View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12634_low_13 (Length: 358)

Name: NF12634_low_13
Description: NF12634
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12634_low_13
NF12634_low_13
[»] chr8 (12 HSPs)
chr8 (1-345)||(30890312-30890656)
chr8 (74-124)||(5542603-5542653)
chr8 (64-122)||(9934941-9934999)
chr8 (64-122)||(32896670-32896728)
chr8 (64-122)||(42993443-42993501)
chr8 (64-122)||(32890546-32890604)
chr8 (64-122)||(36818630-36818688)
chr8 (64-133)||(10705496-10705564)
chr8 (64-124)||(14417619-14417678)
chr8 (64-124)||(10699687-10699746)
chr8 (64-124)||(42033455-42033514)
chr8 (74-122)||(1883281-1883329)
[»] chr1 (10 HSPs)
chr1 (64-122)||(1077902-1077960)
chr1 (64-122)||(25275490-25275548)
chr1 (64-122)||(25381979-25382037)
chr1 (64-122)||(25387946-25388004)
chr1 (64-122)||(50305855-50305913)
chr1 (64-124)||(8093288-8093347)
chr1 (64-124)||(27954819-27954878)
chr1 (64-123)||(33458353-33458411)
chr1 (64-124)||(4280172-4280231)
chr1 (70-122)||(24927212-24927264)
[»] chr4 (7 HSPs)
chr4 (62-122)||(24287643-24287703)
chr4 (64-124)||(26957246-26957305)
chr4 (71-122)||(4632040-4632091)
chr4 (65-109)||(19686774-19686818)
chr4 (64-124)||(26971997-26972056)
chr4 (74-119)||(49976269-49976314)
chr4 (64-124)||(50168253-50168312)
[»] scaffold0208 (2 HSPs)
scaffold0208 (64-122)||(12053-12111)
scaffold0208 (74-122)||(6190-6238)
[»] chr7 (4 HSPs)
chr7 (64-122)||(28421402-28421460)
chr7 (74-122)||(5979619-5979667)
chr7 (64-124)||(30219517-30219576)
chr7 (66-106)||(43539655-43539695)
[»] chr6 (10 HSPs)
chr6 (64-122)||(4580765-4580823)
chr6 (64-124)||(8651246-8651305)
chr6 (64-119)||(25353871-25353926)
chr6 (64-133)||(21770998-21771066)
chr6 (74-124)||(21191312-21191362)
chr6 (74-124)||(21197483-21197533)
chr6 (64-119)||(25343285-25343340)
chr6 (64-110)||(17581262-17581308)
chr6 (64-124)||(21783768-21783827)
chr6 (64-124)||(30906023-30906082)
[»] chr5 (10 HSPs)
chr5 (64-122)||(12686622-12686680)
chr5 (64-122)||(12692724-12692782)
chr5 (64-122)||(20499796-20499853)
chr5 (64-122)||(32094665-32094723)
chr5 (70-122)||(22647931-22647983)
chr5 (64-124)||(7389990-7390049)
chr5 (64-122)||(14609789-14609846)
chr5 (74-122)||(19060217-19060265)
chr5 (74-122)||(19066551-19066599)
chr5 (66-106)||(30771940-30771980)
[»] chr3 (14 HSPs)
chr3 (64-122)||(11840169-11840227)
chr3 (64-122)||(17056235-17056293)
chr3 (64-122)||(26429861-26429919)
chr3 (64-122)||(42191664-42191722)
chr3 (64-122)||(42197606-42197664)
chr3 (64-124)||(23138859-23138918)
chr3 (64-122)||(10238656-10238714)
chr3 (64-122)||(10244778-10244836)
chr3 (64-124)||(38449506-38449565)
chr3 (74-124)||(11846419-11846469)
chr3 (74-122)||(17601977-17602025)
chr3 (64-124)||(24643933-24643992)
chr3 (74-122)||(55003845-55003893)
chr3 (62-124)||(28964536-28964597)
[»] chr2 (11 HSPs)
chr2 (64-122)||(13455757-13455815)
chr2 (64-122)||(13461698-13461756)
chr2 (64-122)||(35085123-35085181)
chr2 (64-122)||(35091096-35091154)
chr2 (64-122)||(36750072-36750130)
chr2 (64-124)||(44717248-44717307)
chr2 (70-118)||(23283907-23283955)
chr2 (74-122)||(23343231-23343279)
chr2 (64-124)||(30964985-30965044)
chr2 (82-124)||(8342629-8342671)
chr2 (173-215)||(38731632-38731674)
[»] scaffold0363 (1 HSPs)
scaffold0363 (64-124)||(1041-1100)
[»] scaffold0185 (1 HSPs)
scaffold0185 (64-124)||(5625-5684)


