View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12634_low_14 (Length: 346)

Name: NF12634_low_14
Description: NF12634
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12634_low_14
NF12634_low_14
[»] chr2 (51 HSPs)
chr2 (19-201)||(28740309-28740491)
chr2 (19-188)||(7026606-7026775)
chr2 (19-201)||(3463673-3463856)
chr2 (19-201)||(13833448-13833630)
chr2 (19-201)||(18177269-18177461)
chr2 (19-201)||(28844557-28844749)
chr2 (19-195)||(33135625-33135811)
chr2 (19-190)||(26788786-26788969)
chr2 (19-201)||(25288161-25288353)
chr2 (19-200)||(10657408-10657599)
chr2 (20-201)||(6224583-6224755)
chr2 (96-201)||(379016-379121)
chr2 (19-148)||(3574849-3574978)
chr2 (19-195)||(10125322-10125500)
chr2 (19-161)||(12407382-12407524)
chr2 (19-161)||(16269693-16269835)
chr2 (19-161)||(24776357-24776499)
chr2 (19-161)||(5093113-5093255)
chr2 (19-161)||(20605238-20605380)
chr2 (19-161)||(31170690-31170832)
chr2 (19-201)||(215254-215433)
chr2 (19-161)||(14198643-14198785)
chr2 (19-161)||(22551829-22551971)
chr2 (19-161)||(35317064-35317206)
chr2 (19-161)||(43847648-43847790)
chr2 (19-161)||(44765777-44765919)
chr2 (19-160)||(305532-305673)
chr2 (19-161)||(1789444-1789586)
chr2 (19-161)||(9120128-9120270)
chr2 (95-161)||(32125331-32125397)
chr2 (90-146)||(21370631-21370687)
chr2 (107-198)||(43078653-43078754)
chr2 (20-174)||(26601253-26601407)
chr2 (19-69)||(20605154-20605204)
chr2 (38-74)||(24193595-24193631)
chr2 (19-71)||(24776315-24776367)
chr2 (19-69)||(7026564-7026614)
chr2 (94-148)||(8172213-8172267)
chr2 (19-69)||(10125492-10125542)
chr2 (19-69)||(26788744-26788794)
chr2 (19-69)||(32125252-32125302)
chr2 (19-71)||(5093245-5093297)
chr2 (38-74)||(11534881-11534917)
chr2 (19-71)||(12407340-12407392)
chr2 (19-71)||(16269651-16269703)
chr2 (19-71)||(20605112-20605164)
chr2 (19-71)||(20605196-20605248)
chr2 (38-74)||(29940991-29941027)
chr2 (19-71)||(31170822-31170874)
chr2 (38-74)||(34028935-34028971)
chr2 (38-74)||(45546977-45547013)
[»] chr5 (32 HSPs)
chr5 (19-201)||(4240475-4240657)
chr5 (19-201)||(5949110-5949291)
chr5 (19-201)||(40013725-40013907)
chr5 (19-201)||(14000118-14000310)
chr5 (19-200)||(13925932-13926123)
chr5 (19-201)||(1461161-1461343)
chr5 (19-198)||(22746298-22746479)
chr5 (19-201)||(1152116-1152308)
chr5 (19-201)||(4550270-4550462)
chr5 (19-197)||(7947590-7947778)
chr5 (19-201)||(37013915-37014087)
chr5 (45-201)||(39852372-39852538)
chr5 (19-161)||(21147068-21147210)
chr5 (19-161)||(5272982-5273124)
chr5 (19-161)||(14465290-14465432)
chr5 (19-159)||(139274-139414)
chr5 (19-161)||(27459013-27459154)
chr5 (19-161)||(7016802-7016944)
chr5 (19-158)||(6460793-6460932)
chr5 (19-161)||(32157960-32158103)
chr5 (31-161)||(33656104-33656234)
chr5 (19-200)||(9220731-9220912)
chr5 (96-161)||(849225-849290)
chr5 (90-160)||(9689730-9689799)
chr5 (19-71)||(5273114-5273166)
chr5 (38-74)||(17518474-17518510)
chr5 (19-69)||(40013899-40013949)
chr5 (41-74)||(9689338-9689371)
chr5 (41-74)||(28594444-28594477)
chr5 (19-71)||(21147026-21147078)
chr5 (19-71)||(33656238-33656290)
chr5 (38-74)||(40410636-40410672)
[»] chr3 (88 HSPs)
chr3 (19-201)||(10728665-10728847)
chr3 (19-201)||(39038040-39038222)
chr3 (19-201)||(36674144-36674336)
chr3 (19-201)||(50762074-50762256)
chr3 (19-201)||(37454861-37455043)
chr3 (19-201)||(34484044-34484236)
chr3 (19-175)||(10660535-10660691)
chr3 (22-201)||(40897147-40897336)
chr3 (19-201)||(11431526-11431718)
chr3 (19-201)||(44906527-44906719)
chr3 (20-198)||(20832993-20833181)
chr3 (19-201)||(26107261-26107453)
chr3 (19-201)||(52810378-52810570)
chr3 (21-201)||(32580179-32580368)
chr3 (19-161)||(52618029-52618171)
chr3 (19-201)||(17946288-17946480)
chr3 (19-198)||(51737743-51737933)
chr3 (19-198)||(48379157-48379346)
chr3 (19-194)||(23753427-23753592)
chr3 (19-195)||(31646304-31646490)
chr3 (19-201)||(54628843-54629036)
chr3 (39-201)||(18749632-18749804)
chr3 (19-201)||(50903254-50903449)
chr3 (27-193)||(44276397-44276559)
chr3 (19-161)||(6035117-6035259)
chr3 (90-201)||(39842508-39842619)
chr3 (43-153)||(539476-539586)
chr3 (19-161)||(29030006-29030147)
chr3 (19-161)||(996150-996292)
chr3 (19-161)||(19253827-19253969)
chr3 (19-161)||(20498209-20498351)
chr3 (19-161)||(37820541-37820683)
chr3 (19-195)||(6975749-6975922)
chr3 (19-161)||(3999709-3999851)
chr3 (19-161)||(40246844-40246986)
chr3 (24-193)||(15492889-15493061)
chr3 (19-161)||(10139210-10139352)
chr3 (19-161)||(25418366-25418508)
chr3 (19-161)||(35337735-35337877)
chr3 (90-200)||(27899415-27899525)
chr3 (19-161)||(33807862-33808005)
chr3 (19-158)||(33996608-33996747)
chr3 (96-161)||(5825139-5825204)
chr3 (19-161)||(6589564-6589706)
chr3 (43-201)||(3206219-3206387)
chr3 (19-159)||(53929194-53929334)
chr3 (19-122)||(12103629-12103732)
chr3 (19-161)||(29448922-29449064)
chr3 (19-157)||(1440020-1440159)
chr3 (23-161)||(52114532-52114671)
chr3 (19-161)||(44762101-44762243)
chr3 (19-161)||(51699544-51699685)
chr3 (19-161)||(54625592-54625734)
chr3 (19-77)||(18749570-18749628)
chr3 (148-201)||(45862980-45863033)
chr3 (95-183)||(52080003-52080091)
chr3 (32-157)||(55235198-55235322)
chr3 (95-161)||(22057838-22057904)
chr3 (90-146)||(23535890-23535946)
chr3 (19-60)||(27240408-27240449)
chr3 (114-161)||(1439958-1440005)
chr3 (19-69)||(6131327-6131377)
chr3 (19-71)||(3206392-3206444)
chr3 (19-71)||(23753582-23753634)
chr3 (19-63)||(27899386-27899430)
chr3 (17-71)||(3999841-3999895)
chr3 (19-69)||(10660493-10660543)
chr3 (19-69)||(36674328-36674378)
chr3 (140-201)||(6131247-6131308)
chr3 (24-69)||(6975712-6975757)
chr3 (37-74)||(19552150-19552187)
chr3 (19-64)||(44276347-44276392)
chr3 (19-71)||(1440149-1440200)
chr3 (19-71)||(10139342-10139394)
chr3 (19-71)||(19253785-19253837)
chr3 (38-74)||(26555860-26555896)
chr3 (38-74)||(27593198-27593234)
chr3 (38-74)||(30588885-30588921)
chr3 (19-71)||(35337693-35337745)
chr3 (38-74)||(36055009-36055045)
chr3 (38-74)||(36786017-36786053)
chr3 (19-71)||(37820673-37820725)
chr3 (38-74)||(38629802-38629838)
chr3 (38-74)||(38682472-38682508)
chr3 (19-71)||(44762233-44762285)
chr3 (38-74)||(50900449-50900485)
chr3 (42-74)||(52024201-52024233)
chr3 (38-74)||(53184075-53184111)
[»] chr8 (58 HSPs)
chr8 (19-201)||(18305984-18306166)
chr8 (19-201)||(7466336-7466518)
chr8 (19-201)||(16362197-16362379)
chr8 (19-201)||(14782148-14782340)
chr8 (19-201)||(44725823-44726015)
chr8 (19-201)||(32497526-32497708)
chr8 (19-201)||(42305808-42305990)
chr8 (19-198)||(18958743-18958932)
chr8 (19-201)||(9288470-9288662)
chr8 (19-201)||(19717894-19718086)
chr8 (19-201)||(39467481-39467673)
chr8 (19-201)||(10295393-10295586)
chr8 (43-201)||(37857144-37857302)
chr8 (19-198)||(4031294-4031463)
chr8 (19-198)||(31623696-31623865)
chr8 (19-189)||(26856067-26856248)
chr8 (19-201)||(4403108-4403300)
chr8 (19-201)||(43166703-43166895)
chr8 (19-201)||(43959659-43959840)
chr8 (19-161)||(26374493-26374635)
chr8 (19-161)||(10392300-10392442)
chr8 (19-161)||(24501876-24502018)
chr8 (19-161)||(42938180-42938322)
chr8 (19-161)||(2704882-2705024)
chr8 (19-201)||(41479098-41479280)
chr8 (19-161)||(7506962-7507104)
chr8 (19-161)||(23115232-23115373)
chr8 (19-161)||(42937354-42937494)
chr8 (19-161)||(42735340-42735482)
chr8 (19-148)||(32711358-32711487)
chr8 (19-161)||(5576683-5576826)
chr8 (96-161)||(8410461-8410526)
chr8 (19-158)||(39189881-39190018)
chr8 (90-159)||(13478315-13478384)
chr8 (90-161)||(4950079-4950150)
chr8 (19-69)||(14782332-14782382)
chr8 (19-69)||(18958924-18958974)
chr8 (19-69)||(19718078-19718128)
chr8 (19-69)||(44726007-44726057)
chr8 (41-74)||(14061595-14061628)
chr8 (38-74)||(1606015-1606051)
chr8 (38-74)||(2112837-2112873)
chr8 (21-69)||(4031455-4031503)
chr8 (19-71)||(5576816-5576868)
chr8 (99-147)||(9770497-9770545)
chr8 (19-71)||(23115363-23115415)
chr8 (38-74)||(29260278-29260314)
chr8 (19-71)||(32711477-32711529)
chr8 (38-74)||(35142088-35142124)
chr8 (41-73)||(38806882-38806914)
chr8 (165-201)||(39189829-39189865)
chr8 (91-147)||(41070018-41070074)
chr8 (38-74)||(41386872-41386908)
chr8 (38-74)||(42275018-42275054)
chr8 (19-71)||(42735472-42735524)
chr8 (19-71)||(42938312-42938364)
chr8 (38-74)||(43605366-43605402)
chr8 (19-71)||(43959617-43959669)
[»] chr7 (82 HSPs)
chr7 (19-201)||(44121923-44122105)
chr7 (19-201)||(509651-509833)
chr7 (19-198)||(37327922-37328101)
chr7 (19-201)||(23101293-23101485)
chr7 (19-201)||(40460730-40460912)
chr7 (19-201)||(46405454-46405636)
chr7 (19-201)||(28342342-28342534)
chr7 (19-201)||(29614777-29614969)
chr7 (19-201)||(39784094-39784286)
chr7 (19-201)||(33892273-33892455)
chr7 (19-201)||(3022921-3023113)
chr7 (19-200)||(29585510-29585690)
chr7 (19-195)||(19251534-19251710)
chr7 (19-195)||(39028092-39028268)
chr7 (19-201)||(18838384-18838576)
chr7 (19-201)||(33382632-33382824)
chr7 (19-195)||(9882255-9882441)
chr7 (19-201)||(8675328-8675520)
chr7 (19-201)||(28034818-28035010)
chr7 (19-198)||(7993137-7993326)
chr7 (19-161)||(12963696-12963838)
chr7 (19-187)||(3797093-3797262)
chr7 (20-161)||(10068462-10068604)
chr7 (19-201)||(12740368-12740559)
chr7 (19-161)||(32883777-32883919)
chr7 (19-201)||(17001056-17001228)
chr7 (19-201)||(47066698-47066871)
chr7 (20-201)||(44256779-44256970)
chr7 (19-161)||(30440798-30440940)
chr7 (19-201)||(41827309-41827491)
chr7 (19-161)||(43581153-43581295)
chr7 (19-201)||(973186-973378)
chr7 (19-159)||(40996714-40996854)
chr7 (19-201)||(9179875-9180057)
chr7 (19-161)||(20275326-20275468)
chr7 (19-161)||(47914268-47914410)
chr7 (20-157)||(10676487-10676624)
chr7 (19-161)||(44343459-44343601)
chr7 (19-161)||(47879170-47879312)
chr7 (19-160)||(12893410-12893551)
chr7 (37-161)||(7718425-7718549)
chr7 (95-161)||(32142980-32143046)
chr7 (19-161)||(34009014-34009157)
chr7 (31-161)||(7719323-7719453)
chr7 (19-161)||(18914798-18914940)
chr7 (19-161)||(25805687-25805829)
chr7 (19-161)||(34695275-34695417)
chr7 (96-193)||(43187378-43187485)
chr7 (110-201)||(37972880-37972981)
chr7 (95-161)||(43679492-43679558)
chr7 (98-195)||(727594-727691)
chr7 (19-200)||(44623300-44623481)
chr7 (90-157)||(31638948-31639015)
chr7 (19-119)||(29893076-29893176)
chr7 (99-201)||(19810874-19810976)
chr7 (93-154)||(447852-447913)
chr7 (96-161)||(39219440-39219504)
chr7 (95-161)||(7113530-7113596)
chr7 (19-69)||(48117748-48117798)
chr7 (19-150)||(1470307-1470437)
chr7 (31-73)||(10616955-10616997)
chr7 (19-69)||(12963654-12963704)
chr7 (19-69)||(19251492-19251542)
chr7 (19-69)||(29614961-29615011)
chr7 (19-69)||(34695191-34695241)
chr7 (19-69)||(39784052-39784102)
chr7 (115-148)||(28762618-28762651)
chr7 (115-148)||(28854108-28854141)
chr7 (19-64)||(43187545-43187590)
chr7 (19-67)||(727514-727562)
chr7 (19-71)||(12893368-12893420)
chr7 (19-67)||(18914934-18914982)
chr7 (38-74)||(27418644-27418680)
chr7 (19-71)||(30440756-30440808)
chr7 (41-73)||(32630687-32630719)
chr7 (19-71)||(34008972-34009024)
chr7 (19-71)||(34695233-34695285)
chr7 (38-74)||(40097140-40097176)
chr7 (19-71)||(43581285-43581337)
chr7 (19-71)||(44343591-44343643)
chr7 (19-71)||(47879128-47879180)
chr7 (19-71)||(47914226-47914278)
[»] chr1 (64 HSPs)
chr1 (19-201)||(38536113-38536295)
chr1 (19-201)||(38558331-38558513)
chr1 (19-201)||(29396402-29396594)
chr1 (19-201)||(51701574-51701766)
chr1 (19-201)||(6312568-6312760)
chr1 (19-201)||(25612151-25612343)
chr1 (19-201)||(29219282-29219462)
chr1 (19-201)||(48177476-48177668)
chr1 (19-201)||(18798485-18798657)
chr1 (19-201)||(9322514-9322706)
chr1 (19-201)||(5495120-5495302)
chr1 (19-198)||(46328036-46328225)
chr1 (19-201)||(15835067-15835259)
chr1 (19-201)||(28387407-28387599)
chr1 (19-201)||(48668799-48668978)
chr1 (19-147)||(49230880-49231008)
chr1 (19-201)||(45272581-45272761)
chr1 (19-160)||(9577497-9577638)
chr1 (19-161)||(50192614-50192757)
chr1 (19-161)||(21222141-21222283)
chr1 (19-161)||(35279666-35279808)
chr1 (19-160)||(32589018-32589159)
chr1 (19-161)||(19451872-19452014)
chr1 (19-161)||(28824437-28824578)
chr1 (19-156)||(35679197-35679334)
chr1 (90-201)||(33025578-33025689)
chr1 (19-159)||(37014706-37014846)
chr1 (19-161)||(6304316-6304459)
chr1 (19-161)||(45760073-45760216)
chr1 (19-160)||(730142-730284)
chr1 (19-161)||(47654415-47654558)
chr1 (95-161)||(49198333-49198399)
chr1 (19-161)||(45535938-45536080)
chr1 (93-161)||(31572261-31572329)
chr1 (90-161)||(48524384-48524455)
chr1 (90-161)||(49418149-49418220)
chr1 (90-161)||(51085860-51085931)
chr1 (19-69)||(8141284-8141334)
chr1 (19-161)||(47780705-47780847)
chr1 (99-157)||(29556178-29556236)
chr1 (98-171)||(955823-955896)
chr1 (19-71)||(22183364-22183416)
chr1 (19-148)||(47784381-47784509)
chr1 (112-158)||(43885157-43885203)
chr1 (93-148)||(31622536-31622591)
chr1 (19-69)||(953813-953863)
chr1 (19-71)||(28824568-28824620)
chr1 (19-71)||(49198464-49198515)
chr1 (19-74)||(48524271-48524326)
chr1 (19-69)||(15835251-15835301)
chr1 (19-69)||(19452048-19452098)
chr1 (19-69)||(25612109-25612159)
chr1 (37-74)||(10896845-10896882)
chr1 (115-148)||(17994708-17994741)
chr1 (19-64)||(49198429-49198474)
chr1 (19-71)||(730100-730152)
chr1 (19-71)||(953771-953823)
chr1 (38-74)||(1928406-1928442)
chr1 (19-71)||(14494161-14494213)
chr1 (19-71)||(19452004-19452056)
chr1 (19-71)||(28387589-28387641)
chr1 (19-71)||(35679324-35679376)
chr1 (38-74)||(36402293-36402329)
chr1 (38-74)||(52705439-52705475)
[»] chr4 (86 HSPs)
chr4 (19-201)||(23987214-23987396)
chr4 (19-201)||(50018251-50018433)
chr4 (19-201)||(5441404-5441596)
chr4 (19-201)||(27768056-27768248)
chr4 (19-201)||(54341144-54341336)
chr4 (19-201)||(37828416-37828608)
chr4 (19-195)||(30967329-30967505)
chr4 (19-201)||(51320921-51321113)
chr4 (24-193)||(12913229-12913398)
chr4 (20-201)||(32322092-32322283)
chr4 (19-190)||(49501546-49501717)
chr4 (19-190)||(49507611-49507782)
chr4 (19-198)||(37915827-37916016)
chr4 (19-201)||(54853482-54853674)
chr4 (19-201)||(36479256-36479437)
chr4 (27-162)||(29649730-29649865)
chr4 (19-201)||(32684022-32684193)
chr4 (19-201)||(49834847-49835019)
chr4 (43-197)||(28483923-28484076)
chr4 (19-161)||(44770917-44771060)
chr4 (19-161)||(9163076-9163218)
chr4 (19-201)||(41725125-41725314)
chr4 (19-198)||(5799977-5800157)
chr4 (90-201)||(48261198-48261319)
chr4 (19-201)||(40537174-40537351)
chr4 (19-161)||(19740972-19741114)
chr4 (19-161)||(55302843-55302985)
chr4 (19-161)||(1112893-1113035)
chr4 (19-161)||(25331131-25331273)
chr4 (19-161)||(28370924-28371066)
chr4 (19-161)||(28541698-28541840)
chr4 (20-201)||(31314756-31314933)
chr4 (19-161)||(41881146-41881289)
chr4 (19-161)||(7007374-7007516)
chr4 (19-161)||(12112945-12113087)
chr4 (19-161)||(32950900-32951042)
chr4 (19-161)||(39307317-39307459)
chr4 (19-201)||(46635662-46635848)
chr4 (19-159)||(34228649-34228789)
chr4 (96-190)||(56445380-56445474)
chr4 (19-161)||(22202015-22202157)
chr4 (31-161)||(25446062-25446192)
chr4 (43-161)||(42786708-42786826)
chr4 (19-161)||(39479419-39479563)
chr4 (31-160)||(53275851-53275980)
chr4 (90-161)||(7249829-7249900)
chr4 (90-161)||(41320881-41320952)
chr4 (19-161)||(1044809-1044949)
chr4 (19-161)||(37046515-37046658)
chr4 (20-161)||(30009741-30009882)
chr4 (99-161)||(25504703-25504765)
chr4 (96-161)||(3436670-3436735)
chr4 (19-161)||(23464955-23465097)
chr4 (95-161)||(27454142-27454208)
chr4 (19-77)||(20021344-20021402)
chr4 (22-145)||(41581868-41581991)
chr4 (19-69)||(24131128-24131178)
chr4 (110-157)||(20021424-20021471)
chr4 (110-161)||(24131046-24131097)
chr4 (20-66)||(29855682-29855728)
chr4 (19-69)||(37915785-37915835)
chr4 (131-201)||(24736447-24736527)
chr4 (19-71)||(41881279-41881331)
chr4 (20-71)||(20021303-20021354)
chr4 (19-74)||(37915743-37915798)
chr4 (19-69)||(5441362-5441412)
chr4 (131-161)||(8711978-8712008)
chr4 (19-77)||(11090349-11090407)
chr4 (19-69)||(30967497-30967547)
chr4 (37-74)||(8584007-8584044)
chr4 (140-201)||(8711997-8712058)
chr4 (19-71)||(1044768-1044819)
chr4 (165-201)||(1113049-1113085)
chr4 (19-71)||(19741104-19741156)
chr4 (19-71)||(22201973-22202025)
chr4 (19-71)||(24131168-24131220)
chr4 (19-71)||(25331089-25331141)
chr4 (19-71)||(25504835-25504887)
chr4 (19-71)||(28541656-28541708)
chr4 (19-71)||(32951032-32951084)
chr4 (19-71)||(37046648-37046700)
chr4 (19-71)||(39479553-39479605)
chr4 (38-74)||(40143822-40143858)
chr4 (29-69)||(41320788-41320828)
chr4 (38-74)||(44929923-44929959)
chr4 (38-74)||(54509760-54509796)
[»] chr6 (25 HSPs)
chr6 (19-201)||(31895696-31895888)
chr6 (19-201)||(34773409-34773601)
chr6 (19-199)||(14262448-14262638)
chr6 (19-201)||(30385082-30385262)
chr6 (19-201)||(34759063-34759256)
chr6 (42-201)||(7497099-7497267)
chr6 (93-201)||(31067567-31067675)
chr6 (110-201)||(4200450-4200541)
chr6 (19-161)||(6197541-6197683)
chr6 (21-159)||(7051847-7051985)
chr6 (19-161)||(1391624-1391766)
chr6 (19-161)||(2300801-2300943)
chr6 (19-160)||(28002665-28002806)
chr6 (19-157)||(29076598-29076737)
chr6 (19-157)||(29111571-29111711)
chr6 (93-158)||(3848284-3848348)
chr6 (19-120)||(656966-657066)
chr6 (19-69)||(31895654-31895704)
chr6 (19-69)||(34773367-34773417)
chr6 (115-148)||(34527619-34527652)
chr6 (19-71)||(1391582-1391634)
chr6 (19-71)||(2300933-2300985)
chr6 (19-71)||(6197673-6197725)
chr6 (38-74)||(10644016-10644052)
chr6 (38-74)||(30877898-30877934)
[»] scaffold0306 (1 HSPs)
scaffold0306 (19-201)||(13883-14065)
[»] scaffold0152 (2 HSPs)
scaffold0152 (19-201)||(21262-21444)
scaffold0152 (130-201)||(28463-28535)
[»] scaffold0543 (2 HSPs)
scaffold0543 (19-201)||(10561-10753)
scaffold0543 (19-69)||(10519-10569)
[»] scaffold0922 (1 HSPs)
scaffold0922 (19-155)||(4201-4337)
[»] scaffold0110 (1 HSPs)
scaffold0110 (19-198)||(39634-39823)
[»] scaffold1504 (1 HSPs)
scaffold1504 (19-201)||(864-1056)
[»] scaffold0400 (2 HSPs)
scaffold0400 (19-161)||(15097-15239)
scaffold0400 (19-71)||(15229-15281)
[»] scaffold0365 (2 HSPs)
scaffold0365 (19-161)||(15740-15882)
scaffold0365 (19-71)||(15872-15924)
[»] scaffold0037 (1 HSPs)
scaffold0037 (19-201)||(100212-100404)
[»] scaffold0054 (2 HSPs)
scaffold0054 (90-198)||(36924-37042)
scaffold0054 (19-63)||(37027-37071)
[»] scaffold0042 (1 HSPs)
scaffold0042 (19-201)||(58090-58282)
[»] scaffold0347 (1 HSPs)
scaffold0347 (126-201)||(14878-14953)
[»] scaffold0113 (1 HSPs)
scaffold0113 (19-161)||(38959-39101)
[»] scaffold0004 (1 HSPs)
scaffold0004 (19-161)||(102094-102238)
[»] scaffold0276 (2 HSPs)
scaffold0276 (19-161)||(603-745)
scaffold0276 (19-71)||(735-787)
[»] scaffold0151 (1 HSPs)
scaffold0151 (43-161)||(38669-38786)
[»] scaffold0007 (1 HSPs)
scaffold0007 (98-160)||(199905-199967)
[»] scaffold0010 (3 HSPs)
scaffold0010 (19-76)||(233738-233795)
scaffold0010 (19-76)||(234586-234643)
scaffold0010 (19-76)||(222570-222627)
[»] scaffold0839 (1 HSPs)
scaffold0839 (125-198)||(3709-3792)
[»] scaffold0202 (1 HSPs)
scaffold0202 (38-74)||(16546-16582)
[»] scaffold0016 (1 HSPs)
scaffold0016 (38-74)||(81784-81820)


