgctcctc 215  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  24436635 atgctaaactcaatttcagaattatacaacttagaattcgagaaagttagtcccacccttatcttaaattagatgatcggactctacaagattgctcctc 24436734  T
Q  216 ttctcacaagattcttctcttctctg 241  Q
    ||||||||||||||||||||||||||    
T  24436735 ttctcacaagattcttctcttctctg 24436760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 13 - 238
Target Start/End: Complemental strand, 5031297 - 5031072
Alignment:
Q  13 tggacatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctac 112  Q
    ||||||||| |||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5031297 tggacatcacttctacacaaattcaacgaattttatactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctac 5031198  T
Q  113 aacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagattgctc 212  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  5031197 aacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgattggactctacaagattgctc 5031098  T
Q  213 ctcttctcacaagattcttctcttct 238  Q
     |||||||||||||||||||||||||    
T  5031097 atcttctcacaagattcttctcttct 5031072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 16 - 241
Target Start/End: Original strand, 9975816 - 9976041
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9975816 acatcaattctacacaaattcagcggattgtctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 9975915  T
Q  116 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagattgctcctc 215  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||    
T  9975916 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtccaacccttaccttaaattagatgatcggactctacaagattgttcctc 9976015  T
Q  216 ttctcacaagattcttctcttctctg 241  Q
    |||||| |||||||||||||||||||    
T  9976016 ttctcataagattcttctcttctctg 9976041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 29 - 241
Target Start/End: Complemental strand, 22251600 - 22251388
Alignment:
Q  29 acaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacatgctaaactcaa 128  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22251600 acaaattcaacagattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacatgctaaactcaa 22251501  T
Q  129 tttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagattgctcctcttctcacaagatt 228  Q
    |||||||||||||||||||||||||||||||| |||||  ||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||    
T  22251500 tttcagaattatacaacttagaattagagaaaattagtttcacccttaccttaaattagatgatcagactctacaagattactcctcttctcacaagatt 22251401  T
Q  229 cttctcttctctg 241  Q
    |||||||||||||    
T  22251400 cttctcttctctg 22251388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 181; E-Value: 7e-98
Query Start/End: Original strand, 16 - 220
Target Start/End: Original strand, 17307373 - 17307577
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17307373 acatcaattctacacaaattcaacgaattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 17307472  T
Q  116 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagattgctcctc 215  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||| |  |||||||||    
T  17307473 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttagattagatgatcggtctctacgattttgctcctc 17307572  T
Q  216 ttctc 220  Q
    |||||    
T  17307573 ttctc 17307577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 16 - 241
Target Start/End: Complemental strand, 2523912 - 2523687
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    ||||||||||| ||||||||||||| ||||||||||||||||| |||||||||||| || ||||||||||| |||||||||||||| |||||||||||||    
T  2523912 acatcaattctgcacaaattcaacgaattttctactctattaataaccaattacaatttaaaaacctaatttccaaattcccataaatacaacctacaac 2523813  T
Q  116 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagattgctcctc 215  Q
    ||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  2523812 atgttaaactcaatttaagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcggactttacaagattgctcctc 2523713  T
Q  216 ttctcacaagattcttctcttctctg 241  Q
    ||||||||||||| ||||||| ||||    
T  2523712 ttctcacaagatttttctcttttctg 2523687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 16 - 181
Target Start/End: Original strand, 24516073 - 24516238
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24516073 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 24516172  T
Q  116 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 181  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24516173 atgttaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 24516238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 154; E-Value: 9e-82
Query Start/End: Original strand, 16 - 181
Target Start/End: Original strand, 40912207 - 40912372
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    |||||| |||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  40912207 acatcatttctacacaaattcaacgaattttctactctattaacaaccaactacaacttcaaaacctaattcccaaattcccataactacaacctacaac 40912306  T
Q  116 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 181  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40912307 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 40912372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 16 - 194
Target Start/End: Complemental strand, 19201365 - 19201187
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    ||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  19201365 acatcaattctacccaaattcaacagattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcctataactacaacctacaac 19201266  T
Q  116 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcg 194  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||  |||||||||||    
T  19201265 atgataaactcaatttcagaattatacaacttagaattagagaaagttagtctcacccttaacttaggttagatgatcg 19201187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 16 - 177
Target Start/End: Original strand, 37270587 - 37270747
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    |||||| |||||| |||||||||||||||||||||||||||||||||| |||||||||||||||| |||||| ||||||| |||||||||||||||||||    
T  37270587 acatcacttctac-caaattcaacggattttctactctattaacaacccattacaacttcaaaacttaattctcaaattctcataactacaacctacaac 37270685  T
Q  116 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttac 177  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  37270686 atgctaaactcaatttcagaattatacaacgtagaattagagaaagttagtcccacccttac 37270747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 16 - 144
Target Start/End: Complemental strand, 27484642 - 27484514
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  27484642 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacttaattcccaaattcccataactacaacctacaac 27484543  T
Q  116 atgctaaactcaatttcagaattatacaa 144  Q
    |||||||||||||||||||||||||||||    
T  27484542 atgctaaactcaatttcagaattatacaa 27484514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 67 - 241
Target Start/End: Original strand, 27852605 - 27852776
Alignment:
Q  67 tacaacttcaaaacctaattcccaaattcccataactacaacctacaacatgctaaactcaattt-cagaattatacaacttagaattagagaaagttag 165  Q
    ||||||||| ||| |||||||||||||||||| ||| |||||||||||| || |||| ||||||| ||||||||||| ||||||||||||||||||||||    
T  27852605 tacaacttctaaatctaattcccaaattcccaaaacaacaacctacaacttgttaaattcaattttcagaattataccacttagaattagagaaagttag 27852704  T
Q  166 tcccacccttaccttaaattagatgatcggactctacaagattgctcctcttctcacaagattcttctcttctctg 241  Q
    |||||||||||||||| ||    |||||||||||||||||| |||||||||| |||||||||||||||||||||||    
T  27852705 tcccacccttaccttagat----tgatcggactctacaagaatgctcctcttttcacaagattcttctcttctctg 27852776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 16 - 133
Target Start/End: Original strand, 36841151 - 36841268
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||    
T  36841151 acatcaattctacacaaattcaacatattttctactctattaacaaccaattacaacttcaaaacctaatttctaaattcccataactacaacctacaac 36841250  T
Q  116 atgctaaactcaatttca 133  Q
    ||| ||||||||||||||    
T  36841251 atgttaaactcaatttca 36841268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 59 - 181
Target Start/End: Original strand, 25142133 - 25142256
Alignment:
Q  59 caaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacatgctaaactcaa-tttcagaattatacaacttagaattagag 157  Q
    ||||||||||||||||| |||||||||||||||||||||| |||||||||||||||| || |||| |||| |||||||||||||| ||||||||||||||    
T  25142133 caaccaattacaacttctaaacctaattcccaaattcccaaaactacaacctacaacttgttaaattcaattttcagaattataccacttagaattagag 25142232  T
Q  158 aaagttagtcccacccttacctta 181  Q
    ||||||||||||||||||||||||    
T  25142233 aaagttagtcccacccttacctta 25142256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 57 - 208
Target Start/End: Original strand, 22501897 - 22502050
Alignment:
Q  57 aacaaccaattacaacttcaaaacctaatt-cccaaattcccataactacaacctacaacatgctaaactcaatt-tcagaattatacaacttagaatta 154  Q
    |||||||||| |||||||| || ||||||| |||||||||  | |||||||||| |||||||| ||||  ||||| ||||||||| |  |||||||||||    
T  22501897 aacaaccaatcacaacttctaaccctaatttcccaaattcataaaactacaacccacaacatgttaaatccaattctcagaattaaattacttagaatta 22501996  T
Q  155 gagaaagttagtcccacccttaccttaaattagatgatcggactctacaagatt 208  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  22501997 gagaaagttagtcccacccttaccttagattagatgatcggactctacaagatt 22502050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 57 - 208
Target Start/End: Original strand, 22509831 - 22509984
Alignment:
Q  57 aacaaccaattacaacttcaaaacctaatt-cccaaattcccataactacaacctacaacatgctaaactcaatt-tcagaattatacaacttagaatta 154  Q
    |||||||||| |||||||| || ||||||| |||||||||  | |||||||||| |||||||| ||||  ||||| ||||||||| |  |||||||||||    
T  22509831 aacaaccaatcacaacttctaaccctaatttcccaaattcataaaactacaacccacaacatgttaaatccaattctcagaattaaattacttagaatta 22509930  T
Q  155 gagaaagttagtcccacccttaccttaaattagatgatcggactctacaagatt 208  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  22509931 gagaaagttagtcccacccttaccttagattagatgatcggactctacaagatt 22509984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 57 - 181
Target Start/End: Original strand, 357809 - 357933
Alignment:
Q  57 aacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacatgctaaactcaatttcagaattatacaacttagaattaga 156  Q
    ||||||||||||||||||| |||||||||||||||||| | | ||||||||||||| || || ||||  || ||||||||| ||||||||||||||||||    
T  357809 aacaaccaattacaacttctaaacctaattcccaaatttcaaaaactacaacctaccacctgttaaatccagtttcagaatcatacaacttagaattaga 357908  T
Q  157 gaaagttagtcccacccttacctta 181  Q
    |||||||||||||||||||||||||    
T  357909 gaaagttagtcccacccttacctta 357933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 57 - 179
Target Start/End: Complemental strand, 1383667 - 1383545
Alignment:
Q  57 aacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacatgctaaactcaatttcagaattatacaacttagaattaga 156  Q
    ||||||||||||||||||| |||||||||||||||||| ||| ||||||||||||| || || ||||  || ||||||||| ||||||||||||||||||    
T  1383667 aacaaccaattacaacttctaaacctaattcccaaatttccaaaactacaacctaccacctgttaaatccagtttcagaatgatacaacttagaattaga 1383568  T
Q  157 gaaagttagtcccacccttacct 179  Q
    ||||||||||| |||||||||||    
T  1383567 gaaagttagtctcacccttacct 1383545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 129 - 241
Target Start/End: Original strand, 21369293 - 21369405
Alignment:
Q  129 tttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagattgctcctcttctcacaagatt 228  Q
    |||||||||||||||||  |   |||||||||| | ||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||    
T  21369293 tttcagaattatacaacccattgttagagaaagcttgtcccacccttaccttagattagatgatcggactctacaagattgctcatcttctcacaagatt 21369392  T
Q  229 cttctcttctctg 241  Q
    |||||||||||||    
T  21369393 cttctcttctctg 21369405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 59 - 181
Target Start/End: Original strand, 3539766 - 3539889
Alignment:
Q  59 caaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacatgctaaactcaattt-cagaattatacaacttagaattagag 157  Q
    ||||||||||||||||| ||||||||||| |||||||| | |||||||||||||||| || |||| || |||| ||||||||||| ||||| ||||||||    
T  3539766 caaccaattacaacttctaaacctaattctcaaattccaaaaactacaacctacaacttgttaaattcgattttcagaattataccacttaaaattagag 3539865  T
Q  158 aaagttagtcccacccttacctta 181  Q
    ||||||||||||||||||||||||    
T  3539866 aaagttagtcccacccttacctta 3539889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 169 - 241
Target Start/End: Original strand, 36841267 - 36841339
Alignment:
Q  169 cacccttaccttaaattagatgatcggactctacaagattgctcctcttctcacaagattcttctcttctctg 241  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36841267 cacccttaccttaaattagatgatcggactctacaagattgctcctcttctcacaagattcttctcttctctg 36841339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 151 - 240
Target Start/End: Complemental strand, 14179758 - 14179669
Alignment:
Q  151 attagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagattgctcctcttctcacaagattcttctcttctct 240  Q
    |||| |||| ||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||    
T  14179758 attaaagaaggttagtcccacccttaccttatattagatgatcgaactctacaagattgctcctcttctcacaagattattctcttctct 14179669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 157 - 241
Target Start/End: Original strand, 31521197 - 31521281
Alignment:
Q  157 gaaagttagtcccacccttaccttaaattagatgatcggactctacaagattgctcctcttctcacaagattcttctcttctctg 241  Q
    ||||||||| | |||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  31521197 gaaagttagcctcacccttaccctaaattagatgatcggactgtacaagattgctcctcttctcacaagattcttctcttctctg 31521281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 148 - 241
Target Start/End: Original strand, 20916326 - 20916419
Alignment:
Q  148 agaattagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagattgctcctcttctcacaagattcttctcttctctg 241  Q
    |||||||  ||| |||||| |||||||||| ||||||||||||||||  ||||||||||||||||||||||||| ||||||| |||||||||||    
T  20916326 agaattattgaaggttagttccacccttactttaaattagatgatcgagctctacaagattgctcctcttctcataagattcctctcttctctg 20916419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 151 - 233
Target Start/End: Complemental strand, 14183496 - 14183414
Alignment:
Q  151 attagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagattgctcctcttctcacaagattcttct 233  Q
    |||| |||| |||||||||||||||||||||||||||||||||||| | || ||||||||| | |||||||||||||||||||    
T  14183496 attaaagaaggttagtcccacccttaccttaaattagatgatcggattttataagattgcttcacttctcacaagattcttct 14183414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 81 - 181
Target Start/End: Original strand, 44072509 - 44072609
Alignment:
Q  81 ctaattcccaaattcccataactacaacctacaacatgctaaactcaa-tttcagaattatacaacttagaattagagaaagttagtcccacccttacct 179  Q
    |||||| ||||||||||| |||||||||||||||| ||||||| |||| ||||| ||| |||| |||||||||||| ||||||||||| |||||||||||    
T  44072509 ctaatttccaaattcccaaaactacaacctacaacttgctaaattcaattttcaaaatcatac-acttagaattagtgaaagttagtctcacccttacct 44072607  T
Q  180 ta 181  Q
    ||    
T  44072608 ta 44072609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 78 - 181
Target Start/End: Original strand, 25046066 - 25046170
Alignment:
Q  78 aacctaattcccaaattcccataactacaacctacaacatgctaaactcaatt-tcagaattatacaacttagaattagagaaagttagtcccaccctta 176  Q
    ||||||||||  |||| | || ||||||| ||||||||||| ||||  ||||| |||||||||||||||||||||||| |||| ||||||||||||||||    
T  25046066 aacctaattcttaaatcctcaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccaccctta 25046165  T
Q  177 cctta 181  Q
    |||||    
T  25046166 cctta 25046170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 133 - 208
Target Start/End: Complemental strand, 149549 - 149474
Alignment:
Q  133 agaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagatt 208  Q
    |||||||||||||| |  ||||||||||| |||| |||||||||||||| ||||||||||||||||||||||||||    
T  149549 agaattatacaactcattattagagaaagctagttccacccttaccttagattagatgatcggactctacaagatt 149474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 64 - 181
Target Start/End: Original strand, 22259974 - 22260090
Alignment:
Q  64 aattacaacttcaaaacctaattcccaaattcccataactacaacctacaacatgctaaactcaattt-cagaattatacaacttagaattagagaaagt 162  Q
    |||||||||||| || ||||||||||||||||| | |||||||||||||||| || |||| ||||||| |||||| || || ||||||||||| ||||||    
T  22259974 aattacaacttctaagcctaattcccaaattccta-aactacaacctacaacctgttaaattcaattttcagaatcatgca-cttagaattagtgaaagt 22260071  T
Q  163 tagtcccacccttacctta 181  Q
    ||||| ||| |||||||||    
T  22260072 tagtcacactcttacctta 22260090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 78 - 181
Target Start/End: Original strand, 5986125 - 5986229
Alignment:
Q  78 aacctaattcccaaattcccataactacaacctacaacatgctaaactcaattt-cagaattatacaacttagaattagagaaagttagtcccaccctta 176  Q
    |||||||||| ||||| | || ||||| |||||||||| || ||||  |||||| ||||||||||||||||||||||| |||| ||| ||||||||||||    
T  5986125 aacctaattctcaaatcctcaaaactataacctacaacttgttaaatccaattttcagaattatacaacttagaattaaagaaggttcgtcccaccctta 5986224  T
Q  177 cctta 181  Q
    |||||    
T  5986225 cctta 5986229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 151 - 237
Target Start/End: Original strand, 24718041 - 24718127
Alignment:
Q  151 attagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagattgctcctcttctcacaagattcttctcttc 237  Q
    |||| |||| |||||||||||||||||  ||  |||   ||||| ||||||||||||||||||||||||||||||||||||||||||    
T  24718041 attaaagaatgttagtcccacccttactatatgttaatcgatcgaactctacaagattgctcctcttctcacaagattcttctcttc 24718127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 59 - 181
Target Start/End: Original strand, 19358820 - 19358943
Alignment:
Q  59 caaccaattacaacttcaaaacctaatt-cccaaattcccataactacaacctacaacatgctaaactcaa-tttcagaattatacaacttagaattaga 156  Q
    ||||||||||||||||| || ||||||| |||||||||||| |||||||||| ||||| || |||| |||| ||||||||| |||  ||| |||||||      
T  19358820 caaccaattacaacttctaaccctaatttcccaaattcccaaaactacaacccacaacttgttaaattcaattttcagaatcata-tactcagaattatt 19358918  T
Q  157 gaaagttagtcccacccttacctta 181  Q
     || |||||||||||||||||||||    
T  19358919 aaaggttagtcccacccttacctta 19358943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 69 - 166
Target Start/End: Complemental strand, 18390326 - 18390229
Alignment:
Q  69 caacttcaaaacctaattcccaaattcccataactacaacctacaacatgctaaactcaattt-cagaattatacaacttagaattagagaaagttagt 166  Q
    ||||||| || ||||||||||||||||||| ||||||||| |||| | || |||| || |||| ||||||||||  |||||||||||||||||||||||    
T  18390326 caacttctaatcctaattcccaaattcccaaaactacaacataca-cttgttaaattctattttcagaattatatcacttagaattagagaaagttagt 18390229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 129 - 181
Target Start/End: Complemental strand, 21081021 - 21080969
Alignment:
Q  129 tttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 181  Q
    ||||||||||| |  ||||||||||||||||||||||||||||||||||||||    
T  21081021 tttcagaattaaattacttagaattagagaaagttagtcccacccttacctta 21080969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 58 - 112
Target Start/End: Original strand, 24884399 - 24884453
Alignment:
Q  58 acaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctac 112  Q
    |||||||||||||||||| ||||||||||||||||||  || |||||||||||||    
T  24884399 acaaccaattacaacttctaaacctaattcccaaattttcagaactacaacctac 24884453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 129 - 208
Target Start/End: Complemental strand, 12626478 - 12626399
Alignment:
Q  129 tttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattaga-tgatcggactctacaagatt 208  Q
    ||||||||||||||| ||||  ||||  ||| ||||||||||||||||||||| ||| || ||||||||||||||||||||    
T  12626478 tttcagaattataca-cttatgattaatgaaggttagtcccacccttaccttacatttgaatgatcggactctacaagatt 12626399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 80 - 186
Target Start/End: Original strand, 14694276 - 14694383
Alignment:
Q  80 cctaattcccaaat-tcccataactacaacctacaacatgctaaactcaattt-cagaattatacaacttagaattagagaaagttagtcccacccttac 177  Q
    |||||||| ||||| ||||| |||||||||||||| |||| ||||  |||||| || ||||| |  ||||||||||| |||||||||||| |||||||||    
T  14694276 cctaattctcaaatctccca-aactacaacctacatcatgttaaatccaattttcaaaattaaattacttagaattatagaaagttagtctcacccttac 14694374  T
Q  178 cttaaatta 186  Q
    |||| ||||    
T  14694375 cttagatta 14694383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 129 - 181
Target Start/End: Original strand, 25184189 - 25184241
Alignment:
Q  129 tttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 181  Q
    ||||||||||| |  |||||||||||||||||||||||| |||||||||||||    
T  25184189 tttcagaattaaaatacttagaattagagaaagttagtctcacccttacctta 25184241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 59 - 181
Target Start/End: Complemental strand, 18388312 - 18388190
Alignment:
Q  59 caaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacatgctaaactcaa-tttcagaattatacaacttagaattagag 157  Q
    |||||| || ||||||| || | ||||||||||||||||| |||||||||||||||| || ||||  ||| ||||||||| |||  ||| || ||||  |    
T  18388312 caaccatttgcaacttctaaccataattcccaaattcccaaaactacaacctacaacttgttaaatccaattttcagaatcata-tactcaggattattg 18388214  T
Q  158 aaagttagtcccacccttacctta 181  Q
    || ||||||| |||||||||||||    
T  18388213 aaggttagtctcacccttacctta 18388190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 151 - 219
Target Start/End: Original strand, 23801518 - 23801592
Alignment:
Q  151 attagagaaagttagtcccacccttaccttaaattagatga------tcggactctacaagattgctcctcttct 219  Q
    ||||||||||| ||||||||||||||||||| |||||||||      | |||||||||||| |||||||||||||    
T  23801518 attagagaaagctagtcccacccttaccttagattagatgattgaatttggactctacaagcttgctcctcttct 23801592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 173
Target Start/End: Complemental strand, 18358019 - 18357975
Alignment:
Q  129 tttcagaattatacaacttagaattagagaaagttagtcccaccc 173  Q
    ||||||||||| |  ||||||||||||||||||||||||||||||    
T  18358019 tttcagaattaaaatacttagaattagagaaagttagtcccaccc 18357975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 181
Target Start/End: Complemental strand, 21315528 - 21315476
Alignment:
Q  129 tttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 181  Q
    |||||||||||||||||  |  ||||||||||| |||||||||||||||||||    
T  21315528 tttcagaattatacaacccattattagagaaagctagtcccacccttacctta 21315476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 181
Target Start/End: Complemental strand, 21335318 - 21335266
Alignment:
Q  129 tttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 181  Q
    |||||||||||||||||  |  ||||||||||| |||||||||||||||||||    
T  21335318 tttcagaattatacaacccattattagagaaagctagtcccacccttacctta 21335266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 177
Target Start/End: Original strand, 21915624 - 21915672
Alignment:
Q  129 tttcagaattatacaacttagaattagagaaagttagtcccacccttac 177  Q
    ||||||||||| |  |||||||||||||||||||||||| |||||||||    
T  21915624 tttcagaattaaaatacttagaattagagaaagttagtcacacccttac 21915672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 129 - 190
Target Start/End: Original strand, 23610626 - 23610687
Alignment:
Q  129 tttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatg 190  Q
    ||||| |||||||||||  |  ||||||||||| |||||||||||||||||||  |||||||    
T  23610626 tttcataattatacaacccattattagagaaagctagtcccacccttaccttaggttagatg 23610687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 210; Significance: 1e-115; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 16 - 241
Target Start/End: Original strand, 58633 - 58858
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  58633 acatcaattctatacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattcccataactacaacctacaac 58732  T
Q  116 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagattgctcctc 215  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  58733 atgctaaactcaatttcagaattgtacaacttagaattagagaaagttagtcccacccttaccttaatttagatgatcggactctacaagattgctcctc 58832  T
Q  216 ttctcacaagattcttctcttctctg 241  Q
    ||||||||||||||||||||||||||    
T  58833 ttctcacaagattcttctcttctctg 58858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 210; Significance: 1e-115; HSPs: 66)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 16 - 241
Target Start/End: Original strand, 17044853 - 17045078
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17044853 acatcaattctacacaaattcaacaaattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 17044952  T
Q  116 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagattgctcctc 215  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||    
T  17044953 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagattactcatc 17045052  T
Q  216 ttctcacaagattcttctcttctctg 241  Q
    ||||||||||||||||||||||||||    
T  17045053 ttctcacaagattcttctcttctctg 17045078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 28 - 241
Target Start/End: Complemental strand, 22306736 - 22306523
Alignment:
Q  28 cacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacatgctaaactca 127  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  22306736 cacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcacaaattcccataactacaacctacaacatgctaaactca 22306637  T
Q  128 atttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagattgctcctcttctcacaagat 227  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22306636 atttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagattgctcctcttctcacaagat 22306537  T
Q  228 tcttctcttctctg 241  Q
    ||||||||||||||    
T  22306536 tcttctcttctctg 22306523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 16 - 241
Target Start/End: Original strand, 17047013 - 17047238
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||  ||||||||||||||||||    
T  17047013 acatcaattctacacaaattcaacggattttttactctattaacaaccaattacaacttcaaaacttaattcccaaattcaaataactacaacctacaac 17047112  T
Q  116 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagattgctcctc 215  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  17047113 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagattactcctc 17047212  T
Q  216 ttctcacaagattcttctcttctctg 241  Q
    ||||||||||||||||||||||||||    
T  17047213 ttctcacaagattcttctcttctctg 17047238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 16 - 241
Target Start/End: Original strand, 17693954 - 17694179
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    |||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||| ||||||| |||||| ||||||||||||||||||||    
T  17693954 acatcaattctacacaaattcaacggattttctactctattaacgatcaattacaacttcaaaatctaattcacaaatttccataactacaacctacaac 17694053  T
Q  116 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagattgctcctc 215  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||    
T  17694054 atgctaaactcaattttagaattatacaacttagaattagagaaagttagtctcacccttacattaaattagatgatcggactctacaagattgctcctc 17694153  T
Q  216 ttctcacaagattcttctcttctctg 241  Q
    ||||| ||||||||||||||||||||    
T  17694154 ttctcgcaagattcttctcttctctg 17694179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 16 - 240
Target Start/End: Original strand, 17538993 - 17539217
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||    
T  17538993 acatcaattctacacaaattcaacagattttctactctattaacaaccaattacatcttcaaaacctaatttccaaattcccataactacaacctacaac 17539092  T
Q  116 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagattgctcctc 215  Q
    ||| |||| |||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| ||||||||||| ||||||    
T  17539093 atgataaaatcaatttcagaattatacaacttagaattagataaagttagtctcacccttaccttaaattagatgatcggattctacaagattactcctc 17539192  T
Q  216 ttctcacaagattcttctcttctct 240  Q
    |||||||||||||||||||||||||    
T  17539193 ttctcacaagattcttctcttctct 17539217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 18 - 241
Target Start/End: Complemental strand, 41172534 - 41172311
Alignment:
Q  18 atcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacat 117  Q
    ||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  41172534 atcaattctacacaaattcaacaaattttctactctattaacaaccaattacaacttcaaaacctaattccctaattcccataactacaacctacaacat 41172435  T
Q  118 gctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagattgctcctctt 217  Q
    |||||||||||||||||| |||||||||||| || ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||    
T  41172434 gctaaactcaatttcagagttatacaacttataagtagagaaagttagtcccacccttaccttaaattagatgatcagactctacaagattgctcatctt 41172335  T
Q  218 ctcacaagattcttctcttctctg 241  Q
     |||||||||||||||||||||||    
T  41172334 gtcacaagattcttctcttctctg 41172311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 16 - 241
Target Start/End: Original strand, 35354489 - 35354714
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    |||||||||||||||||||||||||||||||||||||||  ||||| |||||||||||||||||||||||| |||||||||||||||||||||| |||||    
T  35354489 acatcaattctacacaaattcaacggattttctactctaccaacaatcaattacaacttcaaaacctaatttccaaattcccataactacaaccaacaac 35354588  T
Q  116 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagattgctcctc 215  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||| ||||||||||||||| ||||||||||||||||||||||    
T  35354589 atgctaaactcaatttcagaattatacaacttaaaattagagaaagttagtcccacacttagcttaaattagatgattggactctacaagattgctcctc 35354688  T
Q  216 ttctcacaagattcttctcttctctg 241  Q
    || |||||||||||||||||||||||    
T  35354689 ttatcacaagattcttctcttctctg 35354714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 16 - 235
Target Start/End: Original strand, 11259318 - 11259537
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    |||||| ||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  11259318 acatcacttctacacaaattcaacggattttctactttattaacaatcaattacaacttcaaaacctaattcccaaattctcataactacaatctacaac 11259417  T
Q  116 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagattgctcctc 215  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||    
T  11259418 atgctaaattcaatttcagaattatacaacttagaattagagaaagttagtctcacccttaccttaaattagataatcggactctacaagattgctcctc 11259517  T
Q  216 ttctcacaagattcttctct 235  Q
    ||||| ||||||||||||||    
T  11259518 ttctcgcaagattcttctct 11259537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 7 - 217
Target Start/End: Original strand, 49900608 - 49900818
Alignment:
Q  7 atgagatggacatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactaca 106  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49900608 atgatatgaacatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactaca 49900707  T
Q  107 acctacaacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcggactctacaaga 206  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||| |||||| |||    
T  49900708 acctacaacatgctaaactcaatttcagaattatacaacttagaattagagaaaattagtcccacccttaccttagattagatgatcggtctctacgaga 49900807  T
Q  207 ttgctcctctt 217  Q
    || ||||||||    
T  49900808 ttactcctctt 49900818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 16 - 241
Target Start/End: Original strand, 40812720 - 40812941
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40812720 acatcaattctacacaaattcaacggattttctactctattaacaatcaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 40812819  T
Q  116 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagattgctcctc 215  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||    |||||| ||||||||| |||| || ||    
T  40812820 atgctaaactcaatttcagaattatgcaacttagaattagagaaagttagtcccacccttaccttagat----tgatcgaactctacaaaattgttcatc 40812915  T
Q  216 ttctcacaagattcttctcttctctg 241  Q
    |||||||||||||||| |||||||||    
T  40812916 ttctcacaagattcttttcttctctg 40812941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 16 - 208
Target Start/End: Complemental strand, 17519038 - 17518846
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17519038 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 17518939  T
Q  116 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagatt 208  Q
    || ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||| ||||||    
T  17518938 attctaaagtcaatttcagaattatacaacttagaattagagaaagttagtcccacccttgccttagattagatgatcggactctagaagatt 17518846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 16 - 208
Target Start/End: Complemental strand, 17533900 - 17533708
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17533900 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 17533801  T
Q  116 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagatt 208  Q
    || ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||| ||||||    
T  17533800 attctaaagtcaatttcagaattatacaacttagaattagagaaagttagtcccacccttgccttagattagatgatcggactctagaagatt 17533708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 16 - 241
Target Start/End: Complemental strand, 15931672 - 15931448
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    ||||||||||||||||||||||||| ||||||||||||||||| ||  |||||||||||| |||||||||||| |||||| ||||||||||||||| |||    
T  15931672 acatcaattctacacaaattcaacgaattttctactctattaataattaattacaacttcgaaacctaattccaaaattctcataactacaacctaaaac 15931573  T
Q  116 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagattgctcctc 215  Q
    ||||||||||| ||||||||||||||| |||||||||||||||||||||||| |||| ||||||||||||| ||||||||||||||||||||| ||||||    
T  15931572 atgctaaactctatttcagaattatac-acttagaattagagaaagttagtctcacctttaccttaaattaaatgatcggactctacaagattactcctc 15931474  T
Q  216 ttctcacaagattcttctcttctctg 241  Q
    ||||||||||||||||||||||||||    
T  15931473 ttctcacaagattcttctcttctctg 15931448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 16 - 181
Target Start/End: Original strand, 40807883 - 40808048
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40807883 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 40807982  T
Q  116 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 181  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40807983 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 40808048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 32 - 241
Target Start/End: Original strand, 14508749 - 14508959
Alignment:
Q  32 aattcaacggattttctactctattaacaaccaattacaacttc-aaaacctaattcccaaattcccataactacaacctacaacatgctaaactcaatt 130  Q
    |||||| | |||| |||||||| |  |||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||| |||||||    
T  14508749 aattcatcagattatctactctttctacaaccaattacaacttccaaaacctaattccaaaattcccataactacaacctacaacatgctaacctcaatt 14508848  T
Q  131 tcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagattgctcctcttctcacaagattct 230  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| ||| ||||||||||||||| |    
T  14508849 tcagaattatacaacttagaattagagaaagttagtctcacccttaccataaattagatgatcggactctacaagattactcttcttctcacaagattat 14508948  T
Q  231 tctcttctctg 241  Q
    |||||||||||    
T  14508949 tctcttctctg 14508959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 16 - 181
Target Start/End: Original strand, 44274305 - 44274470
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    ||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  44274305 acatcaattctacacaaattcaatgaattttctactctattaacaaccaattacaacttcaaaatataattcccaaattcccataactacaacctacaac 44274404  T
Q  116 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 181  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44274405 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 44274470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 16 - 166
Target Start/End: Complemental strand, 50348191 - 50348041
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50348191 acatcaattctacacaaattcaacagattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 50348092  T
Q  116 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagt 166  Q
    |||||||||||||||| | ||||||||||||||||||||||||||||||||    
T  50348091 atgctaaactcaattttaaaattatacaacttagaattagagaaagttagt 50348041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 16 - 181
Target Start/End: Original strand, 10563596 - 10563760
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    ||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||    
T  10563596 acatcaattctac-caaattcaacggcttttctactctattaacaaccaattacaacttcaaaacctaattcccaaatttccataactacaaactacaac 10563694  T
Q  116 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 181  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||||||||||||| ||||||||    
T  10563695 atgctaaactcaatttcataattatacaacttaaaattagagaaagttagtcccaccattacctta 10563760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 16 - 177
Target Start/End: Original strand, 10311415 - 10311575
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    |||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||    
T  10311415 acatcacttctac-caaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattctcataactacaacctacaac 10311513  T
Q  116 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttac 177  Q
    |||| ||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  10311514 atgcaaaattcaatttcagaattatacaacgtagaattagagaaagttagtcccacccttac 10311575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 118 - 241
Target Start/End: Original strand, 17541423 - 17541546
Alignment:
Q  118 gctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagattgctcctctt 217  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  17541423 gctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcagactctacaagattgctcctctt 17541522  T
Q  218 ctcacaagattcttctcttctctg 241  Q
    ||||||||||||||||||||||||    
T  17541523 ctcacaagattcttctcttctctg 17541546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 21 - 181
Target Start/End: Complemental strand, 19568368 - 19568208
Alignment:
Q  21 aattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacatgct 120  Q
    ||||||||||  |||||||||||| |||||| |   ||| ||||||||||||||| || ||||||||||||||||||| |||||||||||||||| || |    
T  19568368 aattctacaccgattcaacggattctctactattacaactaccaattacaacttctaaccctaattcccaaattcccaaaactacaacctacaacctgtt 19568269  T
Q  121 aaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 181  Q
    |||   | ||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  19568268 aaatctagtttcagaatcatacaacttagaattagagaaagttagtcccacccttacctta 19568208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 59 - 196
Target Start/End: Original strand, 11563654 - 11563792
Alignment:
Q  59 caaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacatgctaaactcaattt-cagaattatacaacttagaattagag 157  Q
    ||||||||||||||||  |||||||||||||||||||||| |||||||||||||||| || |||| |  |||| ||||||||||| ||||||||||||||    
T  11563654 caaccaattacaacttttaaacctaattcccaaattcccaaaactacaacctacaacttgttaaatttgattttcagaattataccacttagaattagag 11563753  T
Q  158 aaagttagtcccacccttaccttaaattagatgatcgga 196  Q
    || ||||||||||||||||||||| ||||||||||||||    
T  11563754 aaggttagtcccacccttaccttagattagatgatcgga 11563792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 64 - 156
Target Start/End: Complemental strand, 35064658 - 35064566
Alignment:
Q  64 aattacaacttcaaaacctaattcccaaattcccataactacaacctacaacatgctaaactcaatttcagaattatacaacttagaattaga 156  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  35064658 aattacaacttcaaaacctaattcccaaatttccataactacaacctacaacatgctaaactcaatttcaaaattatacaacttagaattaga 35064566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 59 - 241
Target Start/End: Complemental strand, 45530725 - 45530544
Alignment:
Q  59 caaccaattacaacttcaaaacctaattcc-caaattcccataactacaacctacaacatgctaaactcaattt-cagaattatacaacttagaattaga 156  Q
    ||||||||||||||||| || ||||||| | |||||||||| |||||||||| ||||| || |||| ||||||| |||||| ||| | ||||||||||      
T  45530725 caaccaattacaacttctaaccctaatttcgcaaattcccaaaactacaacccacaacctgttaaattcaattttcagaatcatata-cttagaattatt 45530627  T
Q  157 gaaagttagtcccacccttaccttaaattagatgatcggactctacaagattgctcctcttctcacaagattcttctcttctctg 241  Q
     || |||||||||| | ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||    
T  45530626 aaatgttagtcccatc-ttaccttaaattagatgatcggactctacaagattgctccttttctcacaagattctt-tcttctctg 45530544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 61 - 181
Target Start/End: Original strand, 33565018 - 33565139
Alignment:
Q  61 accaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacatgctaaactcaattt-cagaattatacaacttagaattagagaa 159  Q
    ||||||||||||||| |||||||||| ||||||||||| |||| ||||||||||| || |||| ||||||| ||||||||||| ||||||||||||||||    
T  33565018 accaattacaacttctaaacctaatttccaaattcccaaaacttcaacctacaacttgttaaattcaattttcagaattataccacttagaattagagaa 33565117  T
Q  160 agttagtcccacccttacctta 181  Q
    |||||||| |||||||||||||    
T  33565118 agttagtcacacccttacctta 33565139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 21 - 181
Target Start/End: Complemental strand, 9511076 - 9510916
Alignment:
Q  21 aattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacatgct 120  Q
    ||||||| || || ||||| ||||||||||| |   ||||||||||||||||||| ||||||||||| |||||||||| |||||||| |||| || || |    
T  9511076 aattctaaacgaaatcaacagattttctactattaaaacaaccaattacaacttctaaacctaattctcaaattcccaaaactacaatctaccacctgtt 9510977  T
Q  121 aaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 181  Q
    |||  || ||||||||| ||||||||||||||||||||||||||||  |||||||||||||    
T  9510976 aaatccagtttcagaatcatacaacttagaattagagaaagttagtttcacccttacctta 9510916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 21 - 181
Target Start/End: Complemental strand, 9519051 - 9518891
Alignment:
Q  21 aattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacatgct 120  Q
    ||||||| || || ||||| ||||||||||| |   ||||||||||||||||||| ||||||||||| |||||||||| |||||||| |||| || || |    
T  9519051 aattctaaacgaaatcaacagattttctactattaaaacaaccaattacaacttctaaacctaattctcaaattcccaaaactacaatctaccacctgtt 9518952  T
Q  121 aaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 181  Q
    |||  || ||||||||| ||||||||||||||||||||||||||||  |||||||||||||    
T  9518951 aaatccagtttcagaatcatacaacttagaattagagaaagttagtttcacccttacctta 9518891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 59 - 181
Target Start/End: Complemental strand, 42324094 - 42323971
Alignment:
Q  59 caaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacatgctaaactcaa-tttcagaattatacaacttagaattagag 157  Q
    ||||||||||||||||| || ||||||| ||||||||||| |||||||||||||||||||  ||| |||| |||||||||||||||||||| ||||| |     
T  42324094 caaccaattacaacttctaaccctaatttccaaattcccaaaactacaacctacaacatgtcaaattcaattttcagaattatacaacttaaaattaaat 42323995  T
Q  158 aaagttagtcccacccttacctta 181  Q
    || |||||||||||||||||||||    
T  42323994 aatgttagtcccacccttacctta 42323971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 61 - 181
Target Start/End: Complemental strand, 35961049 - 35960928
Alignment:
Q  61 accaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacatgctaaactcaattt-cagaattatacaacttagaattagagaa 159  Q
    ||||||||||||||| |||||||||| ||||||| ||| |||| ||||||||||| || |||| ||||||| ||||||||||| || |||||||||||||    
T  35961049 accaattacaacttctaaacctaatttccaaatttccaaaacttcaacctacaacttgttaaattcaattttcagaattataccacatagaattagagaa 35960950  T
Q  160 agttagtcccacccttacctta 181  Q
    ||||| ||||||||||||||||    
T  35960949 agttaatcccacccttacctta 35960928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 77 - 181
Target Start/End: Original strand, 16050875 - 16050979
Alignment:
Q  77 aaacctaattcccaaattcccataactacaacctacaacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccaccctta 176  Q
    ||||||||||| ||||| | || ||||||||| |||||| || ||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  16050875 aaacctaattctcaaatcctcaaaactacaacatacaacttgttaaacccaatttcagaatcatacaacttagaattagagaaagttagtcccaccctta 16050974  T
Q  177 cctta 181  Q
    |||||    
T  16050975 cctta 16050979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 129 - 241
Target Start/End: Complemental strand, 14152451 - 14152339
Alignment:
Q  129 tttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagattgctcctcttctcacaagatt 228  Q
    ||||||||| |||||||| |  ||||||||||| |||||||||||||||||||  |||   ||||| ||| |||||||||||||||||||||||||||||    
T  14152451 tttcagaatgatacaactcattattagagaaagctagtcccacccttaccttaggttaatggatcgaactatacaagattgctcctcttctcacaagatt 14152352  T
Q  229 cttctcttctctg 241  Q
    |||||||||||||    
T  14152351 cttctcttctctg 14152339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 129 - 208
Target Start/End: Original strand, 15566744 - 15566823
Alignment:
Q  129 tttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagatt 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| |||||||||||| ||||||||    
T  15566744 tttcagaattatacaacttagaattagagaaagttagtcccacccttactttagattacatgatcggactcaacaagatt 15566823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 151 - 238
Target Start/End: Complemental strand, 50350846 - 50350759
Alignment:
Q  151 attagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagattgctcctcttctcacaagattcttctcttct 238  Q
    |||| |||| ||||||||||||||||||||| |||||||||||||||||||||| | || ||||||||||||||||||||||||||||    
T  50350846 attaaagaaggttagtcccacccttaccttagattagatgatcggactctacaacactgttcctcttctcacaagattcttctcttct 50350759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 69 - 181
Target Start/End: Original strand, 13185834 - 13185947
Alignment:
Q  69 caacttcaaaacctaattcccaaattcccataactacaacctacaacatgctaaactcaatttc-agaattatacaacttagaattagagaaagttagtc 167  Q
    ||||||| |||||||||||||||||| ||| |||||||||||||||| || |||| || ||||  |||||||||  ||||| ||||||||||||||||||    
T  13185834 caacttctaaacctaattcccaaatttccaaaactacaacctacaacttgttaaattcgatttttagaattatatcacttaaaattagagaaagttagtc 13185933  T
Q  168 ccacccttacctta 181  Q
    ||||||||||||||    
T  13185934 ccacccttacctta 13185947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 16 - 80
Target Start/End: Complemental strand, 35064745 - 35064681
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaac 80  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  35064745 acatcaattctacacaaattcaacggattttctactatattaacaaccaattacaacttcaaaac 35064681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 59 - 182
Target Start/End: Complemental strand, 49968981 - 49968858
Alignment:
Q  59 caaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacatgctaaactcaa-tttcagaattatacaacttagaattagag 157  Q
    ||||||||||||||||  ||||||||||||||||||| || |||||||| ||||||| || |||| |||| ||||||||| |||| |||||||||||| |    
T  49968981 caaccaattacaacttataaacctaattcccaaattctcaaaactacaagctacaacctgttaaattcaattttcagaatcatac-acttagaattagtg 49968883  T
Q  158 aaagttagtcccacccttaccttaa 182  Q
    || ||||||||||| ||||||||||    
T  49968882 aaggttagtcccactcttaccttaa 49968858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 174 - 241
Target Start/End: Complemental strand, 17325628 - 17325561
Alignment:
Q  174 ttaccttaaattagatgatcggactctacaagattgctcctcttctcacaagattcttctcttctctg 241  Q
    ||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||    
T  17325628 ttaccttaaattagatgattggactctacaagattactcctcttctcacaagattcttctcttctctg 17325561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 16 - 74
Target Start/End: Complemental strand, 5200335 - 5200277
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaactt 74  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5200335 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaactt 5200277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 77 - 181
Target Start/End: Complemental strand, 24177840 - 24177736
Alignment:
Q  77 aaacctaattcccaaattcccataactacaacctacaacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccaccctta 176  Q
    |||| ||||||||||||| ||| ||||||||||||| || |  ||||  || |||||||||||||||||||| |||||||||||||| ||||||||||||    
T  24177840 aaacataattcccaaatttccaaaactacaacctaccacctattaaatccagtttcagaattatacaacttataattagagaaagtttgtcccaccctta 24177741  T
Q  177 cctta 181  Q
    |||||    
T  24177740 cctta 24177736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 80 - 178
Target Start/End: Complemental strand, 11885658 - 11885560
Alignment:
Q  80 cctaattcccaaattcccataactacaacctacaacatgctaaactcaattt-cagaattatacaacttagaattagagaaagttagtcccacccttacc 178  Q
    |||||||| |||||||||| |||||||||||||||| || ||||  |||||| ||||||||||  |||||||||||||||||||||||||||||||||||    
T  11885658 cctaattctcaaattccca-aactacaacctacaacttgttaaatccaattttcagaattataacacttagaattagagaaagttagtcccacccttacc 11885560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 160 - 220
Target Start/End: Complemental strand, 50347656 - 50347596
Alignment:
Q  160 agttagtcccacccttaccttaaattagatgatcggactctacaagattgctcctcttctc 220  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  50347656 agttagtctcacccttaccttaaattagatgatcggactctacaagattgctccttttctc 50347596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 133 - 220
Target Start/End: Complemental strand, 14641596 - 14641509
Alignment:
Q  133 agaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagattgctcctcttctc 220  Q
    |||||||||||||  |  ||||||||||| || |||||||||||||||| ||||||||||||| |||||| |||||||||||||||||    
T  14641596 agaattatacaacccattattagagaaagctaatcccacccttaccttagattagatgatcggtctctacgagattgctcctcttctc 14641509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 59 - 164
Target Start/End: Original strand, 37038978 - 37039085
Alignment:
Q  59 caaccaattacaacttcaaaacctaatt-cccaaattcccataactacaacctacaacatgctaaactcaa-tttcagaattatacaacttagaattaga 156  Q
    ||||||||||||||||  || ||||||| |||||||||||| ||||||||||||||||||| ||||  ||| |||||||||||||||||||| ||||| |    
T  37038978 caaccaattacaacttttaaccctaatttcccaaattcccaaaactacaacctacaacatgttaaatccaattttcagaattatacaacttataattaaa 37039077  T
Q  157 gaaagtta 164  Q
    ||| ||||    
T  37039078 gaatgtta 37039085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 100 - 181
Target Start/End: Complemental strand, 12509431 - 12509350
Alignment:
Q  100 aactacaacctacaacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 181  Q
    ||||||| ||||| ||||| ||||  ||||||||||||||||||||||||||||| |||| ||| |||||||||||||||||    
T  12509431 aactacatcctaccacatgttaaatccaatttcagaattatacaacttagaattaaagaaggtttgtcccacccttacctta 12509350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 129 - 181
Target Start/End: Complemental strand, 15446920 - 15446868
Alignment:
Q  129 tttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 181  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  15446920 tttcagaataatacaacttagaattagagaaagttagtcccacccttacctta 15446868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 113 - 181
Target Start/End: Original strand, 36528851 - 36528919
Alignment:
Q  113 aacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 181  Q
    |||||| ||||| |||| |||||||||||  ||||||||||||||||||||| ||||||||||||||||    
T  36528851 aacatgttaaacccaatctcagaattatattacttagaattagagaaagttaatcccacccttacctta 36528919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 140 - 181
Target Start/End: Complemental strand, 5200284 - 5200243
Alignment:
Q  140 tacaacttagaattagagaaagttagtcccacccttacctta 181  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  5200284 tacaacttagaattagagaaagttagtcccacccttacctta 5200243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 151 - 208
Target Start/End: Original strand, 6159427 - 6159484
Alignment:
Q  151 attagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagatt 208  Q
    |||||||||||  |||| ||||||||||||| ||||||||||||||||||||||||||    
T  6159427 attagagaaagcgagtctcacccttaccttagattagatgatcggactctacaagatt 6159484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 151 - 208
Target Start/End: Complemental strand, 53646089 - 53646032
Alignment:
Q  151 attagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagatt 208  Q
    |||| |||| ||||||||||||||||||||| ||||||||||| ||||||||||||||    
T  53646089 attaaagaaggttagtcccacccttaccttagattagatgatcagactctacaagatt 53646032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 151 - 220
Target Start/End: Complemental strand, 12917336 - 12917265
Alignment:
Q  151 attagagaaagttagtcccacccttaccttaaattagatga--tcggactctacaagattgctcctcttctc 220  Q
    |||||||||||||||||||||||||| |||| ||| | |||  |||||||||||||| ||||||||||||||    
T  12917336 attagagaaagttagtcccacccttatcttagattggttgaattcggactctacaagcttgctcctcttctc 12917265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 151 - 219
Target Start/End: Complemental strand, 3527187 - 3527117
Alignment:
Q  151 attagagaaagttagtcccacccttaccttaaattagatga--tcggactctacaagattgctcctcttct 219  Q
    ||||||||||| ||||||||||||||||||| || || |||  |||||||||||||| |||||||||||||    
T  3527187 attagagaaagctagtcccacccttaccttagataagttgaattcggactctacaagtttgctcctcttct 3527117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 129 - 220
Target Start/End: Original strand, 29907639 - 29907731
Alignment:
Q  129 tttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgat--cggactctacaagattgctcctcttctc 220  Q
    |||||||||||||||||  |  |||| |||||| ||||||||||||||||||| ||||||||||  |||||||||  || ||||||||||||||    
T  29907639 tttcagaattatacaacccaatattaaagaaagctagtcccacccttaccttagattagatgattccggactcta-gagcttgctcctcttctc 29907731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 129 - 220
Target Start/End: Original strand, 29948805 - 29948897
Alignment:
Q  129 tttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgat--cggactctacaagattgctcctcttctc 220  Q
    |||||||||||||||||  |  |||| |||||| ||||||||||||||||||| ||||||||||  |||||||||  || ||||||||||||||    
T  29948805 tttcagaattatacaacccaatattaaagaaagctagtcccacccttaccttagattagatgattccggactcta-gagcttgctcctcttctc 29948897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 129 - 220
Target Start/End: Original strand, 29997959 - 29998051
Alignment:
Q  129 tttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgat--cggactctacaagattgctcctcttctc 220  Q
    |||||||||||||||||  |  |||| |||||| ||||||||||||||||||| ||||||||||  |||||||||  || ||||||||||||||    
T  29997959 tttcagaattatacaacccaatattaaagaaagctagtcccacccttaccttagattagatgattccggactcta-gagcttgctcctcttctc 29998051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 129 - 182
Target Start/End: Original strand, 22652773 - 22652826
Alignment:
Q  129 tttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaa 182  Q
    ||||||||||| |  |||||||||||||||||||||||||||| ||||||||||    
T  22652773 tttcagaattaaattacttagaattagagaaagttagtcccactcttaccttaa 22652826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 78 - 178
Target Start/End: Complemental strand, 14250185 - 14250085
Alignment:
Q  78 aacctaattcccaaattcccataactacaacctacaacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttac 177  Q
    ||||||||||  ||||  ||| ||||||| | ||||||||| ||||  |||||| | ||||| |||||||||||||| |||| ||||||||||| |||||    
T  14250185 aacctaattcttaaatctccaaaactacatcttacaacatgttaaatccaatttgaaaattacacaacttagaattaaagaaggttagtcccactcttac 14250086  T
Q  178 c 178  Q
    |    
T  14250085 c 14250085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 129 - 181
Target Start/End: Original strand, 16979912 - 16979964
Alignment:
Q  129 tttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 181  Q
    ||||||||||| |  ||||||||||| ||||||||||||||||||||||||||    
T  16979912 tttcagaattaaaatacttagaattaaagaaagttagtcccacccttacctta 16979964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 129 - 181
Target Start/End: Original strand, 17208524 - 17208576
Alignment:
Q  129 tttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 181  Q
    |||||||||||||||||| |  ||||||||||| |||||||||||||||||||    
T  17208524 tttcagaattatacaactcattattagagaaagctagtcccacccttacctta 17208576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 129 - 220
Target Start/End: Complemental strand, 22841331 - 22841239
Alignment:
Q  129 tttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatga--tcggactctacaagattgctcctcttctc 220  Q
    |||||||||||||||||  |  ||||||||||| ||||||||||||||| ||| ||| | |||  |||||||||| ||| ||||||||||||||    
T  22841331 tttcagaattatacaacccattattagagaaagctagtcccacccttacattagattggttgaattcggactcta-aagcttgctcctcttctc 22841239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 80 - 180
Target Start/End: Complemental strand, 22758935 - 22758835
Alignment:
Q  80 cctaattcccaaattcccataactacaacctacaacatgctaaactcaattt-cagaattatacaacttagaattagagaaagttagtcccacccttacc 178  Q
    |||||||||||||| | || ||||| ||||||||||||| ||||  |||||| |||||||| |  |||||||||||  ||| ||||||| ||||||||||    
T  22758935 cctaattcccaaatcctcaaaacta-aacctacaacatgttaaatacaattttcagaattaaaacacttagaattattgaaggttagtctcacccttacc 22758837  T
Q  179 tt 180  Q
    ||    
T  22758836 tt 22758835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 113 - 181
Target Start/End: Complemental strand, 3264031 - 3263963
Alignment:
Q  113 aacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 181  Q
    |||||| ||||| |||| ||| |||||||  |||||||||||||||| |||| ||| ||||||||||||    
T  3264031 aacatgttaaacccaatctcataattatattacttagaattagagaaggttaatccgacccttacctta 3263963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 73 - 139
Target Start/End: Complemental strand, 31223952 - 31223887
Alignment:
Q  73 ttcaaaacctaattcccaaattcccataactacaacctacaacatgctaaactcaatttcagaatta 139  Q
    |||||| ||||||||||||||||| | |||||||||||||||| || ||||  || |||||||||||    
T  31223952 ttcaaaccctaattcccaaattccaa-aactacaacctacaacctgttaaatccagtttcagaatta 31223887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 220
Target Start/End: Complemental strand, 45803383 - 45803291
Alignment:
Q  129 tttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatga--tcggactctacaagattgctcctcttctc 220  Q
    |||||||||||||||||  |  ||||||||||| |||||||||||| || ||| ||| | |||  |||||||||| ||| ||||||||||||||    
T  45803383 tttcagaattatacaacccattattagagaaagctagtcccaccctaactttagattggttgaattcggactcta-aagtttgctcctcttctc 45803291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 181
Target Start/End: Original strand, 5215647 - 5215699
Alignment:
Q  129 tttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 181  Q
    ||||| |||||||||||| |  ||||||||||| |||| ||||||||||||||    
T  5215647 tttcataattatacaactcattattagagaaagctagtgccacccttacctta 5215699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 106
Target Start/End: Complemental strand, 22146880 - 22146832
Alignment:
Q  59 caaccaattacaacttcaaaacctaa-ttcccaaattcccataactaca 106  Q
    ||||||||||||||||| || ||||| |||||||||||||| |||||||    
T  22146880 caaccaattacaacttctaaccctaatttcccaaattcccaaaactaca 22146832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 220
Target Start/End: Original strand, 25202168 - 25202227
Alignment:
Q  163 tagtcccacccttaccttaaattagatga--tcggactctacaagattgctcctcttctc 220  Q
    ||||||||||||||||||| |||   |||  |||||||||||||| ||||||||||||||    
T  25202168 tagtcccacccttaccttagatttattgaattcggactctacaagcttgctcctcttctc 25202227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1283 (Bit Score: 206; Significance: 1e-113; HSPs: 1)
Name: scaffold1283
Description:

Target: scaffold1283; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 16 - 241
Target Start/End: Complemental strand, 633 - 408
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  633 acatcaattctacacaaattcaacttattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 534  T
Q  116 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagattgctcctc 215  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||    
T  533 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcagactctacaagattgttcctc 434  T
Q  216 ttctcacaagattcttctcttctctg 241  Q
    |||||||||||||||||| |||||||    
T  433 ttctcacaagattcttcttttctctg 408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 206; Significance: 1e-113; HSPs: 3)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 16 - 241
Target Start/End: Original strand, 31881 - 32106
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    |||||| |||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  31881 acatcacttctacacaaattcaacgaattttctgctctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctataac 31980  T
Q  116 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagattgctcctc 215  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  31981 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcacacccttaccttaaattagatgatcggactctacaagattgctcctc 32080  T
Q  216 ttctcacaagattcttctcttctctg 241  Q
    ||||||||||||||||||||||||||    
T  32081 ttctcacaagattcttctcttctctg 32106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 16 - 241
Target Start/End: Original strand, 37188 - 37413
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    |||||| |||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  37188 acatcacttctacacaaattcaacgaattttctgctctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctataac 37287  T
Q  116 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagattgctcctc 215  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  37288 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcacacccttaccttaaattagatgatcggactctacaagattgctcctc 37387  T
Q  216 ttctcacaagattcttctcttctctg 241  Q
    ||||||||||||||||||||||||||    
T  37388 ttctcacaagattcttctcttctctg 37413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 16 - 241
Target Start/End: Original strand, 77574 - 77799
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  77574 acatcaattatacacaaattcaacggattttctactctattaacaacctattacaacttcaaaacctaattctcaaattcccataactacaacctacaac 77673  T
Q  116 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagattgctcctc 215  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| |||||||||||||| ||||||    
T  77674 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtctcacccttaccttagattagatgatcagactctacaagattactcctc 77773  T
Q  216 ttctcacaagattcttctcttctctg 241  Q
    |||||||||||||||||| |||||||    
T  77774 ttctcacaagattcttctgttctctg 77799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 204; Significance: 1e-111; HSPs: 60)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 16 - 239
Target Start/End: Complemental strand, 42818072 - 42817849
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||    
T  42818072 acatcaattctacacaaattcaacggattttctactttattaacaaccaattacaacttcaaaatctaatttccaaattcccataactacaacctacaac 42817973  T
Q  116 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagattgctcctc 215  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  42817972 atgctaaactcaatttcagaattatacaacttagaattagagaaagtaagtcccacccttaccttaaattagatgatcggactctacaagattgctcttc 42817873  T
Q  216 ttctcacaagattcttctcttctc 239  Q
    ||||||||||||||||||||||||    
T  42817872 ttctcacaagattcttctcttctc 42817849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 23 - 235
Target Start/End: Original strand, 19140659 - 19140870
Alignment:
Q  23 ttctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacatgctaa 122  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  19140659 ttctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacttgctaa 19140758  T
Q  123 actcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagattgctcctcttctcac 222  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19140759 actcaatttcagaattatacaacttagaattagagaaag-tagtcccacccttaccttaaattagatgatcggactctacaagattgctcctcttctcac 19140857  T
Q  223 aagattcttctct 235  Q
    |||||||||||||    
T  19140858 aagattcttctct 19140870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 16 - 241
Target Start/End: Complemental strand, 39936175 - 39935947
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  39936175 acatcaattgtacacaaattcaacggattttctactctattaacaactaattacaacttcaaaacctaattcgcaaattcccataactacaacctacaac 39936076  T
Q  116 a---tgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagattgctc 212  Q
    |   ||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| || ||    
T  39936075 aacatgctaaactcaatttcataattatacaacttagaattagagaaagttaatcccacccttaccttaaattagatgatcggactctacaagactgttc 39935976  T
Q  213 ctcttctcacaagattcttctcttctctg 241  Q
     |||||||||| |||||||||||||||||    
T  39935975 ttcttctcacatgattcttctcttctctg 39935947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 16 - 194
Target Start/End: Original strand, 5761421 - 5761598
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5761421 acatcaattctacacaaattcaacggattttctactctattaacaactaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 5761520  T
Q  116 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcg 194  Q
    |||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||  |||||||||||    
T  5761521 atgctaaactcaatttcaaaattatac-acttagaattagagaaagttagtcccacccttaccttaggttagatgatcg 5761598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 7 - 181
Target Start/End: Complemental strand, 20083812 - 20083638
Alignment:
Q  7 atgagatggacatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactaca 106  Q
    |||| ||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  20083812 atgatatgaacatcaattctacacaaattcaacgaattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactaca 20083713  T
Q  107 acctacaacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 181  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  20083712 acctacaacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtctcacccttacctta 20083638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 16 - 171
Target Start/End: Complemental strand, 5082377 - 5082222
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5082377 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 5082278  T
Q  116 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccac 171  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  5082277 atgctaaactcaatttcataattatacaacttagaattagagaaagttagtcccac 5082222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 16 - 177
Target Start/End: Complemental strand, 6573221 - 6573060
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  6573221 acatcaattctacacaaattcaacgaattttctactctattaacaaccaattacaacttcaaaacctcattcccaaattcccataactacaacctacaac 6573122  T
Q  116 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttac 177  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||    
T  6573121 atgctaaactcaatttcaaaattatacaacttagaattagagaaagttagtctcacccttac 6573060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 16 - 181
Target Start/End: Complemental strand, 6101918 - 6101753
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    |||||||| ||||||||||||||  |||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||    
T  6101918 acatcaatactacacaaattcaatagattttctactctattaacaaccaattataacttcaaaacctgattcccaaattcccataactacaacctacaac 6101819  T
Q  116 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 181  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  6101818 atgctaaacacaatttcagaattatacaacttagaattagagaaagttagtcccacctttacctta 6101753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 16 - 177
Target Start/End: Original strand, 37292593 - 37292753
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    |||||| |||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||    
T  37292593 acatcacttctac-caaattcaacgaattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattctcataactacaacctacaac 37292691  T
Q  116 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttac 177  Q
    |||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  37292692 atgctaaacttaatttcagaattatacaacgtagaattagagaaagttagtcccacccttac 37292753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 16 - 177
Target Start/End: Original strand, 6202664 - 6202824
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    |||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||    
T  6202664 acatcacttctac-caaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattctcataactacaacctacaac 6202762  T
Q  116 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttac 177  Q
    |||| ||| ||||||||||||||||||||| ||||||||||||||||||||| |||||||||    
T  6202763 atgcaaaattcaatttcagaattatacaacgtagaattagagaaagttagtctcacccttac 6202824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 129 - 240
Target Start/End: Original strand, 18761448 - 18761559
Alignment:
Q  129 tttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagattgctcctcttctcacaagatt 228  Q
    |||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18761448 tttcagaattataccacttagaattagagaaagttagtcgcacccttaccttaaattagatgatcggactctacaagattgctcctcttctcacaagatt 18761547  T
Q  229 cttctcttctct 240  Q
    ||||||||||||    
T  18761548 cttctcttctct 18761559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 7 - 128
Target Start/End: Complemental strand, 20178704 - 20178581
Alignment:
Q  7 atgagatggacatcaattctacacaaattcaacggattttctactctattaacaaccaa-ttacaacttcaaaacctaattcccaaattcccataactac 105  Q
    |||| ||| ||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||    
T  20178704 atgatatgaacatcaattctacacaaattcaacgaattttctactctattaacaaccaatttacaacttcaaaacctaattcccaaattctcataactac 20178605  T
Q  106 aacctacaaca-tgctaaactcaa 128  Q
    ||||||||||| ||||||||||||    
T  20178604 aacctacaacattgctaaactcaa 20178581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 27 - 181
Target Start/End: Complemental strand, 20397656 - 20397510
Alignment:
Q  27 acacaaattcaacggattttctactctattaacaacc-aattacaacttcaaaacctaattcccaaattcccataactacaacctacaacatgctaaact 125  Q
    |||||||||||| |||||||||||||||||||||||| ||||||||||| ||||||||||||||||| || ||     |||||    |||||||||||||    
T  20397656 acacaaattcaatggattttctactctattaacaacctaattacaactttaaaacctaattcccaaaatcaca-----acaac----aacatgctaaact 20397566  T
Q  126 caatttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 181  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  20397565 caatttcagaattatacaacttagaattagagaaagttaatcccacccttacctta 20397510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 21 - 181
Target Start/End: Complemental strand, 22532292 - 22532132
Alignment:
Q  21 aattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacatgct 120  Q
    |||||||||| ||||||||  |||||||||| |   ||||| ||||||||||||  ||||||||||||||| || ||| ||||||||||||| || || |    
T  22532292 aattctacaccaattcaacaaattttctactattaaaacaatcaattacaacttttaaacctaattcccaattttccaaaactacaacctaccacctgtt 22532193  T
Q  121 aaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 181  Q
    |||  || ||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  22532192 aaatccagtttcagaatcatacaacttagaattagagaaagttagtcccacccttacctta 22532132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 21 - 181
Target Start/End: Complemental strand, 22536977 - 22536817
Alignment:
Q  21 aattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacatgct 120  Q
    |||||||||| ||||||||  |||||||||| |   ||||| ||||||||||||  ||||||||||||||| || ||| ||||||||||||| || || |    
T  22536977 aattctacaccaattcaacaaattttctactattaaaacaatcaattacaacttttaaacctaattcccaattttccaaaactacaacctaccacctgtt 22536878  T
Q  121 aaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 181  Q
    |||  || ||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  22536877 aaatccagtttcagaatcatacaacttagaattagagaaagttagtcccacccttacctta 22536817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 141 - 241
Target Start/End: Complemental strand, 23943866 - 23943766
Alignment:
Q  141 acaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagattgctcctcttctcacaagattcttctcttctct 240  Q
    ||||||||||||||||||||| ||  ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||    
T  23943866 acaacttagaattagagaaagctatacccacccttaccttaaattagatgaccggactctacaagattgctcctcttctcacaaaattcttctcttctct 23943767  T
Q  241 g 241  Q
    |    
T  23943766 g 23943766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 151 - 241
Target Start/End: Complemental strand, 21579236 - 21579146
Alignment:
Q  151 attagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagattgctcctcttctcacaagattcttctcttctctg 241  Q
    |||| |||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21579236 attaaagaaggttagtcacacccttaccttaaattagatgatcggactctacaagattgctcctcttctcacaagattcttctcttctctg 21579146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 151 - 241
Target Start/End: Original strand, 36306019 - 36306109
Alignment:
Q  151 attagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagattgctcctcttctcacaagattcttctcttctctg 241  Q
    ||||||||||| ||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36306019 attagagaaagctagtctcacccttaccttagattagatgatcggactctacaagattgctcctcttctcacaagattcttctcttctctg 36306109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 13 - 181
Target Start/End: Complemental strand, 31722661 - 31722493
Alignment:
Q  13 tggacatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctac 112  Q
    ||||||| |||||||||  |||||||| ||||| |||||||   | ||||||||||||||||| ||||| |||| ||||||||||| |||||||||||||    
T  31722661 tggacattaattctacatcaattcaacagattt-ctactcttaaatcaaccaattacaacttctaaaccaaatttccaaattcccaaaactacaacctac 31722563  T
Q  113 aacatgctaaactcaattt-cagaattatacaacttagaattagagaaagttagtcccacccttacctta 181  Q
    ||| || |||| || |||| || |||||||| ||||||||||||||||||||||||||||||||| ||||    
T  31722562 aacttgttaaattcgattttcaaaattataccacttagaattagagaaagttagtcccacccttatctta 31722493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 134 - 238
Target Start/End: Complemental strand, 22258353 - 22258249
Alignment:
Q  134 gaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagattgctcctcttctcacaagattcttct 233  Q
    ||||||||||||| |  ||||||||||| ||||| ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||    
T  22258353 gaattatacaactcattattagagaaagctagtctcacccttaccttaaattagatgatcggacactacaagattgctcttcttctcacaagattcttct 22258254  T
Q  234 cttct 238  Q
    |||||    
T  22258253 cttct 22258249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 59 - 196
Target Start/End: Complemental strand, 20022155 - 20022025
Alignment:
Q  59 caaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacatgctaaactcaattt-cagaattatacaacttagaattagag 157  Q
    ||||||||||||||||| ||||||||||||||||        ||||||||||||||| || |||| || |||| ||||||||||| ||||||||||||||    
T  20022155 caaccaattacaacttctaaacctaattcccaaa--------actacaacctacaacttgttaaattcgattttcagaattataccacttagaattagag 20022064  T
Q  158 aaagttagtcccacccttaccttaaattagatgatcgga 196  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  20022063 aaagttagtcccacccttaccttagattagatgatcgga 20022025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 151 - 240
Target Start/End: Original strand, 18834444 - 18834533
Alignment:
Q  151 attagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagattgctcctcttctcacaagattcttctcttctct 240  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| | |||||||||||| |||||||||||||||||||||| ||||||    
T  18834444 attagagaaagctagtcccacccttaccttaaattagatgatcgggcactacaagattgcccctcttctcacaagattcttcttttctct 18834533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 59 - 181
Target Start/End: Complemental strand, 45469342 - 45469219
Alignment:
Q  59 caaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacatgctaaactcaattt-cagaattatacaacttagaattagag 157  Q
    ||||||||||||||||| |||| |||||||||||||  || ||||| |||||||||| || |||| || |||| ||||||||||| ||||||||||||||    
T  45469342 caaccaattacaacttctaaacataattcccaaatttacaaaactataacctacaacttgttaaattcgattttcagaattataccacttagaattagag 45469243  T
Q  158 aaagttagtcccacccttacctta 181  Q
    |||||||||| |||||||||||||    
T  45469242 aaagttagtctcacccttacctta 45469219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 77 - 181
Target Start/End: Complemental strand, 17906953 - 17906849
Alignment:
Q  77 aaacctaattcccaaattcccataactacaacctacaacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccaccctta 176  Q
    ||||||||||| ||||| ||||  ||||||||||||||| || ||||  || ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  17906953 aaacctaattctcaaatccccaacactacaacctacaacttgttaaatccagtttcagaatcatacaacttagaattagagaaagttagtcccaccctta 17906854  T
Q  177 cctta 181  Q
    |||||    
T  17906853 cctta 17906849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 21 - 177
Target Start/End: Complemental strand, 39694437 - 39694281
Alignment:
Q  21 aattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacatgct 120  Q
    |||||||||| |||||||| |||| |||||| |    ||||| ||||||||| || || ||||||||||||||||||| |||||||||||||||| || |    
T  39694437 aattctacaccaattcaacagattctctactattacgacaactaattacaacgtctaaccctaattcccaaattcccaaaactacaacctacaacttgtt 39694338  T
Q  121 aaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttac 177  Q
    |||  || ||||||||| |||||||||| |||||||||||| ||||| | |||||||    
T  39694337 aaatccagtttcagaatcatacaacttataattagagaaagctagtcacgcccttac 39694281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 59 - 181
Target Start/End: Complemental strand, 22318033 - 22317911
Alignment:
Q  59 caaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacatgctaaactcaa-tttcagaattatacaacttagaattagag 157  Q
    ||||||||||||||||| |||||||| ||||||||||||  |||||||||||| ||| || |||| |||| ||||||||| |||| |||||||||||| |    
T  22318033 caaccaattacaacttctaaacctaaatcccaaattcccgaaactacaacctagaacctgttaaattcaattttcagaatcatac-acttagaattagtg 22317935  T
Q  158 aaagttagtcccacccttacctta 181  Q
    || |||||||||||||||||||||    
T  22317934 aaggttagtcccacccttacctta 22317911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 151 - 241
Target Start/End: Complemental strand, 29762898 - 29762808
Alignment:
Q  151 attagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagattgctcctcttctcacaagattcttctcttctctg 241  Q
    |||| |||| ||||||  |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||  |||||||||    
T  29762898 attaaagaaggttagtttcacccttaccttaaattagatgatcggactctacaagattgctcttcttctcacaagattctcttcttctctg 29762808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 69 - 181
Target Start/End: Complemental strand, 36727151 - 36727038
Alignment:
Q  69 caacttcaaaacctaattcccaaattcccataactacaacctacaacatgctaaactcaattt-cagaattatacaacttagaattagagaaagttagtc 167  Q
    ||||||| ||||||||||| ||||| || | |||||||||||||||| || ||||  |||||| ||||||||||| ||||||||||||||||||||||||    
T  36727151 caacttctaaacctaattctcaaatcccaaaaactacaacctacaacttgttaaatccaattttcagaattataccacttagaattagagaaagttagtc 36727052  T
Q  168 ccacccttacctta 181  Q
     |||||||||||||    
T  36727051 tcacccttacctta 36727038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 129 - 220
Target Start/End: Original strand, 22208269 - 22208360
Alignment:
Q  129 tttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagattgctcctcttctc 220  Q
    |||||||||||||||||  |  ||||||||||| ||||||||||||||||||| ||||||||||||| |||||| |||||||||||||||||    
T  22208269 tttcagaattatacaacccattattagagaaagctagtcccacccttaccttagattagatgatcggtctctaccagattgctcctcttctc 22208360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 129 - 194
Target Start/End: Complemental strand, 4380669 - 4380604
Alignment:
Q  129 tttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcg 194  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||    
T  4380669 tttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaggttagatgatcg 4380604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 69 - 181
Target Start/End: Complemental strand, 23900100 - 23899987
Alignment:
Q  69 caacttcaaaacctaattcccaaattcccataactacaacctacaacatgctaaactcaatt-tcagaattatacaacttagaattagagaaagttagtc 167  Q
    ||||||| ||||||| ||| ||||| |||| ||||||| |||||||| || |||| |||||| ||||| |||||  ||||||||||||||||||||||||    
T  23900100 caacttctaaacctagttctcaaatccccaaaactacagcctacaacttgttaaattcaattctcagagttatatcacttagaattagagaaagttagtc 23900001  T
Q  168 ccacccttacctta 181  Q
     |||||||||||||    
T  23900000 acacccttacctta 23899987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 161 - 220
Target Start/End: Complemental strand, 12037184 - 12037125
Alignment:
Q  161 gttagtcccacccttaccttaaattagatgatcggactctacaagattgctcctcttctc 220  Q
    ||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||    
T  12037184 gttagtcccacccttaccttatattagatgatcggactctacgagattgctcctcttctc 12037125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 78 - 181
Target Start/End: Original strand, 19700109 - 19700213
Alignment:
Q  78 aacctaattcccaaattcccataactacaacctacaacatgctaaactcaatt-tcagaattatacaacttagaattagagaaagttagtcccaccctta 176  Q
    |||||||| | ||||| | || ||||||||||||||||||| ||||  | ||| | |||||||||||||||||||||| |||| ||||||||||||||||    
T  19700109 aacctaatcctcaaatcctcaaaactacaacctacaacatgttaaatccgattcttagaattatacaacttagaattaaagaaggttagtcccaccctta 19700208  T
Q  177 cctta 181  Q
    |||||    
T  19700209 cctta 19700213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 78 - 181
Target Start/End: Original strand, 23948211 - 23948315
Alignment:
Q  78 aacctaattcccaaattcccataactacaacctacaacatgctaaactcaattt-cagaattatacaacttagaattagagaaagttagtcccaccctta 176  Q
    |||||||||| ||||| |||| |||||||||||||||| || ||||  || ||| |||||| |||||||||||||||| |||| |||||| |||||||||    
T  23948211 aacctaattctcaaatccccaaaactacaacctacaacttgttaaatccacttttcagaatcatacaacttagaattaaagaaggttagtaccaccctta 23948310  T
Q  177 cctta 181  Q
    |||||    
T  23948311 cctta 23948315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 77 - 182
Target Start/End: Original strand, 17218649 - 17218755
Alignment:
Q  77 aaacctaattcccaaattcccataactacaacctacaacatgctaaa-ctcaatttcagaattatacaacttagaattagagaaagttagtcccaccctt 175  Q
    ||||||||||| ||||| | || ||| |||||||||||  ||||||| || | |||||||||||||  |||||||| |||||||||||||||||||||||    
T  17218649 aaacctaattctcaaatcctcaaaacaacaacctacaaattgctaaatctaattttcagaattataatacttagaactagagaaagttagtcccaccctt 17218748  T
Q  176 accttaa 182  Q
    | |||||    
T  17218749 atcttaa 17218755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 100 - 181
Target Start/End: Original strand, 23419411 - 23419493
Alignment:
Q  100 aactacaacctacaacatgctaaactcaatt-tcagaattatacaacttagaattagagaaagttagtcccacccttacctta 181  Q
    ||||||| ||||||| ||| ||||  ||||| |||||||||||||||||||||||| |||| |||||||||||||||||||||    
T  23419411 aactacatcctacaatatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctta 23419493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 151 - 220
Target Start/End: Original strand, 22345186 - 22345257
Alignment:
Q  151 attagagaaagttagtcccacccttaccttaaattagatgat--cggactctacaagattgctcctcttctc 220  Q
    ||||||||||| ||||||||||||||||||| ||||||||||  | ||||||||||| ||||||||||||||    
T  22345186 attagagaaagctagtcccacccttaccttagattagatgattacagactctacaagcttgctcctcttctc 22345257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 151 - 220
Target Start/End: Original strand, 22356846 - 22356917
Alignment:
Q  151 attagagaaagttagtcccacccttaccttaaattagatgat--cggactctacaagattgctcctcttctc 220  Q
    ||||||||||| ||||||||||||||||||| ||||||||||  | ||||||||||| ||||||||||||||    
T  22356846 attagagaaagctagtcccacccttaccttagattagatgattacagactctacaagcttgctcctcttctc 22356917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 114 - 181
Target Start/End: Complemental strand, 22583727 - 22583660
Alignment:
Q  114 acatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 181  Q
    ||||| |||| ||||||||||||||||||||| |||||||| |||| |||| ||||||||||||||||    
T  22583727 acatgttaaattcaatttcagaattatacaacctagaattaaagaatgttaatcccacccttacctta 22583660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 114 - 181
Target Start/End: Original strand, 23889784 - 23889851
Alignment:
Q  114 acatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 181  Q
    ||||| |||| ||||||||||||||||||||| |||||||||||||||||| || |||||||| ||||    
T  23889784 acatgttaaattcaatttcagaattatacaacctagaattagagaaagttaatctcacccttagctta 23889851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 111 - 182
Target Start/End: Original strand, 36305837 - 36305908
Alignment:
Q  111 acaacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaa 182  Q
    ||||||||||||||||||||||| ||||||||||| || ||||| ||||||||| || ||||||||| ||||    
T  36305837 acaacatgctaaactcaatttcataattatacaacctaaaattaaagaaagttaatcacacccttacgttaa 36305908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 59 - 180
Target Start/End: Complemental strand, 42265631 - 42265510
Alignment:
Q  59 caaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacatgctaaactcaa-tttcagaattatacaacttagaattagag 157  Q
    |||||| || ||||||| || ||||||||||||||||||| |||||||||||||||| || |||| |||| ||||||||| |||  ||| ||| |||       
T  42265631 caaccatttgcaacttctaaccctaattcccaaattcccaaaactacaacctacaacttgttaaattcaattttcagaatcata-tactcagacttatta 42265533  T
Q  158 aaagttagtcccacccttacctt 180  Q
    || ||||||||||||||||||||    
T  42265532 aaggttagtcccacccttacctt 42265510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 105 - 181
Target Start/End: Original strand, 22254741 - 22254818
Alignment:
Q  105 caacctacaacatgctaaactcaattt-cagaattatacaacttagaattagagaaagttagtcccacccttacctta 181  Q
    ||||||||||| || ||||  |||||| ||||||||||  ||||||||||||||||||||||||||||| ||||||||    
T  22254741 caacctacaacttgttaaatccaattttcagaattataacacttagaattagagaaagttagtcccaccattacctta 22254818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 129 - 181
Target Start/End: Original strand, 26454708 - 26454760
Alignment:
Q  129 tttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 181  Q
    ||||||||||| |  ||||||||||||||||||||||||||||||||||||||    
T  26454708 tttcagaattaaaatacttagaattagagaaagttagtcccacccttacctta 26454760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 152 - 220
Target Start/End: Original strand, 23884192 - 23884262
Alignment:
Q  152 ttagagaaagttagtcccacccttaccttaaattagatga--tcggactctacaagattgctcctcttctc 220  Q
    |||||||||| ||||||| ||||||||||| |||||||||  || ||||||||||| ||||||||||||||    
T  23884192 ttagagaaagctagtcccgcccttaccttagattagatgaattcagactctacaagtttgctcctcttctc 23884262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 133 - 220
Target Start/End: Complemental strand, 22610315 - 22610226
Alignment:
Q  133 agaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatga--tcggactctacaagattgctcctcttctc 220  Q
    ||||| |||||||| |  ||||||||||||||||||||||||||||||| ||| | |||  |||||| ||||||| ||| ||||||||||    
T  22610315 agaatcatacaactcattattagagaaagttagtcccacccttaccttagattggttgaattcggaccctacaagcttgttcctcttctc 22610226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 144 - 181
Target Start/End: Complemental strand, 17159000 - 17158963
Alignment:
Q  144 acttagaattagagaaagttagtcccacccttacctta 181  Q
    ||||||||||||||||||||||||||||||||||||||    
T  17159000 acttagaattagagaaagttagtcccacccttacctta 17158963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 133 - 194
Target Start/End: Original strand, 21514695 - 21514756
Alignment:
Q  133 agaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcg 194  Q
    |||||||||||||| |  ||||||||||  |||||||||||||||||||| |||||||||||    
T  21514695 agaattatacaactcattattagagaaatctagtcccacccttaccttaagttagatgatcg 21514756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 144 - 181
Target Start/End: Original strand, 23479097 - 23479134
Alignment:
Q  144 acttagaattagagaaagttagtcccacccttacctta 181  Q
    ||||||||||||||||||||||||||||||||||||||    
T  23479097 acttagaattagagaaagttagtcccacccttacctta 23479134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 145 - 181
Target Start/End: Original strand, 19880838 - 19880874
Alignment:
Q  145 cttagaattagagaaagttagtcccacccttacctta 181  Q
    |||||||||||||||||||||||||||||||||||||    
T  19880838 cttagaattagagaaagttagtcccacccttacctta 19880874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 151 - 220
Target Start/End: Original strand, 20879494 - 20879565
Alignment:
Q  151 attagagaaagttagtcccacccttaccttaaattagatga--tcggactctacaagattgctcctcttctc 220  Q
    |||| |||| ||||||||||||||||||||| ||| | |||  |||||||||||||| ||||||||||||||    
T  20879494 attaaagaaggttagtcccacccttaccttagattggttgaattcggactctacaagtttgctcctcttctc 20879565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 137 - 177
Target Start/End: Original strand, 34758875 - 34758915
Alignment:
Q  137 ttatacaacttagaattagagaaagttagtcccacccttac 177  Q
    ||||||||| |||||||||||||||||||||||||||||||    
T  34758875 ttatacaacgtagaattagagaaagttagtcccacccttac 34758915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 59 - 195
Target Start/End: Original strand, 3273819 - 3273956
Alignment:
Q  59 caaccaattacaacttcaaaacctaatt-cccaaattcccataactacaacctacaacatgctaaactcaa-tttcagaattatacaacttagaattaga 156  Q
    |||||||| |||||||| || ||||||| |||||||||||| |||||||||| ||||| || |||| |||| ||||||||| |||  ||  | |||||      
T  3273819 caaccaatcacaacttctaaccctaatttcccaaattcccaaaactacaacccacaacctgttaaattcaattttcagaatcata-tacacataattatt 3273917  T
Q  157 gaaagttagtcccacccttaccttaaattagatgatcgg 195  Q
     || ||||||||||||||||||||| | | |||||||||    
T  3273918 aaaggttagtcccacccttaccttagaatggatgatcgg 3273956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 120 - 194
Target Start/End: Complemental strand, 36732473 - 36732399
Alignment:
Q  120 taaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcg 194  Q
    |||||||  |||||||||||||||||  |  ||||||||||| ||||| |||||||||||||  |||||||||||    
T  36732473 taaactctttttcagaattatacaacccattattagagaaagctagtcacacccttaccttaggttagatgatcg 36732399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 181
Target Start/End: Original strand, 12577880 - 12577931
Alignment:
Q  129 tttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 181  Q
    |||| ||||||||||||| |  |||||||||||||||||||||||||||||||    
T  12577880 tttcggaattatacaact-attattagagaaagttagtcccacccttacctta 12577931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 177
Target Start/End: Complemental strand, 25657566 - 25657518
Alignment:
Q  129 tttcagaattatacaacttagaattagagaaagttagtcccacccttac 177  Q
    ||||||||||| |  ||||||||||||||||||||| ||||||||||||    
T  25657566 tttcagaattaaaatacttagaattagagaaagttactcccacccttac 25657518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 220
Target Start/End: Original strand, 22483942 - 22484029
Alignment:
Q  133 agaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatga--tcggactctacaagattgctcctcttctc 220  Q
    |||||||||||||| |  ||||||||||||||||||| | ||||||||| ||| | |||  |||||||||| ||| ||||||||||||||    
T  22483942 agaattatacaactcattattagagaaagttagtccc-cgcttaccttagattggttgaattcggactcta-aagcttgctcctcttctc 22484029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 144 - 181
Target Start/End: Original strand, 16198851 - 16198888
Alignment:
Q  144 acttagaattagagaaagttagtcccacccttacctta 181  Q
    ||||||||||||||||||||||||||||  ||||||||    
T  16198851 acttagaattagagaaagttagtcccacttttacctta 16198888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 181
Target Start/End: Complemental strand, 18816347 - 18816295
Alignment:
Q  129 tttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 181  Q
    |||||||||||||||||  |   |||||||||| |||||||||||||||||||    
T  18816347 tttcagaattatacaacccatttttagagaaagctagtcccacccttacctta 18816295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 177
Target Start/End: Original strand, 22483786 - 22483834
Alignment:
Q  129 tttcagaattatacaacttagaattagagaaagttagtcccacccttac 177  Q
    |||||||||||||||||  |  ||||||||||| |||||||||||||||    
T  22483786 tttcagaattatacaacccattattagagaaagctagtcccacccttac 22483834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1633 (Bit Score: 201; Significance: 1e-110; HSPs: 1)
Name: scaffold1633
Description:

Target: scaffold1633; HSP #1
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 16 - 240
Target Start/End: Original strand, 1092 - 1316
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  1092 acatcaattctacacaaattcaacggattttctattctattaacaaccaattacaacttcaaaacctaattcccaaattacaataactacaacctacaac 1191  T
Q  116 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagattgctcctc 215  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| |||    
T  1192 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcggattctacaaaattgctactc 1291  T
Q  216 ttctcacaagattcttctcttctct 240  Q
    |||||||||||||||||||||||||    
T  1292 ttctcacaagattcttctcttctct 1316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 197; Significance: 1e-107; HSPs: 2)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 16 - 240
Target Start/End: Original strand, 34226 - 34450
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  34226 acatcaattctacacaaattcaacaaattttctactctattaacaaccaattacaacttcaaaacctgattcccaaattcccataactacaacctacaac 34325  T
Q  116 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagattgctcctc 215  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||    
T  34326 atgctaaactcaatttcagaattaaacaaattagaattagagaaagttagtcccacccttaccttaaattagatgatcggactctacaaaattgctactc 34425  T
Q  216 ttctcacaagattcttctcttctct 240  Q
    |||||||||||||||||||||||||    
T  34426 ttctcacaagattcttctcttctct 34450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #2
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 100 - 181
Target Start/End: Original strand, 5921 - 6002
Alignment:
Q  100 aactacaacctacaacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 181  Q
    ||||||| ||||||||||| |||| |||||||||||||||||||||||||||||| |||| |||||||||||||||||||||    
T  5921 aactacatcctacaacatgttaaattcaatttcagaattatacaacttagaattaaagaaggttagtcccacccttacctta 6002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0407 (Bit Score: 194; Significance: 1e-105; HSPs: 1)
Name: scaffold0407
Description:

Target: scaffold0407; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 16 - 241
Target Start/End: Complemental strand, 11439 - 11215
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  11439 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacttaattcccaaattcccataactacaacctacaac 11340  T
Q  116 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagattgctcctc 215  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||| || ||     
T  11339 atgctaaactcaatttcagaaatatacaacttagaattagagaaagttagtctcacccttaccttaaattagatgatcggactctacaacattact-ctt 11241  T
Q  216 ttctcacaagattcttctcttctctg 241  Q
    ||||||||||||||||||||||||||    
T  11240 ttctcacaagattcttctcttctctg 11215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 189; Significance: 1e-102; HSPs: 2)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 16 - 236
Target Start/End: Complemental strand, 21958 - 21738
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    ||||||||||||||||||||||||  ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  21958 acatcaattctacacaaattcaacttattttttactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataaatacaacctacaac 21859  T
Q  116 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagattgctcctc 215  Q
    |||||||| |||||||||||| ||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  21858 atgctaaattcaatttcagaactatacaacttagaattagagaaatttagtcccaccattaccttaaattagatgatcggactctacaagattgctcctc 21759  T
Q  216 ttctcacaagattcttctctt 236  Q
    |||||||||||||||||||||    
T  21758 ttctcacaagattcttctctt 21738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 188 - 241
Target Start/End: Complemental strand, 58880 - 58827
Alignment:
Q  188 atgatcggactctacaagattgctcctcttctcacaagattcttctcttctctg 241  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  58880 atgatcggactctacaagattactcctcttctcacaagattcttctcttctctg 58827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 168; Significance: 4e-90; HSPs: 2)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 21 - 208
Target Start/End: Complemental strand, 12693 - 12506
Alignment:
Q  21 aattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacatgct 120  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  12693 aattctatacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctataacatgct 12594  T
Q  121 aaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagatt 208  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||  ||||||||||||||||||||||||||    
T  12593 aaactcaatttcagaattatacaacttagaattagagaaagttattcccacccttaccttggattagatgatcggactctacaagatt 12506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111; HSP #2
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 16 - 178
Target Start/End: Original strand, 5270 - 5432
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  5270 acatcaattctacacaaattcaaaggattttctactctattaacaaccaattacgacttcaaaacctaattcccaaattcccataactacaacctacaac 5369  T
Q  116 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttacc 178  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5370 atgctaaacttaatttcagaattatacaacttagaattagagaaagttagtcccacccttacc 5432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 165; Significance: 2e-88; HSPs: 2)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 77 - 241
Target Start/End: Complemental strand, 24235 - 24071
Alignment:
Q  77 aaacctaattcccaaattcccataactacaacctacaacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccaccctta 176  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24235 aaacctaattcccaaattcccataactacaacctacaacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccaccctta 24136  T
Q  177 ccttaaattagatgatcggactctacaagattgctcctcttctcacaagattcttctcttctctg 241  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24135 ccttaaattagatgatcggactctacaagattgctcctcttctcacaagattcttctcttctctg 24071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 81 - 180
Target Start/End: Original strand, 30023 - 30122
Alignment:
Q  81 ctaattcccaaattcccataactacaacctacaacatgctaaactcaattt-cagaattatacaacttagaattagagaaagttagtcccacccttacct 179  Q
    ||||||||||||| | || ||||| ||||||||||||| ||||  |||||| |||||||| |  ||||||| |||  ||| |||||||||||||||||||    
T  30023 ctaattcccaaatcctcaaaacta-aacctacaacatgttaaatacaattttcagaattaaaacacttagatttattgaaggttagtcccacccttacct 30121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1941 (Bit Score: 162; Significance: 1e-86; HSPs: 1)
Name: scaffold1941
Description:

Target: scaffold1941; HSP #1
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 16 - 181
Target Start/End: Original strand, 25 - 190
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 124  T
Q  116 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 181  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  125 atgttaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 161; Significance: 6e-86; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 161; E-Value: 6e-86
Query Start/End: Original strand, 16 - 208
Target Start/End: Complemental strand, 21300209 - 21300017
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||    
T  21300209 acatcaattctacacaaatttaacagattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattcccataactactacctacaac 21300110  T
Q  116 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagatt 208  Q
    |||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||    
T  21300109 atgctaaacttaatttcagaattatacaacttaaaattagagaaagttagtcccacccttaccttagattagatgatcagactctacaagatt 21300017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 16 - 217
Target Start/End: Original strand, 19921525 - 19921732
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    |||||||||||||||||||||||| |||||||||||||||||||||| ||||| ||||||||||||||||||||||||| |||||| |||||||||||||    
T  19921525 acatcaattctacacaaattcaacagattttctactctattaacaactaattataacttcaaaacctaattcccaaatttccataattacaacctacaac 19921624  T
Q  116 atgctaaactcaatttcagaattatacaacttagaattagagaaagttag------tcccacccttaccttaaattagatgatcggactctacaagattg 209  Q
    ||| |||||||||||||||||||||||||||||||||||||||||| |||      |||||||||||||||| ||||||||||||| |||||| ||||||    
T  19921625 atgttaaactcaatttcagaattatacaacttagaattagagaaaggtagtcccactcccacccttaccttagattagatgatcggtctctacgagattg 19921724  T
Q  210 ctcctctt 217  Q
    ||| ||||    
T  19921725 ctcatctt 19921732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 30 - 177
Target Start/End: Original strand, 7484903 - 7485050
Alignment:
Q  30 caaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacatgctaaactcaat 129  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||    
T  7484903 caaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattctcataactacaacctacaacatgctaaactcaat 7485002  T
Q  130 ttcagaattatacaacttagaattagagaaagttagtcccacccttac 177  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||    
T  7485003 ttcagaattatacaacgtagaattagagaaagttagtcccacccttac 7485050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 20 - 181
Target Start/End: Original strand, 20566445 - 20566598
Alignment:
Q  20 caattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacatgc 119  Q
    ||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||||||    
T  20566445 caattctacacaaattctacggattttctattctattaacaaccaattacaacttcaaaacctaatt--------cccataactacaacctacaacatgc 20566536  T
Q  120 taaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 181  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||    
T  20566537 taaactcaatttcagaattatacaactttgaattagagaaagttagtctcacccttacctta 20566598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 32 - 190
Target Start/End: Original strand, 31622028 - 31622178
Alignment:
Q  32 aattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacatgctaaactcaattt 131  Q
    ||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||        ||||| | |||||||||||||||||||||    
T  31622028 aattcaatggattttctactctattaacaaccaattacgacttcaaaacctaattcccaaatt--------tacaaacaacaacatgctaaactcaattt 31622119  T
Q  132 cagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatg 190  Q
    |||||||||||||| || ||||||||||||||| |||||||||||||||| ||||||||    
T  31622120 cagaattatacaacctaaaattagagaaagttaatcccacccttaccttagattagatg 31622178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 129 - 240
Target Start/End: Complemental strand, 23199259 - 23199148
Alignment:
Q  129 tttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagattgctcctcttctcacaagatt 228  Q
    |||||||||||||||||  |  ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  23199259 tttcagaattatacaacccattattagagaaagctagtcccacccttaccttaaattagatgatcggactctacaagattgctcttcttctcacaagatt 23199160  T
Q  229 cttctcttctct 240  Q
    ||||||||||||    
T  23199159 cttctcttctct 23199148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 57 - 186
Target Start/End: Complemental strand, 36508757 - 36508628
Alignment:
Q  57 aacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacatgctaaactcaatttcagaattatacaacttagaattaga 156  Q
    ||||||||||||||||||| |||| ||||||||||||| ||| ||||||||||||| || || ||||  || ||||||||| ||||||||||||||||||    
T  36508757 aacaaccaattacaacttctaaacataattcccaaatttccaaaactacaacctaccacctgttaaatccattttcagaatcatacaacttagaattaga 36508658  T
Q  157 gaaagttagtcccacccttaccttaaatta 186  Q
    ||||||||||| ||||||||||||||||||    
T  36508657 gaaagttagtctcacccttaccttaaatta 36508628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 151 - 241
Target Start/End: Complemental strand, 21398674 - 21398584
Alignment:
Q  151 attagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagattgctcctcttctcacaagattcttctcttctctg 241  Q
    ||||||||||| || |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21398674 attagagaaagctaatcccacccttaccttagattagatgatcggactctacaagattgctcctcttctcacaagattcttctcttctctg 21398584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 63 - 181
Target Start/End: Complemental strand, 21618047 - 21617928
Alignment:
Q  63 caattacaacttcaaaacctaattcccaaattcccataactacaacctacaacatgctaaactcaatttc-agaattatacaacttagaattagagaaag 161  Q
    ||||| ||||||| || |||||||| |||||||||| |||||||||||||||| || |||| |||||||  ||| |||||  ||||||||||||||||||    
T  21618047 caatttcaacttctaaccctaattctcaaattcccaaaactacaacctacaacttgttaaattcaatttttagagttatatcacttagaattagagaaag 21617948  T
Q  162 ttagtcccacccttacctta 181  Q
    ||||||||||||||||||||    
T  21617947 ttagtcccacccttacctta 21617928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 57 - 181
Target Start/End: Original strand, 31456888 - 31457012
Alignment:
Q  57 aacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacatgctaaactcaatttcagaattatacaacttagaattaga 156  Q
    ||||||||||||||||||| |||||||||| ||||||| ||| |||||||||||||    || ||||  || ||||||||| |||| ||||| |||||||    
T  31456888 aacaaccaattacaacttctaaacctaatttccaaatttccaaaactacaacctaccttgtgttaaatccagtttcagaatcataccacttaaaattaga 31456987  T
Q  157 gaaagttagtcccacccttacctta 181  Q
    ||||||||||| |||||||||||||    
T  31456988 gaaagttagtctcacccttacctta 31457012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 63 - 182
Target Start/End: Original strand, 22111762 - 22111881
Alignment:
Q  63 caattacaacttcaaaacctaattcccaaattcccataactacaacctacaacatgctaaactcaatttcagaattatacaacttagaattagagaaagt 162  Q
    ||||||| |||| |||||||||||| ||||||| || |   |||| | ||||||||||||||||||||||| |||||||||||  | |||||||||||||    
T  22111762 caattacgacttgaaaacctaattctcaaattcgcaaattcacaaacaacaacatgctaaactcaatttcaaaattatacaaccaaaaattagagaaagt 22111861  T
Q  163 tagtcccacccttaccttaa 182  Q
    || |||||||||||| ||||    
T  22111862 taatcccacccttacgttaa 22111881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 77 - 181
Target Start/End: Complemental strand, 20469281 - 20469176
Alignment:
Q  77 aaacctaattcccaaattcccataactacaacctacaacatgctaaactcaattt-cagaattatacaacttagaattagagaaagttagtcccaccctt 175  Q
    ||||||||||| ||| | |||| |||||||||||||||| || ||||  |||||| |||| |||||  ||||||||||||||||||||||||||||||||    
T  20469281 aaacctaattctcaagtccccaaaactacaacctacaacttgttaaatccaattttcagagttatatcacttagaattagagaaagttagtcccaccctt 20469182  T
Q  176 acctta 181  Q
    ||||||    
T  20469181 acctta 20469176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 151 - 241
Target Start/End: Original strand, 26762424 - 26762514
Alignment:
Q  151 attagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagattgctcctcttctcacaagattcttctcttctctg 241  Q
    |||| |||| |||||||||||||||||||||  |||   ||||| |||||||||||||||| ||||||||||||||||||| |||||||||    
T  26762424 attaaagaaggttagtcccacccttaccttaggttaatcgatcgaactctacaagattgcttctcttctcacaagattcttttcttctctg 26762514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 129 - 181
Target Start/End: Complemental strand, 6551342 - 6551290
Alignment:
Q  129 tttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 181  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  6551342 tttcagaattatacaacttagaattagagaaagttagtctcacccttacctta 6551290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 78 - 181
Target Start/End: Original strand, 10954038 - 10954141
Alignment:
Q  78 aacctaattcccaaattcccataactacaacctacaacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttac 177  Q
    ||||||||||  ||||  ||| ||||||| ||||||||||| ||||  |||||||| ||||| ||||||||||||||  ||| |||||||||||||||||    
T  10954038 aacctaattcttaaatctccaaaactacatcctacaacatgttaaatccaatttcataattacacaacttagaattaaggaaggttagtcccacccttac 10954137  T
Q  178 ctta 181  Q
    ||||    
T  10954138 ctta 10954141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 151 - 217
Target Start/End: Complemental strand, 32607346 - 32607280
Alignment:
Q  151 attagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagattgctcctctt 217  Q
    ||||||||||| ||||||||||||||||||| ||||||| ||||| |||||| ||||||||||||||    
T  32607346 attagagaaagctagtcccacccttaccttagattagataatcggtctctacgagattgctcctctt 32607280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 73 - 181
Target Start/End: Complemental strand, 10774771 - 10774664
Alignment:
Q  73 ttcaaaacctaattcccaaattcccataactacaacctacaacatgctaaactcaattt-cagaattatacaacttagaattagagaaagttagtcccac 171  Q
    |||||| |||||||||| ||||| || |||||||| ||||| |||| |||| ||||||| |||||| ||||| ||||||||||| ||| |||||||||||    
T  10774771 ttcaaaccctaattcccgaattcacaaaactacaatctaca-catgttaaattcaattttcagaatcataca-cttagaattagtgaaggttagtcccac 10774674  T
Q  172 ccttacctta 181  Q
    ||||||||||    
T  10774673 ccttacctta 10774664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 58 - 194
Target Start/End: Original strand, 17876132 - 17876268
Alignment:
Q  58 acaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacatgctaaactcaa-tttcagaattatacaacttagaattaga 156  Q
    |||||||||||||||||| ||||||||||||||||||  || ||||||||||||| || || ||||  ||| ||||||||| |||  ||| |||||||      
T  17876132 acaaccaattacaacttctaaacctaattcccaaattttcagaactacaacctaccacctgttaaatccaattttcagaatcata-tactcagaattatt 17876230  T
Q  157 gaaagttagtcccacccttaccttaaattagatgatcg 194  Q
    ||| ||||||  ||||||||| ||| ||||||||||||    
T  17876231 gaaggttagtttcacccttacattagattagatgatcg 17876268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 129 - 195
Target Start/End: Original strand, 30616614 - 30616680
Alignment:
Q  129 tttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcgg 195  Q
    ||||||||| |||||||||||||||||||||||| ||||||||||||||| |||  | |||||||||    
T  30616614 tttcagaatcatacaacttagaattagagaaagtcagtcccacccttaccataatattgatgatcgg 30616680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 129 - 182
Target Start/End: Original strand, 266038 - 266091
Alignment:
Q  129 tttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaa 182  Q
    ||||||||||| |  |||||||||||||||||||||||||||||||||||||||    
T  266038 tttcagaattaaattacttagaattagagaaagttagtcccacccttaccttaa 266091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 156 - 220
Target Start/End: Complemental strand, 8503913 - 8503849
Alignment:
Q  156 agaaagttagtcccacccttaccttaaattagatgatcggactctacaagattgctcctcttctc 220  Q
    |||| ||||||||||||||||||||| ||||||| ||||| |||||| ||||||||||| |||||    
T  8503913 agaaggttagtcccacccttaccttatattagataatcggtctctacgagattgctcctattctc 8503849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 129 - 181
Target Start/End: Original strand, 17011728 - 17011780
Alignment:
Q  129 tttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 181  Q
    ||||||||||| |  ||||||||||||||||||||||||||||||||||||||    
T  17011728 tttcagaattaaaatacttagaattagagaaagttagtcccacccttacctta 17011780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 59 - 181
Target Start/End: Complemental strand, 21405751 - 21405628
Alignment:
Q  59 caaccaattacaacttcaaaacctaatt-cccaaattcccataactacaacctacaacatgctaaactcaa-tttcagaattatacaacttagaattaga 156  Q
    ||||||||||||||||| || ||||||| |||||||||||| |||||||||| ||||| || |||| |||| ||||||||| |||  ||| |||||||      
T  21405751 caaccaattacaacttctaaccctaatttcccaaattcccaaaactacaacccacaacctgttaaattcaattttcagaatcata-tactcagaattatt 21405653  T
Q  157 gaaagttagtcccacccttacctta 181  Q
     || ||||||| |||||||||||||    
T  21405652 aaaggttagtctcacccttacctta 21405628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 61 - 141
Target Start/End: Complemental strand, 31252011 - 31251931
Alignment:
Q  61 accaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacatgctaaactcaatttcagaattata 141  Q
    |||||||| |||||| ||||||||||| |||||||| | |||||||||||| ||| || ||||  ||||||||||||||||    
T  31252011 accaattataacttctaaacctaattctcaaattcctaaaactacaacctataacctgttaaatccaatttcagaattata 31251931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 100 - 181
Target Start/End: Complemental strand, 25249910 - 25249828
Alignment:
Q  100 aactacaacctacaacatgctaaactcaattt-cagaattatacaacttagaattagagaaagttagtcccacccttacctta 181  Q
    ||||| ||||||||||||| ||||  |||||| |||||||||| |||||| ||||| |||| |||||||| ||||||||||||    
T  25249910 aactataacctacaacatgttaaatccaattttcagaattatataacttaaaattaaagaaggttagtcctacccttacctta 25249828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 100 - 181
Target Start/End: Complemental strand, 25313694 - 25313612
Alignment:
Q  100 aactacaacctacaacatgctaaactcaattt-cagaattatacaacttagaattagagaaagttagtcccacccttacctta 181  Q
    ||||| ||||||||||||| ||||  |||||| |||||||||| |||||| ||||| |||| |||||||| ||||||||||||    
T  25313694 aactataacctacaacatgttaaatccaattttcagaattatataacttaaaattaaagaaggttagtcctacccttacctta 25313612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 129 - 181
Target Start/End: Original strand, 18744874 - 18744926
Alignment:
Q  129 tttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 181  Q
    |||||||||||||||||  |  |||||||||||||||||||||||||||||||    
T  18744874 tttcagaattatacaacccattattagagaaagttagtcccacccttacctta 18744926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 133 - 220
Target Start/End: Original strand, 16063755 - 16063844
Alignment:
Q  133 agaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatga--tcggactctacaagattgctcctcttctc 220  Q
    |||||||||||||  |  ||||||||||| ||||||||||||||||||| ||| | |||   | ||||||||||| ||||||||||||||    
T  16063755 agaattatacaacccattattagagaaaggtagtcccacccttaccttagattggttgaatacagactctacaagcttgctcctcttctc 16063844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 28 - 77
Target Start/End: Original strand, 22111715 - 22111764
Alignment:
Q  28 cacaaattcaacggattttctactctattaacaaccaattacaacttcaa 77  Q
    ||||||||||  ||||||||| |||||||||||||||||||| |||||||    
T  22111715 cacaaattcattggattttctgctctattaacaaccaattacgacttcaa 22111764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 151 - 220
Target Start/End: Original strand, 21504161 - 21504232
Alignment:
Q  151 attagagaaagttagtcccacccttaccttaaattagatga--tcggactctacaagattgctcctcttctc 220  Q
    |||| |||| |||||||||||| |||||||| ||| | |||  |||||||||||||| ||||||||||||||    
T  21504161 attaaagaaggttagtcccacctttaccttagattggttgaattcggactctacaagcttgctcctcttctc 21504232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 151 - 194
Target Start/End: Complemental strand, 14025837 - 14025794
Alignment:
Q  151 attagagaaagttagtcccacccttaccttaaattagatgatcg 194  Q
    |||| |||| ||||||||||||||||||||| ||||||||||||    
T  14025837 attaaagaaggttagtcccacccttaccttagattagatgatcg 14025794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 57 - 96
Target Start/End: Complemental strand, 30138098 - 30138059
Alignment:
Q  57 aacaaccaattacaacttcaaaacctaattcccaaattcc 96  Q
    ||||||||||||||||||| ||||||||||||||| ||||    
T  30138098 aacaaccaattacaacttctaaacctaattcccaatttcc 30138059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 133 - 182
Target Start/End: Complemental strand, 1627115 - 1627066
Alignment:
Q  133 agaattatacaacttagaattagagaaagttagtcccacccttaccttaa 182  Q
    |||||||||||||| |  ||||||||||| ||||||||||||||| ||||    
T  1627115 agaattatacaactcattattagagaaagctagtcccacccttacgttaa 1627066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 181
Target Start/End: Original strand, 29448840 - 29448892
Alignment:
Q  129 tttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 181  Q
    ||||||||||| |  |||||||||||||||||||||||| || | ||||||||    
T  29448840 tttcagaattaaattacttagaattagagaaagttagtctcatcattacctta 29448892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 158; Significance: 4e-84; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 68 - 241
Target Start/End: Complemental strand, 78298 - 78125
Alignment:
Q  68 acaacttcaaaacctaattcccaaattcccataactacaacctacaacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtc 167  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  78298 acaacttcaaaacctaatttccaaattcccataactacaacctacaacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtc 78199  T
Q  168 ccacccttaccttaaattagatgatcggactctacaagattgctcctcttctcacaagattcttctcttctctg 241  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||| ||||    
T  78198 ccacccttaccttaaattagatgatcgtactctacaagattgctcctcttctcacaagattattctcttatctg 78125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1766 (Bit Score: 154; Significance: 9e-82; HSPs: 1)
Name: scaffold1766
Description:

Target: scaffold1766; HSP #1
Raw Score: 154; E-Value: 9e-82
Query Start/End: Original strand, 16 - 181
Target Start/End: Complemental strand, 861 - 696
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  861 acatcaattctacacaaattcaacggattttctactctattaacaactaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 762  T
Q  116 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 181  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  761 atgttaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccctacctta 696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0241 (Bit Score: 154; Significance: 9e-82; HSPs: 2)
Name: scaffold0241
Description:

Target: scaffold0241; HSP #1
Raw Score: 154; E-Value: 9e-82
Query Start/End: Original strand, 16 - 181
Target Start/End: Original strand, 3069 - 3234
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3069 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 3168  T
Q  116 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 181  Q
    || ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  3169 atactaaagtcaatttcagaattatacaacttagaattagagaaagttagtccaacccttacctta 3234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0241; HSP #2
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 16 - 123
Target Start/End: Original strand, 2451 - 2558
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2451 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 2550  T
Q  116 atgctaaa 123  Q
    ||||||||    
T  2551 atgctaaa 2558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 154; Significance: 9e-82; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 154; E-Value: 9e-82
Query Start/End: Original strand, 16 - 181
Target Start/End: Complemental strand, 13557 - 13392
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||    
T  13557 acatcaattctacacaaattcaacggattttctactctattaacaaccaattataacttcaaaacctaattcccaaattcccaaaactacaacctacaac 13458  T
Q  116 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 181  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  13457 atgctaaactcaatttcagaattatacaacttggaattagagaaagttagtcccacccttacctta 13392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 154; Significance: 9e-82; HSPs: 3)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 154; E-Value: 9e-82
Query Start/End: Original strand, 16 - 181
Target Start/End: Complemental strand, 169164 - 168999
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  169164 acatcaattctacacaaattcaacggattttctactctattaacaactaattacaagttcaaaacctaattcccaaattcccataactacaacctacaac 169065  T
Q  116 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 181  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  169064 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccctacctta 168999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #2
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 16 - 185
Target Start/End: Original strand, 143498 - 143667
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||   ||||||||||||||||||    
T  143498 acatcaattctacacaaattcaacgaattttctactctattaacaaccaattacaacttcaaaacataattcccaaattaaaataactacaacctacaac 143597  T
Q  116 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaatt 185  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  143598 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcacacccttaccttaaatt 143667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 151 - 241
Target Start/End: Original strand, 174243 - 174333
Alignment:
Q  151 attagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagattgctcctcttctcacaagattcttctcttctctg 241  Q
    |||| |||| ||||||||||||||||| |||  |||   ||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  174243 attaaagaaggttagtcccacccttactttaggttaatcgatcgaactctacaagattgctcctcttctcacaagattcttctcttctctg 174333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334 (Bit Score: 150; Significance: 2e-79; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 16 - 181
Target Start/End: Original strand, 405 - 570
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||    
T  405 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaatttccaaattctcataactacaacctacaac 504  T
Q  116 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 181  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||    
T  505 atgctaaactcaatttcagaatgatacaacttagaattagagaaagttagtctcacccttacctta 570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 150; Significance: 2e-79; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 16 - 181
Target Start/End: Original strand, 146610 - 146775
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  146610 acatcaattctacacaaattcaacggatttcctactctattaacaaccaattataacttcaaaacctaattcccaaattcccataactacaacctacaac 146709  T
Q  116 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 181  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||    
T  146710 atgctaaactcaatttcagaattatacaacttagaattagagtaagttagtcccacccatacctta 146775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 143; Significance: 3e-75; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 20 - 241
Target Start/End: Original strand, 78955 - 79161
Alignment:
Q  20 caattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacatgc 119  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||        |||||||       |||||||    
T  78955 caattctacacaaattcaatggattttctactttattaacaaccaattacaacttcaaaacctaattccca--------taactac-------aacatgc 79039  T
Q  120 taaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagattgctcctcttct 219  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  79040 taaactcaatttcagaattatacaacttagaattagagaaagttagtctcacccttaccttaaattagatgatcgaactctacaagattgctcctcttct 79139  T
Q  220 cacaagattcttctcttctctg 241  Q
    ||||| |||||| |||||||||    
T  79140 cacaaaattcttatcttctctg 79161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0632 (Bit Score: 142; Significance: 1e-74; HSPs: 1)
Name: scaffold0632
Description:

Target: scaffold0632; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 16 - 181
Target Start/End: Original strand, 1052 - 1217
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  1052 acatcaattctacacaaattcaacggattttctattctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctaaaac 1151  T
Q  116 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 181  Q
    |||||||| |||||||||||||||||||||||||||||||  |||||||||| |||||||||||||    
T  1152 atgctaaattcaatttcagaattatacaacttagaattaggaaaagttagtcacacccttacctta 1217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 142; Significance: 1e-74; HSPs: 7)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 16 - 194
Target Start/End: Complemental strand, 328455 - 328275
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 115  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||| || ||||    
T  328455 acatcaattctacacaaattcaactgattttctactctattaacaaccaattacaacttcgaaacctaattcccaaatttccataactacaatcttcaac 328356  T
Q  116 atgctaaactcaatttcagaattatacaactt--agaattagagaaagttagtcccacccttaccttaaattagatgatcg 194  Q
    ||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||  |||||||||||    
T  328355 atgctaaactcaatttcagaattatacaacttagagaattagagaaagttagtcccacccttaccttaggttagatgatcg 328275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 28 - 182
Target Start/End: Original strand, 75691 - 75839
Alignment:
Q  28 cacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacatgctaaactca 127  Q
    ||||||||||| |||||||||| |||||||||||||||||||||      |||||||||||||||||| || |  ||||| | ||||||||||| |||||    
T  75691 cacaaattcaatggattttctattctattaacaaccaattacaa------aacctaattcccaaattcacaaatttacaaacaacaacatgctacactca 75784  T
Q  128 atttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaa 182  Q
    |||||||||||||||||| ||  |||||||||||||| |||||||||||| ||||    
T  75785 atttcagaattatacaacctaagattagagaaagttaatcccacccttacgttaa 75839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 26 - 182
Target Start/End: Original strand, 72841 - 72989
Alignment:
Q  26 tacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacatgctaaact 125  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||| |||||||        || | | ||||||| |||||||    
T  72841 tacacaaattcaatggattttctattctattaacaaccaattacaacttcaaaacctaattcacaaattc--------actaacaacaacatactaaact 72932  T
Q  126 caatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaa 182  Q
    |||||| ||||||||||||| ||  ||| |||||||||| |||||||| ||| ||||    
T  72933 caattttagaattatacaacctaagattggagaaagttaatcccacccatacgttaa 72989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 77 - 182
Target Start/End: Original strand, 110121 - 110227
Alignment:
Q  77 aaacctaattcccaaattcccataactacaacctacaacatgctaaactcaattt-cagaattatacaacttagaattagagaaagttagtcccaccctt 175  Q
    ||||||||| | ||||| |||| |||||||||||||||| || |||| ||||||| ||||||||||  |||||||||||||||||||||||| |||||||    
T  110121 aaacctaatcctcaaatccccaaaactacaacctacaacttgttaaattcaattttcagaattatatcacttagaattagagaaagttagtctcaccctt 110220  T
Q  176 accttaa 182  Q
    || ||||    
T  110221 acgttaa 110227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 111 - 220
Target Start/End: Original strand, 73069 - 73180
Alignment:
Q  111 acaacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatg--atcggactctacaagatt 208  Q
    |||||||| ||||| |  ||| ||||| |||||||| |  ||||||||||||||||||||||||||||||| ||||||||   || ||||||||||| ||    
T  73069 acaacatgttaaacccctttttagaatcatacaactcattattagagaaagttagtcccacccttaccttacattagatggtttcagactctacaagctt 73168  T
Q  209 gctcctcttctc 220  Q
    ||||||||||||    
T  73169 gctcctcttctc 73180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 220
Target Start/End: Complemental strand, 66124 - 66032
Alignment:
Q  129 tttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgat--cggactctacaagattgctcctcttctc 220  Q
    |||||||||||||||||  |  |||| |||||  ||||||||||||||||||| | ||||||||  ||||||||| ||| ||||| ||||||||    
T  66124 tttcagaattatacaacccattattaaagaaatctagtcccacccttaccttagaatagatgattccggactcta-aagcttgctgctcttctc 66032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 220
Target Start/End: Original strand, 75963 - 76030
Alignment:
Q  155 gagaaagttagtcccacccttaccttaaattagatg--atcggactctacaagattgctcctcttctc 220  Q
    ||||||| ||||||||||||||||||| ||||||||   || ||||||||||| || || ||||||||    
T  75963 gagaaagctagtcccacccttaccttagattagatggtttcagactctacaagcttacttctcttctc 76030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0956 (Bit Score: 127; Significance: 1e-65; HSPs: 1)
Name: scaffold0956
Description:

Target: scaffold0956; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 98 - 240
Target Start/End: Original strand, 2524 - 2666
Alignment:
Q  98 ataactacaacctacaacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcggac 197  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| |    
T  2524 ataactacaacctacaacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccgtagattagatgatcggtc 2623  T
Q  198 tctacaagattgctcctcttctcacaagattcttctcttctct 240  Q
    ||||| |||||||||||||||||||||||||||||||||||||    
T  2624 tctacgagattgctcctcttctcacaagattcttctcttctct 2666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 120; Significance: 2e-61; HSPs: 2)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 42 - 181
Target Start/End: Complemental strand, 29711 - 29573
Alignment:
Q  42 attttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacatgctaaactcaatttcagaattata 141  Q
    ||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  29711 attttctac-ctatttacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacgacatgctaaactcaatttcagaattata 29613  T
Q  142 caacttagaattagagaaagttagtcccacccttacctta 181  Q
    ||||||||||||| ||||||||||||||||||||||||||    
T  29612 caacttagaattatagaaagttagtcccacccttacctta 29573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 57 - 181
Target Start/End: Original strand, 21539 - 21663
Alignment:
Q  57 aacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacatgctaaactcaatttcagaattatacaacttagaattaga 156  Q
    ||||||||||||||||||| |||| ||||||||||||| ||| |||||||| |||| |  || ||||  || |||| |||| ||||||||||||||||||    
T  21539 aacaaccaattacaacttctaaacataattcccaaatttccaaaactacaagctaccatctgttaaatccagtttctgaatcatacaacttagaattaga 21638  T
Q  157 gaaagttagtcccacccttacctta 181  Q
    ||||| |||||||||||||||||||    
T  21639 gaaagctagtcccacccttacctta 21663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0285 (Bit Score: 105; Significance: 2e-52; HSPs: 1)
Name: scaffold0285
Description:

Target: scaffold0285; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 20 - 181
Target Start/End: Original strand, 19652 - 19805
Alignment:
Q  20 caattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacatgc 119  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||        ||| |||||||| |||    
T  19652 caattctacacaaattcaatggattttctactctattaacaaccaattacaacttaaaaacctaattcccaaattc--------acagcctacaacttgc 19743  T
Q  120 taaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 181  Q
    |||||||||||| |||||||||||||||||||||||||||||| |||| |||||||||||||    
T  19744 taaactcaatttgagaattatacaacttagaattagagaaagtcagtctcacccttacctta 19805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 104; Significance: 6e-52; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 55 - 181
Target Start/End: Original strand, 35418 - 35542
Alignment:
Q  55 ttaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacatgctaaactcaatttcagaattatacaacttagaatta 154  Q
    ||||||||||||||| |||||||||||||||||||||||||||| |||||  ||||||||||||||||||||||||||||||||||||||||||||||||    
T  35418 ttaacaaccaattacgacttcaaaacctaattcccaaattcccaaaacta--acctacaacatgctaaactcaatttcagaattatacaacttagaatta 35515  T
Q  155 gagaaagttagtcccacccttacctta 181  Q
    ||||||||||||| |||||||||||||    
T  35516 gagaaagttagtctcacccttacctta 35542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213 (Bit Score: 98; Significance: 2e-48; HSPs: 1)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 129 - 238
Target Start/End: Original strand, 19207 - 19316
Alignment:
Q  129 tttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagattgctcctcttctcacaagatt 228  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||| ||||||||||||||||||||||||||||||||||||||    
T  19207 tttcagaattatacaacttagaattagagaaagttagtcccacccttacgttagattagatcatcggactctacaagattgctcctcttctcacaagatt 19306  T
Q  229 cttctcttct 238  Q
    ||||||||||    
T  19307 cttctcttct 19316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0431 (Bit Score: 89; Significance: 5e-43; HSPs: 1)
Name: scaffold0431
Description:

Target: scaffold0431; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 129 - 241
Target Start/End: Original strand, 5633 - 5745
Alignment:
Q  129 tttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagattgctcctcttctcacaagatt 228  Q
    |||||||||||||||||  |  ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  5633 tttcagaattatacaacccattattagagaaagctagtcccacccttaccttaaattagatgatcggactctacaagattgctcttcttctcacaagatt 5732  T
Q  229 cttctcttctctg 241  Q
    |||||||||||||    
T  5733 cttctcttctctg 5745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 84; Significance: 5e-40; HSPs: 3)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 21 - 181
Target Start/End: Complemental strand, 113127 - 112966
Alignment:
Q  21 aattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacatgct 120  Q
    |||||||||| ||||||||  |||||||||| | | ||||||||||||||||||| |||||||||||||||||||||| || ||||||||||||| || |    
T  113127 aattctacaccaattcaacaaattttctactgt-taaacaaccaattacaacttctaaacctaattcccaaattcccaaaattacaacctacaacttgtt 113029  T
Q  121 aaactcaa--tttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 181  Q
    ||| ||||  ||||||| |||||  ||||||||||||||||||||||||||||||||| ||||    
T  113028 aaattcaatttttcagagttatatcacttagaattagagaaagttagtcccacccttatctta 112966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 63 - 182
Target Start/End: Original strand, 81501 - 81620
Alignment:
Q  63 caattacaacttcaaaacctaattcccaaattcccataactacaacctacaacatgctaaactcaatttc-agaattatacaacttagaattagagaaag 161  Q
    ||||||||||||| |||||||||||||||||||||| |||||||||||||||| || |||| |||||||  ||||| || ||  |||||||||| ||| |    
T  81501 caattacaacttctaaacctaattcccaaattcccaaaactacaacctacaacctgttaaattcaatttttagaatcatccat-ttagaattagtgaagg 81599  T
Q  162 ttagtcccacccttaccttaa 182  Q
    |||||||||||||||||||||    
T  81600 ttagtcccacccttaccttaa 81620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 21 - 181
Target Start/End: Complemental strand, 117960 - 117807
Alignment:
Q  21 aattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacatgct 120  Q
    |||||||| | |||||||  ||||||||||| | | ||||||||||||||||||| |||||||||||||||| |        ||||| || |||| || |    
T  117960 aattctacgccaattcaatagattttctactgt-taaacaaccaattacaacttctaaacctaattcccaaaat--------tacaatcttcaacttgtt 117870  T
Q  121 aaactcaattt--cagaattatacaacttagaattagagaaagttagtcccacccttacctta 181  Q
    ||| |||||||  |||| |||||  ||||||||||||||||||||||||||||||||||||||    
T  117869 aaattcaatttttcagagttatatcacttagaattagagaaagttagtcccacccttacctta 117807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112 (Bit Score: 82; Significance: 8e-39; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 20 - 181
Target Start/End: Original strand, 2787 - 2941
Alignment:
Q  20 caattctacacaaattcaacggattttctactctattaacaaccaatt-acaacttcaaaacctaattcccaaattcccataactacaacctacaacatg 118  Q
    ||||| ||||||||||||| |||||||||| ||||||||||||||||| || | ||||||||||||||| |||||||        |||| | ||||||||    
T  2787 caattatacacaaattcaaaggattttctattctattaacaaccaatttactaattcaaaacctaattcacaaattc--------acaaacaacaacatg 2878  T
Q  119 ctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 181  Q
    ||||||||||||||||||||||||||| || ||||||||||||||| ||||||||||||||||    
T  2879 ctaaactcaatttcagaattatacaacctaaaattagagaaagttaatcccacccttacctta 2941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 79; Significance: 5e-37; HSPs: 1)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 151 - 241
Target Start/End: Complemental strand, 23922 - 23832
Alignment:
Q  151 attagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagattgctcctcttctcacaagattcttctcttctctg 241  Q
    ||||||||||| ||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23922 attagagaaagctagtctcacccttaccttgaattagatgatcggactctacaagattgctcctcttctcacaagattcttctcttctctg 23832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 57 - 178
Target Start/End: Complemental strand, 6809 - 6688
Alignment:
Q  57 aacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacatgctaaactcaatttcagaattatacaacttagaattaga 156  Q
    ||||||||||||||||||| |||||||||||| ||||| ||| ||||||||||||| || || ||||  || ||||||||| ||||||||||||||||||    
T  6809 aacaaccaattacaacttctaaacctaattcctaaatttccaaaactacaacctaccacctgttaaatccagtttcagaatcatacaacttagaattaga 6710  T
Q  157 gaaagttagtcccacccttacc 178  Q
    ||||||||||||||||||||||    
T  6709 gaaagttagtcccacccttacc 6688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0628 (Bit Score: 77; Significance: 8e-36; HSPs: 1)
Name: scaffold0628
Description:

Target: scaffold0628; HSP #1
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 13 - 196
Target Start/End: Complemental strand, 1226 - 1043
Alignment:
Q  13 tggacatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctac 112  Q
    ||||||| | |||||||  |||||||| ||||| |||||||   | |||| |||||||||||| || ||||| |||||||||| || |||| ||||||||    
T  1226 tggacattatttctacatcaattcaacagattt-ctactcttaaatcaactaattacaacttctaaccctaaatcccaaattctcaaaactccaacctac 1128  T
Q  113 aacatgctaaactcaattt-cagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcgga 196  Q
    ||| || |||| ||||||| ||||||||||  ||||||||| |||||||||||||||||||||||||||| ||||||||||||||    
T  1127 aacttgttaaattcaattttcagaattataacacttagaataagagaaagttagtcccacccttaccttagattagatgatcgga 1043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 77; Significance: 8e-36; HSPs: 3)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 21 - 181
Target Start/End: Complemental strand, 10913 - 10755
Alignment:
Q  21 aattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacatgct 120  Q
    |||||||||| |||||||  |||| |||||| |   ||||||||||||||||||| || ||||||||||||||||||| ||||| |||||||||| || |    
T  10913 aattctacaccaattcaatagattctctactattacaacaaccaattacaacttctaaccctaattcccaaattccca-aacta-aacctacaacctgtt 10816  T
Q  121 aaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 181  Q
    |||  || ||||| ||| |||||||||||||||||||||||||||||||||||||||||||    
T  10815 aaatccagtttcacaatcatacaacttagaattagagaaagttagtcccacccttacctta 10755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 106 - 181
Target Start/End: Complemental strand, 5120 - 5045
Alignment:
Q  106 aacctacaacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 181  Q
    |||||||||| || ||||  || ||||| ||| |||||||||||||||||||||||||||||||||||||||||||    
T  5120 aacctacaacttgttaaatccagtttcacaatcatacaacttagaattagagaaagttagtcccacccttacctta 5045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 181
Target Start/End: Original strand, 1937 - 1989
Alignment:
Q  129 tttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 181  Q
    ||||||||||| |  ||||||||||||| |||||||||||||||||| |||||    
T  1937 tttcagaattaaaatacttagaattagataaagttagtcccaccctttcctta 1989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174 (Bit Score: 75; Significance: 1e-34; HSPs: 6)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 26 - 177
Target Start/End: Original strand, 5167 - 5310
Alignment:
Q  26 tacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacatgctaaact 125  Q
    |||| ||| |||| |||||||||| |||||||||||||||||||||||||||||| ||||||||||||||        |||| | ||||||||| |||||    
T  5167 tacaaaaagtcaatggattttctattctattaacaaccaattacaacttcaaaacgtaattcccaaattc--------acaaacaacaacatgcaaaact 5258  T
Q  126 caatttcagaattatacaacttagaattagagaaagttagtcccacccttac 177  Q
    |||||||||||||||||||| ||  |||||||||||||| ||||||||||||    
T  5259 caatttcagaattatacaacctaagattagagaaagttaatcccacccttac 5310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 26 - 177
Target Start/End: Original strand, 11287 - 11430
Alignment:
Q  26 tacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacatgctaaact 125  Q
    |||| ||| |||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||        |||| | ||||||||| |||||    
T  11287 tacaaaaagtcaatggattttctattctattaacaaccaattacaacttcaaaacctaattcccaaattc--------acaaacaacaacatgcaaaact 11378  T
Q  126 caatttcagaattatacaacttagaattagagaaagttagtcccacccttac 177  Q
    |||||||||||| ||||||| ||  |||||||||||||| ||||||||||||    
T  11379 caatttcagaatgatacaacctaagattagagaaagttaatcccacccttac 11430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 27 - 182
Target Start/End: Original strand, 19605 - 19759
Alignment:
Q  27 acacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacatgctaaactc 126  Q
    |||||||||||| |||||||||| | ||||||||| |||||||||||||| |||||||||| ||||||| || |   |||| | ||||||||||||||||    
T  19605 acacaaattcaatggattttctatt-tattaacaatcaattacaacttcataacctaattctcaaattcacaaattcacaaacaacaacatgctaaactc 19703  T
Q  127 aatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaa 182  Q
    ||||||||||||||| ||| ||  |||||||||| ||| |||||| ||||| ||||    
T  19704 aatttcagaattatataacctaagattagagaaatttaatcccacacttacgttaa 19759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 129 - 220
Target Start/End: Original strand, 5454 - 5545
Alignment:
Q  129 tttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagattgctcctcttctc 220  Q
    |||||||||||||||||| |  ||||||||||| ||||||||||||||||||| |||||||||| || |||||| |||||||||||||||||    
T  5454 tttcagaattatacaactcattattagagaaaggtagtcccacccttaccttagattagatgattggtctctacgagattgctcctcttctc 5545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 129 - 220
Target Start/End: Original strand, 11616 - 11707
Alignment:
Q  129 tttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagattgctcctcttctc 220  Q
    |||||||||||||||||  |   ||||||||| ||||||||||||||| |||| ||||||||||||| |||| | |||||||||||||||||    
T  11616 tttcagaattatacaacccatttttagagaaatttagtcccacccttatcttacattagatgatcggtctctgcgagattgctcctcttctc 11707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 151 - 220
Target Start/End: Original strand, 19878 - 19947
Alignment:
Q  151 attagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagattgctcctcttctc 220  Q
    ||||||||||  |||||| |||||||||||| |||||||||||||  ||||| |||||||||||||||||    
T  19878 attagagaaatctagtcctacccttaccttagattagatgatcggtttctacgagattgctcctcttctc 19947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0853 (Bit Score: 72; Significance: 8e-33; HSPs: 1)
Name: scaffold0853
Description:

Target: scaffold0853; HSP #1
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 129 - 240
Target Start/End: Complemental strand, 2506 - 2396
Alignment:
Q  129 tttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagattgctcctcttctcacaagatt 228  Q
    |||||||||||||||||  |  ||||||||||| |||||||||||||||||||||||||||| ||||||| |||||||||||| ||||||||||||||||    
T  2506 tttcagaattatacaacccattattagagaaagctagtcccacccttaccttaaattagatgttcggactttacaagattgct-ctcttctcacaagatt 2408  T
Q  229 cttctcttctct 240  Q
    | ||||||||||    
T  2407 cctctcttctct 2396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203 (Bit Score: 72; Significance: 8e-33; HSPs: 1)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 129 - 208
Target Start/End: Complemental strand, 17992 - 17913
Alignment:
Q  129 tttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagatt 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||    
T  17992 tttcagaattatacaacttagaattagagaaagttagtcccacccttaccttagattagatgatcggattctacaagatt 17913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 72; Significance: 8e-33; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 161 - 240
Target Start/End: Complemental strand, 13572 - 13493
Alignment:
Q  161 gttagtcccacccttaccttaaattagatgatcggactctacaagattgctcctcttctcacaagattcttctcttctct 240  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  13572 gttagtcccacccttaccttaaattagatgatcggactctacaagattaatcctcttctcacaagattcttctcttctct 13493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0379 (Bit Score: 71; Significance: 3e-32; HSPs: 2)
Name: scaffold0379
Description:

Target: scaffold0379; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 151 - 241
Target Start/End: Original strand, 10969 - 11059
Alignment:
Q  151 attagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagattgctcctcttctcacaagattcttctcttctctg 241  Q
    ||||||||||| |||| |||||||||||||| ||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||    
T  10969 attagagaaagctagttccacccttaccttatattagatgatcagattctacaagattgctcctcttctcacaagattcttctcttctctg 11059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0379; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 64 - 182
Target Start/End: Original strand, 10741 - 10851
Alignment:
Q  64 aattacaacttcaaaacctaattcccaaattcccataactacaacctacaacatgctaaactcaatttcagaattatacaacttagaattagagaaagtt 163  Q
    ||||||||||||||||||||||||||||||||        |||| | ||||||||||||||||||||||||||||||||||| || ||||||||||||||    
T  10741 aattacaacttcaaaacctaattcccaaattc--------acaaacaacaacatgctaaactcaatttcagaattatacaacctaaaattagagaaagtt 10832  T
Q  164 agtcccacccttaccttaa 182  Q
    | |||||||||||| ||||    
T  10833 aatcccacccttacattaa 10851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0156 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 57 - 175
Target Start/End: Original strand, 16532 - 16650
Alignment:
Q  57 aacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacatgctaaactcaatttcagaattatacaacttagaattaga 156  Q
    ||||||||||||||||||| |||||||||| ||||||| ||| ||||||||||||| ||||| ||||  || ||||||||| ||||||||||||||||||    
T  16532 aacaaccaattacaacttctaaacctaattgccaaatttccaaaactacaacctaccacatgttaaatccagtttcagaatcatacaacttagaattaga 16631  T
Q  157 gaaagttagtcccaccctt 175  Q
     ||| ||||||||||||||    
T  16632 taaatttagtcccaccctt 16650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0802 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0802
Description:

Target: scaffold0802; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 61 - 181
Target Start/End: Complemental strand, 4830 - 4709
Alignment:
Q  61 accaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacatgctaaactcaattt-cagaattatacaacttagaattagagaa 159  Q
    |||||| |||||||| |||||||||| |||||||||   |||| ||||||||||| || |||| ||||||| ||||||||||| ||||||||||||||||    
T  4830 accaatgacaacttctaaacctaatttccaaattccacaaacttcaacctacaacttgttaaattcaattttcagaattatactacttagaattagagaa 4731  T
Q  160 agttagtcccacccttacctta 181  Q
    ||||||||||||||||||||||    
T  4730 agttagtcccacccttacctta 4709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 69; Significance: 5e-31; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 30 - 177
Target Start/End: Complemental strand, 26779 - 26638
Alignment:
Q  30 caaattcaacggattttctactctattaacaacc-aattacaacttcaaaacctaattcccaaattcccataactacaacctacaacatgctaaactcaa 128  Q
    ||||||||| |||||||||||||||||||||||| |||||| | |||||||||||||||||||||||        |||| | ||||||||||||||||||    
T  26779 caaattcaatggattttctactctattaacaaccaaattactaattcaaaacctaattcccaaattc--------acaaacaacaacatgctaaactcaa 26688  T
Q  129 -tttcagaattatacaacttagaattagagaaagttagtcccacccttac 177  Q
     ||||||||||||||||| || ||||| ||||||||| ||||||||||||    
T  26687 ttttcagaattatacaacctaaaattaaagaaagttaatcccacccttac 26638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 129 - 208
Target Start/End: Complemental strand, 61900 - 61821
Alignment:
Q  129 tttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagatt 208  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||| |||||||||||    
T  61900 tttcagaattatacaacttagaattagagaaagttagtctcacccttaccttagattagatgatcggattctacaagatt 61821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 67; Significance: 7e-30; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 60 - 181
Target Start/End: Complemental strand, 135625 - 135504
Alignment:
Q  60 aaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacatgctaaactcaa-tttcagaattatacaacttagaattagaga 158  Q
    |||||||| ||||||| ||  |||||||||||||||||| |||||||||||||||| || |||| |||| |||||||||||||| |||||||||||| ||    
T  135625 aaccaatttcaacttctaactctaattcccaaattcccaaaactacaacctacaacctgttaaattcaattttcagaattatac-acttagaattagtga 135527  T
Q  159 aagttagtcccacccttacctta 181  Q
    | |||||||||||||||||||||    
T  135526 aggttagtcccacccttacctta 135504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 65; Significance: 1e-28; HSPs: 2)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 59 - 181
Target Start/End: Original strand, 8571 - 8694
Alignment:
Q  59 caaccaattacaacttcaaaacctaatt-cccaaattcccataactacaacctacaacatgctaaactcaa-tttcagaattatacaacttagaattaga 156  Q
    ||||||||||||||||| || ||||||| |||||||||||| |||||||||||||||| || |||| |||| ||||||||| |||| ||||||||||||     
T  8571 caaccaattacaacttctaaccctaatttcccaaattcccaaaactacaacctacaacctgttaaattcaattttcagaatcatac-acttagaattagt 8669  T
Q  157 gaaagttagtcccacccttacctta 181  Q
    ||| |||||||||||||||||||||    
T  8670 gaaggttagtcccacccttacctta 8694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 26 - 138
Target Start/End: Original strand, 18744 - 18856
Alignment:
Q  26 tacacaaattcaacggattttctactctattaacaaccaattacaact-tcaaaacctaattcccaaattcccataactacaacctacaacatgctaaac 124  Q
    ||||||||||| | |||||||||| || ||||||||| |||| ||| | |||||||||||||||| ||||||   || | | | | |||||||| |||||    
T  18744 tacacaaattctatggattttctattcaattaacaactaattgcaattctcaaaacctaattccc-aattcctcaaattcccaaccacaacatgttaaac 18842  T
Q  125 tcaatttcagaatt 138  Q
    ||||||||||||||    
T  18843 tcaatttcagaatt 18856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 57 - 181
Target Start/End: Complemental strand, 106175 - 106051
Alignment:
Q  57 aacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacatgctaaactcaatttcagaattatacaacttagaattaga 156  Q
    |||||||||||||||| || |||||||||||||||||| ||| |||||||  |||| || || ||||  || |||| |||| ||||||||||||||||||    
T  106175 aacaaccaattacaacgtctaaacctaattcccaaatttccaaaactacagtctaccacctgttaaatccagtttccgaatcatacaacttagaattaga 106076  T
Q  157 gaaagttagtcccacccttacctta 181  Q
    ||||||||||| |||||||||||||    
T  106075 gaaagttagtcacacccttacctta 106051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0414 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0414
Description:

Target: scaffold0414; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 151 - 241
Target Start/End: Complemental strand, 11190 - 11100
Alignment:
Q  151 attagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagattgctcctcttctcacaagattcttctcttctctg 241  Q
    ||||||||||| |||||||| |||||||||||||||| ||||||||| ||| ||||||||| ||||||||| |||||||||||||||||||    
T  11190 attagagaaagctagtcccatccttaccttaaattaggtgatcggacactaaaagattgcttctcttctcagaagattcttctcttctctg 11100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 59 - 180
Target Start/End: Complemental strand, 3174 - 3053
Alignment:
Q  59 caaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacatgctaaactcaa-tttcagaattatacaacttagaattagag 157  Q
    ||||||||||||||||| || ||||||||| ||||||||| |||||||||||||||| || |||| |||| ||||||||| |||| |||||||||||  |    
T  3174 caaccaattacaacttctaaccctaattcctaaattcccaaaactacaacctacaacttgttaaattcaattttcagaataatac-acttagaattattg 3076  T
Q  158 aaagttagtcccacccttacctt 180  Q
    || ||||||||||||||||||||    
T  3075 aaggttagtcccacccttacctt 3053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0848 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0848
Description:

Target: scaffold0848; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 59 - 182
Target Start/End: Complemental strand, 2143 - 2020
Alignment:
Q  59 caaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacatgctaaactcaa-tttcagaattatacaacttagaattagag 157  Q
    ||||||||||||||||  |||||||||||||||||| ||| ||||||||||||||||||| |||| |||| ||||| ||| |||| |||||||||||| |    
T  2143 caaccaattacaacttataaacctaattcccaaatttccaaaactacaacctacaacatgttaaattcaattttcaaaatcatac-acttagaattagtg 2045  T
Q  158 aaagttagtcccacccttaccttaa 182  Q
    || |||| ||||||||||| |||||    
T  2044 aaggttaatcccacccttagcttaa 2020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 59 - 181
Target Start/End: Original strand, 7205 - 7329
Alignment:
Q  59 caaccaattacaacttcaaaacctaattc-ccaaattcccataactacaacctacaacatgctaaactcaattt-cagaattatacaacttagaattaga 156  Q
    ||||||||||||||||| || |||||||  ||||||||||| ||||| |||||||||||||  |||  |||||| ||||||||||||||||||||||| |    
T  7205 caaccaattacaacttctaaccctaattttccaaattcccaaaactataacctacaacatgtcaaatccaattttcagaattatacaacttagaattaaa 7304  T
Q  157 gaaagttagtcccacccttacctta 181  Q
    ||| |||||||||||||| ||||||    
T  7305 gaatgttagtcccaccctcacctta 7329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 161 - 240
Target Start/End: Original strand, 28583 - 28662
Alignment:
Q  161 gttagtcccacccttaccttaaattagatgatcggactctacaagattgctcctcttctcacaagattcttctcttctct 240  Q
    ||||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| || ||||||||    
T  28583 gttagtcccactcttaccttagattagatgataggactctacaagattgctcctcttctcacaagattattttcttctct 28662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 64 - 181
Target Start/End: Complemental strand, 20202 - 20086
Alignment:
Q  64 aattacaacttcaaaacctaattcccaaattcccataactacaacctacaacatgctaaactcaa-tttcagaattatacaacttagaattagagaaagt 162  Q
    |||||||||||| |||| ||||||||||||||||| ||||| |||||||||| || |||| |||| |||||||||||||| |||||||||||| ||| ||    
T  20202 aattacaacttctaaacataattcccaaattccca-aactataacctacaacctgttaaattcaattttcagaattatac-acttagaattagtgaaggt 20105  T
Q  163 tagtcccacccttacctta 181  Q
    ||||||| |||||||||||    
T  20104 tagtcccgcccttacctta 20086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 58; Significance: 2e-24; HSPs: 2)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 69 - 181
Target Start/End: Original strand, 67060 - 67173
Alignment:
Q  69 caacttcaaaacctaattcccaaattcccataactacaacctacaacatgctaaactcaattt-cagaattatacaacttagaattagagaaagttagtc 167  Q
    ||||||| |||||| ||||||||||||| | |||||||||||||||  || ||||  |||||| ||||||||||| |||| |||||||||||||||||||    
T  67060 caacttctaaaccttattcccaaattcctaaaactacaacctacaatttgttaaatccaattttcagaattataccacttcgaattagagaaagttagtc 67159  T
Q  168 ccacccttacctta 181  Q
    ||||| ||||||||    
T  67160 ccacctttacctta 67173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 129 - 194
Target Start/End: Original strand, 18275 - 18340
Alignment:
Q  129 tttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcg 194  Q
    |||||||||||||||||  |  ||||||||||| ||||| |||||||||||||  |||||||||||    
T  18275 tttcagaattatacaacccattattagagaaagctagtcacacccttaccttaggttagatgatcg 18340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 78 - 181
Target Start/End: Original strand, 60843 - 60947
Alignment:
Q  78 aacctaattcccaaattcccataactacaacctacaacatgctaaactcaatt-tcagaattatacaacttagaattagagaaagttagtcccaccctta 176  Q
    |||||||||| ||||| | || ||||||||||||||||||| |||| |||||| |||||||||||||||||||||||| |||| ||||||| || |||||    
T  60843 aacctaattctcaaatcctcaaaactacaacctacaacatgttaaattcaattctcagaattatacaacttagaattaaagaaggttagtctcatcctta 60942  T
Q  177 cctta 181  Q
    |||||    
T  60943 cctta 60947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 78 - 181
Target Start/End: Complemental strand, 126407 - 126305
Alignment:
Q  78 aacctaattcccaaattcccataactacaacctacaacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttac 177  Q
    |||||||||| ||||| | || |||||||| ||||||| || ||||  |||||||||||| |||||||||||||||||||||||||||||||| ||||||    
T  126407 aacctaattctcaaatcctcaaaactacaatctacaacttgttaaatccaatttcagaatcatacaacttagaattagagaaagttagtccca-ccttac 126309  T
Q  178 ctta 181  Q
    ||||    
T  126308 ctta 126305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0371 (Bit Score: 55; Significance: 1e-22; HSPs: 2)
Name: scaffold0371
Description:

Target: scaffold0371; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 151 - 241
Target Start/End: Complemental strand, 10476 - 10386
Alignment:
Q  151 attagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagattgctcctcttctcacaagattcttctcttctctg 241  Q
    |||| |||| |||||||||||||||||||||  |||   ||||| ||||||||||||||||||||||||||||||||| ||||||||||||    
T  10476 attaaagaaggttagtcccacccttaccttaggttaatcgatcgaactctacaagattgctcctcttctcacaagattattctcttctctg 10386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0371; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 156 - 241
Target Start/End: Original strand, 3901 - 3986
Alignment:
Q  156 agaaagttagtcccacccttaccttaaattagatgatcggactctacaagattgctcctcttctcacaagattcttctcttctctg 241  Q
    |||| ||| ||| |||||||||||||  |||   ||||| |||||| |||||||||| ||||||||||||||||||||||||||||    
T  3901 agaaggttggtcacacccttaccttaggttaatcgatcgaactctataagattgctcatcttctcacaagattcttctcttctctg 3986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 55; Significance: 1e-22; HSPs: 3)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 80 - 181
Target Start/End: Original strand, 19905 - 20006
Alignment:
Q  80 cctaattcccaaattcccataactacaacctacaacatgctaaactcaattt-cagaattatacaacttagaattagagaaagttagtcccacccttacc 178  Q
    |||||||| ||||| |||| |||||||||||||||| || ||||  |||||| ||||||||||  |||||||||||||||||||||||||||||||||||    
T  19905 cctaattctcaaatcccca-aactacaacctacaacttgttaaatccaattttcagaattataacacttagaattagagaaagttagtcccacccttacc 20003  T
Q  179 tta 181  Q
    |||    
T  20004 tta 20006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 59 - 92
Target Start/End: Original strand, 13878 - 13911
Alignment:
Q  59 caaccaattacaacttcaaaacctaattcccaaa 92  Q
    ||||||||||||||||| ||||||||||||||||    
T  13878 caaccaattacaacttctaaacctaattcccaaa 13911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220; HSP #3
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 129 - 186
Target Start/End: Original strand, 13949 - 14006
Alignment:
Q  129 tttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaatta 186  Q
    |||||||||| ||||||  |  ||||||||||| ||||||||||||||||||| ||||    
T  13949 tttcagaattttacaacccattattagagaaagctagtcccacccttaccttagatta 14006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1256 (Bit Score: 54; Significance: 4e-22; HSPs: 2)
Name: scaffold1256
Description:

Target: scaffold1256; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 129 - 194
Target Start/End: Complemental strand, 2252 - 2187
Alignment:
Q  129 tttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcg 194  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||  |||||||||||    
T  2252 tttcagaattatacaacttagaattagagaaaattagtcccacccttaccttaggttagatgatcg 2187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1256; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 213 - 241
Target Start/End: Complemental strand, 2169 - 2141
Alignment:
Q  213 ctcttctcacaagattcttctcttctctg 241  Q
    |||||||||||||||||||||||||||||    
T  2169 ctcttctcacaagattcttctcttctctg 2141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 148 - 241
Target Start/End: Original strand, 1957 - 2050
Alignment:
Q  148 agaattagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagattgctcctcttctcacaagattcttctcttctctg 241  Q
    |||||||  ||| |||||||||||||||||||||   ||   ||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  1957 agaattattgaaggttagtcccacccttaccttagcataatcgatcgaactctacaagattgctcctcttctcacaagattcttctcttctctg 2050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0256 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0256
Description:

Target: scaffold0256; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 111 - 173
Target Start/End: Complemental strand, 1917 - 1855
Alignment:
Q  111 acaacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccaccc 173  Q
    |||||||| |||| |||||||||||||||||| ||||||||||||||||||||||||||||||    
T  1917 acaacatgttaaattcaatttcagaattataccacttagaattagagaaagttagtcccaccc 1855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0516 (Bit Score: 50; Significance: 1e-19; HSPs: 3)
Name: scaffold0516
Description:

Target: scaffold0516; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 133 - 194
Target Start/End: Complemental strand, 5353 - 5292
Alignment:
Q  133 agaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcg 194  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||  |||||||||||    
T  5353 agaattatacaacttaaaattagagaaagttagtcccacccttaccttaggttagatgatcg 5292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0516; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 213 - 241
Target Start/End: Complemental strand, 5177 - 5149
Alignment:
Q  213 ctcttctcacaagattcttctcttctctg 241  Q
    |||||||||||||||||||||||||||||    
T  5177 ctcttctcacaagattcttctcttctctg 5149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0516; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 213 - 241
Target Start/End: Complemental strand, 5274 - 5246
Alignment:
Q  213 ctcttctcacaagattcttctcttctctg 241  Q
    |||||||||||||||||||||||||||||    
T  5274 ctcttctcacaagattcttctcttctctg 5246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 151 - 208
Target Start/End: Complemental strand, 18670 - 18613
Alignment:
Q  151 attagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagatt 208  Q
    ||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||    
T  18670 attagagaaagctagtcccacccttaccttagattagatgatcggactctacaagatt 18613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 59 - 92
Target Start/End: Complemental strand, 18764 - 18731
Alignment:
Q  59 caaccaattacaacttcaaaacctaattcccaaa 92  Q
    ||||||||||||||||| ||||||||||||||||    
T  18764 caaccaattacaacttctaaacctaattcccaaa 18731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 127 - 176
Target Start/End: Complemental strand, 5761 - 5712
Alignment:
Q  127 aatttcagaattatacaacttagaattagagaaagttagtcccaccctta 176  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5761 aatttcagaattatacaacttagaattagagaaagttagtcccaccctta 5712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0671 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0671
Description:

Target: scaffold0671; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 78 - 181
Target Start/End: Original strand, 4888 - 4992
Alignment:
Q  78 aacctaattcccaaattcccataactacaacctacaacatgctaaactcaatt-tcagaattatacaacttagaattagagaaagttagtcccaccctta 176  Q
    ||||||||||  |||| | || ||||||| ||||||||||| ||||  ||| | |||||||||||||||||||||||| |||| ||||||||||||||||    
T  4888 aacctaattcttaaatcctcaaaactacatcctacaacatgttaaatccaactctcagaattatacaacttagaattaaagaaggttagtcccaccctta 4987  T
Q  177 cctta 181  Q
    |||||    
T  4988 cctta 4992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0589 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0589
Description:

Target: scaffold0589; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 78 - 181
Target Start/End: Original strand, 4333 - 4437
Alignment:
Q  78 aacctaattcccaaattcccataactacaacctacaacatgctaaactcaatt-tcagaattatacaacttagaattagagaaagttagtcccaccctta 176  Q
    |||||||||| ||||| | || ||||||||||||||||||| ||||  || || |||||||||||||||||||||||| |||| |||||||||| | |||    
T  4333 aacctaattctcaaatcctcaaaactacaacctacaacatgttaaatccagttctcagaattatacaacttagaattaaagaaggttagtcccatcgtta 4432  T
Q  177 cctta 181  Q
    |||||    
T  4433 cctta 4437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0395
Description:

Target: scaffold0395; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 161 - 241
Target Start/End: Original strand, 11921 - 12001
Alignment:
Q  161 gttagtcccacccttaccttaaattagatgatcggactctacaagattgctcctcttctcacaagattcttctcttctctg 241  Q
    ||||||| |||||||| ||||  |||   ||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  11921 gttagtctcacccttatcttaggttaatcgatcgaactctacaagattgctcctcttctcacaagattcttctcttctctg 12001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0071 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 129 - 181
Target Start/End: Original strand, 15272 - 15324
Alignment:
Q  129 tttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 181  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  15272 tttcagaataatacaacttagaattagagaaagttagtcccacccttacctta 15324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 78 - 181
Target Start/End: Original strand, 398510 - 398614
Alignment:
Q  78 aacctaattcccaaattcccataactacaacctacaacatgctaaactcaatt-tcagaattatacaacttagaattagagaaagttagtcccaccctta 176  Q
    ||||||||||  |||| | || ||||||| ||||||||||| ||||  ||||| ||||||||||||||| |||||||| |||| ||||||||||||||||    
T  398510 aacctaattcttaaatcctcaaaactacatcctacaacatgttaaatccaattctcagaattatacaacctagaattaaagaaggttagtcccaccctta 398609  T
Q  177 cctta 181  Q
    |||||    
T  398610 cctta 398614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0676 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0676
Description:

Target: scaffold0676; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 129 - 208
Target Start/End: Original strand, 2881 - 2960
Alignment:
Q  129 tttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagatt 208  Q
    |||||||||||||||||  |  ||||||||||| ||||||||||||||||||| |||| |||||| ||||||||||||||    
T  2881 tttcagaattatacaacccattattagagaaagctagtcccacccttaccttagattaaatgatcagactctacaagatt 2960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 78 - 177
Target Start/End: Original strand, 96347 - 96446
Alignment:
Q  78 aacctaattcccaaattcccataactacaacctacaacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttac 177  Q
    |||||||||| | ||| | || |||||||||||||||| || ||||  || ||||||||| |||||||| ||||||||||||||||||||||||| ||||    
T  96347 aacctaattctccaatcctcaaaactacaacctacaacttgttaaatccattttcagaatcatacaactcagaattagagaaagttagtcccacctttac 96446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 28 - 94
Target Start/End: Complemental strand, 6686 - 6620
Alignment:
Q  28 cacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaatt 94  Q
    ||||||||||  |||| ||||||||||||||||||||||||| || |||||||||||||||||||||    
T  6686 cacaaattcattggatcttctactctattaacaaccaattacgacatcaaaacctaattcccaaatt 6620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0819 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0819
Description:

Target: scaffold0819; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 73 - 181
Target Start/End: Original strand, 5311 - 5418
Alignment:
Q  73 ttcaaaacctaattcccaaattcccataactacaacctacaacatgctaaactcaattt-cagaattatacaacttagaattagagaaagttagtcccac 171  Q
    |||||| |||||||||| ||||| || |||||||| ||||| |||| |||| ||||||| |||||| ||||| ||||||||||| ||| |||||||||||    
T  5311 ttcaaaccctaattcccgaattcacaaaactacaatctaca-catgttaaattcaattttcagaatcataca-cttagaattagtgaaggttagtcccac 5408  T
Q  172 ccttacctta 181  Q
    ||||||||||    
T  5409 ccttacctta 5418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0577 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0577
Description:

Target: scaffold0577; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 73 - 181
Target Start/End: Original strand, 9004 - 9111
Alignment:
Q  73 ttcaaaacctaattcccaaattcccataactacaacctacaacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacc 172  Q
    |||||| ||||||||||||||||| | |||||||||||||||| || ||||  || ||||||||||| |  ||| |||||||  ||| ||||||||||||    
T  9004 ttcaaaccctaattcccaaattccaaaaactacaacctacaacctgttaaatccagtttcagaattaca-tactcagaattactgaaggttagtcccacc 9102  T
Q  173 cttacctta 181  Q
    |||||||||    
T  9103 cttacctta 9111  T

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Target: scaffold0439 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 58 - 137
Target Start/End: Original strand, 12323 - 12403
Alignment:
Q  58 acaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaa-catgctaaactcaatttcagaat 137  Q
    |||||| ||||||||||| ||||||||||| |||||| ||| ||||||||||||||| |||| |||| |||||||||||||    
T  12323 acaacctattacaacttctaaacctaattctcaaatttccaaaactacaacctacaaccatgttaaattcaatttcagaat 12403  T

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Target: scaffold0065 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 78 - 181
Target Start/End: Complemental strand, 52648 - 52544
Alignment:
Q  78 aacctaattcccaaattcccataactacaacctacaacatgctaaactcaatt-tcagaattatacaacttagaattagagaaagttagtcccaccctta 176  Q
    |||||||||| ||||| | || ||||||| ||||||||||| ||||  ||||| ||||||||| ||||||||||||||  ||| ||||||||||||||||    
T  52648 aacctaattctcaaatcctcaaaactacatcctacaacatgttaaatccaattctcagaattacacaacttagaattaatgaaggttagtcccaccctta 52549  T
Q  177 cctta 181  Q
     ||||    
T  52548 tctta 52544  T

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Target: scaffold0042 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 82 - 181
Target Start/End: Original strand, 29340 - 29440
Alignment:
Q  82 taattcccaaattcccataactacaacctacaacatgctaaactcaattt-cagaattatacaacttagaattagagaaagttagtcccacccttacctt 180  Q
    |||||| ||||| |||| |||||||||||||||| || ||||  || ||| |||||| |||||||||||||||| ||||  |||||||||||||||||||    
T  29340 taattctcaaatccccaaaactacaacctacaacttgttaaatccacttttcagaatcatacaacttagaattaaagaagattagtcccacccttacctt 29439  T
Q  181 a 181  Q
    |    
T  29440 a 29440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 151 - 220
Target Start/End: Complemental strand, 127373 - 127302
Alignment:
Q  151 attagagaaagttagtcccacccttaccttaaattagatgat--cggactctacaagattgctcctcttctc 220  Q
    ||||||||||| ||||||||||||||||||| ||||||||||  | ||||||||||| ||||||||||||||    
T  127373 attagagaaagctagtcccacccttaccttagattagatgattacagactctacaagcttgctcctcttctc 127302  T

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Target: scaffold0007 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 54 - 181
Target Start/End: Complemental strand, 158949 - 158822
Alignment:
Q  54 attaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacatgctaaactcaa-tttcagaattatacaacttagaat 152  Q
    |||| |||||| || ||||||| || ||||||||||||||||||| |||||||||||||||| || ||||  ||| ||| ||||| |||  ||| |||||    
T  158949 attatcaaccatttgcaacttctaaccctaattcccaaattcccaaaactacaacctacaacttgttaaatccaatttttagaatcata-tactcagaat 158851  T
Q  153 tagagaaagttagtcccacccttacctta 181  Q
    ||  ||| |||||||||||||||||||||    
T  158850 tattgaaggttagtcccacccttacctta 158822  T

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Target: scaffold0007; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 181
Target Start/End: Complemental strand, 18749 - 18701
Alignment:
Q  133 agaattatacaacttagaattagagaaagttagtcccacccttacctta 181  Q
    |||||||||||||| |  |||||||||||||| ||||||||| ||||||    
T  18749 agaattatacaactcattattagagaaagttaatcccaccctcacctta 18701  T

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Target: scaffold0859 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0859
Description:

Target: scaffold0859; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 59 - 166
Target Start/End: Original strand, 4612 - 4718
Alignment:
Q  59 caaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacatgctaaactcaatttcagaattatacaacttagaattagaga 158  Q
    |||| |||||||||||| ||||||||||| |||||||||| ||| |||||||| ||| || |||| ||||||| ||||| |||| |||||| ||||| ||    
T  4612 caactaattacaacttctaaacctaattctcaaattcccaaaaccacaacctaaaacctgttaaattcaattttagaatcatac-acttaggattagtga 4710  T
Q  159 aagttagt 166  Q
    | ||||||    
T  4711 aggttagt 4718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0878 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0878
Description:

Target: scaffold0878; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 129 - 219
Target Start/End: Complemental strand, 3474 - 3383
Alignment:
Q  129 tttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatga--tcggactctacaagattgctcctcttct 219  Q
    ||||||||| |||||||  |  ||||||||||| ||||||||||||||||||| |||||||||  |||||||||| ||| |||||||||||||    
T  3474 tttcagaatcatacaacgcattattagagaaagctagtcccacccttaccttagattagatgatttcggactcta-aagcttgctcctcttct 3383  T

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Target: scaffold0180 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 59 - 191
Target Start/End: Complemental strand, 28451 - 28319
Alignment:
Q  59 caaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacatgctaaactcaa-tttcagaattatacaacttagaattagag 157  Q
    |||||| || ||||||| || ||||||| ||||||||||| |||||||||||||||| || ||||  ||| ||||||||| |||  ||| |||||||  |    
T  28451 caaccatttgcaacttctaaccctaatttccaaattcccaaaactacaacctacaacttgttaaatccaattttcagaatcata-tactcagaattattg 28353  T
Q  158 aaagttagtcccacccttaccttaaattagatga 191  Q
    || | |||||||||||||||||||| ||| ||||    
T  28352 aagggtagtcccacccttaccttaatttaaatga 28319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0515 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0515
Description:

Target: scaffold0515; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 129 - 181
Target Start/End: Original strand, 5029 - 5081
Alignment:
Q  129 tttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 181  Q
    ||||||||||| |  ||||||||||||||||||||||||||||||||||||||    
T  5029 tttcagaattaaattacttagaattagagaaagttagtcccacccttacctta 5081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0436 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0436
Description:

Target: scaffold0436; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 129 - 181
Target Start/End: Original strand, 8960 - 9012
Alignment:
Q  129 tttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 181  Q
    ||||||||||| |  ||||||||||||||||||||||||||||||||||||||    
T  8960 tttcagaattaaaatacttagaattagagaaagttagtcccacccttacctta 9012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 129 - 181
Target Start/End: Original strand, 5029 - 5081
Alignment:
Q  129 tttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 181  Q
    ||||||||||| |  ||||||||||||||||||||||||||||||||||||||    
T  5029 tttcagaattaaattacttagaattagagaaagttagtcccacccttacctta 5081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 66 - 181
Target Start/End: Original strand, 31046 - 31160
Alignment:
Q  66 ttacaacttcaaaacctaattcccaaattcccataactacaacctacaacatgctaaactcaattt-cagaattatacaacttagaattagagaaagtta 164  Q
    |||||||||  || ||||||||||||||||||| |||||||||||||||| || ||||  |||||| |||||||| | | || |||||||  ||| ||||    
T  31046 ttacaacttttaaccctaattcccaaattccca-aactacaacctacaacttgttaaatccaattttcagaattacata-ctcagaattattgaaggtta 31143  T
Q  165 gtcccacccttacctta 181  Q
    |||||||||||||||||    
T  31144 gtcccacccttacctta 31160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 129 - 181
Target Start/End: Original strand, 21097 - 21149
Alignment:
Q  129 tttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 181  Q
    ||||||||||| |  ||||||||||||||||||||||||||||||||||||||    
T  21097 tttcagaattaaaatacttagaattagagaaagttagtcccacccttacctta 21149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 129 - 181
Target Start/End: Original strand, 34112 - 34164
Alignment:
Q  129 tttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 181  Q
    ||||||||||| |  ||||||||||||||||||||||||||||||||||||||    
T  34112 tttcagaattaaaatacttagaattagagaaagttagtcccacccttacctta 34164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 129 - 181
Target Start/End: Complemental strand, 69905 - 69853
Alignment:
Q  129 tttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 181  Q
    ||||||||||| |  ||||||||||||||||||||||||||||||||||||||    
T  69905 tttcagaattaaattacttagaattagagaaagttagtcccacccttacctta 69853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0601 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0601
Description:

Target: scaffold0601; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 144 - 182
Target Start/End: Complemental strand, 233 - 195
Alignment:
Q  144 acttagaattagagaaagttagtcccacccttaccttaa 182  Q
    |||||||||||||||||||||||||||||||||||||||    
T  233 acttagaattagagaaagttagtcccacccttaccttaa 195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 2)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 129 - 220
Target Start/End: Complemental strand, 14638 - 14546
Alignment:
Q  129 tttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgat--cggactctacaagattgctcctcttctc 220  Q
    |||||||||||||||||  |  ||||||||||| ||||| ||||||||||||| ||||||||||  ||||||||| ||| |||||| |||||||    
T  14638 tttcagaattatacaacccattattagagaaagctagtctcacccttaccttagattagatgattccggactcta-aagcttgctcttcttctc 14546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 129 - 220
Target Start/End: Complemental strand, 23696 - 23604
Alignment:
Q  129 tttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgat--cggactctacaagattgctcctcttctc 220  Q
    |||||||||||||||||  |  ||||||||||| ||||| ||||||||||||| ||||||||||  ||||||||| ||| |||||| |||||||    
T  23696 tttcagaattatacaacccattattagagaaagctagtctcacccttaccttagattagatgattccggactcta-aagcttgctcttcttctc 23604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 129 - 178
Target Start/End: Original strand, 26727 - 26776
Alignment:
Q  129 tttcagaattatacaacttagaattagagaaagttagtcccacccttacc 178  Q
    ||||||||||||||||| || ||||||||||||||| |||||||||||||    
T  26727 tttcagaattatacaacctaaaattagagaaagttaatcccacccttacc 26776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0369 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 159 - 220
Target Start/End: Complemental strand, 15638 - 15576
Alignment:
Q  159 aagttagtcccacccttaccttaaattagatga--tcggactctacaagattgctcctcttctc 220  Q
    ||||||||||||||||||||||| |||||||||  |||||||||| ||| ||||||||||||||    
T  15638 aagttagtcccacccttaccttagattagatgatttcggactcta-aagcttgctcctcttctc 15576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 37; Significance: 0.000000000006; HSPs: 2)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 129 - 181
Target Start/End: Complemental strand, 29268 - 29216
Alignment:
Q  129 tttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 181  Q
    ||||||||||| |  |||||||||||||||||||||||||||| |||||||||    
T  29268 tttcagaattaaaatacttagaattagagaaagttagtcccactcttacctta 29216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 80 - 180
Target Start/End: Original strand, 120905 - 121005
Alignment:
Q  80 cctaattcccaaattcccataactacaacctacaacatgctaaactcaattt-cagaattatacaacttagaattagagaaagttagtcccacccttacc 178  Q
    |||||||| ||||| | || ||||| ||||||||||||| ||||  |||||| |||||||| |  |||||||||||  ||| | ||||||||||||||||    
T  120905 cctaattcacaaatcctcaaaacta-aacctacaacatgttaaatacaattttcagaattaaaacacttagaattattgaaggctagtcccacccttacc 121003  T
Q  179 tt 180  Q
    ||    
T  121004 tt 121005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 59 - 181
Target Start/End: Complemental strand, 35586 - 35464
Alignment:
Q  59 caaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacatgctaaactcaa-tttcagaattatacaacttagaattagag 157  Q
    |||||| || ||||||| || | ||||||||||||||||| |||||||||||||||  || |||| |||| ||||||||| |||  ||| |||||||       
T  35586 caaccatttgcaacttctaaccttaattcccaaattcccaaaactacaacctacaagttgttaaattcaattttcagaatcata-tactcagaattaata 35488  T
Q  158 aaagttagtcccacccttacctta 181  Q
    || |||||||||| ||||||||||    
T  35487 aaggttagtcccatccttacctta 35464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 169 - 208
Target Start/End: Original strand, 11193 - 11232
Alignment:
Q  169 cacccttaccttaaattagatgatcggactctacaagatt 208  Q
    ||||||||||||| ||||||||||||||||||||||||||    
T  11193 cacccttaccttagattagatgatcggactctacaagatt 11232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 133 - 220
Target Start/End: Complemental strand, 35234 - 35145
Alignment:
Q  133 agaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatga--tcggactctacaagattgctcctcttctc 220  Q
    |||||||||||||  |  ||||| ||||| |||| |||||||||||||| ||| | |||  |||||||||||||| ||||||||||||||    
T  35234 agaattatacaacccattattagggaaagctagtaccacccttaccttagattggttgaattcggactctacaagcttgctcctcttctc 35145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0505 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0505
Description:

Target: scaffold0505; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 151 - 192
Target Start/End: Original strand, 4958 - 4999
Alignment:
Q  151 attagagaaagttagtcccacccttaccttaaattagatgat 192  Q
    ||||||||||| ||||||||||||||||||| ||||||||||    
T  4958 attagagaaagctagtcccacccttaccttatattagatgat 4999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0411 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0411
Description:

Target: scaffold0411; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 93 - 181
Target Start/End: Complemental strand, 13505 - 13417
Alignment:
Q  93 ttcccataactacaacctacaacatgctaaactcaattt-cagaattatacaacttagaattagagaaagttagtcccacccttacctta 181  Q
    |||||| |||||||||||||||| || |||| ||| ||| |||||||| ||  ||||||||||  ||| |||||||||||||||||||||    
T  13505 ttcccaaaactacaacctacaacttgttaaattcagttttcagaattaaacc-cttagaattattgaaggttagtcccacccttacctta 13417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 144 - 177
Target Start/End: Original strand, 6383 - 6416
Alignment:
Q  144 acttagaattagagaaagttagtcccacccttac 177  Q
    ||||||||||||||||||||||||||||||||||    
T  6383 acttagaattagagaaagttagtcccacccttac 6416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 144 - 181
Target Start/End: Complemental strand, 21814 - 21777
Alignment:
Q  144 acttagaattagagaaagttagtcccacccttacctta 181  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  21814 acttagaattagagaaagttagtcccatccttacctta 21777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0730 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0730
Description:

Target: scaffold0730; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 111 - 216
Target Start/End: Complemental strand, 6575 - 6468
Alignment:
Q  111 acaacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatga--tcggactctacaagatt 208  Q
    |||||||| ||||| |  ||||||||| |||||||  |  ||||||||||| ||||||| || |||||||| |||||||||  || ||||||||||| ||    
T  6575 acaacatgttaaaccccttttcagaatcatacaacccattattagagaaaggtagtcccgcctttaccttagattagatgatttcagactctacaagctt 6476  T
Q  209 gctcctct 216  Q
    ||| ||||    
T  6475 gcttctct 6468  T

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Target: scaffold0625 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0625
Description:

Target: scaffold0625; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 181
Target Start/End: Complemental strand, 5913 - 5861
Alignment:
Q  129 tttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 181  Q
    |||||||||||||  |||||||||||||||||||||||  |||| ||||||||    
T  5913 tttcagaattataacacttagaattagagaaagttagtatcacctttacctta 5861  T

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Target: scaffold0308 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0308
Description:

Target: scaffold0308; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 59 - 131
Target Start/End: Original strand, 13370 - 13442
Alignment:
Q  59 caaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacatgctaaactcaattt 131  Q
    |||||| || ||||||  || ||||||||||||||||||| |||| ||||||||||| || |||| |||||||    
T  13370 caaccatttgcaacttttaaccctaattcccaaattcccaaaacttcaacctacaacttgttaaattcaattt 13442  T

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Target: scaffold0205 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 82 - 180
Target Start/End: Original strand, 30607 - 30705
Alignment:
Q  82 taattcccaaattcccataactacaacctacaacatgctaaactcaattt-cagaattatacaacttagaattagagaaagttagtcccacccttacctt 180  Q
    ||||| |||||||| || ||||| ||||||||||||| ||||  |||||| |||||||| |  |||||||||||  ||| ||||||| ||||||||||||    
T  30607 taatttccaaattctcaaaacta-aacctacaacatgttaaatacaattttcagaattaaaacacttagaattattgaaggttagtctcacccttacctt 30705  T

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Target: scaffold0043 (Bit Score: 32; Significance: 0.000000006; HSPs: 2)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 80 - 182
Target Start/End: Original strand, 27928 - 28030
Alignment:
Q  80 cctaattcccaaattcccataactacaacctacaacatgctaaactcaattt-cagaattatacaacttagaattagagaaagttagtcccacccttacc 178  Q
    ||||||| |||||| | || ||||| ||||||||||||| ||||  |||||| |||||||| |  |||||||||||  ||| | ||||||||||||||||    
T  27928 cctaatttccaaatcctcaaaacta-aacctacaacatgttaaatacaattttcagaattaaaacacttagaattattgaaggctagtcccacccttacc 28026  T
Q  179 ttaa 182  Q
    ||||    
T  28027 ttaa 28030  T

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Target: scaffold0043; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 106 - 182
Target Start/End: Original strand, 42811 - 42888
Alignment:
Q  106 aacctacaacatgctaaactcaattt-cagaattatacaacttagaattagagaaagttagtcccacccttaccttaa 182  Q
    ||||||||||||| ||||  |||||| |||||||| |  |||||||||||  ||| | ||||||||||||||||||||    
T  42811 aacctacaacatgttaaatacaattttcagaattaaaacacttagaattattgaaggctagtcccacccttaccttaa 42888  T

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Target: scaffold1128 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1128
Description:

Target: scaffold1128; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 141
Target Start/End: Original strand, 448 - 510
Alignment:
Q  80 cctaattcccaaattcc-cataactacaacctacaacatgctaaactcaatttcagaattata 141  Q
    ||||||||||||| ||| || ||||| ||||||||||||| ||||  ||||||||||||||||    
T  448 cctaattcccaaaatcctcaaaactataacctacaacatgttaaatccaatttcagaattata 510  T

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Target: scaffold0148 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 214
Target Start/End: Original strand, 8866 - 8931
Alignment:
Q  151 attagagaaagttagtcccacccttaccttaaattagatga--tcggactctacaagattgctcct 214  Q
    |||||| |||| |||||||||||||| |||| |||||||||  || ||||||||||| ||||||||    
T  8866 attagataaagctagtcccacccttaacttagattagatgatttcagactctacaagcttgctcct 8931  T

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Target: scaffold0555 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 151 - 196
Target Start/End: Complemental strand, 8776 - 8731
Alignment:
Q  151 attagagaaagttagtcccacccttaccttaaattagatgatcgga 196  Q
    ||||||| ||| ||||| ||||||||||||| ||||||||||||||    
T  8776 attagagtaagctagtctcacccttaccttagattagatgatcgga 8731  T

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Target: scaffold1186 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold1186
Description:

Target: scaffold1186; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 181
Target Start/End: Original strand, 2020 - 2072
Alignment:
Q  129 tttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 181  Q
    |||||||||||||||||  |  ||||||||||| ||||| |||||||||||||    
T  2020 tttcagaattatacaacccattattagagaaagctagtctcacccttacctta 2072  T

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Target: scaffold0594 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0594
Description:

Target: scaffold0594; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 181
Target Start/End: Original strand, 2247 - 2299
Alignment:
Q  129 tttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 181  Q
    |||||||||||||||||  |  |||| |||||| |||||||||||||||||||    
T  2247 tttcagaattatacaacccattattatagaaagctagtcccacccttacctta 2299  T

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Target: scaffold0462 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0462
Description:

Target: scaffold0462; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 181
Target Start/End: Original strand, 11223 - 11275
Alignment:
Q  129 tttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 181  Q
    ||||||||||| |  |||| ||||||||||||||||| | |||||||||||||    
T  11223 tttcagaattaaaatacttggaattagagaaagttagactcacccttacctta 11275  T

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Target: scaffold0104 (Bit Score: 29; Significance: 0.0000003; HSPs: 2)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 181
Target Start/End: Original strand, 14957 - 15009
Alignment:
Q  129 tttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 181  Q
    |||||||||| ||||||||||||||| | ||  ||||||||||||| ||||||    
T  14957 tttcagaattctacaacttagaattatataagtttagtcccaccctcacctta 15009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 181
Target Start/End: Original strand, 16977 - 17029
Alignment:
Q  129 tttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 181  Q
    |||||||||| ||||||||||||||| | ||  ||||||||||||| ||||||    
T  16977 tttcagaattctacaacttagaattatataagtttagtcccaccctcacctta 17029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 29; Significance: 0.0000003; HSPs: 2)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 220
Target Start/End: Complemental strand, 39113 - 39054
Alignment:
Q  163 tagtcccacccttaccttaaattagatga--tcggactctacaagattgctcctcttctc 220  Q
    ||||||||||||||||||| ||| | |||  |||||||| ||||| ||||||||||||||    
T  39113 tagtcccacccttaccttagattggttgaattcggactcaacaagcttgctcctcttctc 39054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 220
Target Start/End: Complemental strand, 43805 - 43746
Alignment:
Q  163 tagtcccacccttaccttaaattagatga--tcggactctacaagattgctcctcttctc 220  Q
    ||||||||||||||||||| ||| | |||  || ||||||||||| ||||||||||||||    
T  43805 tagtcccacccttaccttagattggttgaattccgactctacaagcttgctcctcttctc 43746  T

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Target: scaffold0005 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 181
Target Start/End: Complemental strand, 186248 - 186196
Alignment:
Q  129 tttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 181  Q
    |||||||||||||||||  |  ||||||||||| ||||| |||||||||||||    
T  186248 tttcagaattatacaacccattattagagaaagctagtctcacccttacctta 186196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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