View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12634_high_26 (Length: 236)
Name: NF12634_high_26
Description: NF12634
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12634_high_26 |
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Alignment Details
Target: chr8 (Bit Score: 223; Significance: 1e-123; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 30242202 - 30241980
Alignment:
| Q |
1 |
ccatttggttagtcaaaattgttttggtaaaaatgttagcttcatcatttcatgtgacaacatattttgatagaatgaaagaaagtgtttttcatcatta |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30242202 |
ccatttggttagtcaaaattgttttggtaaaaatgttagcttcatcatttcatgtgacaacatattttgatagaatgaaagaaagtgtttttcatcatta |
30242103 |
T |
|
| Q |
101 |
tgtgttggatgcattgtcgggtccaccggtcgaaaatggcgaggaagtatcgaaagagcatcctttgaagggttcaaagacgatgccgccgggtgtgggg |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30242102 |
tgtgttggatgcattgtcgggtccaccggtcgaaaatggcgaggaagtatcgaaagagcatcctttgaagggttcaaagacgatgccgccgggtgtgggg |
30242003 |
T |
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| Q |
201 |
aggtggaagaagatgaagagatt |
223 |
Q |
| |
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||||||||||||||||||||||| |
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| T |
30242002 |
aggtggaagaagatgaagagatt |
30241980 |
T |
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