Alignment Details
Target: chr2 (Bit Score: 142; Significance: 2e-74; HSPs: 51)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 19 - 201
Target Start/End: Complemental strand, 28740491 - 28740309
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||       |||||||||||||||||||||||||||||    
T  28740491 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatt 28740392  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtggtgtaattttaacaagaaaaagtctttcatgaaaagatgag 201  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  28740391 tcgaaggattgtttaataaattggattttgatggattttgtggtgtaattttaacaagaaaaagtctttcataaaaagatgag 28740309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 19 - 188
Target Start/End: Original strand, 7026606 - 7026775
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||       |||||||||||||||||||||||||||||    
T  7026606 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatt 7026705  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtggtgtaattttaacaagaaaaagtctttc 188  Q
    | ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  7026706 tcgaaggattgtttaataaattggattttgatggattttgtagtgtaattttaacaagaaaaagtctttc 7026775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 19 - 201
Target Start/End: Original strand, 3463673 - 3463856
Alignment:
Q  19 caatcaaga-ctctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaat 117  Q
    ||||||||| |||||||||||||||||||||||||||||| ||||||||||| ||||||| ||||       ||||||||||||| |||||||||||| |    
T  3463673 caatcaagaactctttgtcattttaaaaaagtcttgaggtgttcaatcaagacttttcatcatttaaaaaaagtcttgtggtatttaaaatcattcaatt 3463772  T
Q  118 tttgaaggattgtttaataaattggattttgatggattttgtggtgtaattttaacaagaaaaagtctttcatgaaaagatgag 201  Q
    ||  |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||    
T  3463773 ttcaaaggattgtttaataaattggattttgatggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaatatgag 3463856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 19 - 201
Target Start/End: Complemental strand, 13833630 - 13833448
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||| ||| ||||||||||||||||||||  ||||||||||||| ||||||| | ||       ||||| |||||||||||||||||||||||    
T  13833630 caatcaagactttttatcattttaaaaaagtcttgatatattcaatcaagacttttcatcacttaaaaaaagtcttctggtattcaaaatcattcaaatt 13833531  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtggtgtaattttaacaagaaaaagtctttcatgaaaagatgag 201  Q
    ||||||||||||||||||||||||||||||  ||||||||| |||||||||||||||||||||||||||||||| ||||||||    
T  13833530 ttgaaggattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgacaagatgag 13833448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 19 - 201
Target Start/End: Original strand, 18177269 - 18177461
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||       || ||||||||||||||||||||||||||    
T  18177269 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagttttgtggtattcaaaatcattcaaatt 18177368  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcatgaaaagatgag 201  Q
    | ||||||||||||||| ||||||||||||||||||||||||          ||||||||||||||||||||||||||| || ||||||||||    
T  18177369 tcgaaggattgtttaattaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttaataaaaagatgag 18177461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 19 - 201
Target Start/End: Original strand, 28844557 - 28844749
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||       |||||||||||||||||||||||||||||    
T  28844557 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatt 28844656  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcatgaaaagatgag 201  Q
    | |||||||||||||||||||| |||||||||||||||||||          |||||||||||| ||||||||||||||||| ||||||||||    
T  28844657 tcgaaggattgtttaataaattagattttgatggattttgtggaattttgtagtgtaattttaataagaaaaagtctttcataaaaagatgag 28844749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 19 - 195
Target Start/End: Original strand, 33135625 - 33135811
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||       |||| ||||||||||||||||||||||||    
T  33135625 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtctcgtggtattcaaaatcattcaaatt 33135724  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcatgaaaa 195  Q
    | ||||||||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||||| ||||    
T  33135725 tcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcataaaaa 33135811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 19 - 190
Target Start/End: Original strand, 26788786 - 26788969
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnn--gtcttgtggtattcaaaatcattcaaa 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||          |||||||||||||||||||||||||||    
T  26788786 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcattcaaaaaaaaagtcttgtggtattcaaaatcattcaaa 26788885  T
Q  117 ttttgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcat 190  Q
    ||||||||||||||||||||||||||||||||||||||||||||          ||||||||||||||||||||||||||||||    
T  26788886 ttttgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcat 26788969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 19 - 201
Target Start/End: Original strand, 25288161 - 25288353
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||| | ||        ||||||||||||||||||||||||||||    
T  25288161 caatcaagactctttgtcattttaaaaaagtcttgaggtattcattcaagacttttcatcacttaaaaaaaatcttgtggtattcaaaatcattcaaatt 25288260  T
Q  119 ttgaaggattgtttaataaattggattttgat----------ggattttgtggtgtaattttaacaagaaaaagtctttcatgaaaagatgag 201  Q
    | ||||||||||||||||||||||||||||||          ||||||||| ||||||||||||||||| || ||||||||||||||||||||    
T  25288261 tcgaaggattgtttaataaattggattttgatgaattttgtgggattttgtagtgtaattttaacaagagaacgtctttcatgaaaagatgag 25288353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 19 - 200
Target Start/End: Original strand, 10657408 - 10657599
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    |||||||||  |||||||||||||||||||| ||||||||||||||||||| ||||||| | ||       |||||||||||||||||||||||||||||    
T  10657408 caatcaagatcctttgtcattttaaaaaagttttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatt 10657507  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcatgaaaagatga 200  Q
    | ||| ||||||||||||||||||||||||||||||||||||          ||||||||||||||||||||||| ||||||||||||||||    
T  10657508 tcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagatga 10657599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 20 - 201
Target Start/End: Complemental strand, 6224755 - 6224583
Alignment:
Q  20 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcatta-tttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||       ||||||||||||||||||| |||||||||    
T  6224755 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcatcactttaaaaaaagtcttgtggtattcaaaattattcaaatt 6224656  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtggtgtaattttaacaagaaaaagtctttcatgaaaagatgag 201  Q
    | |||||||| ||||||||||          |||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  6224655 tcgaaggattatttaataaat----------tggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgag 6224583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 96 - 201
Target Start/End: Original strand, 379016 - 379121
Alignment:
Q  96 tggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttgatggattttgtggtgtaattttaacaagaaaaagtctttcatgaaaa 195  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| || ||||||||||    
T  379016 tggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttgatagattttgtagtgtaattttaacaagaaaaaatcgttcatgaaaa 379115  T
Q  196 gatgag 201  Q
    ||||||    
T  379116 gatgag 379121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 19 - 148
Target Start/End: Original strand, 3574849 - 3574978
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    |||||||||||  |||||||||||||||||||||||||||||||||||||| ||||||| | ||       |||||||| ||||||||||||||||||||    
T  3574849 caatcaagactaattgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtgatattcaaaatcattcaaatt 3574948  T
Q  119 ttgaaggattgtttaataaattggattttg 148  Q
    | ||||||||||||||||||||||||||||    
T  3574949 tcgaaggattgtttaataaattggattttg 3574978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 19 - 195
Target Start/End: Complemental strand, 10125500 - 10125322
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtctt--gaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaa 116  Q
    ||||||||||||||||||||||||||||||||||  ||| ||||||||||| | ||||||| | ||       ||||  || ||||||||||||||||||    
T  10125500 caatcaagactctttgtcattttaaaaaagtcttttgagatattcaatcaaaacttttcatcacttaaaaaaagtctcatgatattcaaaatcattcaaa 10125401  T
Q  117 ttttgaaggattgtttaataaattggattttgatggattttgtggtgtaattttaacaagaaaaagtctttcatgaaaa 195  Q
    |||  |||||||||||||||||||| ||||||  ||||||| | ||| |||||||||||||||||||||||||| ||||    
T  10125400 tttcaaaggattgtttaataaattgaattttgtgggattttttagtgaaattttaacaagaaaaagtctttcataaaaa 10125322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 19 - 161
Target Start/End: Original strand, 12407382 - 12407524
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| |||||||||||| |||||||||||| ||||||||||| ||| | || || | ||       |||| ||||||||||||||||||||||||    
T  12407382 caatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcgagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatt 12407481  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtgg 161  Q
    |||||||||||||||||||||  ||||||||||||||||||||    
T  12407482 ttgaaggattgtttaataaatcagattttgatggattttgtgg 12407524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 19 - 161
Target Start/End: Original strand, 16269693 - 16269835
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| |||||||||||| |||||||||||| ||||||||||||||| | || || | ||       |||| ||||||||||||||||||||||||    
T  16269693 caatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatt 16269792  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtgg 161  Q
    | |||||||||||||||||||  ||||||||||||||||||||    
T  16269793 tcgaaggattgtttaataaatcagattttgatggattttgtgg 16269835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 19 - 161
Target Start/End: Original strand, 24776357 - 24776499
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| |||||||||||| |||||||||||| ||||||||||||||| | || || | ||       |||| ||||||||||||||||||||||||    
T  24776357 caatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatt 24776456  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtgg 161  Q
    | |||||||||||||||||||  ||||||||||||||||||||    
T  24776457 tcgaaggattgtttaataaatcagattttgatggattttgtgg 24776499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 19 - 161
Target Start/End: Complemental strand, 5093255 - 5093113
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| |||||||||||| |||||||||||| |||||||||||||||   || || | ||       |||| || |||||||||||||||||||||    
T  5093255 caatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagacgcttaatcacttaaaaaaagtctagtagtattcaaaatcattcaaatt 5093156  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtgg 161  Q
    |||||||||||||||||||||  ||||||||||||||||||||    
T  5093155 ttgaaggattgtttaataaatcagattttgatggattttgtgg 5093113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 19 - 161
Target Start/End: Original strand, 20605238 - 20605380
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| |||||||||||| |||||||||||| ||||||||||||||| | || || | ||       |||| |||||||||||||||||| |||||    
T  20605238 caatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattaaaatt 20605337  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtgg 161  Q
    | |||||||||||||||||||  ||||||||||||||||||||    
T  20605338 tcgaaggattgtttaataaatcagattttgatggattttgtgg 20605380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 19 - 161
Target Start/End: Complemental strand, 31170832 - 31170690
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| |||||||||||| |||||||||||| ||||||||||||||| | || || | ||       |||| ||||||||||||||||||||||||    
T  31170832 caatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatt 31170733  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtgg 161  Q
    |  ||||||||||||||||||  ||||||||||||||||||||    
T  31170732 tccaaggattgtttaataaatcagattttgatggattttgtgg 31170690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 19 - 201
Target Start/End: Complemental strand, 215433 - 215254
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||| ||| ||||||||||||||||||||||||||| ||||||| | ||       |||| |||||||||||||||||||||| |    
T  215433 caatcaagactctttgtcaattttaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtctcgtggtattcaaaatcattcaaact 215334  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtggtgtaattttaacaagaaaaagtctttcatgaaaagatgag 201  Q
    |  ||||||||||| ||   ||  | |    |||||||||| ||||||||||||| |||||||||||||||||||||||||||    
T  215333 tcaaaggattgtttgattgttt--aataaattggattttgtagtgtaattttaac-agaaaaagtctttcatgaaaagatgag 215254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 19 - 161
Target Start/End: Complemental strand, 14198785 - 14198643
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||| | |||||||||||| |||||||||||| ||||||||||||||| | || || | ||       |||  ||||||||||||||||||||||||    
T  14198785 caatcaaaattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtccagtggtattcaaaatcattcaaatt 14198686  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtgg 161  Q
    | |||||||||||||||||||  ||||||||||||||||||||    
T  14198685 tcgaaggattgtttaataaatcagattttgatggattttgtgg 14198643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 19 - 161
Target Start/End: Complemental strand, 22551971 - 22551829
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| |||||||||||| |||||||||||| ||||||||||||||| |||| || | ||       |||| |||||||||||||| |||||||||    
T  22551971 caatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagacttttaatcacttaaaaaaagtctagtggtattcaaaattattcaaatt 22551872  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtgg 161  Q
    | ||| ||||||||| ||||||  |||||||||||||||||||    
T  22551871 tcgaatgattgtttattaaattaaattttgatggattttgtgg 22551829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 19 - 161
Target Start/End: Original strand, 35317064 - 35317206
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| |||||||||||| ||||||||||||   ||||||||||||| | || || | ||       |||| ||||||||||||||||||||||||    
T  35317064 caatcaagattctttgtcatttaaaaaaagtcttgtaatattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatt 35317163  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtgg 161  Q
    | |||||||||||||||||||  ||||||||||||||||||||    
T  35317164 tcgaaggattgtttaataaatcagattttgatggattttgtgg 35317206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 19 - 161
Target Start/End: Original strand, 43847648 - 43847790
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| |||||||||||| |||||||||||| ||||||||||||||| | || || | ||       |||| || |||||||||||||||||||||    
T  43847648 caatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagttgtattcaaaatcattcaaatt 43847747  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtgg 161  Q
    | |||||||||||||||||||  || |||||||||||||||||    
T  43847748 tcgaaggattgtttaataaatcagaatttgatggattttgtgg 43847790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 19 - 161
Target Start/End: Original strand, 44765777 - 44765919
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| |||||||||||| |||||||||||| ||||||||||| ||| | || || | ||       |||| ||||||||||||||||||||||||    
T  44765777 caatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcgagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatt 44765876  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtgg 161  Q
    | ||| |||||||||||||||  ||||||||||||||||||||    
T  44765877 tcgaaagattgtttaataaataagattttgatggattttgtgg 44765919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 19 - 160
Target Start/End: Complemental strand, 305673 - 305532
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| | |||||||||| |||||||||||| ||||||||||||||| | || || | ||       |||| ||||||||||||||||||||||||    
T  305673 caatcaagattatttgtcatttgaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatt 305574  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtg 160  Q
    ||||| |||||||||||||||  ||||| |||||||||||||    
T  305573 ttgaatgattgtttaataaatcagatttcgatggattttgtg 305532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 19 - 161
Target Start/End: Original strand, 1789444 - 1789586
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| |||||||||||| |||||||||||  | ||||||||||| | | || || | ||       |||| ||||||||||||||||||||||||    
T  1789444 caatcaagattctttgtcatttaaaaaaagtcttatgatattcaatcaaaactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatt 1789543  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtgg 161  Q
    | |||||||||||||||||||  ||||||||||||||||||||    
T  1789544 tcgaaggattgtttaataaatcagattttgatggattttgtgg 1789586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 19 - 161
Target Start/End: Original strand, 9120128 - 9120270
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    |||||||||||||||   ||||||||||||||||| | ||||||||||||||| || || | ||        ||| ||| |||||||||||||||| |||    
T  9120128 caatcaagactctttccaattttaaaaaagtcttgtgttattcaatcaagattcttaatcacttaaaaaaaatctagtgatattcaaaatcattcagatt 9120227  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtgg 161  Q
    || ||||||||||||||||||| ||||||||||||||||||||    
T  9120228 ttaaaggattgtttaataaattagattttgatggattttgtgg 9120270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 95 - 161
Target Start/End: Original strand, 32125331 - 32125397
Alignment:
Q  95 gtggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttgatggattttgtgg 161  Q
    ||||||||||||||||||||||||| |||||||||||||||||||  ||||||||||||||||||||    
T  32125331 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgg 32125397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 90 - 146
Target Start/End: Complemental strand, 21370687 - 21370631
Alignment:
Q  90 gtcttgtggtattcaaaatcattcaaattttgaaggattgtttaataaattggattt 146  Q
    ||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||    
T  21370687 gtcttgtggtattcaaaatcattcaaattttgaagtattgtttgataaattggattt 21370631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 107 - 198
Target Start/End: Original strand, 43078653 - 43078754
Alignment:
Q  107 atcattcaaattttgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcatgaaaag 196  Q
    ||||||||||||| ||| ||||||||||||||||||||||| ||||||||||||          |||||||||||||| ||||||||||||||| |||||    
T  43078653 atcattcaaatttcgaatgattgtttaataaattggattttcatggattttgtgggattttatagtgtaattttaacatgaaaaagtctttcataaaaag 43078752  T
Q  197 at 198  Q
    ||    
T  43078753 at 43078754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 20 - 174
Target Start/End: Complemental strand, 26601407 - 26601253
Alignment:
Q  20 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 119  Q
    ||||||||||||||||||||  ||||||||||||  |||||||||||||| | || || | ||       |||  |||||||||||||||||||||||||    
T  26601407 aatcaagactctttgtcattaaaaaaaagtcttgtagtattcaatcaagactcttaatcacttaaaaaaagtcacgtggtattcaaaatcattcaaattt 26601308  T
Q  120 tgaaggattgtttaataaattggattttgatggattttgtggtgtaattttaaca 174  Q
     ||| | |||||||||||||  |||||||  ||||||| | ||| || |||||||    
T  26601307 cgaatgtttgtttaataaatcagattttgtgggattttctagtgaaactttaaca 26601253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 19 - 69
Target Start/End: Original strand, 20605154 - 20605204
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 69  Q
    ||||||||| |||||||||||| |||||||||||| |||||||||||||||    
T  20605154 caatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaaga 20605204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 74
Target Start/End: Original strand, 24193595 - 24193631
Alignment:
Q  38 ttttaaaaaagtcttgaggtattcaatcaagattttt 74  Q
    |||||||||||||||| ||||||||||||||||||||    
T  24193595 ttttaaaaaagtcttggggtattcaatcaagattttt 24193631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 24776315 - 24776367
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    ||||||||||||||| | |||| |||||||||||| | |||||||||||||||    
T  24776315 caatcaagactctttctaatttaaaaaaagtcttgtgttattcaatcaagatt 24776367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 69
Target Start/End: Original strand, 7026564 - 7026614
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 69  Q
    ||||||||||| ||||  |||| |||||||||||| |||||||||||||||    
T  7026564 caatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaaga 7026614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 94 - 148
Target Start/End: Original strand, 8172213 - 8172267
Alignment:
Q  94 tgtggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttg 148  Q
    |||||||||| ||| |||||  |||||||||||||  ||||||||||||||||||    
T  8172213 tgtggtattcgaaaacattctgattttgaaggatttcttaataaattggattttg 8172267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 69
Target Start/End: Complemental strand, 10125542 - 10125492
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 69  Q
    ||||||||||||||||  |||| |||||||| ||| |||||||||||||||    
T  10125542 caatcaagactctttgcaatttaaaaaaagttttgtggtattcaatcaaga 10125492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 69
Target Start/End: Original strand, 26788744 - 26788794
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 69  Q
    ||||||||||| ||||  |||| |||||||||||| |||||||||||||||    
T  26788744 caatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaaga 26788794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 69
Target Start/End: Original strand, 32125252 - 32125302
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 69  Q
    ||||||| | |||||||||||| ||||||||| || |||||||||||||||    
T  32125252 caatcaaaattctttgtcatttaaaaaaagtcatgtggtattcaatcaaga 32125302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 5093297 - 5093245
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    |||||||||||||||   |||| |||||||||||| | |||||||||||||||    
T  5093297 caatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagatt 5093245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 38 - 74
Target Start/End: Original strand, 11534881 - 11534917
Alignment:
Q  38 ttttaaaaaagtcttgaggtattcaatcaagattttt 74  Q
    ||||||||||||||| |||||||||||||||| ||||    
T  11534881 ttttaaaaaagtctttaggtattcaatcaagactttt 11534917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 12407340 - 12407392
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    ||||||||| |||||   ||||||||||||||||| | |||||||||||||||    
T  12407340 caatcaagattcttttcaattttaaaaaagtcttgtgttattcaatcaagatt 12407392  T