Alignment Details
Target: chr8 (Bit Score: 289; Significance: 1e-162; HSPs: 12)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 289; E-Value: 1e-162
Query Start/End: Original strand, 1 - 345
Target Start/End: Complemental strand, 30890656 - 30890312
Alignment:
Q  1 ttgtcccttgatcctgaacctttgtccttctccattgcactacctgttgaaatgttttaattaaattgtgagtcttaattgattagtaatcaaattaatt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  30890656 ttgtcccttgatcctgaacctttgtccttctccattgcactacctgttgaaatgttttaattaaattgtgagtcttaattgattagtgatcaaattaatt 30890557  T
Q  101 aataagactaattagatttctaatcgaaaaattggcgaattgatatggactcaaatatgcgcaaatgtcattgatgacccatttcagaataatgaaaacc 200  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  30890556 aataagactaattagatttctaattgaaaaattggcgaattgatatggactcaaatatgcgcaaatggcattgatgaccgatttcagaataatgaaaacc 30890457  T
Q  201 ctaattggcaatcaccatttatataggttatggtctccaacatacctgaaattccacattgtctcttctcttcgtttgaagagcgtccgaggcatagaaa 300  Q
    ||||||||||||||||||||||| |||||||||||||||| ||||||||||| |||||||||||||||||||| |||||||||||||| ||||||| |||    
T  30890456 ctaattggcaatcaccatttatacaggttatggtctccaatatacctgaaataccacattgtctcttctcttcatttgaagagcgtccaaggcatataaa 30890357  T
Q  301 gttccgattgagcaagaaacacaagtcactatgcgtctgttacct 345  Q
    ||||||||||||||||||||||||||||  |||| || |||||||    
T  30890356 gttccgattgagcaagaaacacaagtcaacatgcatccgttacct 30890312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 74 - 124
Target Start/End: Complemental strand, 5542653 - 5542603
Alignment:
Q  74 cttaattgattagtaatcaaattaattaataagactaattagatttctaat 124  Q
    |||||||||||||| |||||||||| |||||||||||||||||||||||||    
T  5542653 cttaattgattagtgatcaaattaagtaataagactaattagatttctaat 5542603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 64 - 122
Target Start/End: Original strand, 9934941 - 9934999
Alignment:
Q  64 aattgtgagtcttaattgattagtaatcaaattaattaataagactaattagatttcta 122  Q
    |||||||||||||||||||||||| |||||||||| ||||||  |||||||||||||||    
T  9934941 aattgtgagtcttaattgattagtgatcaaattaagtaataaagctaattagatttcta 9934999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 64 - 122
Target Start/End: Original strand, 32896670 - 32896728
Alignment:
Q  64 aattgtgagtcttaattgattagtaatcaaattaattaataagactaattagatttcta 122  Q
    ||||||||| |||||||||||||| |||||||||| ||||||| |||||||||||||||    
T  32896670 aattgtgagccttaattgattagtgatcaaattaagtaataaggctaattagatttcta 32896728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 64 - 122
Target Start/End: Complemental strand, 42993501 - 42993443
Alignment:
Q  64 aattgtgagtcttaattgattagtaatcaaattaattaataagactaattagatttcta 122  Q
    ||||||||| |||||||||||||| |||||||||| ||||||| |||||||||||||||    
T  42993501 aattgtgagccttaattgattagtgatcaaattaagtaataaggctaattagatttcta 42993443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 64 - 122
Target Start/End: Original strand, 32890546 - 32890604
Alignment:
Q  64 aattgtgagtcttaattgattagtaatcaaattaattaataagactaattagatttcta 122  Q
    ||||||||  |||||||||||||| |||||||||| ||||||| |||||||||||||||    
T  32890546 aattgtgacccttaattgattagtgatcaaattaagtaataaggctaattagatttcta 32890604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 64 - 122
Target Start/End: Original strand, 36818630 - 36818688
Alignment:
Q  64 aattgtgagtcttaattgattagtaatcaaattaattaataagactaattagatttcta 122  Q
    ||||||||| |||||||||||||| |||||||||| |||||||  ||||||||||||||    
T  36818630 aattgtgagccttaattgattagtgatcaaattaagtaataaggttaattagatttcta 36818688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 64 - 133
Target Start/End: Original strand, 10705496 - 10705564
Alignment:
Q  64 aattgtgagtcttaattgattagtaatcaaattaattaataagactaattagatttctaatcgaaaaatt 133  Q
    ||||||||| |||||||||||||| |||||||||| |||||| ||| |||||||||||||| ||| ||||    
T  10705496 aattgtgagccttaattgattagtgatcaaattaagtaataaaact-attagatttctaattgaataatt 10705564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 64 - 124
Target Start/End: Original strand, 14417619 - 14417678
Alignment:
Q  64 aattgtgagtcttaattgattagtaatcaaattaattaataagactaattagatttctaat 124  Q
    |||||||||||||| ||||||||| |||||||||| ||||||| || ||||||||||||||    
T  14417619 aattgtgagtcttagttgattagtgatcaaattaagtaataaggct-attagatttctaat 14417678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 64 - 124
Target Start/End: Original strand, 10699687 - 10699746
Alignment:
Q  64 aattgtgagtcttaattgattagtaatcaaattaattaataagactaattagatttctaat 124  Q
    ||||||||| |||||||||||||| |||||||||| |||| || || ||||||||||||||    
T  10699687 aattgtgagccttaattgattagtgatcaaattaagtaattaggct-attagatttctaat 10699746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 64 - 124
Target Start/End: Original strand, 42033455 - 42033514
Alignment:
Q  64 aattgtgagtcttaattgattagtaatcaaattaattaataagactaattagatttctaat 124  Q
    ||||||||| |||||||||||||| |||||||||| |||||||  | ||||||||||||||    
T  42033455 aattgtgagccttaattgattagtgatcaaattaagtaataag-gttattagatttctaat 42033514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 74 - 122
Target Start/End: Complemental strand, 1883329 - 1883281
Alignment:
Q  74 cttaattgattagtaatcaaattaattaataagactaattagatttcta 122  Q
    |||| ||||||||| |||||||||| ||||||| || ||||||||||||    
T  1883329 cttacttgattagtgatcaaattaagtaataaggcttattagatttcta 1883281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 47; Significance: 9e-18; HSPs: 10)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 64 - 122
Target Start/End: Original strand, 1077902 - 1077960
Alignment:
Q  64 aattgtgagtcttaattgattagtaatcaaattaattaataagactaattagatttcta 122  Q
    ||||||||| |||||||||||||| |||||||||| |||||||||||||||||||||||    
T  1077902 aattgtgagccttaattgattagtgatcaaattaagtaataagactaattagatttcta 1077960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 64 - 122