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Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 16269651 - 16269703
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    |||||||||||||||   |||| |||||||||||| | |||||||||||||||    
T  16269651 caatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagatt 16269703  T

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Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 20605112 - 20605164
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    |||||||||||||||   |||| |||||||||||| | |||||||||||||||    
T  20605112 caatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagatt 20605164  T

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Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 20605196 - 20605248
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    |||||||||||||||   |||| |||||||||||| | |||||||||||||||    
T  20605196 caatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagatt 20605248  T

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Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 38 - 74
Target Start/End: Original strand, 29940991 - 29941027
Alignment:
Q  38 ttttaaaaaagtcttgaggtattcaatcaagattttt 74  Q
    ||||| |||||||||| ||||||||||||||||||||    
T  29940991 ttttataaaagtcttgtggtattcaatcaagattttt 29941027  T

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Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 31170874 - 31170822
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    |||||||||||||||   |||| |||||||||||| | |||||||||||||||    
T  31170874 caatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagatt 31170822  T

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Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 38 - 74
Target Start/End: Complemental strand, 34028971 - 34028935
Alignment:
Q  38 ttttaaaaaagtcttgaggtattcaatcaagattttt 74  Q
    ||||||||||||||| |||||||||||||||| ||||    
T  34028971 ttttaaaaaagtctttaggtattcaatcaagactttt 34028935  T

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Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 38 - 74
Target Start/End: Original strand, 45546977 - 45547013
Alignment:
Q  38 ttttaaaaaagtcttgaggtattcaatcaagattttt 74  Q
    ||||| |||||||||| ||||||||||||||||||||    
T  45546977 ttttataaaagtcttgtggtattcaatcaagattttt 45547013  T

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Target: chr5 (Bit Score: 138; Significance: 4e-72; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 19 - 201
Target Start/End: Complemental strand, 4240657 - 4240475
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||       |||||||||||||||||||||||||||||    
T  4240657 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatt 4240558  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtggtgtaattttaacaagaaaaagtctttcatgaaaagatgag 201  Q
    | ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||    
T  4240557 tcgaaggattgtttaataaattggattttgatggattttgtagtgtaattttaacaagaaaaagtctttcatgaatagatgag 4240475  T

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Target: chr5; HSP #2
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 19 - 201
Target Start/End: Original strand, 5949110 - 5949291
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| | ||        ||||||||||||||||||||||||||||    
T  5949110 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaaatttttcatcacttaaaaaaa-tcttgtggtattcaaaatcattcaaatt 5949208  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtggtgtaattttaacaagaaaaagtctttcatgaaaagatgag 201  Q
    | ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  5949209 tcgaaggattgtttaataaattggattttgatggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgag 5949291  T

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Target: chr5; HSP #3
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 19 - 201
Target Start/End: Complemental strand, 40013907 - 40013725
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||        ||||||| ||||||||||||||||||||    
T  40013907 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaaatcttgtgttattcaaaatcattcaaatt 40013808  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtggtgtaattttaacaagaaaaagtctttcatgaaaagatgag 201  Q
    | ||||||||||||||| ||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  40013807 tcgaaggattgtttaatcaattggattttaatggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgag 40013725  T

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Target: chr5; HSP #4
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 19 - 201
Target Start/End: Complemental strand, 14000310 - 14000118
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||| ||||       |||||||||||||||||||||||||||||    
T  14000310 caatcaagactctttgtcatttttaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatt 14000211  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcatgaaaagatgag 201  Q
    ||||||||||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||||||||||||||||    
T  14000210 ttgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgag 14000118  T

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Target: chr5; HSP #5
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 19 - 200
Target Start/End: Original strand, 13925932 - 13926123
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||       |||||||||||||||||||||||||||||    
T  13925932 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattacttaaaaaaagtcttgtggtattcaaaatcattcaaatt 13926031  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcatgaaaagatga 200  Q
    | ||||||||||||||||||||||||||||||||||||||||          ||||||||||||||||||||||||||||| ||||||||||    
T  13926032 tcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcaagaaaagatga 13926123  T

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Target: chr5; HSP #6
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 19 - 201
Target Start/End: Complemental strand, 1461343 - 1461161
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||| | ||       |||||| | ||||||||||||||||||||    
T  1461343 caatcaagactctttgtaattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgcgctattcaaaatcattcaaatt 1461244  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtggtgtaattttaacaagaaaaagtctttcatgaaaagatgag 201  Q
    | |||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||| |||||||||||||||||||    
T  1461243 tcgaaggattgtttaataaattggattttgatggattttgtactgtaattttaacaagaaaaaatctttcatgaaaagatgag 1461161  T

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Target: chr5; HSP #7
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 19 - 198
Target Start/End: Original strand, 22746298 - 22746479
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||| | ||||||| | ||       |||||||| ||||||||||||||||||||    
T  22746298 caatcaaaactctttgtcattttaaaaaagtcttgaggtattcaatcaaaacttttcatcacttaaaaaaagtcttgtgatattcaaaatcattcaaatt 22746397  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtgg--tgtaattttaacaagaaaaagtctttcatgaaaagat 198  Q
    | ||| ||||||||||||||||| |||||||||||||||||||  |||||||||||||||||||| ||||||||||||||||    
T  22746398 tcgaatgattgtttaataaattgaattttgatggattttgtgggatgtaattttaacaagaaaaactctttcatgaaaagat 22746479  T

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Target: chr5; HSP #8
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 19 - 201
Target Start/End: Complemental strand, 1152308 - 1152116
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| || | ||       |||||||||||||||||||||||||||||    
T  1152308 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactttttatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatt 1152209  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcatgaaaagatgag 201  Q
    | || |||||||||||||||||||||||||||||||||||||          ||||||||||||||||||||||||||| |||||||||||||    
T  1152208 tcgagggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtcttttatgaaaagatgag 1152116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 19 - 201
Target Start/End: Complemental strand, 4550462 - 4550270
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||| |||| |||||||||||||||||||| ||||||| | ||       |||||||||||||||||||||||||||||    
T  4550462 caatcaagactctttgtcattttaacaaaggcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatt 4550363  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcatgaaaagatgag 201  Q
    | ||||||||||||||||||||||||||||||||||||||||          ||||||||||||||||||| |||||||||||||||||||||    
T  4550362 tcgaaggattgtttaataaattggattttgatggattttgtggaattttgtagtgtaattttaacaagaaagagtctttcatgaaaagatgag 4550270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 19 - 197
Target Start/End: Complemental strand, 7947778 - 7947590
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||       |||||| | ||||||||||||||||||||    
T  7947778 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgcgatattcaaaatcattcaaatt 7947679  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcatgaaaaga 197  Q
    | ||||||||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||||||||||||    
T  7947678 tcgaaggattgtttaataaattggattttgatggattttgtggaattttgtagtgtaattttaacaagaaaaagtctttcatgaaaaga 7947590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 19 - 201
Target Start/End: Original strand, 37013915 - 37014087
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||| | ||       |||||| ||||||||||||||||||||||    
T  37013915 caatcaagactctttgtcatttttaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgcggtattcaaaatcattcaaatt 37014014  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtggtgtaattttaacaagaaaaagtctttcatgaaaagatgag 201  Q
    | ||||| |||||||||||||          |||||||||| || ||||||||||||||||||||||||||| ||||||||||    
T  37014015 tcgaagggttgtttaataaat----------tggattttgtagtataattttaacaagaaaaagtctttcataaaaagatgag 37014087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 45 - 201
Target Start/End: Original strand, 39852372 - 39852538
Alignment:
Q  45 aaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaattttgaaggattgtttaataaattggat 144  Q
    ||||||||||||||||||||||||| || |||| ||||       |||||||||||||||||||||||||||||| ||||||||||||| ||||||||||    
T  39852372 aaagtcttgaggtattcaatcaagacttctcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttactaaattggat 39852471  T
Q  145 tttgat----------ggattttgtggtgtaattttaacaagaaaaagtctttcatgaaaagatgag 201  Q
    ||||||          ||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  39852472 tttgatggattttatgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgag 39852538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 19 - 161
Target Start/End: Original strand, 21147068 - 21147210
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| |||||||||||| |||||||||||| ||||||||||||||| | || || | ||       |||| ||||||||||||||||||||||||    
T  21147068 caatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatt 21147167  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtgg 161  Q
    | |||||||||||||||||||  ||||||||||||||||||||    
T  21147168 tcgaaggattgtttaataaatcagattttgatggattttgtgg 21147210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 19 - 161
Target Start/End: Complemental strand, 5273124 - 5272982
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| |||||||||||| |||||||||||  ||||||||||||||| | || || ||||       |||| ||||||||||||||||||||||||    
T  5273124 caatcaagattctttgtcatttaaaaaaagtcttatggtattcaatcaagactcttaatcatttaaaaaaagtctagtggtattcaaaatcattcaaatt 5273025  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtgg 161  Q
    | ||| |||||||||||||||  ||||||||||||||||||||    
T  5273024 tcgaatgattgtttaataaatcagattttgatggattttgtgg 5272982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 19 - 161
Target Start/End: Complemental strand, 14465432 - 14465290
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    |||||||||||||||||||||| |||||||| ||  ||||||||||||||| | |||||   ||       |||||||||||||||||||||||||||||    
T  14465432 caatcaagactctttgtcatttaaaaaaagttttctggtattcaatcaagactcttcatcgcttaaaaaaagtcttgtggtattcaaaatcattcaaatt 14465333  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtgg 161  Q
    | ||| ||||||||||||||| ||||||||||| |||||||||    
T  14465332 tcgaaagattgtttaataaatcggattttgatgaattttgtgg 14465290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 19 - 159
Target Start/End: Original strand, 139274 - 139414
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| |||||||||||| ||||||||| || ||||||||||||||| |||| || | ||       |||| ||||||||||||||||||||||||    
T  139274 caatcaagattctttgtcatttaaaaaaagtcatgtggtattcaatcaagacttttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatt 139373  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgt 159  Q
    | ||||||||||||||||||   ||||||||||||||||||    
T  139374 tcgaaggattgtttaataaaccagattttgatggattttgt 139414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 19 - 161
Target Start/End: Complemental strand, 27459154 - 27459013
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    |||| |||| |||||||||||| ||||||||||||  |||||||||||||| | || || | ||       |||| |||||||||||||||||||| |||    
T  27459154 caattaagattctttgtcatttaaaaaaagtcttgtagtattcaatcaagactcttaatcacttaaaaaa-gtctagtggtattcaaaatcattcagatt 27459056  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtgg 161  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  27459055 ttgaaggattgtttaataaattagattttgatggattttgtgg 27459013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 19 - 161
Target Start/End: Complemental strand, 7016944 - 7016802
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    |||||||||||||||   |||| ||||||||||||  |||||||||||||| | || || | ||       |||| ||||||||||||||||||||||||    
T  7016944 caatcaagactcttttcaatttaaaaaaagtcttgtagtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatt 7016845  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtgg 161  Q
    | |||||||||||||||||||  ||||||||||||||||||||    
T  7016844 tcgaaggattgtttaataaatcagattttgatggattttgtgg 7016802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 19 - 158
Target Start/End: Original strand, 6460793 - 6460932
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| |||||||||||| ||||||||| ||  |||||||||||||| | || || ||||        ||| ||||||||||||||||||||||||    
T  6460793 caatcaagattctttgtcatttaaaaaaagtcatgtcgtattcaatcaagactcttaatcatttaaaaaaaatctagtggtattcaaaatcattcaaatt 6460892  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttg 158  Q
    | ||||| |||||||||||||  |||||||||||||||||    
T  6460893 tcgaaggtttgtttaataaatcagattttgatggattttg 6460932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 19 - 161
Target Start/End: Complemental strand, 32158103 - 32157960
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnn-gtcttgtggtattcaaaatcattcaaat 117  Q
    ||||||||| |||||||||||| |||||||||||| |||||||||||||||    | || | ||        |||| |||||||||||||||||||||||    
T  32158103 caatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagacccctaatcacttaaaaaaaagtctagtggtattcaaaatcattcaaat 32158004  T
Q  118 tttgaaggattgtttaataaattggattttgatggattttgtgg 161  Q
    || |||||||||||||||||||| |||||||| |||||||||||    
T  32158003 ttcgaaggattgtttaataaattagattttgacggattttgtgg 32157960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 31 - 161
Target Start/End: Complemental strand, 33656234 - 33656104
Alignment:
Q  31 tttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaattttgaaggattgt 130  Q
    |||||||||| |||||||||||| ||||||||||||||| | || || | ||        |||  |||||||||||||||||||||||| ||||||||||    
T  33656234 tttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaatctaatggtattcaaaatcattcaaatttcgaaggattgt 33656135  T
Q  131 ttaataaattggattttgatggattttgtgg 161  Q
    |||||||||  ||||||||||||||||||||    
T  33656134 ttaataaatcagattttgatggattttgtgg 33656104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 19 - 200
Target Start/End: Complemental strand, 9220912 - 9220731
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||| ||||||||||||||  ||||||||||| | ||||||||||||| | || || | ||       ||||| || ||||||||||||||||||||    
T  9220912 caatcaaaactctttgtcatttagaaaaagtcttgtgatattcaatcaagactctttatcacttaaaaaaagtcttatgatattcaaaatcattcaaatt 9220813  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtggtgtaattttaacaagaaaaagtctttcatgaaaagatga 200  Q
    |  |||||||||||||| |||| || ||||  ||||||| | ||  |||||||||| ||||||||||||| |||||| ||||    
T  9220812 tctaaggattgtttaatgaattagaatttgtaggattttatagtaaaattttaacacgaaaaagtctttcgtgaaaacatga 9220731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 96 - 161
Target Start/End: Original strand, 849225 - 849290
Alignment:
Q  96 tggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttgatggattttgtgg 161  Q
    |||||||||||||||||||||||| |||||||||||||||||||  ||||||||| ||||||||||    
T  849225 tggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgg 849290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 90 - 160
Target Start/End: Original strand, 9689730 - 9689799
Alignment:
Q  90 gtcttgtggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttgatggattttgtg 160  Q
    ||||||||||||| ||||||||| |||||| ||| |||||||| ||||||| |||||||||||||| ||||    
T  9689730 gtcttgtggtatttaaaatcatt-aaatttcgaatgattgtttgataaattagattttgatggattgtgtg 9689799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 5273166 - 5273114
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    ||||||||| | |||||||||| |||||||||||| | |||||||||||||||    
T  5273166 caatcaagattttttgtcatttaaaaaaagtcttgtgctattcaatcaagatt 5273114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 74
Target Start/End: Original strand, 17518474 - 17518510
Alignment:
Q  38 ttttaaaaaagtcttgaggtattcaatcaagattttt 74  Q
    |||||||||||||||| ||||||||||||||||||||    
T  17518474 ttttaaaaaagtcttgtggtattcaatcaagattttt 17518510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 69
Target Start/End: Complemental strand, 40013949 - 40013899
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 69  Q
    ||||||||||| ||||  |||| |||||||||||| |||||||||||||||    
T  40013949 caatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaaga 40013899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 74
Target Start/End: Complemental strand, 9689371 - 9689338
Alignment:
Q  41 taaaaaagtcttgaggtattcaatcaagattttt 74  Q
    ||||||| ||||||||||||||||||||||||||    
T  9689371 taaaaaaatcttgaggtattcaatcaagattttt 9689338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 74
Target Start/End: Complemental strand, 28594477 - 28594444
Alignment:
Q  41 taaaaaagtcttgaggtattcaatcaagattttt 74  Q
    ||||||||||||| ||||||||||||||||||||    
T  28594477 taaaaaagtcttgtggtattcaatcaagattttt 28594444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 21147026 - 21147078
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    |||||||||||||||   |||| |||||||||||| | |||||||||||||||    
T  21147026 caatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagatt 21147078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 33656290 - 33656238
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    |||||||||||||||   |||| |||||||||||| | |||||||||||||||    
T  33656290 caatcaagactcttttcaatttaaaaaaagtcttgtgttattcaatcaagatt 33656238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 38 - 74
Target Start/End: Original strand, 40410636 - 40410672
Alignment:
Q  38 ttttaaaaaagtcttgaggtattcaatcaagattttt 74  Q
    ||||| |||||||||| ||||||||||||||||||||    
T  40410636 ttttataaaagtcttgtggtattcaatcaagattttt 40410672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 138; Significance: 4e-72; HSPs: 88)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 19 - 201
Target Start/End: Complemental strand, 10728847 - 10728665
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||       ||||||||||||| |||||||||||||||    
T  10728847 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttacaaaaagtcttgtggtatttaaaatcattcaaatt 10728748  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtggtgtaattttaacaagaaaaagtctttcatgaaaagatgag 201  Q
    | ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  10728747 tggaaggattgtttaataaattggattttgatggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgag 10728665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 19 - 201
Target Start/End: Original strand, 39038040 - 39038222
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||       |||||||||||| ||||||||||||||||    
T  39038040 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcactttaaaaaagtcttgtggtatccaaaatcattcaaatt 39038139  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtggtgtaattttaacaagaaaaagtctttcatgaaaagatgag 201  Q
    | |||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||    
T  39038140 tcgaagaattgtttaataaattggattttgatggattttgtagtgtaattttaacaagaaaaagtctttcataaaaagatgag 39038222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 19 - 201
Target Start/End: Complemental strand, 36674336 - 36674144
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||       |||||||||||||||||||||||||||||    
T  36674336 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatt 36674237  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcatgaaaagatgag 201  Q
    ||||||||||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||||||||||||||||    
T  36674236 ttgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgag 36674144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 19 - 201
Target Start/End: Complemental strand, 50762256 - 50762074
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||| || ||||||| ||||       |||||||||||||||||||||||| ||||    
T  50762256 caatcaagactctttgtcattttaaaaaagtcttgagatattcaatcatgacttttcataatttaaaaaaagtcttgtggtattcaaaatcattctaatt 50762157  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtggtgtaattttaacaagaaaaagtctttcatgaaaagatgag 201  Q
    | ||| |||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  50762156 tcgaatgattgtttgataaattggattttgatggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgag 50762074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 19 - 201
Target Start/End: Original strand, 37454861 - 37455043
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| ||||||||||||||||||||||||||| ||||||||||||| ||||||| ||||       |||||||||||||||||||||||||||||    
T  37454861 caatcaagattctttgtcattttaaaaaagtcttgagatattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatt 37454960  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtggtgtaattttaacaagaaaaagtctttcatgaaaagatgag 201  Q
    | ||| ||||||||||||||||| ||||||  ||||||||| ||||||||||||||||||||||| |||||||||||||||||    
T  37454961 tcgaatgattgtttaataaattgaattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagatgag 37455043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 19 - 201
Target Start/End: Complemental strand, 34484236 - 34484044
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||       || ||||||||||||||||||||||||||    
T  34484236 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagttttgtggtattcaaaatcattcaaatt 34484137  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcatgaaaagatgag 201  Q
    | ||||||||||||||||||||||||||||||||||||||||          ||||||||||||||||||||| |||||||||||||||||||    
T  34484136 tcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaaatctttcatgaaaagatgag 34484044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 19 - 175
Target Start/End: Original strand, 10660535 - 10660691
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||       || ||||||||||||||||||||||||||    
T  10660535 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtattgtggtattcaaaatcattcaaatt 10660634  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtggtgtaattttaacaa 175  Q
    | ||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  10660635 tcgaaggattgtttaataaattggattttgatggattttgtagtgtaattttaacaa 10660691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 22 - 201
Target Start/End: Original strand, 40897147 - 40897336
Alignment:
Q  22 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaattttg 121  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||       ||||| |||||||||||||||||||||||| |    
T  40897147 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttatggtattcaaaatcattcaaatttcg 40897246  T
Q  122 aaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcatgaaaagatgag 201  Q
    |||||||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||||||||||||||||    
T  40897247 aaggattgtttaataaattggattttgatggattttgtgggattttatagtgtaattttaacaagaaaaagtctttcatgaaaagatgag 40897336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 19 - 201
Target Start/End: Original strand, 11431526 - 11431718
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||       ||||||||||||||||||||||| |||||    
T  11431526 caataaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcatttaaatt 11431625  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcatgaaaagatgag 201  Q
    | |||||||||||||||||||||||||||| |||||||||||          |||||||||||||||||||||||||||||||||||||||||    
T  11431626 tcgaaggattgtttaataaattggattttggtggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgag 11431718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 19 - 201
Target Start/End: Complemental strand, 44906719 - 44906527
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||       |||||||||||||||||||||||||||||    
T  44906719 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatt 44906620  T
Q  119 ttgaaggattgtttaataaattggattttgat----------ggattttgtggtgtaattttaacaagaaaaagtctttcatgaaaagatgag 201  Q
    | ||||||||||||||||||||||||||||||          ||||||||| |||||||||||||||||||| ||||||||||||||||||||    
T  44906619 tcgaaggattgtttaataaattggattttgatgaattttgtgggattttgtagtgtaattttaacaagaaaatgtctttcatgaaaagatgag 44906527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 20 - 198
Target Start/End: Original strand, 20832993 - 20833181
Alignment:
Q  20 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 119  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||       |||||||||||||||||||||||||||||     
T  20832993 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagaattttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaattc 20833092  T
Q  120 tgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcatgaaaagat 198  Q
     ||||||||||||||||||||||||||||||||||||||||          ||||||||||||||||||||||| ||||||||||||||    
T  20833093 ggaaggattgtttaataaattggattttgatggattttgtgagatttattagtgtaattttaacaagaaaaagtatttcatgaaaagat 20833181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 19 - 201
Target Start/End: Original strand, 26107261 - 26107453
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| | ||       |||||||||||||||||||||||||||||    
T  26107261 caatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcaattaaaaaaagtcttgtggtattcaaaatcattcaaatt 26107360  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcatgaaaagatgag 201  Q
    | ||||||||||||||||||||||||||||||||||||||||          ||||||||||||||||||||||| |||||| ||||||||||    
T  26107361 tcgaaggattgtttaataaattggattttgatggattttgtgtgattttgtagtgtaattttaacaagaaaaagtatttcataaaaagatgag 26107453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 19 - 201
Target Start/End: Original strand, 52810378 - 52810570
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||| ||||       |||||||||||||||||||||||||||||    
T  52810378 caatcaagactctttgtcattttaaaaaagttttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatt 52810477  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcatgaaaagatgag 201  Q
    ||||| ||||||||||||||||| ||||||||||||||||||          | ||||||||||||||||||| |||||||||||||||||||    
T  52810478 ttgaatgattgtttaataaattgaattttgatggattttgtgggattttgtagcgtaattttaacaagaaaaaatctttcatgaaaagatgag 52810570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 21 - 201
Target Start/End: Original strand, 32580179 - 32580368
Alignment:
Q  21 atcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatttt 120  Q
    |||||| ||||||||||||||||||||||||||||||||||||| |||| ||||||| ||||       ||||||||||||||||||||||||||||||     
T  32580179 atcaaggctctttgtcattttaaaaaagtcttgaggtattcaat-aagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttc 32580277  T
Q  121 gaaggattgtttaataaattggattttgat----------ggattttgtggtgtaattttaacaagaaaaagtctttcatgaaaagatgag 201  Q
    ||||||||||||||||||||||||||||||          ||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  32580278 gaaggattgtttaataaattggattttgatggattttgagggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgag 32580368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 19 - 161
Target Start/End: Complemental strand, 52618171 - 52618029
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||       |||||||||||||||||||||||||||||    
T  52618171 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatt 52618072  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtgg 161  Q
    | |||||||||||||||||||||||||||||||||||||||||    
T  52618071 tcgaaggattgtttaataaattggattttgatggattttgtgg 52618029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 19 - 201
Target Start/End: Original strand, 17946288 - 17946480
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| | ||       |||| ||| ||||||||||||||||||||    
T  17946288 caatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtctcgtgatattcaaaatcattcaaatt 17946387  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcatgaaaagatgag 201  Q
    |  |||||||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||||||||||||||||    
T  17946388 tcaaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgag 17946480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 19 - 198
Target Start/End: Complemental strand, 51737933 - 51737743
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaa-gtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaat 117  Q
    ||||||||||||||| ||||||||||||| |||||||||||||||||||||| ||||||| | ||       ||||||||||||||||||||||||||||    
T  51737933 caatcaagactctttatcattttaaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaat 51737834  T
Q  118 tttgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcatgaaaagat 198  Q
    || ||||||||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||||| |||||||    
T  51737833 ttcgaaggattgtttaataaattggattttgatggattttgtgggattttgttgtgtaattttaacaagaaaaagtctttcataaaaagat 51737743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 19 - 198
Target Start/End: Original strand, 48379157 - 48379346
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||| | ||       |||||||||||||||||||||||||||||    
T  48379157 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatctagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatt 48379256  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcatgaaaagat 198  Q
    | ||||||||||||||||||||| ||||||||||||||||||          |||||||||||| ||||||| |||||||||||||||||    
T  48379257 tcgaaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaataagaaaatgtctttcatgaaaagat 48379346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 19 - 194
Target Start/End: Complemental strand, 23753592 - 23753427
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| ||||       |||||||||||||||||||||||||||||    
T  23753592 caatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatt 23753493  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtggtgtaattttaacaagaaaaagtctttcatgaaa 194  Q
    | ||||||||||||||||||||||||          ||||| ||||||||||||||||||||||||||||||||||    
T  23753492 tcgaaggattgtttaataaattggat----------tttgtagtgtaattttaacaagaaaaagtctttcatgaaa 23753427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 19 - 195
Target Start/End: Complemental strand, 31646490 - 31646304
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||| |||||||||||||||||| |||||||||||||| ||||||| ||||        ||||||||||||||||||||||||||||    
T  31646490 caatcaagactctttgttattttaaaaaagtcttgacgtattcaatcaagacttttcatcatttaaaaaaaatcttgtggtattcaaaatcattcaaatt 31646391  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcatgaaaa 195  Q
    | ||| ||||||||||| ||||||||||||||||||||||||          |||||||||||||||||||||||||||||||||||    
T  31646390 tcgaaagattgtttaatgaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaa 31646304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 19 - 201
Target Start/End: Original strand, 54628843 - 54629036
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnng-tcttgtggtattcaaaatcattcaaat 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |            |||||||||||||||||||||||||||    
T  54628843 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacaaaaaaaaaaatcttgtggtattcaaaatcattcaaat 54628942  T
Q  118 tttgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcatgaaaagatgag 201  Q
    ||  |||||||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||||| ||||||||||    
T  54628943 ttcaaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcataaaaagatgag 54629036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 39 - 201
Target Start/End: Original strand, 18749632 - 18749804
Alignment:
Q  39 tttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaattttgaaggattgtttaataaa 138  Q
    |||||||||||||||||||||||||| || | ||||||| | ||       |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  18749632 tttaaaaaagtcttgaggtattcaataaaaacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaa 18749731  T
Q  139 ttggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcatgaaaagatgag 201  Q
    ||||||||||||||||||||||          |||||||||||||||||||||||||||||||||||||||||    
T  18749732 ttggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgag 18749804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 19 - 201
Target Start/End: Complemental strand, 50903449 - 50903254
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnn---gtcttgtggtattcaaaatcattcaa 115  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||| |||| || ||||          ||||||||||||||||||||||||||    
T  50903449 caatcaagactctttgtcattttaaaaaagtcttaaggtattcaatcaagactttttatcatttaaaaaaaaaagtcttgtggtattcaaaatcattcaa 50903350  T
Q  116 attttgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcatgaaaagatgag 201  Q
    |||  ||||||||||||||||||||||||||||||||||||||||          ||||||||||||||||||||| ||||| ||||||| |||||    
T  50903349 attaagaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaaatcttttatgaaaatatgag 50903254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 27 - 193
Target Start/End: Original strand, 44276397 - 44276559
Alignment:
Q  27 actctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaattttgaagga 126  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| | ||       ||||  |||||||||||||||||||||||    ||||    
T  44276397 actctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcatcacttaaaaaaagtctcatggtattcaaaatcattcaaatt----agga 44276492  T
Q  127 ttgtttaataaattggattttgatggattttgtggtgtaattttaacaagaaaaagtctttcatgaa 193  Q
    ||||||||||||||||||||||  ||||||| | ||| ||||||||||||||||| |||||||||||    
T  44276493 ttgtttaataaattggattttgtgggattttctagtgaaattttaacaagaaaaaatctttcatgaa 44276559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 19 - 161
Target Start/End: Complemental strand, 6035259 - 6035117
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| | ||       |||| ||| ||||||||||||||||||||    
T  6035259 caatcaagagtctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcatcacttaaaaaaagtctcgtgatattcaaaatcattcaaatt 6035160  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtgg 161  Q
    | |||| | ||||||||||||| ||||||||||||||||||||    
T  6035159 tcgaagcaatgtttaataaattagattttgatggattttgtgg 6035117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 90 - 201
Target Start/End: Complemental strand, 39842619 - 39842508
Alignment:
Q  90 gtcttgtggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttgatggattttgtggtgtaattttaacaagaaaaagtctttca 189  Q
    |||| ||| ||||||||||||||||||||| |||| ||||||||||||||| |||||||| |||||||||  ||||||||||||||||||||||||||||    
T  39842619 gtctcgtgatattcaaaatcattcaaatttcgaagaattgtttaataaattagattttgacggattttgtaatgtaattttaacaagaaaaagtctttca 39842520  T
Q  190 tgaaaagatgag 201  Q
    ||||||||||||    
T  39842519 tgaaaagatgag 39842508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 43 - 153
Target Start/End: Complemental strand, 539586 - 539476
Alignment:
Q  43 aaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaattttgaaggattgtttaataaattgg 142  Q
    ||||||||||||||||||||||||||||||||||| ||||       |||||||||||||||||||||||||||||| |||||||| |||||||||||||    
T  539586 aaaaagtcttgaggtattcaatcaagatttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattatttaataaattgg 539487  T
Q  143 attttgatgga 153  Q
    |||||||||||    
T  539486 attttgatgga 539476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 19 - 161
Target Start/End: Original strand, 29030006 - 29030147
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    |||| ||||||||||||||||| |||||||||||| ||||||||||||||| | || || | ||       |||||||||||||||||||||||||||||    
T  29030006 caattaagactctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaa-gtcttgtggtattcaaaatcattcaaatt 29030104  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtgg 161  Q
    |||||||||||||||||||||  ||||||||||||||||||||    
T  29030105 ttgaaggattgtttaataaatcagattttgatggattttgtgg 29030147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 19 - 161
Target Start/End: Complemental strand, 996292 - 996150
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| ||||| |||||| |||||||||||| ||||||||||||||||| || || | ||       |||| ||||||||||||||||||||||||    
T  996292 caatcaagattctttatcatttcaaaaaagtcttgtggtattcaatcaagattcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatt 996193  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtgg 161  Q
    | |||||||||||||||||||  ||||||||||||||||||||    
T  996192 tcgaaggattgtttaataaatcagattttgatggattttgtgg 996150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 19 - 161
Target Start/End: Original strand, 19253827 - 19253969
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| |||||||||||| |||||||||||| ||||||||||||||| | || || | ||       |||| ||||||||||||||||||||||||    
T  19253827 caatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatt 19253926  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtgg 161  Q
    | |||||||||||||||||||  ||||||||||||||||||||    
T  19253927 tcgaaggattgtttaataaataagattttgatggattttgtgg 19253969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 19 - 161
Target Start/End: Original strand, 20498209 - 20498351
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| |||||||||||| |||||||||||| ||||||||||||||| | || || | ||       |||| ||||||||||||||||||||||||    
T  20498209 caatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatt 20498308  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtgg 161  Q
    | |||||||||||||||||||  ||||||||||||||||||||    
T  20498309 tcgaaggattgtttaataaatcagattttgatggattttgtgg 20498351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 19 - 161
Target Start/End: Complemental strand, 37820683 - 37820541
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| |||||||||||| |||||| ||||| ||||||||||||||||| || || | ||       |||| ||||||||||||||||||||||||    
T  37820683 caatcaagattctttgtcatttaaaaaaattcttgtggtattcaatcaagattcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatt 37820584  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtgg 161  Q
    | |||||||||||||||||||  ||||||||||||||||||||    
T  37820583 tcgaaggattgtttaataaatcagattttgatggattttgtgg 37820541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 19 - 195
Target Start/End: Original strand, 6975749 - 6975922
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||| |||||||||| |||||||||||||||||||||| ||||||| ||||       |||||||||||||||||||||||||||||    
T  6975749 caatcaagactctttgttattttaaaaa-gtcttgaggtattcaatcaagacttttcatcatttaaaaa--gtcttgtggtattcaaaatcattcaaatt 6975845  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtggtgtaattttaacaagaaaaagtctttcatgaaaa 195  Q
    | |||| ||| |||| ||||||||| ||||  ||||||| | ||  ||||| | || |||| |||||||||||||||    
T  6975846 tcgaagaattatttactaaattggaatttgtgggattttctagtaaaatttgagcatgaaacagtctttcatgaaaa 6975922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 19 - 161
Target Start/End: Complemental strand, 3999851 - 3999709
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| |||||||||||| |||||||||||| ||||||||||||||| | || || | ||        ||| ||||||||||||||||||||||||    
T  3999851 caatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaatctagtggtattcaaaatcattcaaatt 3999752  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtgg 161  Q
    | |||||||||||||||||||  ||||||||||||||||||||    
T  3999751 tcgaaggattgtttaataaatcagattttgatggattttgtgg 3999709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 19 - 161
Target Start/End: Original strand, 40246844 - 40246986
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| |||||||||||| |||||||| ||| ||||||||||||||| | || || | ||       |||| ||||||||||||||||||||||||    
T  40246844 caatcaagattctttgtcatttaaaaaaagttttgtggtattcaatcaagactattaatcagttaaaaaaagtctagtggtattcaaaatcattcaaatt 40246943  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtgg 161  Q
    | |||||||||||||||||||  ||||||||||||||||||||    
T  40246944 tggaaggattgtttaataaatcagattttgatggattttgtgg 40246986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 24 - 193
Target Start/End: Complemental strand, 15493061 - 15492889
Alignment:
Q  24 aagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaattt---- 119  Q
    |||||||||||||||||||||||||||||||||||||||||||| | ||||||| | ||       ||||  ||||||||||||||||||||||||        
T  15493061 aagactctttgtcattttaaaaaagtcttgaggtattcaatcaaaacttttcatcactt-aaaaatgtctcatggtattcaaaatcattcaaatttttaa 15492963  T
Q  120 tgaaggattgtttaataaattggattttgatggattttgtggtgtaattttaacaagaaaaagtctttcatgaa 193  Q
    | ||| ||| |||||||||||||||||||  |||| || | ||| ||||||||||||||||| |||||||||||    
T  15492962 ttaagaattatttaataaattggattttgtaggatattctagtgaaattttaacaagaaaaaatctttcatgaa 15492889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 19 - 161
Target Start/End: Complemental strand, 10139352 - 10139210
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| || || |||||| |||||||||||| ||||||||||||||| | || || | ||       |||| ||||||||||||||||||||||||    
T  10139352 caatcaagattccttatcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatt 10139253  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtgg 161  Q
    | |||||||||||||||||||  ||||||||||||||||||||    
T  10139252 tcgaaggattgtttaataaatcagattttgatggattttgtgg 10139210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 19 - 161
Target Start/End: Original strand, 25418366 - 25418508
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| |||||||||||| |||||||||||| ||||||||||||||| |||| || | ||        ||| | ||||||||||||||||||||||    
T  25418366 caatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagacttttaatcacttacaaaaaatctagcggtattcaaaatcattcaaatt 25418465  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtgg 161  Q
    |  ||||||||||||||||||  ||||||||||||||||||||    
T  25418466 tgaaaggattgtttaataaatcagattttgatggattttgtgg 25418508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 19 - 161
Target Start/End: Original strand, 35337735 - 35337877
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| || |||||||||||||||||||||| ||||||||||||||| | || || | ||       |||| |||||||||||||  |||||||||    
T  35337735 caatcaagattccttgtcattttaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaaaaattcaaatt 35337834  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtgg 161  Q
    | |||||||||||||||||||  ||||||||||||||||||||    
T  35337835 tcgaaggattgtttaataaatcagattttgatggattttgtgg 35337877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 90 - 200
Target Start/End: Original strand, 27899415 - 27899525
Alignment:
Q  90 gtcttgtggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttgatggattttgtggtgtaattttaacaagaaaaagtctttca 189  Q
    |||| ||||||||||||||||||||||||| |||||||||||||||||||  |||||||  ||||||| | ||| ||||||| || ||||||||||||||    
T  27899415 gtctggtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgtaggattttctagtgaaattttagcatgaaaaagtctttca 27899514  T
Q  190 tgaaaagatga 200  Q
    |||||| ||||    
T  27899515 tgaaaacatga 27899525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 19 - 161
Target Start/End: Complemental strand, 33808005 - 33807862
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnn-gtcttgtggtattcaaaatcattcaaat 117  Q
    |||| |||| |||||||||||| |||||||||||| ||||||||||||||| | || || | ||        |||| |||||||||||||||||||||||    
T  33808005 caattaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaagtctagtggtattcaaaatcattcaaat 33807906  T
Q  118 tttgaaggattgtttaataaattggattttgatggattttgtgg 161  Q
    || |||||||||||||||||||  ||||||||||||||||||||    
T  33807905 ttcgaaggattgtttaataaatcagattttgatggattttgtgg 33807862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 19 - 158
Target Start/End: Complemental strand, 33996747 - 33996608
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| |||||||||||| |||||||||||| ||||||||||||||| | || || | ||        ||  ||||||||||||||||||||||||    
T  33996747 caatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaatccagtggtattcaaaatcattcaaatt 33996648  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttg 158  Q
    | |||||||||||||||||||  |||||||||||||||||    
T  33996647 tcgaaggattgtttaataaatcagattttgatggattttg 33996608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 96 - 161
Target Start/End: Original strand, 5825139 - 5825204
Alignment:
Q  96 tggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttgatggattttgtgg 161  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  5825139 tggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttgatagattttgtgg 5825204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 19 - 161
Target Start/End: Original strand, 6589564 - 6589706
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||| | || ||||||||| |||||||||||| ||||||||||||||| | || || ||||       |||| ||||||||||||||||||||||||    
T  6589564 caatcaatattccttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcatttaaaaaaagtctagtggtattcaaaatcattcaaatt 6589663  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtgg 161  Q
    | |||| ||| ||||||||||  ||||||||||||||||||||    
T  6589664 tcgaagaattatttaataaatcagattttgatggattttgtgg 6589706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 43 - 201
Target Start/End: Complemental strand, 3206387 - 3206219
Alignment:
Q  43 aaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaattttgaaggattgtttaataaattgg 142  Q
    ||||||||||| ||||||||||||||| | || || | ||       |||| ||||||||||||||||||||||||| |||||||||||||||||||  |    
T  3206387 aaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcag 3206288  T
Q  143 attttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcatgaaaagatgag 201  Q
    ||||||||||||||||||          ||| ||||||| ||||||||||||||||||||||| |||||    
T  3206287 attttgatggattttgtgggattttctagtgaaattttagcaagaaaaagtctttcatgaaaacatgag 3206219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 19 - 159
Target Start/End: Complemental strand, 53929334 - 53929194
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| |||||||||||| |||||||||||| ||||||||||||||| | || || | ||       |||| |||||||||||||||||| ||||     
T  53929334 caatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcatttaaata 53929235  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgt 159  Q
    | ||| |||||||||||||||  ||||||||||||||||||    
T  53929234 tcgaacgattgtttaataaataagattttgatggattttgt 53929194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 19 - 122
Target Start/End: Original strand, 12103629 - 12103732
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    |||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||| | ||       ||||  |||||||||||||||||||||||    
T  12103629 caattaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcatcacttaaaaaaagtctcatggtattcaaaatcattcaaatt 12103728  T
Q  119 ttga 122  Q
    ||||    
T  12103729 ttga 12103732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 19 - 161
Target Start/End: Complemental strand, 29449064 - 29448922
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| || |||||||||  ||||||||||| | ||||||||||||| | |  || | ||       |||| ||||||||||||||||||||||||    
T  29449064 caatcaagattccttgtcatttacaaaaagtcttgtgatattcaatcaagactctcaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatt 29448965  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtgg 161  Q
    | |||||||||||||||||||  ||||||||||||||||||||    
T  29448964 tcgaaggattgtttaataaatcagattttgatggattttgtgg 29448922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 19 - 157
Target Start/End: Complemental strand, 1440159 - 1440020
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaa-gtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaat 117  Q
    ||||||||| |||||||||||| |||||| || ||| ||||||||||||||| | || || | ||       |||| |||||||||||||||||||||||    
T  1440159 caatcaagattctttgtcatttaaaaaaaagttttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaat 1440060  T
Q  118 tttgaaggattgtttaataaattggattttgatggatttt 157  Q
    ||  ||||||||||||||||||  ||||||||||||||||    
T  1440059 ttccaaggattgtttaataaatcagattttgatggatttt 1440020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 23 - 161
Target Start/End: Original strand, 52114532 - 52114671
Alignment:
Q  23 caagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnn-gtcttgtggtattcaaaatcattcaaattttg 121  Q
    ||||| |||||||||||| |||||||||||| ||||||||||||||| |||| || | ||        |||| |||||||||||||| |||||||||| |    
T  52114532 caagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagacttttaatcacttaaaaaaaagtctagtggtattcaaaataattcaaatttcg 52114631  T
Q  122 aaggattgtttaataaattggattttgatggattttgtgg 161  Q
     |||||||||||||||||  ||||||||| ||||||||||    
T  52114632 caggattgtttaataaatcagattttgatagattttgtgg 52114671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 19 - 161
Target Start/End: Complemental strand, 44762243 - 44762101
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| |||||||||||| ||||||||| ||  |||||||||||||| | || || | ||       |||| |||||||| ||||| |||||| ||    
T  44762243 caatcaagattctttgtcatttaaaaaaagtcatgtagtattcaatcaagactcttaatcacttaaaaaaagtctagtggtatttaaaattattcaagtt 44762144  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtgg 161  Q
    | |||||||||||||||||||  ||||||||||||||||||||    
T  44762143 tcgaaggattgtttaataaatcagattttgatggattttgtgg 44762101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 19 - 161
Target Start/End: Complemental strand, 51699685 - 51699544
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| |||||||||||| |||||| ||||| ||||||||||||||| | || || | ||        ||| ||||||||||||||||||||||||    
T  51699685 caatcaagattctttgtcatttaaaaaaaatcttgtggtattcaatcaagactcttaatcacttaaaaaaa-tctagtggtattcaaaatcattcaaatt 51699587  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtgg 161  Q
    | ||||||||| |||||||||  |||||||||| |||||||||    
T  51699586 tcgaaggattggttaataaataagattttgatgaattttgtgg 51699544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 19 - 161
Target Start/End: Original strand, 54625592 - 54625734
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||| | || ||||||||| |||||| |||||  |||||||||||||| | || || | ||       |||| |||||||||||||| |||||||||    
T  54625592 caatcaatattcgttgtcatttaaaaaaaatcttgttgtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaattattcaaatt 54625691  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtgg 161  Q
    | |||||||||||||||||||  ||||||||||||||||||||    
T  54625692 tcgaaggattgtttaataaatcagattttgatggattttgtgg 54625734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 19 - 77
Target Start/End: Original strand, 18749570 - 18749628
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcat 77  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||    
T  18749570 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaaacttttcat 18749628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 148 - 201
Target Start/End: Original strand, 45862980 - 45863033
Alignment:
Q  148 gatggattttgtggtgtaattttaacaagaaaaagtctttcatgaaaagatgag 201  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  45862980 gatggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgag 45863033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 95 - 183
Target Start/End: Original strand, 52080003 - 52080091
Alignment:
Q  95 gtggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttgatggattttgtggtgtaattttaacaagaaaaagt 183  Q
    |||||||||||||||||||||||||||||||||||||||||||||  |||||||  ||||||| |  || ||||||| || ||||||||    
T  52080003 gtggtattcaaaatcattcaaattttgaaggattgtttaataaatcagattttgtgggattttctaatgaaattttagcatgaaaaagt 52080091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 32 - 157
Target Start/End: Original strand, 55235198 - 55235322
Alignment:
Q  32 ttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaattttgaaggattgtt 131  Q
    |||||||||||||||||||  ||||||||||||||| | | ||||| | ||       ||||  || ||||||||||||||||||||| ||| |||||||    
T  55235198 ttgtcattttaaaaaagtcacgaggtattcaatcaaaactcttcatcaattaaaaaa-gtctcatgatattcaaaatcattcaaatttcgaaagattgtt 55235296  T
Q  132 taataaattggattttgatggatttt 157  Q
    ||||||||||| ||||||||||||||    
T  55235297 taataaattggtttttgatggatttt 55235322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 95 - 161
Target Start/End: Original strand, 22057838 - 22057904
Alignment:
Q  95 gtggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttgatggattttgtgg 161  Q
    |||||||| |||||||||||||||| || ||||||||||||||||  ||||||||||||||||||||    
T  22057838 gtggtatttaaaatcattcaaatttcgatggattgtttaataaatcagattttgatggattttgtgg 22057904  T