Target Start/End: Complemental strand, 25275548 - 25275490
Alignment:
Q  64 aattgtgagtcttaattgattagtaatcaaattaattaataagactaattagatttcta 122  Q
    ||||||||| |||||||||||||| |||||||||| ||||||| |||||||||||||||    
T  25275548 aattgtgagccttaattgattagtgatcaaattaagtaataaggctaattagatttcta 25275490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 64 - 122
Target Start/End: Complemental strand, 25382037 - 25381979
Alignment:
Q  64 aattgtgagtcttaattgattagtaatcaaattaattaataagactaattagatttcta 122  Q
    ||||||||| |||||||||||||| |||||||||| ||||||| |||||||||||||||    
T  25382037 aattgtgagccttaattgattagtgatcaaattaagtaataaggctaattagatttcta 25381979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 64 - 122
Target Start/End: Complemental strand, 25388004 - 25387946
Alignment:
Q  64 aattgtgagtcttaattgattagtaatcaaattaattaataagactaattagatttcta 122  Q
    ||||||||| |||||||||||||| |||||||||| ||||||| |||||||||||||||    
T  25388004 aattgtgagccttaattgattagtgatcaaattaagtaataaggctaattagatttcta 25387946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 64 - 122
Target Start/End: Original strand, 50305855 - 50305913
Alignment:
Q  64 aattgtgagtcttaattgattagtaatcaaattaattaataagactaattagatttcta 122  Q
    ||||||||| |||||||||||||| |||||||||| ||||||| |||||||||||||||    
T  50305855 aattgtgagccttaattgattagtgatcaaattaagtaataaggctaattagatttcta 50305913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 64 - 124
Target Start/End: Complemental strand, 8093347 - 8093288
Alignment:
Q  64 aattgtgagtcttaattgattagtaatcaaattaattaataagactaattagatttctaat 124  Q
    |||||||||||||| ||||||| |||||||||||| ||||||| || ||||||||||||||    
T  8093347 aattgtgagtcttagttgattaataatcaaattaagtaataaggct-attagatttctaat 8093288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 64 - 124
Target Start/End: Original strand, 27954819 - 27954878
Alignment:
Q  64 aattgtgagtcttaattgattagtaatcaaattaattaataagactaattagatttctaat 124  Q
    ||||||||| |||||||||||||| |||||||||| ||||||| || ||||||||||||||    
T  27954819 aattgtgaggcttaattgattagtgatcaaattaagtaataaggct-attagatttctaat 27954878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 64 - 123
Target Start/End: Complemental strand, 33458411 - 33458353
Alignment:
Q  64 aattgtgagtcttaattgattagtaatcaaattaattaataagactaattagatttctaa 123  Q
    ||||||||| |||||||||||||| |||||||||| ||||||  || |||||||||||||    
T  33458411 aattgtgagccttaattgattagtgatcaaattaagtaataatgct-attagatttctaa 33458353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 64 - 124
Target Start/End: Complemental strand, 4280231 - 4280172
Alignment:
Q  64 aattgtgagtcttaattgattagtaatcaaattaattaataagactaattagatttctaat 124  Q
    ||||||||  |||||||||||||| |||||||||| |||||||| | ||||||| ||||||    
T  4280231 aattgtgaaccttaattgattagtgatcaaattaagtaataaga-ttattagatatctaat 4280172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 70 - 122
Target Start/End: Complemental strand, 24927264 - 24927212
Alignment:
Q  70 gagtcttaattgattagtaatcaaattaattaataagactaattagatttcta 122  Q
    |||||||||||||||||| |||||||||| ||| ||| || || |||||||||    
T  24927264 gagtcttaattgattagtgatcaaattaagtaacaaggcttataagatttcta 24927212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 45; Significance: 1e-16; HSPs: 7)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 62 - 122
Target Start/End: Original strand, 24287643 - 24287703
Alignment:
Q  62 taaattgtgagtcttaattgattagtaatcaaattaattaataagactaattagatttcta 122  Q
    ||||||||||| |||||||||||||| |||||||||| ||||||| |||||||||||||||    
T  24287643 taaattgtgagccttaattgattagtgatcaaattaagtaataaggctaattagatttcta 24287703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 64 - 124
Target Start/End: Complemental strand, 26957305 - 26957246
Alignment:
Q  64 aattgtgagtcttaattgattagtaatcaaattaattaataagactaattagatttctaat 124  Q
    ||||||||| ||||||| |||||| |||||||||| |||||||||| ||||||||||||||    
T  26957305 aattgtgagccttaattaattagtgatcaaattaagtaataagact-attagatttctaat 26957246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 71 - 122
Target Start/End: Original strand, 4632040 - 4632091
Alignment:
Q  71 agtcttaattgattagtaatcaaattaattaataagactaattagatttcta 122  Q
    |||||||||||||||||||||||||||| |||||||  | ||||||||||||    
T  4632040 agtcttaattgattagtaatcaaattaagtaataaggtttattagatttcta 4632091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 65 - 109
Target Start/End: Complemental strand, 19686818 - 19686774
Alignment:
Q  65 attgtgagtcttaattgattagtaatcaaattaattaataagact 109  Q
    |||||| |||||||||||||||| |||||||||| ||||||||||    
T  19686818 attgtgtgtcttaattgattagtgatcaaattaaataataagact 19686774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 64 - 124
Target Start/End: Complemental strand, 26972056 - 26971997
Alignment:
Q  64 aattgtgagtcttaattgattagtaatcaaattaattaataagactaattagatttctaat 124  Q
    |||||||||||||||||||||||| |||||||||| | |||||  | ||||||||||||||    
T  26972056 aattgtgagtcttaattgattagtgatcaaattaagtgataaggat-attagatttctaat 26971997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 74 - 119
Target Start/End: Original strand, 49976269 - 49976314
Alignment:
Q  74 cttaattgattagtaatcaaattaattaataagactaattagattt 119  Q
    |||||||||||||| |||||||||| ||||||| || |||||||||    
T  49976269 cttaattgattagtgatcaaattaagtaataaggcttattagattt 49976314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 64 - 124
Target Start/End: Original strand, 50168253 - 50168312
Alignment:
Q  64 aattgtgagtcttaattgattagtaatcaaattaattaataagactaattagatttctaat 124  Q
    ||||||||||||||||||||||||  |||||| || ||| ||| || ||||||||||||||    
T  50168253 aattgtgagtcttaattgattagtggtcaaatcaagtaacaaggct-attagatttctaat 50168312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0208 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0208
Description:

Target: scaffold0208; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 64 - 122
Target Start/End: Original strand, 12053 - 12111
Alignment:
Q  64 aattgtgagtcttaattgattagtaatcaaattaattaataagactaattagatttcta 122  Q
    ||||||||| |||||||||||||| |||||||||| ||||||| |||||||||||||||    
T  12053 aattgtgagccttaattgattagtgatcaaattaagtaataaggctaattagatttcta 12111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0208; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 74 - 122
Target Start/End: Original strand, 6190 - 6238
Alignment:
Q  74 cttaattgattagtaatcaaattaattaataagactaattagatttcta 122  Q
    |||||||||||||| |||||||||| ||||||| |||||||||||||||    
T  6190 cttaattgattagtgatcaaattaagtaataaggctaattagatttcta 6238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 4)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 64 - 122
Target Start/End: Complemental strand, 28421460 - 28421402
Alignment:
Q  64 aattgtgagtcttaattgattagtaatcaaattaattaataagactaattagatttcta 122  Q
    ||||||||| |||||||||||||| |||||||||| ||||||| |||||||||||||||    
T  28421460 aattgtgagccttaattgattagtgatcaaattaagtaataaggctaattagatttcta 28421402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 74 - 122
Target Start/End: Complemental strand, 5979667 - 5979619
Alignment:
Q  74 cttaattgattagtaatcaaattaattaataagactaattagatttcta 122  Q
    |||||||||||||| |||||||||| ||||||| |||||||||||||||    
T  5979667 cttaattgattagtgatcaaattaagtaataaggctaattagatttcta 5979619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 64 - 124
Target Start/End: Complemental strand, 30219576 - 30219517
Alignment:
Q  64 aattgtgagtcttaattgattagtaatcaaattaattaataagactaattagatttctaat 124  Q
    ||||||||| |||||||||||||| |||||||||| | |||| | | ||||||||||||||    
T  30219576 aattgtgagccttaattgattagtgatcaaattaagttataa-agttattagatttctaat 30219517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 66 - 106
Target Start/End: Original strand, 43539655 - 43539695
Alignment:
Q  66 ttgtgagtcttaattgattagtaatcaaattaattaataag 106  Q
    ||||||| |||||||||||||| |||||||||| |||||||    
T  43539655 ttgtgagccttaattgattagtgatcaaattaagtaataag 43539695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 10)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 64 - 122
Target Start/End: Complemental strand, 4580823 - 4580765
Alignment:
Q  64 aattgtgagtcttaattgattagtaatcaaattaattaataagactaattagatttcta 122  Q
    ||||||||| |||||||||||||| |||||||||| ||||||| |||||||||||||||    
T  4580823 aattgtgagccttaattgattagtgatcaaattaagtaataaggctaattagatttcta 4580765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 64 - 124
Target Start/End: Complemental strand, 8651305 - 8651246
Alignment:
Q  64 aattgtgagtcttaattgattagtaatcaaattaattaataagactaattagatttctaat 124  Q
    |||||||||||||| ||||||||| |||||||||| |||||||||| ||||||||||||||    
T  8651305 aattgtgagtcttagttgattagtgatcaaattaagtaataagact-attagatttctaat 8651246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 64 - 119
Target Start/End: Original strand, 25353871 - 25353926
Alignment:
Q  64 aattgtgagtcttaattgattagtaatcaaattaattaataagactaattagattt 119  Q
    ||||||||| |||||||||||||| |||||||||| ||||||| ||||||||||||    
T  25353871 aattgtgagccttaattgattagtgatcaaattaagtaataaggctaattagattt 25353926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 64 - 133
Target Start/End: Complemental strand, 21771066 - 21770998
Alignment:
Q  64 aattgtgagtcttaattgattagtaatcaaattaattaataagactaattagatttctaatcgaaaaatt 133  Q
    ||||||||| |||||||||||||| |||||||||| |||||| ||| |||||||||||||| ||| ||||    
T  21771066 aattgtgagccttaattgattagtgatcaaattaagtaataaaact-attagatttctaattgaataatt 21770998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 74 - 124
Target Start/End: Complemental strand, 21191362 - 21191312
Alignment:
Q  74 cttaattgattagtaatcaaattaattaataagactaattagatttctaat 124  Q
    |||||||||||||| |||||||||| ||||| | |||||||||||||||||    
T  21191362 cttaattgattagtgatcaaattaagtaatatggctaattagatttctaat 21191312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 74 - 124
Target Start/End: Complemental strand, 21197533 - 21197483
Alignment:
Q  74 cttaattgattagtaatcaaattaattaataagactaattagatttctaat 124  Q
    ||||| |||||||| |||||||||| ||||||| |||||||||||||||||    
T  21197533 cttaactgattagtgatcaaattaagtaataaggctaattagatttctaat 21197483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 64 - 119
Target Start/End: Original strand, 25343285 - 25343340
Alignment:
Q  64 aattgtgagtcttaattgattagtaatcaaattaattaataagactaattagattt 119  Q
    ||||||||  |||||||||||||| || ||||||| ||||||| ||||||||||||    
T  25343285 aattgtgaaccttaattgattagtgattaaattaagtaataaggctaattagattt 25343340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 64 - 110
Target Start/End: Original strand, 17581262 - 17581308
Alignment:
Q  64 aattgtgagtcttaattgattagtaatcaaattaattaataagacta 110  Q
    ||||||||| || ||||||||||| |||||||||| |||||||||||    