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Target: chr3; HSP #59
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 90 - 146
Target Start/End: Complemental strand, 23535946 - 23535890
Alignment:
Q  90 gtcttgtggtattcaaaatcattcaaattttgaaggattgtttaataaattggattt 146  Q
    |||||||||||||||||||||||||||||| ||||||| ||||||| |||| |||||    
T  23535946 gtcttgtggtattcaaaatcattcaaatttagaaggatcgtttaattaattagattt 23535890  T

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Target: chr3; HSP #60
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 60
Target Start/End: Complemental strand, 27240449 - 27240408
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtatt 60  Q
    ||||||||||||||||||||||||||||||| ||||||||||    
T  27240449 caatcaagactctttgtcattttaaaaaagttttgaggtatt 27240408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 114 - 161
Target Start/End: Complemental strand, 1440005 - 1439958
Alignment:
Q  114 aaattttgaaggattgtttaataaattggattttgatggattttgtgg 161  Q
    |||||| |||||||||||||||||||| ||||||||| ||||||||||    
T  1440005 aaatttggaaggattgtttaataaattagattttgatagattttgtgg 1439958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 69
Target Start/End: Complemental strand, 6131377 - 6131327
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 69  Q
    |||||||||||| ||||||||| |||||||| ||| |||||||||||||||    
T  6131377 caatcaagactcattgtcatttaaaaaaagttttgtggtattcaatcaaga 6131327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 3206444 - 3206392
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    |||||||||||||||   |||| |||||||||||| |||||||||||||||||    
T  3206444 caatcaagactcttttcaatttaaaaaaagtcttgtggtattcaatcaagatt 3206392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 23753634 - 23753582
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    ||||||||||| ||||  |||| |||||||||||| |||||||||||||||||    
T  23753634 caatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaagatt 23753582  T

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Target: chr3; HSP #65
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 63
Target Start/End: Original strand, 27899386 - 27899430
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaa 63  Q
    |||||||||||||||||||||| |||||||||| | |||||||||    
T  27899386 caatcaagactctttgtcatttaaaaaaagtctggtggtattcaa 27899430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 71
Target Start/End: Complemental strand, 3999895 - 3999841
Alignment:
Q  17 cacaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    ||||||||||||| ||| | |||| |||||||||||| | |||||||||||||||    
T  3999895 cacaatcaagactttttctaatttaaaaaaagtcttgtgttattcaatcaagatt 3999841  T

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Target: chr3; HSP #67
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 69
Target Start/End: Original strand, 10660493 - 10660543
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 69  Q
    ||||||||||| ||||  |||| |||||||||||| |||||||||||||||    
T  10660493 caatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaaga 10660543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 69
Target Start/End: Complemental strand, 36674378 - 36674328
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 69  Q
    ||||||||||| ||||  |||| |||||||||||| |||||||||||||||    
T  36674378 caatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaaga 36674328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 201
Target Start/End: Complemental strand, 6131308 - 6131247
Alignment:
Q  140 tggattttgatggattttgtggtgtaattttaacaagaaaaagtctttcatgaaaagatgag 201  Q
    |||||||||  ||||||| | ||| ||||||| || |||||||||||||||||||| |||||    
T  6131308 tggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgag 6131247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 69
Target Start/End: Original strand, 6975712 - 6975757
Alignment:
Q  24 aagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 69  Q
    |||||||||||| | || |||||||||||| |||||||||||||||    
T  6975712 aagactctttgtaacttaaaaaaagtcttgtggtattcaatcaaga 6975757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 74
Target Start/End: Complemental strand, 19552187 - 19552150
Alignment:
Q  37 attttaaaaaagtcttgaggtattcaatcaagattttt 74  Q
    |||||| |||||||||| ||||||||||||||||||||    
T  19552187 attttataaaagtcttgtggtattcaatcaagattttt 19552150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 44276347 - 44276392
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaat 64  Q
    |||| |||||||||||| |||| |||||||||||| ||||||||||    
T  44276347 caattaagactctttgtaatttaaaaaaagtcttgtggtattcaat 44276392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 1440200 - 1440149
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    ||||||||||| ||| ||| ||||||||||||||| | |||||||||||||||    
T  1440200 caatcaagactattt-tcaatttaaaaaagtcttgtgttattcaatcaagatt 1440149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 10139394 - 10139342
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    |||||||||||||||   |||| |||||||||||| | |||||||||||||||    
T  10139394 caatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagatt 10139342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 19253785 - 19253837
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    |||||||||||||||   |||| |||||||||||| | |||||||||||||||    
T  19253785 caatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagatt 19253837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 38 - 74
Target Start/End: Original strand, 26555860 - 26555896
Alignment:
Q  38 ttttaaaaaagtcttgaggtattcaatcaagattttt 74  Q
    ||||| |||||||||| ||||||||||||||||||||    
T  26555860 ttttataaaagtcttgtggtattcaatcaagattttt 26555896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 38 - 74
Target Start/End: Original strand, 27593198 - 27593234
Alignment:
Q  38 ttttaaaaaagtcttgaggtattcaatcaagattttt 74  Q
    ||||||||||||||| |||||||||||||||| ||||    
T  27593198 ttttaaaaaagtctttaggtattcaatcaagactttt 27593234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 38 - 74
Target Start/End: Original strand, 30588885 - 30588921
Alignment:
Q  38 ttttaaaaaagtcttgaggtattcaatcaagattttt 74  Q
    ||||| |||||||||| ||||||||||||||||||||    
T  30588885 ttttataaaagtcttgtggtattcaatcaagattttt 30588921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 35337693 - 35337745
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    |||||||||||||||   |||| |||||||||||| | |||||||||||||||    
T  35337693 caatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagatt 35337745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 38 - 74
Target Start/End: Complemental strand, 36055045 - 36055009
Alignment:
Q  38 ttttaaaaaagtcttgaggtattcaatcaagattttt 74  Q
    ||||| |||||||||| ||||||||||||||||||||    
T  36055045 ttttataaaagtcttgtggtattcaatcaagattttt 36055009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 38 - 74
Target Start/End: Original strand, 36786017 - 36786053
Alignment:
Q  38 ttttaaaaaagtcttgaggtattcaatcaagattttt 74  Q
    ||||||||||||||| |||||||||||||||| ||||    
T  36786017 ttttaaaaaagtctttaggtattcaatcaagactttt 36786053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 37820725 - 37820673
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    |||||||||||||||   |||| |||||||||||| | |||||||||||||||    
T  37820725 caatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagatt 37820673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 38 - 74
Target Start/End: Complemental strand, 38629838 - 38629802
Alignment:
Q  38 ttttaaaaaagtcttgaggtattcaatcaagattttt 74  Q
    ||||| |||||||||| ||||||||||||||||||||    
T  38629838 ttttataaaagtcttgtggtattcaatcaagattttt 38629802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 38 - 74
Target Start/End: Original strand, 38682472 - 38682508
Alignment:
Q  38 ttttaaaaaagtcttgaggtattcaatcaagattttt 74  Q
    |||||||||| ||||| ||||||||||||||||||||    
T  38682472 ttttaaaaaaatcttgtggtattcaatcaagattttt 38682508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 44762285 - 44762233
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    |||||||||||||||   |||| |||||||||||| | |||||||||||||||    
T  44762285 caatcaagactcttttcaatttaaaaaaagtcttgtgttattcaatcaagatt 44762233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 38 - 74
Target Start/End: Complemental strand, 50900485 - 50900449
Alignment:
Q  38 ttttaaaaaagtcttgaggtattcaatcaagattttt 74  Q
    ||||| |||||||||| ||||||||||||||||||||    
T  50900485 ttttataaaagtcttgtggtattcaatcaagattttt 50900449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 42 - 74
Target Start/End: Complemental strand, 52024233 - 52024201
Alignment:
Q  42 aaaaaagtcttgaggtattcaatcaagattttt 74  Q
    |||||||||||| ||||||||||||||||||||    
T  52024233 aaaaaagtcttgtggtattcaatcaagattttt 52024201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 38 - 74
Target Start/End: Complemental strand, 53184111 - 53184075
Alignment:
Q  38 ttttaaaaaagtcttgaggtattcaatcaagattttt 74  Q
    |||||||||||||| | ||||||||||||||||||||    
T  53184111 ttttaaaaaagtctcgtggtattcaatcaagattttt 53184075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 134; Significance: 1e-69; HSPs: 58)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 19 - 201
Target Start/End: Complemental strand, 18306166 - 18305984
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||       |||||||||||||||||||||||||||||    
T  18306166 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatt 18306067  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtggtgtaattttaacaagaaaaagtctttcatgaaaagatgag 201  Q
    | ||| ||||||||||||||||||||||||  ||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  18306066 tcgaaagattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgag 18305984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 19 - 201
Target Start/End: Original strand, 7466336 - 7466518
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||   ||       |||||||||||||||||||||||||||||    
T  7466336 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttaaaaaaagtcttgtggtattcaaaatcattcaaatt 7466435  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtggtgtaattttaacaagaaaaagtctttcatgaaaagatgag 201  Q
    |||||| |||||||||||||||||||||||  ||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  7466436 ttgaagaattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgag 7466518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 19 - 201
Target Start/End: Original strand, 16362197 - 16362379
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||       |||| ||||||||||||||||||||||||    
T  16362197 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcattacttaaaaaaagtctcgtggtattcaaaatcattcaaatt 16362296  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtggtgtaattttaacaagaaaaagtctttcatgaaaagatgag 201  Q
    | ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||| || ||||||||||    
T  16362297 tcgaaggattgtttaataaattggattttgatggattttgtagtgtaattttaacaagaaaaaatcttttataaaaagatgag 16362379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 19 - 201
Target Start/End: Complemental strand, 14782340 - 14782148
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||       |||||||||||||||||||||||||||||    
T  14782340 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatt 14782241  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcatgaaaagatgag 201  Q
    ||||||||||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||||||||||||||||    
T  14782240 ttgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgag 14782148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 19 - 201
Target Start/End: Complemental strand, 44726015 - 44725823
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||       |||||||||||||||||||||||||||||    
T  44726015 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatt 44725916  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcatgaaaagatgag 201  Q
    ||||||||||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||||||||||||||||    
T  44725915 ttgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgag 44725823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 19 - 201
Target Start/End: Original strand, 32497526 - 32497708
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||       |||||||||||||||||||||||||||||    
T  32497526 caatcaatactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatt 32497625  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtggtgtaattttaacaagaaaaagtctttcatgaaaagatgag 201  Q
    | ||| ||||||||||||||||||||||||  ||||||||| ||||||||||||||||| |||||||||||||||||||||||    
T  32497626 tcgaatgattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagagaaagtctttcatgaaaagatgag 32497708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 19 - 201
Target Start/End: Complemental strand, 42305990 - 42305808
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||        |||||||||||||||||| |||||||||    
T  42305990 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaaatcttgtggtattcaaaataattcaaatt 42305891  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtggtgtaattttaacaagaaaaagtctttcatgaaaagatgag 201  Q
    | ||||||||||||||| ||||||||||| ||||||||||| |||||||||||||||||||||||| |||||||||| |||||    
T  42305890 tcgaaggattgtttaatcaattggattttaatggattttgtagtgtaattttaacaagaaaaagtcattcatgaaaaaatgag 42305808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 19 - 198
Target Start/End: Complemental strand, 18958932 - 18958743
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| ||||       |||||||||||||||||||||||||||||    
T  18958932 caatcaagactctttatcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatt 18958833  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcatgaaaagat 198  Q
    | ||||||||||||||||||||||||||| ||||||||||||          ||||||||||||||||||||||||||||||||||||||    
T  18958832 tcgaaggattgtttaataaattggattttaatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagat 18958743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 19 - 201
Target Start/End: Complemental strand, 9288662 - 9288470
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| | ||       |||||||||||||||||||||||||||||    
T  9288662 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaaaattttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatt 9288563  T
Q  119 ttgaaggattgtttaataaattggattttgat----------ggattttgtggtgtaattttaacaagaaaaagtctttcatgaaaagatgag 201  Q
    | ||||||||||||||||||||||||||||||          ||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  9288562 tcgaaggattgtttaataaattggattttgatgaattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgag 9288470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 19 - 201
Target Start/End: Complemental strand, 19718086 - 19717894
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||       |||||||||||||||||||||||||||||    
T  19718086 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatt 19717987  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcatgaaaagatgag 201  Q
    | |||| |||||||||||||||||||||| ||||||||||||          ||||||||||||||||||||||||||| |||||||||||||    
T  19717986 tcgaagaattgtttaataaattggattttaatggattttgtgggattttgtagtgtaattttaacaagaaaaagtcttttatgaaaagatgag 19717894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 19 - 201
Target Start/End: Complemental strand, 39467673 - 39467481
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||       |||||||||||||||||||||||||||||    
T  39467673 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatt 39467574  T
Q  119 ttgaaggattgtttaataaattggattttgatgga----------ttttgtggtgtaattttaacaagaaaaagtctttcatgaaaagatgag 201  Q
    | ||||||||||||||||||||| |||||||||||          |||||| ||||||||||||||||||||| |||||||||||||||||||    
T  39467573 tcgaaggattgtttaataaattgaattttgatggattttatgggattttgtagtgtaattttaacaagaaaaaatctttcatgaaaagatgag 39467481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 19 - 201
Target Start/End: Complemental strand, 10295586 - 10295393
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    |||||||||||||| |||| || |||||||||||||||||||||||||||| ||||||| | ||       |||||||||||||||||||||||||||||    
T  10295586 caatcaagactcttcgtcacttaaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatt 10295487  T
Q  119 ttgaaggattgtttaataaattggattttgatgga-----------ttttgtggtgtaattttaacaagaaaaagtctttcatgaaaagatgag 201  Q
    | |||||||||||||||||||||||||||||||||           |||||| |||||||||||||||||||||||||||||||||||||||||    
T  10295486 tcgaaggattgtttaataaattggattttgatggatttttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgag 10295393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 43 - 201
Target Start/End: Original strand, 37857144 - 37857302
Alignment:
Q  43 aaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaattttgaaggattgtttaataaattgg 142  Q
    ||||||| |||||||||||||| |||||||||||| | ||       ||||||||||||||||| ||||||||||||| |||||||||||||||||||||    
T  37857144 aaaaagttttgaggtattcaattaagatttttcatcacttaaaaaaagtcttgtggtattcaaattcattcaaattttaaaggattgtttaataaattgg 37857243  T
Q  143 attttgatggattttgtggtgtaattttaacaagaaaaagtctttcatgaaaagatgag 201  Q
    ||||||||||||||||| ||||||||| ||||||||||| |||||||||||||||||||    
T  37857244 attttgatggattttgtagtgtaatttgaacaagaaaaaatctttcatgaaaagatgag 37857302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 19 - 198
Target Start/End: Complemental strand, 4031463 - 4031294
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| | ||       |||||||||||||||||||||||||||||    
T  4031463 caatcaagaatctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcataaattaaaaaaagtcttgtggtattcaaaatcattcaaatt 4031364  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtggtgtaattttaacaagaaaaagtctttcatgaaaagat 198  Q
    | ||||||||||||||||||||||||          ||||| ||||||||||||||||||||||||||||||||||||||    
T  4031363 tcgaaggattgtttaataaattggat----------tttgtagtgtaattttaacaagaaaaagtctttcatgaaaagat 4031294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 19 - 198
Target Start/End: Original strand, 31623696 - 31623865
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||       |||||||||||||||||||||||||||||    
T  31623696 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatt 31623795  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtggtgtaattttaacaagaaaaagtctttcatgaaaagat 198  Q
    | |||||||||||||||||||          |||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  31623796 tcgaaggattgtttaataaat----------tggattttgtagtgtaattttaacaagaaaaagtttttcatgaaaagat 31623865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 19 - 189
Target Start/End: Original strand, 26856067 - 26856248
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtctt-gaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaat 117  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| | ||       ||||||||||||||||||||||||||||    
T  26856067 caatcaagactctttgtcattttaaaaaagtctttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaat 26856166  T
Q  118 tttgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttca 189  Q
    || |||| |||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||||    
T  26856167 ttcgaagtattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttca 26856248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 19 - 201
Target Start/End: Original strand, 4403108 - 4403300
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    |||||||||||| || ||||||||||||| |||||| ||||||||| |||||||||||| | ||        ||| ||||||||||||||||||||||||    
T  4403108 caatcaagactcattttcattttaaaaaaatcttgaagtattcaattaagatttttcatcacttaaaaaaaatctcgtggtattcaaaatcattcaaatt 4403207  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcatgaaaagatgag 201  Q
    | |||||||||||||||||||||| |||||||||||||||||          ||||||||||||||||||||||||||||||||||| |||||    
T  4403208 tcgaaggattgtttaataaattgggttttgatggattttgtgggattttttagtgtaattttaacaagaaaaagtctttcatgaaaatatgag 4403300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 19 - 201
Target Start/End: Complemental strand, 43166895 - 43166703
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||| ||||  |||| |||||||||||| ||||||||||||||| | ||  | ||||       |||||||||||||||||||||||||||||    
T  43166895 caatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgtggtattcaaaatcattcaaatt 43166796  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcatgaaaagatgag 201  Q
    | ||||||||||||||||||||||||||||||||||||||||          ||||||||||||||||||||||| |||||||||||||||||    
T  43166795 tcgaaggattgtttaataaattggattttgatggattttgtgggattttgttgtgtaattttaacaagaaaaagtttttcatgaaaagatgag 43166703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 19 - 201
Target Start/End: Original strand, 43959659 - 43959840
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| ||||||||||||||||||||||||| | ||||||||||||||| || || | ||       | || ||||||||||||||||||||||||    
T  43959659 caatcaagattctttgtcattttaaaaaagtcttgtg-tattcaatcaagattcttaatcacttcaaaaaagactagtggtattcaaaatcattcaaatt 43959757  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtggtgtaattttaacaagaaaaagtctttcatgaaaagatgag 201  Q
    | ||| |||||||||||||||  |||||||||||||||||||||| ||||||| || |||||||||||| || |||| |||||    
T  43959758 tcgaatgattgtttaataaatcagattttgatggattttgtggtgaaattttagcatgaaaaagtctttaattaaaacatgag 43959840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 19 - 161
Target Start/End: Complemental strand, 26374635 - 26374493
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| |||||||||||| |||||||||||| ||||||||||||||| | || || | ||       |||| ||||||||||||||||||||||||    
T  26374635 caatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatt 26374536  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtgg 161  Q
    | |||||||||||||||||||  ||||||||||||||||||||    
T  26374535 tcgaaggattgtttaataaataagattttgatggattttgtgg 26374493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 19 - 161
Target Start/End: Complemental strand, 10392442 - 10392300
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| ||||||||||||||||||| ||||| | ||||||||||||| |||| || | ||       |||| |||||||||| |||||||||||||    
T  10392442 caatcaagattctttgtcattttaaaaaattcttgtgatattcaatcaagacttttaatcacttaagaaaagtctagtggtattcagaatcattcaaatt 10392343  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtgg 161  Q
    | |||||||||||||||||||  ||||||||||||||||||||    
T  10392342 tcgaaggattgtttaataaatcagattttgatggattttgtgg 10392300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 19 - 161
Target Start/End: Complemental strand, 24502018 - 24501876
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| ||||| |||||| |||||||||||| ||||||||||||||| | || || | ||       |||| ||||||||||||||||||||||||    
T  24502018 caatcaagattctttatcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatt 24501919  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtgg 161  Q
    | |||||||||||||||||||  ||||||||||||||||||||    
T  24501918 tcgaaggattgtttaataaatcagattttgatggattttgtgg 24501876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 19 - 161
Target Start/End: Complemental strand, 42938322 - 42938180
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| | |||||||||| |||||||||||| ||||||||||||||| | || || | ||       |||| ||||||||||||||||||||||||    
T  42938322 caatcaagattatttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatt 42938223  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtgg 161  Q
    | |||||||||||||||||||  ||||||||||||||||||||    
T  42938222 tcgaaggattgtttaataaatcagattttgatggattttgtgg 42938180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 19 - 161
Target Start/End: Complemental strand, 2705024 - 2704882
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| |||||||||||| |||||||||||| ||||||||||||||| | || || | ||       |||| ||||||||||||||||||||||||    
T  2705024 caatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatt 2704925  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtgg 161  Q
    | ||| |||||||||||||||   |||||||||||||||||||    
T  2704924 tcgaatgattgtttaataaatcaaattttgatggattttgtgg 2704882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 19 - 201
Target Start/End: Original strand, 41479098 - 41479280
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| |||||||||||| |||||||||||| ||||||||||||||| | || || | ||       ||||  |||||||||||||||||||||||    
T  41479098 caatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctaatggtattcaaaatcattcaaatt 41479197  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtggtgtaattttaacaagaaaaagtctttcatgaaaagatgag 201  Q
    | ||| |||||||||||||||  |||||||  ||||||| | ||  ||||||| || |||||| ||||||||||||| |||||    
T  41479198 tcgaatgattgtttaataaatcagattttgtgggattttctagtaaaattttagcatgaaaaaatctttcatgaaaacatgag 41479280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 19 - 161
Target Start/End: Complemental strand, 7507104 - 7506962
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||| ||| || ||||||||| | |||||||||| ||||||||||||||| | || || | ||       |||| ||||||||||||| ||||||||||    
T  7507104 caatcgagattccttgtcatttaagaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaaccattcaaatt 7507005  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtgg 161  Q
    |||||||||||||||||||||  ||||||||||||||||||||    
T  7507004 ttgaaggattgtttaataaatcagattttgatggattttgtgg 7506962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 19 - 161
Target Start/End: Complemental strand, 23115373 - 23115232
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| |||||||||||| ||||| |||||| ||||||||||||||| | || || | ||       |||| |||||||||||| |||||||||||    
T  23115373 caatcaagattctttgtcatttaaaaaatgtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaa-tcattcaaatt 23115275  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtgg 161  Q
    | |||||||||||||||||||  ||||||||||||||||||||    
T  23115274 tggaaggattgtttaataaatcagattttgatggattttgtgg 23115232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 19 - 161
Target Start/End: Original strand, 42937354 - 42937494
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| | |||||||||| |||||||||||| |||||||||||  || | || || | ||       |||| ||||||||||||||||||||||||    
T  42937354 caatcaagattttttgtcatttaaaaaaagtcttgtggtattcaatc--gactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatt 42937451  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtgg 161  Q
    | |||||||||||||||||||  ||||||||||||||||||||    
T  42937452 tcgaaggattgtttaataaatcagattttgatggattttgtgg 42937494  T