T  17581262 aattgtgagcctcaattgattagtgatcaaattaagtaataagacta 17581308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 64 - 124
Target Start/End: Complemental strand, 21783827 - 21783768
Alignment:
Q  64 aattgtgagtcttaattgattagtaatcaaattaattaataagactaattagatttctaat 124  Q
    |||||||||||||| | ||||||| |||||||||| |||||| ||| |||| |||||||||    
T  21783827 aattgtgagtcttagtggattagtgatcaaattaagtaataaaact-attaaatttctaat 21783768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 64 - 124
Target Start/End: Complemental strand, 30906082 - 30906023
Alignment:
Q  64 aattgtgagtcttaattgattagtaatcaaattaattaataagactaattagatttctaat 124  Q
    ||||||||| |||| ||||||||||| ||||| || ||||||| || ||||||||||||||    
T  30906082 aattgtgagccttagttgattagtaaccaaataaagtaataaggct-attagatttctaat 30906023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 10)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 64 - 122
Target Start/End: Complemental strand, 12686680 - 12686622
Alignment:
Q  64 aattgtgagtcttaattgattagtaatcaaattaattaataagactaattagatttcta 122  Q
    ||||||||| |||||||||||||| |||||||||| ||||||| |||||||||||||||    
T  12686680 aattgtgagccttaattgattagtgatcaaattaagtaataaggctaattagatttcta 12686622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 64 - 122
Target Start/End: Complemental strand, 12692782 - 12692724
Alignment:
Q  64 aattgtgagtcttaattgattagtaatcaaattaattaataagactaattagatttcta 122  Q
    ||||||||| |||||||||||||| |||||||||| ||||||| |||||||||||||||    
T  12692782 aattgtgagccttaattgattagtgatcaaattaagtaataaggctaattagatttcta 12692724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 64 - 122
Target Start/End: Original strand, 20499796 - 20499853
Alignment:
Q  64 aattgtgagtcttaattgattagtaatcaaattaattaataagactaattagatttcta 122  Q
    |||||||||||||||||||||||| |||||||||| |||||||||| ||||||||||||    
T  20499796 aattgtgagtcttaattgattagtgatcaaattaagtaataagact-attagatttcta 20499853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 64 - 122
Target Start/End: Complemental strand, 32094723 - 32094665
Alignment:
Q  64 aattgtgagtcttaattgattagtaatcaaattaattaataagactaattagatttcta 122  Q
    ||||||||| |||||||||||||| |||||||||| ||||||| |||||||||||||||    
T  32094723 aattgtgagccttaattgattagtgatcaaattaagtaataaggctaattagatttcta 32094665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 70 - 122
Target Start/End: Complemental strand, 22647983 - 22647931
Alignment:
Q  70 gagtcttaattgattagtaatcaaattaattaataagactaattagatttcta 122  Q
    ||||||||||| |||||| |||||||||| |||||||||||||||||||||||    
T  22647983 gagtcttaattaattagttatcaaattaagtaataagactaattagatttcta 22647931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 64 - 124
Target Start/End: Complemental strand, 7390049 - 7389990
Alignment:
Q  64 aattgtgagtcttaattgattagtaatcaaattaattaataagactaattagatttctaat 124  Q
    |||||||||||||| ||||||||| |||||||||| ||||||| || ||||||||||||||    
T  7390049 aattgtgagtcttagttgattagtgatcaaattaagtaataaggct-attagatttctaat 7389990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 64 - 122
Target Start/End: Original strand, 14609789 - 14609846
Alignment:
Q  64 aattgtgagtcttaattgattagtaatcaaattaattaataagactaattagatttcta 122  Q
    ||||||||| |||||||||||||| |||||||||| |||||| ||| ||||||||||||    
T  14609789 aattgtgagccttaattgattagtgatcaaattaagtaataaaact-attagatttcta 14609846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 74 - 122
Target Start/End: Complemental strand, 19060265 - 19060217
Alignment:
Q  74 cttaattgattagtaatcaaattaattaataagactaattagatttcta 122  Q
    |||||||||||||| |||||||||| ||||||| || ||||||||||||    
T  19060265 cttaattgattagtgatcaaattaagtaataaggcttattagatttcta 19060217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 74 - 122
Target Start/End: Complemental strand, 19066599 - 19066551
Alignment:
Q  74 cttaattgattagtaatcaaattaattaataagactaattagatttcta 122  Q
    |||||||||||||| |||||||||| ||| ||| || ||||||||||||    
T  19066599 cttaattgattagtgatcaaattaagtaacaaggcttattagatttcta 19066551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 66 - 106
Target Start/End: Original strand, 30771940 - 30771980
Alignment:
Q  66 ttgtgagtcttaattgattagtaatcaaattaattaataag 106  Q
    ||||||| |||||||||||||| |||||||||| |||||||    
T  30771940 ttgtgagccttaattgattagtgatcaaattaagtaataag 30771980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 14)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 64 - 122
Target Start/End: Complemental strand, 11840227 - 11840169
Alignment:
Q  64 aattgtgagtcttaattgattagtaatcaaattaattaataagactaattagatttcta 122  Q
    ||||||||| |||||||||||||| |||||||||| ||||||| |||||||||||||||    
T  11840227 aattgtgagccttaattgattagtgatcaaattaagtaataaggctaattagatttcta 11840169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 64 - 122
Target Start/End: Complemental strand, 17056293 - 17056235
Alignment:
Q  64 aattgtgagtcttaattgattagtaatcaaattaattaataagactaattagatttcta 122  Q
    ||||||||| |||||||||||||| |||||||||| ||||||| |||||||||||||||    
T  17056293 aattgtgagccttaattgattagtgatcaaattaagtaataaggctaattagatttcta 17056235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 64 - 122
Target Start/End: Complemental strand, 26429919 - 26429861
Alignment:
Q  64 aattgtgagtcttaattgattagtaatcaaattaattaataagactaattagatttcta 122  Q
    ||||||||| |||||||||||||| |||||||||| ||||||| |||||||||||||||    
T  26429919 aattgtgagccttaattgattagtgatcaaattaagtaataaggctaattagatttcta 26429861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 64 - 122
Target Start/End: Complemental strand, 42191722 - 42191664
Alignment:
Q  64 aattgtgagtcttaattgattagtaatcaaattaattaataagactaattagatttcta 122  Q
    ||||||||| |||||||||||||| |||||||||| ||||||| |||||||||||||||    
T  42191722 aattgtgagccttaattgattagtgatcaaattaagtaataaggctaattagatttcta 42191664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 64 - 122
Target Start/End: Complemental strand, 42197664 - 42197606
Alignment:
Q  64 aattgtgagtcttaattgattagtaatcaaattaattaataagactaattagatttcta 122  Q
    ||||||||| |||||||||||||| |||||||||| ||||||| |||||||||||||||    
T  42197664 aattgtgagccttaattgattagtgatcaaattaagtaataaggctaattagatttcta 42197606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 64 - 124
Target Start/End: Complemental strand, 23138918 - 23138859
Alignment:
Q  64 aattgtgagtcttaattgattagtaatcaaattaattaataagactaattagatttctaat 124  Q
    |||||||||||||| ||||||||| |||||||||| |||||||||| ||||||||||||||    
T  23138918 aattgtgagtcttagttgattagtgatcaaattaagtaataagact-attagatttctaat 23138859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 64 - 122
Target Start/End: Complemental strand, 10238714 - 10238656
Alignment:
Q  64 aattgtgagtcttaattgattagtaatcaaattaattaataagactaattagatttcta 122  Q
    ||||||||| ||||||||||||||  ||||||||| ||||||| |||||||||||||||    
T  10238714 aattgtgagccttaattgattagtgttcaaattaagtaataaggctaattagatttcta 10238656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 64 - 122
Target Start/End: Complemental strand, 10244836 - 10244778
Alignment:
Q  64 aattgtgagtcttaattgattagtaatcaaattaattaataagactaattagatttcta 122  Q
    ||||||||| ||||||||||||||  ||||||||| ||||||| |||||||||||||||    
T  10244836 aattgtgagccttaattgattagtgttcaaattaagtaataaggctaattagatttcta 10244778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 64 - 124
Target Start/End: Complemental strand, 38449565 - 38449506
Alignment:
Q  64 aattgtgagtcttaattgattagtaatcaaattaattaataagactaattagatttctaat 124  Q
    |||||||||||||| ||||||||| |||||||||| ||||||| || ||||||||||||||    
T  38449565 aattgtgagtcttagttgattagtgatcaaattaagtaataaggct-attagatttctaat 38449506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 74 - 124
Target Start/End: Complemental strand, 11846469 - 11846419
Alignment:
Q  74 cttaattgattagtaatcaaattaattaataagactaattagatttctaat 124  Q
    |||||| ||||||| |||||||||| ||||||| |||||||||||||||||    
T  11846469 cttaatggattagtgatcaaattaagtaataaggctaattagatttctaat 11846419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 74 - 122
Target Start/End: Complemental strand, 17602025 - 17601977
Alignment:
Q  74 cttaattgattagtaatcaaattaattaataagactaattagatttcta 122  Q
    ||||||||||||||  ||||||||| ||||||| |||||||||||||||    
T  17602025 cttaattgattagtggtcaaattaagtaataaggctaattagatttcta 17601977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 64 - 124
Target Start/End: Complemental strand, 24643992 - 24643933
Alignment:
Q  64 aattgtgagtcttaattgattagtaatcaaattaattaataagactaattagatttctaat 124  Q
    |||||||||||||| ||||||||| |||||||||| ||| ||| || ||||||||||||||    
T  24643992 aattgtgagtcttagttgattagtgatcaaattaagtaacaaggct-attagatttctaat 24643933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 74 - 122
Target Start/End: Complemental strand, 55003893 - 55003845
Alignment:
Q  74 cttaattgattagtaatcaaattaattaataagactaattagatttcta 122  Q
    ||||||| |||||| |||||||||| ||||||| |||||||||||||||    
T  55003893 cttaatttattagtgatcaaattaagtaataaggctaattagatttcta 55003845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 62 - 124
Target Start/End: Original strand, 28964536 - 28964597
Alignment:
Q  62 taaattgtgagtcttaattgattagtaatcaaattaattaataagactaattagatttctaat 124  Q
    ||||||||||| |||| ||||||||| |||||||||| |||||| | | ||||||||||||||    
T  28964536 taaattgtgagccttagttgattagtgatcaaattaagtaataa-agttattagatttctaat 28964597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 11)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 64 - 122
Target Start/End: Original strand, 13455757 - 13455815
Alignment:
Q  64 aattgtgagtcttaattgattagtaatcaaattaattaataagactaattagatttcta 122  Q
    ||||||||| |||||||||||||| |||||||||| ||||||| |||||||||||||||    
T  13455757 aattgtgagccttaattgattagtgatcaaattaagtaataaggctaattagatttcta 13455815  T