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Target: chr8; HSP #29
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 19 - 161
Target Start/End: Complemental strand, 42735482 - 42735340
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| ||||| |||||| ||||||| |||| |||||||||| |||| | || || | ||       |||| ||||||||||||||||||||||||    
T  42735482 caatcaagattctttatcatttaaaaaaagacttgtggtattcaattaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatt 42735383  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtgg 161  Q
    | |||| ||||||||||||||  ||||||||||||||||||||    
T  42735382 tcgaagtattgtttaataaatcagattttgatggattttgtgg 42735340  T

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Target: chr8; HSP #30
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 19 - 148
Target Start/End: Complemental strand, 32711487 - 32711358
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| |||||||||||| |||||||||||| ||||||||||||||| | || || | ||       |||| |||||||||||||||||| |||||    
T  32711487 caatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcatttaaatt 32711388  T
Q  119 ttgaaggattgtttaataaattggattttg 148  Q
    | |||||||||||||||||||  |||||||    
T  32711387 tcgaaggattgtttaataaatcagattttg 32711358  T

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Target: chr8; HSP #31
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 19 - 161
Target Start/End: Complemental strand, 5576826 - 5576683
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnn-gtcttgtggtattcaaaatcattcaaat 117  Q
    ||||||||| |||||||||||| |||||||||||| ||||||||||||||| | || || | ||        |||  |||||||||||||||||||||||    
T  5576826 caatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaagtcaagtggtattcaaaatcattcaaat 5576727  T
Q  118 tttgaaggattgtttaataaattggattttgatggattttgtgg 161  Q
    || |||| |||||||||||||   ||||||||||||||||||||    
T  5576726 ttcgaagaattgtttaataaaccagattttgatggattttgtgg 5576683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 96 - 161
Target Start/End: Complemental strand, 8410526 - 8410461
Alignment:
Q  96 tggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttgatggattttgtgg 161  Q
    ||||||||||||||||| |||||| ||||||||||||| ||||||||| |||||||||||||||||    
T  8410526 tggtattcaaaatcattgaaatttggaaggattgtttactaaattggactttgatggattttgtgg 8410461  T

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Target: chr8; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 19 - 158
Target Start/End: Complemental strand, 39190018 - 39189881
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||  |||| |||||||||||| |||||||||| || | | || || ||||       ||||  || ||||||| ||||||||||||    
T  39190018 caatcaagactctttgcaatttaaaaaaagtcttgtggtattcaataaaaactctttatcatttaaaaaaagtctcatg-tattcaacatcattcaaatt 39189920  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttg 158  Q
    | |||||||||||||||||||| || ||||||||||||||    
T  39189919 tcgaaggattgtttaataaatt-gaatttgatggattttg 39189881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 90 - 159
Target Start/End: Complemental strand, 13478384 - 13478315
Alignment:
Q  90 gtcttgtggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttgatggattttgt 159  Q
    ||||||| |||||||||||| || |||||| |||||||||||||||||||| ||||| | ||||||||||    
T  13478384 gtcttgtagtattcaaaatcttttaaatttcgaaggattgtttaataaattagatttcgttggattttgt 13478315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 90 - 161
Target Start/End: Complemental strand, 4950150 - 4950079
Alignment:
Q  90 gtcttgtggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttgatggattttgtgg 161  Q
    |||||| ||||||||||||||||||| |||  || |||| ||||||||||| |||||||||||| |||||||    
T  4950150 gtcttggggtattcaaaatcattcaagtttcaaaagattatttaataaattagattttgatggaatttgtgg 4950079  T

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Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 69
Target Start/End: Complemental strand, 14782382 - 14782332
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 69  Q
    ||||||||||| ||||  |||| |||||||||||| |||||||||||||||    
T  14782382 caatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaaga 14782332  T

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Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 69
Target Start/End: Complemental strand, 18958974 - 18958924
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 69  Q
    ||||||||||| ||||  |||| |||||||||||| |||||||||||||||    
T  18958974 caatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaaga 18958924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 69
Target Start/End: Complemental strand, 19718128 - 19718078
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 69  Q
    ||||||||||| ||||  |||| |||||||||||| |||||||||||||||    
T  19718128 caatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaaga 19718078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 69
Target Start/End: Complemental strand, 44726057 - 44726007
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 69  Q
    ||||||||||| ||||  |||| |||||||||||| |||||||||||||||    
T  44726057 caatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaaga 44726007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 74
Target Start/End: Original strand, 14061595 - 14061628
Alignment:
Q  41 taaaaaagtcttgaggtattcaatcaagattttt 74  Q
    ||||||||||||| ||||||||||||||||||||    
T  14061595 taaaaaagtcttgtggtattcaatcaagattttt 14061628  T

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Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 38 - 74
Target Start/End: Complemental strand, 1606051 - 1606015
Alignment:
Q  38 ttttaaaaaagtcttgaggtattcaatcaagattttt 74  Q
    ||||| |||||||||| ||||||||||||||||||||    
T  1606051 ttttataaaagtcttgtggtattcaatcaagattttt 1606015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 38 - 74
Target Start/End: Original strand, 2112837 - 2112873
Alignment:
Q  38 ttttaaaaaagtcttgaggtattcaatcaagattttt 74  Q
    ||||| |||||||||| ||||||||||||||||||||    
T  2112837 ttttataaaagtcttgtggtattcaatcaagattttt 2112873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 69
Target Start/End: Complemental strand, 4031503 - 4031455
Alignment:
Q  21 atcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 69  Q
    ||||||||| ||||  |||| |||||||||||| |||||||||||||||    
T  4031503 atcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaaga 4031455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 5576868 - 5576816
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    |||||||||||||||   |||| |||||||||||| | |||||||||||||||    
T  5576868 caatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagatt 5576816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 99 - 147
Target Start/End: Complemental strand, 9770545 - 9770497
Alignment:
Q  99 tattcaaaatcattcaaattttgaaggattgtttaataaattggatttt 147  Q
    |||||||||| ||||||||||  ||| ||| ||||||||||||||||||    
T  9770545 tattcaaaataattcaaatttcaaagaattatttaataaattggatttt 9770497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 23115415 - 23115363
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    |||||||||||||||   |||| |||||||||||| | |||||||||||||||    
T  23115415 caatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagatt 23115363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 38 - 74
Target Start/End: Complemental strand, 29260314 - 29260278
Alignment:
Q  38 ttttaaaaaagtcttgaggtattcaatcaagattttt 74  Q
    ||||| |||||||||| ||||||||||||||||||||    
T  29260314 ttttataaaagtcttgtggtattcaatcaagattttt 29260278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 32711529 - 32711477
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    |||||||||||||||   |||| |||||||||||| | |||||||||||||||    
T  32711529 caatcaagactcttttcaatttaaaaaaagtcttgtgttattcaatcaagatt 32711477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 38 - 74
Target Start/End: Original strand, 35142088 - 35142124
Alignment:
Q  38 ttttaaaaaagtcttgaggtattcaatcaagattttt 74  Q
    |||||||||||||||| ||||||||||||| ||||||    
T  35142088 ttttaaaaaagtcttgtggtattcaatcaaaattttt 35142124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 41 - 73
Target Start/End: Complemental strand, 38806914 - 38806882
Alignment:
Q  41 taaaaaagtcttgaggtattcaatcaagatttt 73  Q
    ||||||| |||||||||||||||||||||||||    
T  38806914 taaaaaaatcttgaggtattcaatcaagatttt 38806882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 165 - 201
Target Start/End: Complemental strand, 39189865 - 39189829
Alignment:
Q  165 aattttaacaagaaaaagtctttcatgaaaagatgag 201  Q
    ||||||||||||||||| ||||||||||||| |||||    
T  39189865 aattttaacaagaaaaaatctttcatgaaaacatgag 39189829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 91 - 147
Target Start/End: Original strand, 41070018 - 41070074
Alignment:
Q  91 tcttgtggtattcaaaatcattcaaattttgaaggattgtttaataaattggatttt 147  Q
    |||||||||||| |||||||||| |||||  || |||||||| |||||||| |||||    
T  41070018 tcttgtggtatttaaaatcattccaatttcaaatgattgtttgataaattgaatttt 41070074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 38 - 74
Target Start/End: Complemental strand, 41386908 - 41386872
Alignment:
Q  38 ttttaaaaaagtcttgaggtattcaatcaagattttt 74  Q
    ||||| |||||||||| ||||||||||||||||||||    
T  41386908 ttttataaaagtcttgtggtattcaatcaagattttt 41386872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 38 - 74
Target Start/End: Original strand, 42275018 - 42275054
Alignment:
Q  38 ttttaaaaaagtcttgaggtattcaatcaagattttt 74  Q
    ||||| |||||||||| ||||||||||||||||||||    
T  42275018 ttttataaaagtcttgtggtattcaatcaagattttt 42275054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 42735524 - 42735472
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    |||||||||||||||   |||| |||||||||||| | |||||||||||||||    
T  42735524 caatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagatt 42735472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 42938364 - 42938312
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    |||||||||||||||   |||| |||||||||||| | |||||||||||||||    
T  42938364 caatcaagactcttttcaatttaaaaaaagtcttgtgttattcaatcaagatt 42938312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 38 - 74
Target Start/End: Complemental strand, 43605402 - 43605366
Alignment:
Q  38 ttttaaaaaagtcttgaggtattcaatcaagattttt 74  Q
    ||||| |||||||||| ||||||||||||||||||||    
T  43605402 ttttataaaagtcttgtggtattcaatcaagattttt 43605366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 43959617 - 43959669
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    |||||||||||||||   |||| |||||||||||| | |||||||||||||||    
T  43959617 caatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagatt 43959669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 134; Significance: 1e-69; HSPs: 82)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 19 - 201
Target Start/End: Complemental strand, 44122105 - 44121923
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||        ||||||||||||||||||||||||||||    
T  44122105 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaaatcttgtggtattcaaaatcattcaaatt 44122006  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtggtgtaattttaacaagaaaaagtctttcatgaaaagatgag 201  Q
    | ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||    
T  44122005 tcgaaggattgtttaataaattggattttgatggattttgtagtgtaattttaacaagaaaaagtctttaatgaaaagatgag 44121923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 19 - 201
Target Start/End: Original strand, 509651 - 509833
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||| ||||       |||||||||||||||||||||||||||||    
T  509651 caatcaagactatttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatt 509750  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtggtgtaattttaacaagaaaaagtctttcatgaaaagatgag 201  Q
    | ||| ||||||||||||||||||||||||||||||||||| |||  ||||||||||||||||||||||||||||||||||||    
T  509751 tcgaacgattgtttaataaattggattttgatggattttgtagtgggattttaacaagaaaaagtctttcatgaaaagatgag 509833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 19 - 198
Target Start/End: Original strand, 37327922 - 37328101
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||       |||||||||||||||||||||||||||||    
T  37327922 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcattacttaaaaaaagtcttgtggtattcaaaatcattcaaatt 37328021  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtggtgtaattttaacaagaaaaagtctttcatgaaaagat 198  Q
    |  |||||||||||||||||||| ||||||||||||||||| || |||||||||||| ||||||||||||||||||||||    
T  37328022 tcaaaggattgtttaataaattgaattttgatggattttgtagtataattttaacaaaaaaaagtctttcatgaaaagat 37328101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 19 - 201
Target Start/End: Original strand, 23101293 - 23101485
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||       |||||||||||||||||||||||||||||    
T  23101293 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatt 23101392  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcatgaaaagatgag 201  Q
    | ||||||||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||||||||||||||||    
T  23101393 tcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgag 23101485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 19 - 201
Target Start/End: Complemental strand, 40460912 - 40460730
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    |||| |||||||||||||||||||||||||||||||| ||||||||||||| ||||||| | ||       |||||||||||||||||||||||||||||    
T  40460912 caattaagactctttgtcattttaaaaaagtcttgagatattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatt 40460813  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtggtgtaattttaacaagaaaaagtctttcatgaaaagatgag 201  Q
    | ||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| |||||    
T  40460812 tcgaatgattgtttaataaattggattttgatggattttgtagtgtaattttaacaagaaaaaatctttcatgaaaatatgag 40460730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 19 - 201
Target Start/End: Complemental strand, 46405636 - 46405454
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| | ||       |||||||||||||||||||||||||||||    
T  46405636 caatcaagactctttgtcgttttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatt 46405537  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtggtgtaattttaacaagaaaaagtctttcatgaaaagatgag 201  Q
    |  || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| || ||||||||||    
T  46405536 tcaaatgattgtttaataaattggattttgatggattttgtggtgtaattttaacaagaaaaagtatttaataaaaagatgag 46405454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 19 - 201
Target Start/End: Original strand, 28342342 - 28342534
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||| ||||       |||||||||||||||||||||||||||||    
T  28342342 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcgagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatt 28342441  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcatgaaaagatgag 201  Q
    | ||||||||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||||||||||||||||    
T  28342442 tcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgag 28342534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 19 - 201
Target Start/End: Complemental strand, 29614969 - 29614777
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||       |||||||| ||||||||||||||||||||    
T  29614969 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtgatattcaaaatcattcaaatt 29614870  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcatgaaaagatgag 201  Q
    | ||||||||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||||||||||||||||    
T  29614869 tcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgag 29614777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 19 - 201
Target Start/End: Original strand, 39784094 - 39784286
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||       ||||||||||||||||||||||| |||||    
T  39784094 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcatttaaatt 39784193  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcatgaaaagatgag 201  Q
    | ||||||||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||||||||||||||||    
T  39784194 tcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgag 39784286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 19 - 201
Target Start/End: Complemental strand, 33892455 - 33892273
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||       |||||||||||||||||||||||||||||    
T  33892455 caatcaacactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaacaaagtcttgtggtattcaaaatcattcaaatt 33892356  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtggtgtaattttaacaagaaaaagtctttcatgaaaagatgag 201  Q
    | ||| ||||||| ||||||||||||||| ||| ||||||| |||||||||||||||||||||||||||||| ||||||||||    
T  33892355 tcgaatgattgttaaataaattggatttttatgaattttgtagtgtaattttaacaagaaaaagtctttcattaaaagatgag 33892273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 19 - 201
Target Start/End: Original strand, 3022921 - 3023113
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| | ||       |||||||||||||||||||||||||||||    
T  3022921 caatcaagactttttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatt 3023020  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcatgaaaagatgag 201  Q
    | ||||||||||||||||||||||||||||||||||||||||          ||||||||||||||||||||||| |||||||||||||||||    
T  3023021 tcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtttttcatgaaaagatgag 3023113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 19 - 200
Target Start/End: Original strand, 29585510 - 29585690
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||| | |||| || | ||       ||||| |||||||||||||||||||||||    
T  29585510 caatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaaaactttt-atcacttaaaaaaagtcttctggtattcaaaatcattcaaatt 29585608  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtggtgtaattttaacaagaaaaagtctttcatgaaaagatga 200  Q
    ||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||    
T  29585609 ttgaaggattgtttaataatttggattttgatggattttgtagtgtaattttaacaagaaaaagtctttcataaaaagatga 29585690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 19 - 195
Target Start/End: Original strand, 19251534 - 19251710
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| | ||       |||| ||||||||||||||||||||||||    
T  19251534 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaaatttttcatcacttaaaaaaagtctcgtggtattcaaaatcattcaaatt 19251633  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtggtgtaattttaacaagaaaaagtctttcatgaaaa 195  Q
    | ||||||||||||||||||||||||||||||||||||| | ||| ||||||| ||| |||||||||||||||||||    
T  19251634 tcgaaggattgtttaataaattggattttgatggattttcttgtgaaattttagcaataaaaagtctttcatgaaaa 19251710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 19 - 195
Target Start/End: Original strand, 39028092 - 39028268
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||| | ||       |||||||| ||||||||||| ||||||||    
T  39028092 caatcaagactctttgtcattttaaaaaagtcttgagatattcaatcaagacttttcatcacttaaaaaaagtcttgtgttattcaaaatcgttcaaatt 39028191  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtggtgtaattttaacaagaaaaagtctttcatgaaaa 195  Q
      ||| ||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||| |||||||||||    
T  39028192 acgaaagattgtttaataaattggattttgatggattttgtagtgtaactttaacaagaaaaagtttttcatgaaaa 39028268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 19 - 201
Target Start/End: Original strand, 18838384 - 18838576
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||   ||       |||||||||||||||||||||||||||||    
T  18838384 caatcaagactctttgtaattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttaaaaaaagtcttgtggtattcaaaatcattcaaatt 18838483  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcatgaaaagatgag 201  Q
    | ||| ||||||||||||||||||||||||||||||||||||          ||||||||||||||||||||||| |||||||||||||||||    
T  18838484 tcgaaagattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagatgag 18838576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 19 - 201
Target Start/End: Original strand, 33382632 - 33382824
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||       ||||  ||||||||||||||||| |||||    
T  33382632 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtctcatggtattcaaaatcatttaaatt 33382731  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcatgaaaagatgag 201  Q
    | ||||||||||||||||||||||||||||||||||||||||          ||||||||||||||||||||||||||| |||||||||||||    
T  33382732 tcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtcttttatgaaaagatgag 33382824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 19 - 195
Target Start/End: Complemental strand, 9882441 - 9882255
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||       |||||||||||||||||||||||||||||    
T  9882441 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatt 9882342  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcatgaaaa 195  Q
    | ||| ||||||||||||||||||||||||||||||||||||          |||||||||||| ||||||||||||||||| ||||    
T  9882341 tcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaagaagaaaaagtctttcataaaaa 9882255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 19 - 201
Target Start/End: Original strand, 8675328 - 8675520
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||       ||||||||||||||||||||||| ||| |    
T  8675328 caatcaaaactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcatttaaact 8675427  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcatgaaaagatgag 201  Q
    | ||||||||||||||||||||||||||||||||||||||||          ||||||||||||||||||||| ||||| |||||||||||||    
T  8675428 tcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaaatcttttatgaaaagatgag 8675520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 19 - 201
Target Start/End: Complemental strand, 28035010 - 28034818
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||| ||||||||||||||||||||||||| ||||||||||||| ||||||| | ||       ||||||||||||||||||| |||||||||    
T  28035010 caatcaagactttttgtcattttaaaaaagtcttgagatattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaattattcaaatt 28034911  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcatgaaaagatgag 201  Q
    |  |||||||||||||||||||||||||||||||||||||||          ||||||||||||||| |||||||||||||||||||||||||    
T  28034910 tcaaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaaaaaaaagtctttcatgaaaagatgag 28034818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 19 - 198
Target Start/End: Original strand, 7993137 - 7993326
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||| | ||||||| | ||       ||||| |||||||||||||||||||||||    
T  7993137 caatcaagactctttgccattttaaaaaagtcttgaggtattcaatcaaaacttttcatcacttaaaaaaagtcttatggtattcaaaatcattcaaatt 7993236  T
Q  119 ttgaaggattgtttaataaattggattttgat----------ggattttgtggtgtaattttaacaagaaaaagtctttcatgaaaagat 198  Q
    | ||||||||||||||||||||| ||||||||          ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  7993237 tcgaaggattgtttaataaattgaattttgatggattgtgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagat 7993326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 19 - 161
Target Start/End: Original strand, 12963696 - 12963838
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||       |||| ||||||| ||||||||||||||||    
T  12963696 caatcaagactctttgtcattttaaaaaagtcttgagatattcaatcaagatttttcattacttaaaaaaagtctcgtggtatccaaaatcattcaaatt 12963795  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtgg 161  Q
    | |||||||||||||||||||| ||||||||||||||||||||    
T  12963796 tcgaaggattgtttaataaattagattttgatggattttgtgg 12963838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 19 - 187
Target Start/End: Complemental strand, 3797262 - 3797093
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||       |||||||||||||||| |||||| |||||    
T  3797262 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaagatcattaaaatt 3797163  T
Q  119 ttgaaggattgtttaataaattggattttgat-ggattttgtggtgtaattttaacaagaaaaagtcttt 187  Q
    |||||||||||||||||||||| ||||||||| ||||||| | ||| ||||||| || ||||||||||||    
T  3797162 ttgaaggattgtttaataaattagattttgatgggattttctagtgaaattttagcatgaaaaagtcttt 3797093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 20 - 161
Target Start/End: Original strand, 10068462 - 10068604
Alignment:
Q  20 aatcaagactctttgtcattttaaaaaagtctt-gaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| | ||       |||||||||||||||||||||||||||||    
T  10068462 aatcaagactctttgccattttaaaaaagtctttgaggtattcaatcaagatttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatt 10068561  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtgg 161  Q
    ||||||||||||||||||||||  |||||||||||||||||||    
T  10068562 ttgaaggattgtttaataaattaaattttgatggattttgtgg 10068604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 19 - 201
Target Start/End: Original strand, 12740368 - 12740559
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| ||||||||||||| |||||||||||||||||| |||||||||||||||| ||||       |||| ||||||||||||||||||||||||    
T  12740368 caatcaagattctttgtcatttttaaaaagtcttgaggtatttaatcaagatttttcatcatttaaaaaaagtctcgtggtattcaaaatcattcaaatt 12740467  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcatgaaaagatgag 201  Q
    |  ||||||||||||||||| ||||||||||| |||||||||          ||||||||||||||||| |||||||||||| ||||||||||    
T  12740468 tcaaaggattgtttaataaa-tggattttgatagattttgtgggattttatagtgtaattttaacaagagaaagtctttcataaaaagatgag 12740559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 19 - 161
Target Start/End: Original strand, 32883777 - 32883919
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||| |||||||||||||||||||||||| ||||||||| |||| ||||||| | ||       |||||||||||||||||||||||||||||    
T  32883777 caatcaagactttttgtcattttaaaaaagtcttgaagtattcaattaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatt 32883876  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtgg 161  Q
    | ||| ||||||||| |||||||||||||||||||||| ||||    
T  32883877 tcgaatgattgtttattaaattggattttgatggatttcgtgg 32883919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 19 - 201
Target Start/End: Complemental strand, 17001228 - 17001056
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| |||| ||||||| | ||        | | ||||||||||||||||||||||||    
T  17001228 caatcaagactctttgtcatttttaaaaagtcttgaggtattcaataaagacttttcatcacttaaaaaaaatatcgtggtattcaaaatcattcaaatt 17001129  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtggtgtaattttaacaagaaaaagtctttcatgaaaagatgag 201  Q
    | ||||||||||||||||||||||||          ||||| |||||||| |||||||||||||||||||||||||| |||||    
T  17001128 tcgaaggattgtttaataaattggat----------tttgtagtgtaattataacaagaaaaagtctttcatgaaaatatgag 17001056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 19 - 201
Target Start/End: Original strand, 47066698 - 47066871
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnn-gtcttgtggtattcaaaatcattcaaat 117  Q
    ||||||| |||||||||||||||||||||||||||| |||||||||||| |  |||||| | ||        ||||||||||||||||||||||||||||    
T  47066698 caatcaaaactctttgtcattttaaaaaagtcttgacgtattcaatcaaaaaatttcatcacttaaaaaaaagtcttgtggtattcaaaatcattcaaat 47066797  T
Q  118 tttgaaggattgtttaataaattggattttgatggattttgtggtgtaattttaacaagaaaaagtctttcatgaaaagatgag 201  Q
    || |||||||||||||||||||          |||||||||| ||||||||||||||||||||| | |||||||||||||||||    
T  47066798 ttcgaaggattgtttaataaat----------tggattttgtagtgtaattttaacaagaaaaaatatttcatgaaaagatgag 47066871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 20 - 201
Target Start/End: Complemental strand, 44256970 - 44256779
Alignment:
Q  20 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 119  Q
    |||||||||| ||||||||||||||||| |||| |||||||||||||||| ||||||| | ||       || | |||||||||||||||||||||||||    
T  44256970 aatcaagactttttgtcattttaaaaaaatcttaaggtattcaatcaagacttttcatcacttaaaaaaagtatcgtggtattcaaaatcattcaaattt 44256871  T
Q  120 tgaaggattgtttaataaattgg----------attttgatggattttgtggtgtaattttaacaagaaaaagtctttcatgaaaagatgag 201  Q
     ||| ||||||||||||||||||          |||||| |||||||||  ||||||||||||||||||||||| |||||| |||| |||||    
T  44256870 cgaatgattgtttaataaattggatttggatgaattttgttggattttgcagtgtaattttaacaagaaaaagtttttcatcaaaatatgag 44256779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 19 - 161
Target Start/End: Original strand, 30440798 - 30440940
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| |||||||||||| |||||| ||||| ||||||||||||||| | || || | ||       |||| ||||||||||||||||||||||||    
T  30440798 caatcaagattctttgtcatttaaaaaaaatcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatt 30440897  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtgg 161  Q
    | |||||||||||||||||||  ||||||||||||||||||||    
T  30440898 tcgaaggattgtttaataaatcagattttgatggattttgtgg 30440940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 19 - 201
Target Start/End: Original strand, 41827309 - 41827491
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||| ||||||||||||||||| ||||||||| ||||||||||| ||||||| | ||       |||||||||||||||||||              
T  41827309 caatcaagactttttgtcattttaaaaaaatcttgaggtgttcaatcaagacttttcataacttaaaaaaagtcttgtggtattcaaaat---------- 41827398  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcatgaaaagatgag 201  Q
    ||||||||||||||||||||||||||||||||||||||||||          |||||||||||||||||||| |||||||||||||| |||||    
T  41827399 ttgaaggattgtttaataaattggattttgatggattttgtgggattgtgtagtgtaattttaacaagaaaatgtctttcatgaaaatatgag 41827491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 19 - 161
Target Start/End: Complemental strand, 43581295 - 43581153
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| |||||||||||| ||||||||||||  |||||||||||||| | || || | ||       |||| ||||||||||||||||||||||||    
T  43581295 caatcaagattctttgtcatttaaaaaaagtcttgttgtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatt 43581196  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtgg 161  Q
    | |||||||||||||||||||  ||||||||||||||||||||    
T  43581195 tcgaaggattgtttaataaatcagattttgatggattttgtgg 43581153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 19 - 201
Target Start/End: Original strand, 973186 - 973378
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| |||||||||||| |||||||||||| ||||||||||||||| | || || | ||        | | ||||||||||||||||||||||||    
T  973186 caatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaatttagtggtattcaaaatcattcaaatt 973285  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcatgaaaagatgag 201  Q
    | |||||||||||||||||||  |||||||||||||||||||          ||| ||||||| ||||||||||||||||||||||| |||||    
T  973286 tcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcaagaaaaagtctttcatgaaaacatgag 973378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 19 - 159
Target Start/End: Complemental strand, 40996854 - 40996714
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| |||||||||||| |||||||||||| ||||||||||||||| | || ||   ||       |||| ||||||||||||||||||||||||    
T  40996854 caatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcgcttaaaaaaagtctagtggtattcaaaatcattcaaatt 40996755  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgt 159  Q
    | |||||||||||||||||||  ||||||||||||||||||    
T  40996754 tcgaaggattgtttaataaatcagattttgatggattttgt 40996714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 19 - 201
Target Start/End: Original strand, 9179875 - 9180057
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| |||||||||||| |||||||| |||  |||||||||||||| | ||||| | ||       |||||||||||| |||||||| | |||||    
T  9179875 caatcaagattctttgtcatttaaaaaaagttttgtcgtattcaatcaagactcttcatcacttaaaaaaagtcttgtggtatacaaaatcacttaaatt 9179974  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtggtgtaattttaacaagaaaaagtctttcatgaaaagatgag 201  Q
      ||||||||||||||||||||||||||||  ||||||| | ||| | ||||| ||  ||||||||||||||||||| |||||    
T  9179975 ccgaaggattgtttaataaattggattttgtgggattttctagtgaatttttagcataaaaaagtctttcatgaaaacatgag 9180057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 19 - 161
Target Start/End: Complemental strand, 20275468 - 20275326
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| || ||||||||| |||||||||||  ||||||||||||||| | || || | ||       ||||| |||||||||||||||||||||||    
T  20275468 caatcaagattccttgtcatttaaaaaaagtcttatggtattcaatcaagactcttaatcacttaaaaaaagtcttatggtattcaaaatcattcaaatt 20275369  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtgg 161  Q
    | |||||||||||||||||||  ||||||||||||||||||||    
T  20275368 tcgaaggattgtttaataaatcagattttgatggattttgtgg 20275326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 19 - 161
Target Start/End: Original strand, 47914268 - 47914410
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| |||||||||||| ||||||||| || ||||||||||||||| | || || | ||       |||| ||| ||||||||||||||||||||    
T  47914268 caatcaagattctttgtcatttaaaaaaagtcatgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtgatattcaaaatcattcaaatt 47914367  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtgg 161  Q
    | |||||||||||||||||||  ||||||||||||||||||||    
T  47914368 tcgaaggattgtttaataaataagattttgatggattttgtgg 47914410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 20 - 157
Target Start/End: Complemental strand, 10676624 - 10676487
Alignment:
Q  20 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 119  Q