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Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 64 - 122
Target Start/End: Original strand, 13461698 - 13461756
Alignment:
Q  64 aattgtgagtcttaattgattagtaatcaaattaattaataagactaattagatttcta 122  Q
    ||||||||| |||||||||||||| |||||||||| ||||||| |||||||||||||||    
T  13461698 aattgtgagccttaattgattagtgatcaaattaagtaataaggctaattagatttcta 13461756  T

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Target: chr2; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 64 - 122
Target Start/End: Complemental strand, 35085181 - 35085123
Alignment:
Q  64 aattgtgagtcttaattgattagtaatcaaattaattaataagactaattagatttcta 122  Q
    ||||||||| |||||||||||||| |||||||||| ||||||| |||||||||||||||    
T  35085181 aattgtgagccttaattgattagtgatcaaattaagtaataaggctaattagatttcta 35085123  T

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Target: chr2; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 64 - 122
Target Start/End: Complemental strand, 35091154 - 35091096
Alignment:
Q  64 aattgtgagtcttaattgattagtaatcaaattaattaataagactaattagatttcta 122  Q
    ||||||||| |||||||||||||| |||||||||| ||||||| |||||||||||||||    
T  35091154 aattgtgagccttaattgattagtgatcaaattaagtaataaggctaattagatttcta 35091096  T

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Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 64 - 122
Target Start/End: Original strand, 36750072 - 36750130
Alignment:
Q  64 aattgtgagtcttaattgattagtaatcaaattaattaataagactaattagatttcta 122  Q
    ||||||||| |||||||||||||| |||||||||| ||||||| |||||||||||||||    
T  36750072 aattgtgagccttaattgattagtgatcaaattaagtaataaggctaattagatttcta 36750130  T

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Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 64 - 124
Target Start/End: Complemental strand, 44717307 - 44717248
Alignment:
Q  64 aattgtgagtcttaattgattagtaatcaaattaattaataagactaattagatttctaat 124  Q
    |||||||||||||| ||||||||| |||||||||| ||||||| || ||||||||||||||    
T  44717307 aattgtgagtcttagttgattagtgatcaaattaagtaataaggct-attagatttctaat 44717248  T

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Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 70 - 118
Target Start/End: Original strand, 23283907 - 23283955
Alignment:
Q  70 gagtcttaattgattagtaatcaaattaattaataagactaattagatt 118  Q
    |||||||||||||||||| |||||||||| ||||||| || ||||||||    
T  23283907 gagtcttaattgattagtgatcaaattaagtaataaggcttattagatt 23283955  T

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Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 74 - 122
Target Start/End: Original strand, 23343231 - 23343279
Alignment:
Q  74 cttaattgattagtaatcaaattaattaataagactaattagatttcta 122  Q
    |||||||||||||| |||||||||| ||||||| || ||||||||||||    
T  23343231 cttaattgattagtgatcaaattaagtaataaggcttattagatttcta 23343279  T

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Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 64 - 124
Target Start/End: Original strand, 30964985 - 30965044
Alignment:
Q  64 aattgtgagtcttaattgattagtaatcaaattaattaataagactaattagatttctaat 124  Q
    ||||||| | |||| ||||||||| |||||||||| |||||||||| ||||||||||||||    
T  30964985 aattgtgggccttagttgattagtgatcaaattaagtaataagact-attagatttctaat 30965044  T

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Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 82 - 124
Target Start/End: Complemental strand, 8342671 - 8342629
Alignment:
Q  82 attagtaatcaaattaattaataagactaattagatttctaat 124  Q
    |||||| |||||||||| |||||||| ||||||||||||||||    
T  8342671 attagtgatcaaattaaataataagattaattagatttctaat 8342629  T

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Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 173 - 215
Target Start/End: Original strand, 38731632 - 38731674
Alignment:
Q  173 gatgacccatttcagaataatgaaaaccctaattggcaatcac 215  Q
    ||||||| |||||||| |||||||||||||||||| |||||||    
T  38731632 gatgacctatttcagagtaatgaaaaccctaattgacaatcac 38731674  T

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Target: scaffold0363 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0363
Description:

Target: scaffold0363; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 64 - 124
Target Start/End: Complemental strand, 1100 - 1041
Alignment:
Q  64 aattgtgagtcttaattgattagtaatcaaattaattaataagactaattagatttctaat 124  Q
    |||||||||||||| ||||||||| |||||||||| ||||||| || ||||||||||||||    
T  1100 aattgtgagtcttagttgattagtgatcaaattaagtaataaggct-attagatttctaat 1041  T

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Target: scaffold0185 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0185
Description:

Target: scaffold0185; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 64 - 124
Target Start/End: Original strand, 5625 - 5684
Alignment:
Q  64 aattgtgagtcttaattgattagtaatcaaattaattaataagactaattagatttctaat 124  Q
    ||||||||| |||||||||||||| |||||||||| ||||| |||| ||||||||||||||    
T  5625 aattgtgagccttaattgattagtgatcaaattaagtaatatgact-attagatttctaat 5684  T

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