    |||||||||||||||  |||| ||||| |||||| ||||||||||||||| ||||||| | ||       ||||  | ||||||||||||||||||||||    
T  10676624 aatcaagactctttgcaatttaaaaaaggtcttgtggtattcaatcaagacttttcatcacttaaaaaaagtctcattgtattcaaaatcattcaaattt 10676525  T
Q  120 tgaaggattgtttaataaattggattttgatggatttt 157  Q
     |||||||||||||||||||||||||| ||||||||||    
T  10676524 cgaaggattgtttaataaattggatttggatggatttt 10676487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 19 - 161
Target Start/End: Complemental strand, 44343601 - 44343459
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| |||||||||||| |||||||||||| | ||||||||||||| | || || | ||       || | |||||||| |||||||||||||||    
T  44343601 caatcaagattctttgtcatttaaaaaaagtcttgtgatattcaatcaagactcttaatcacttaaaaaaagtttagtggtatttaaaatcattcaaatt 44343502  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtgg 161  Q
    | |||||||||||||||||||  ||||||||||||||||||||    
T  44343501 tcgaaggattgtttaataaatcagattttgatggattttgtgg 44343459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 19 - 161
Target Start/End: Original strand, 47879170 - 47879312
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| |||||||||||| ||||||||| || ||||||||||||||| | || || | ||       |||| ||| ||||||||||||||||||||    
T  47879170 caatcaagattctttgtcatttaaaaaaagtcatgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtgatattcaaaatcattcaaatt 47879269  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtgg 161  Q
    |  ||||||||||||||||||  ||||||||||||||||||||    
T  47879270 taaaaggattgtttaataaatcagattttgatggattttgtgg 47879312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 19 - 160
Target Start/End: Original strand, 12893410 - 12893551
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| |||||||||||| |||||||||||| |||||| |||||||| | || || | ||       ||||  |||||||||||||||||||||||    
T  12893410 caatcaagattctttgtcatttaaaaaaagtcttgtggtatttaatcaagactcttaatcacttaaaaaaagtctaatggtattcaaaatcattcaaatt 12893509  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtg 160  Q
    | |||| ||||||||||||||  |||||||||||||||||||    
T  12893510 tcgaagaattgtttaataaatcagattttgatggattttgtg 12893551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 37 - 161
Target Start/End: Complemental strand, 7718549 - 7718425
Alignment:
Q  37 attttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaattttgaaggattgtttaata 136  Q
    |||| |||||||||||| ||||||||||||||| | || || | ||       |||| ||||||||||||||||||||||||| ||||||||||||||||    
T  7718549 atttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaata 7718450  T
Q  137 aattggattttgatggattttgtgg 161  Q
    |||  ||||||||||||||||||||    
T  7718449 aatcagattttgatggattttgtgg 7718425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 95 - 161
Target Start/End: Complemental strand, 32143046 - 32142980
Alignment:
Q  95 gtggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttgatggattttgtgg 161  Q
    |||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||    
T  32143046 gtggtattcaaaatcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgg 32142980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 19 - 161
Target Start/End: Original strand, 34009014 - 34009157
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtctt-gtggtattcaaaatcattcaaat 117  Q
    ||||||||| | |||||||||| |||||||||||| ||||||||||||| | | || || | ||       ||| | |||||||||||||||||||||||    
T  34009014 caatcaagattatttgtcatttaaaaaaagtcttgtggtattcaatcaacactcttaatcacttaaaaaaagtcctagtggtattcaaaatcattcaaat 34009113  T
Q  118 tttgaaggattgtttaataaattggattttgatggattttgtgg 161  Q
    || |||||||||||||||||||  ||||||||||||||||||||    
T  34009114 ttcgaaggattgtttaataaatcagattttgatggattttgtgg 34009157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 31 - 161
Target Start/End: Complemental strand, 7719453 - 7719323
Alignment:
Q  31 tttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaattttgaaggattgt 130  Q
    |||||||||| |||||||||||| ||||||||||||||| | || || | ||        ||| ||||||||||||||||||||||||| ||| ||||||    
T  7719453 tttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaatctagtggtattcaaaatcattcaaatttcgaatgattgt 7719354  T
Q  131 ttaataaattggattttgatggattttgtgg 161  Q
    |||||||||  ||||||||||||||||||||    
T  7719353 ttaataaatcagattttgatggattttgtgg 7719323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 19 - 161
Target Start/End: Complemental strand, 18914940 - 18914798
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||| | |||||||| ||| |||||||||||| ||||||||||||||| | || || | ||       |||| ||||||||||||||||||||||||    
T  18914940 caatcaaaattctttgtcctttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatt 18914841  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtgg 161  Q
    |  |||| |||||||||||||  ||||||||||||||||||||    
T  18914840 tcaaaggtttgtttaataaatcagattttgatggattttgtgg 18914798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 19 - 161
Target Start/End: Original strand, 25805687 - 25805829
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| ||||||| |||| |||||| ||| | ||||||||||||| ||||||||| | ||          ||||||||||||||||||||||||||    
T  25805687 caatcaagattctttgtaatttaaaaaaaatctagtggtattcaatcaaaatttttcatcacttaaaaaaaaatttgtggtattcaaaatcattcaaatt 25805786  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtgg 161  Q
    | | ||||||||||||||||||| ||| |||||||||||||||    
T  25805787 tcgtaggattgtttaataaattgaattatgatggattttgtgg 25805829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 19 - 161
Target Start/End: Original strand, 34695275 - 34695417
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| || ||||||||| |||||||| ||| ||||||||||||||| | || || | ||       |||  ||||||||||||| ||||||||||    
T  34695275 caatcaagattccttgtcatttaaaaaaagttttgtggtattcaatcaagactcttaatcacttaaaaaaagtccagtggtattcaaaaccattcaaatt 34695374  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtgg 161  Q
    | |||||||||||||||||||  ||||||||||||||||||||    
T  34695375 tcgaaggattgtttaataaatcagattttgatggattttgtgg 34695417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 96 - 193
Target Start/End: Complemental strand, 43187485 - 43187378
Alignment:
Q  96 tggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttgat----------ggattttgtggtgtaattttaacaagaaaaagtct 185  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||          ||||||| | ||| |||||||||||||||||||||    
T  43187485 tggtattcaaaatcattcaaattttgaagcattgtttaataaattggattttgatgaattttgtcggattttctagtgaaattttaacaagaaaaagtct 43187386  T
Q  186 ttcatgaa 193  Q
    ||||||||    
T  43187385 ttcatgaa 43187378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 110 - 201
Target Start/End: Complemental strand, 37972981 - 37972880
Alignment:
Q  110 attcaaattttgaaggattgtttaataaattggattttgatggattttgtgg----------tgtaattttaacaagaaaaagtctttcatgaaaagatg 199  Q
    |||||||||| |||||||| ||||||||||||||||||||||||||||| ||          ||||||||||||||||||||||||||||||||||||||    
T  37972981 attcaaatttcgaaggattatttaataaattggattttgatggattttgcgggattttatagtgtaattttaacaagaaaaagtctttcatgaaaagatg 37972882  T
Q  200 ag 201  Q
    ||    
T  37972881 ag 37972880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 95 - 161
Target Start/End: Original strand, 43679492 - 43679558
Alignment:
Q  95 gtggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttgatggattttgtgg 161  Q
    ||||||||||||||||||||||||| |||||||||||||||||||  ||||||||||||||||||||    
T  43679492 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgg 43679558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 98 - 195
Target Start/End: Original strand, 727594 - 727691
Alignment:
Q  98 gtattcaaaatcattcaaattttgaaggattgtttaataaattggattttgatggattttgtggtgtaattttaacaagaaaaagtctttcatgaaaa 195  Q
    ||||||||||||||||||||||  ||||||||||||||||||  |||||||  ||||||| | ||| ||||||| || ||||||||||||||||||||    
T  727594 gtattcaaaatcattcaaatttcaaaggattgtttaataaatcagattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaa 727691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 19 - 200
Target Start/End: Complemental strand, 44623481 - 44623300
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    |||||||||||||||||||||| |||||||||||| |||||| |||||||| | ||||| | ||       |||| ||| |||||||||||||||| |||    
T  44623481 caatcaagactctttgtcatttaaaaaaagtcttgtggtatttaatcaagactcttcatcactttaaaaaggtctcgtgatattcaaaatcattcatatt 44623382  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtggtgtaattttaacaagaaaaagtctttcatgaaaagatga 200  Q
    |  || || |||||||||||||| ||||||  | ||||| | ||| |||||||  | |||||||||| |||| |||| ||||    
T  44623381 tctaaagactgtttaataaattgaattttgtggaattttctagtgaaattttagaatgaaaaagtctctcataaaaatatga 44623300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 90 - 157
Target Start/End: Original strand, 31638948 - 31639015
Alignment:
Q  90 gtcttgtggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttgatggatttt 157  Q
    |||| ||||||||||||||||||||||||| |||||||||||||||||||  ||||||||||||||||    
T  31638948 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggatttt 31639015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 19 - 119
Target Start/End: Original strand, 29893076 - 29893176
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||| |||| |||||||||||||||||| ||||||| | ||       ||||||| ||||| ||||| |||||||||    
T  29893076 caatcaagactctttgtcattttaaaacagtcatgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtagtatttaaaataattcaaatt 29893175  T
Q  119 t 119  Q
    |    
T  29893176 t 29893176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 99 - 201
Target Start/End: Original strand, 19810874 - 19810976
Alignment:
Q  99 tattcaaaatcattcaaattttgaaggattgtttaataaattggattttgatggattttgtggtgtaattttaacaagaaaaagtctttcatgaaaagat 198  Q
    |||||||||||||||||||||  || ||||||||||||||||||||||||  | ||||| | ||| ||||||| ||  |||| |||||||||||||| ||    
T  19810874 tattcaaaatcattcaaatttcaaatgattgtttaataaattggattttgtggaattttctagtgaaattttagcataaaaatgtctttcatgaaaacat 19810973  T
Q  199 gag 201  Q
    |||    
T  19810974 gag 19810976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 93 - 154
Target Start/End: Original strand, 447852 - 447913
Alignment:
Q  93 ttgtggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttgatggat 154  Q
    |||||||||| |||||||||||||||| ||| ||||||||||| ||||||||||||||||||    
T  447852 ttgtggtatttaaaatcattcaaatttcgaatgattgtttaattaattggattttgatggat 447913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 96 - 161
Target Start/End: Complemental strand, 39219504 - 39219440
Alignment:
Q  96 tggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttgatggattttgtgg 161  Q
    ||||||||||||||||||||||||||| | ||||||||||||||  ||||||||||||||||||||    
T  39219504 tggtattcaaaatcattcaaattttgatg-attgtttaataaatcagattttgatggattttgtgg 39219440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 95 - 161
Target Start/End: Original strand, 7113530 - 7113596
Alignment:
Q  95 gtggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttgatggattttgtgg 161  Q
    |||||||||||||| |||||||||| | |||||||||||||||||  ||||||||| ||||||||||    
T  7113530 gtggtattcaaaataattcaaatttcgcaggattgtttaataaatcagattttgatagattttgtgg 7113596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 19 - 69
Target Start/End: Complemental strand, 48117798 - 48117748
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 69  Q
    |||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  48117798 caatcaagactctttgtcatttttgaaaagtcttgaggtattcaatcaaga 48117748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 19 - 150
Target Start/End: Complemental strand, 1470437 - 1470307
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    |||| |||||| |||||||||| |||||||||||| | ||||||||  | | ||||||| ||||       || ||||||||||||||||| ||||||||    
T  1470437 caattaagactatttgtcatttaaaaaaagtcttgtgatattcaatataaacttttcatcatttaaaaaa-gtattgtggtattcaaaatcgttcaaatt 1470339  T
Q  119 ttgaaggattgtttaataaattggattttgat 150  Q
    || ||| |||||||||| |||| |||||||||    
T  1470338 ttaaagcattgtttaatgaattagattttgat 1470307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 31 - 73
Target Start/End: Original strand, 10616955 - 10616997
Alignment:
Q  31 tttgtcattttaaaaaagtcttgaggtattcaatcaagatttt 73  Q
    ||||||||||| ||||||||||||||||||| |||||||||||    
T  10616955 tttgtcatttttaaaaagtcttgaggtattcgatcaagatttt 10616997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 69
Target Start/End: Original strand, 12963654 - 12963704
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 69  Q
    ||||||||||||||||  | || |||||||||||| |||||||||||||||    
T  12963654 caatcaagactctttgcaacttaaaaaaagtcttgtggtattcaatcaaga 12963704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 69
Target Start/End: Original strand, 19251492 - 19251542
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 69  Q
    ||||||||||||||||  | || |||||||||||| |||||||||||||||    
T  19251492 caatcaagactctttgcaacttaaaaaaagtcttgtggtattcaatcaaga 19251542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 69
Target Start/End: Complemental strand, 29615011 - 29614961
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 69  Q
    ||||||||||| ||||  |||| |||||||||||| |||||||||||||||    
T  29615011 caatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaaga 29614961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 69
Target Start/End: Original strand, 34695191 - 34695241
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 69  Q
    |||||||||||||||   |||| |||||||||||| |||||||||||||||    
T  34695191 caatcaagactctttccaatttaaaaaaagtcttgtggtattcaatcaaga 34695241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 69
Target Start/End: Original strand, 39784052 - 39784102
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 69  Q
    ||||||||||| ||||  |||| |||||||||||| |||||||||||||||    
T  39784052 caatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaaga 39784102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 115 - 148
Target Start/End: Original strand, 28762618 - 28762651
Alignment:
Q  115 aattttgaaggattgtttaataaattggattttg 148  Q
    ||||||||||||||||||||||||||| ||||||    
T  28762618 aattttgaaggattgtttaataaattgtattttg 28762651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 115 - 148
Target Start/End: Complemental strand, 28854141 - 28854108
Alignment:
Q  115 aattttgaaggattgtttaataaattggattttg 148  Q
    ||||||||||||||||||||||||||| ||||||    
T  28854141 aattttgaaggattgtttaataaattgtattttg 28854108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 43187590 - 43187545
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaat 64  Q
    ||||||||||||||||| |||| |||||||||||  ||||||||||    
T  43187590 caatcaagactctttgtaatttaaaaaaagtcttatggtattcaat 43187545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 67
Target Start/End: Original strand, 727514 - 727562
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaa 67  Q
    ||||||| | |||||||||||| |||||||||||| | |||||||||||    
T  727514 caatcaaaattctttgtcatttaaaaaaagtcttgtgatattcaatcaa 727562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 12893368 - 12893420
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    |||||||||||||||   |||| |||||||||||| | |||||||||||||||    
T  12893368 caatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagatt 12893420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 67
Target Start/End: Complemental strand, 18914982 - 18914934
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaa 67  Q
    |||||||||||||||   ||||||||||||||||| | |||||||||||    
T  18914982 caatcaagactctttccaattttaaaaaagtcttgtgttattcaatcaa 18914934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 38 - 74
Target Start/End: Complemental strand, 27418680 - 27418644
Alignment:
Q  38 ttttaaaaaagtcttgaggtattcaatcaagattttt 74  Q
    ||||| |||||||||| ||||||||||||||||||||    
T  27418680 ttttataaaagtcttgtggtattcaatcaagattttt 27418644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 30440756 - 30440808
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    |||||||||||||||   |||| |||||||||||| | |||||||||||||||    
T  30440756 caatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagatt 30440808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 41 - 73
Target Start/End: Original strand, 32630687 - 32630719
Alignment:
Q  41 taaaaaagtcttgaggtattcaatcaagatttt 73  Q
    ||||||| |||||||||||||||||||||||||    
T  32630687 taaaaaaatcttgaggtattcaatcaagatttt 32630719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 34008972 - 34009024
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    |||||||||||||||   |||| |||||||||||| | |||||||||||||||    
T  34008972 caatcaagactcttttcaatttaaaaaaagtcttgtgttattcaatcaagatt 34009024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 34695233 - 34695285
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    |||||||||||||||   |||| |||||||||||| | |||||||||||||||    
T  34695233 caatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagatt 34695285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 38 - 74
Target Start/End: Original strand, 40097140 - 40097176
Alignment:
Q  38 ttttaaaaaagtcttgaggtattcaatcaagattttt 74  Q
    ||||||||||||||| |||||||||||||||| ||||    
T  40097140 ttttaaaaaagtctttaggtattcaatcaagactttt 40097176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 43581337 - 43581285
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    |||||||||||||||   |||| |||||||||||| | |||||||||||||||    
T  43581337 caatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagatt 43581285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 44343643 - 44343591
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    |||||||||||||||   |||| |||||||||||| | |||||||||||||||    
T  44343643 caatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagatt 44343591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 47879128 - 47879180
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    ||||||| |||||||   ||||||||||||||||| | |||||||||||||||    
T  47879128 caatcaatactcttttcaattttaaaaaagtcttgtgttattcaatcaagatt 47879180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 47914226 - 47914278
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    ||||||| |||||||   ||||||||||||||||| | |||||||||||||||    
T  47914226 caatcaatactcttttcaattttaaaaaagtcttgtgttattcaatcaagatt 47914278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 134; Significance: 1e-69; HSPs: 64)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 19 - 201
Target Start/End: Complemental strand, 38536295 - 38536113
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| ||       ||||||||||||||||||| |||||||||    
T  38536295 caatcaagactctttgtcattttaaaaaagttttgaggtattcaatcaagacttttcattacttaacaaaagtcttgtggtattcaaaattattcaaatt 38536196  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtggtgtaattttaacaagaaaaagtctttcatgaaaagatgag 201  Q
    |  |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  38536195 tcaaaggattgtttaataaattggattttgatggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgag 38536113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 19 - 201
Target Start/End: Complemental strand, 38558513 - 38558331
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| ||       ||||||||||||||||||| |||||||||    
T  38558513 caatcaagactctttgtcattttaaaaaagttttgaggtattcaatcaagacttttcattacttaacaaaagtcttgtggtattcaaaattattcaaatt 38558414  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtggtgtaattttaacaagaaaaagtctttcatgaaaagatgag 201  Q
    |  |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  38558413 tcaaaggattgtttaataaattggattttgatggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgag 38558331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 19 - 201
Target Start/End: Complemental strand, 29396594 - 29396402
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||       |||||||||||||||||||||||||||||    
T  29396594 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatt 29396495  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcatgaaaagatgag 201  Q
    | ||||||||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||||||||||||||||    
T  29396494 tcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgag 29396402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 19 - 201
Target Start/End: Original strand, 51701574 - 51701766
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||       |||||||||||||||||||||||||||||    
T  51701574 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatt 51701673  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcatgaaaagatgag 201  Q
    | ||||||||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||||||||||||||||    
T  51701674 tcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgag 51701766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 19 - 201
Target Start/End: Original strand, 6312568 - 6312760
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||       |||||||||||||||||||||||||||||    
T  6312568 caattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatt 6312667  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcatgaaaagatgag 201  Q
    | ||||||||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||||||||||||||||    
T  6312668 tcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgag 6312760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 19 - 201
Target Start/End: Original strand, 25612151 - 25612343
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||       |||||||||||||||||||||||||||||    
T  25612151 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatt 25612250  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcatgaaaagatgag 201  Q
    |  |||||||||||||||||||||||||||||||||||||||          || ||||||||||||||||||||||||||||||||||||||    
T  25612251 tcaaaggattgtttaataaattggattttgatggattttgtgggattttgtagtataattttaacaagaaaaagtctttcatgaaaagatgag 25612343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 19 - 201
Target Start/End: Original strand, 29219282 - 29219462
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    |||||||||||||  |||||||||||||||||||||| ||||||||||||| ||||||| | ||       |||||||||||||||||||||||||||||    
T  29219282 caatcaagactct--gtcattttaaaaaagtcttgagatattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatt 29219379  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtggtgtaattttaacaagaaaaagtctttcatgaaaagatgag 201  Q
      ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||    
T  29219380 aagaaggattgtttaataaattggattttgatggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagatgag 29219462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 19 - 201
Target Start/End: Complemental strand, 48177668 - 48177476
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||| | ||       |||||||||||||||||||||||||||||    
T  48177668 caatcaatactctttgtcattttaaaaaagtcttgaggtattcaatcaaaatttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatt 48177569  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcatgaaaagatgag 201  Q
    | ||| ||||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||||||||||||||||    
T  48177568 tcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgag 48177476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 19 - 201
Target Start/End: Original strand, 18798485 - 18798657
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||       |||||||||||||||||||||||||||||    
T  18798485 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatt 18798584  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtggtgtaattttaacaagaaaaagtctttcatgaaaagatgag 201  Q
    | |||||||||||||||||||          |||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  18798585 tcgaaggattgtttaataaat----------tggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgag 18798657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 19 - 201
Target Start/End: Complemental strand, 9322706 - 9322514
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| ||||       ||| |||||||||||||||||||||||||    
T  9322706 caatcaagactctttgtcattttaaaaaagtcttgaggtattcgatcaagacttttcatcatttaaaaaaagtcctgtggtattcaaaatcattcaaatt 9322607  T
Q  119 ttgaaggattgtttaataaattggattttgatgga----------ttttgtggtgtaattttaacaagaaaaagtctttcatgaaaagatgag 201  Q
    | ||||||||||||||||||||| |||||||||||          |||||| |||||||||||||||||||||||||||||||||||||||||    
T  9322606 tagaaggattgtttaataaattgaattttgatggattttatgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgag 9322514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 19 - 201
Target Start/End: Complemental strand, 5495302 - 5495120
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||       |||| |||||||||||||||||| |||||    
T  5495302 caattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtctcgtggtattcaaaatcatttaaatt 5495203  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtggtgtaattttaacaagaaaaagtctttcatgaaaagatgag 201  Q
    |  ||||||| |||||||||||||||||||  ||||||||| |||||||||||||||||||||||| || |||||||||||||    
T  5495202 tcaaaggattatttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtcctttatgaaaagatgag 5495120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 19 - 198
Target Start/End: Original strand, 46328036 - 46328225
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||       |||| ||||||||||||||||||||||||    
T  46328036 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttacaaaaagtctcgtggtattcaaaatcattcaaatt 46328135  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcatgaaaagat 198  Q
    | ||||||||||||||| ||||||||||||||||||||||||          |||||||||||||||||||||||||||||| |||||||    
T  46328136 tcgaaggattgtttaattaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcataaaaagat 46328225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 19 - 201
Target Start/End: Complemental strand, 15835259 - 15835067
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| || |||| ||||        ||||||||||||||||||||||||||||    
T  15835259 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttctcatcatttaaaaaaaatcttgtggtattcaaaatcattcaaatt 15835160  T
Q  119 ttgaaggattgtttaataaattggattttgatgga----------ttttgtggtgtaattttaacaagaaaaagtctttcatgaaaagatgag 201  Q
       ||||||||||||||||||||||||||||||||          |||||| |||||||||||||||||||||||||||||||||||||||||    
T  15835159 gcaaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgag 15835067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 19 - 201
Target Start/End: Complemental strand, 28387599 - 28387407
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| ||||        |||||||||||||||| |||||||||||    
T  28387599 caatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaaatcttgtggtattcaaattcattcaaatt 28387500  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcatgaaaagatgag 201  Q
    | ||||||||||||||||||||||||||||||||||||||||          || |||||||||||| |||||||||||||| ||||||||||    
T  28387499 tcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtttaattttaacaaaaaaaagtctttcataaaaagatgag 28387407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 19 - 201
Target Start/End: Complemental strand, 48668978 - 48668799
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||   |||||||| | ||       |||  |||||||||||||| |||||||||    
T  48668978 caatcaagactctttgtcattttaaaaaagttttgaggtattcaatca---tttttcatcacttaaaaaaagtcacgtggtattcaaaattattcaaatt 48668882  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtggtgtaattttaacaagaaaaagtctttcatgaaaagatgag 201  Q
    | ||| ||||||||||||||||||||||||  ||||| ||| |||||||||||||||||||||||||||||||||||||||||    
T  48668881 tcgaaagattgtttaataaattggattttgtgggattctgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgag 48668799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 19 - 147
Target Start/End: Original strand, 49230880 - 49231008
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||       |||||||||||||||||||||||||||||    
T  49230880 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatt 49230979  T
Q  119 ttgaaggattgtttaataaattggatttt 147  Q
    | |||||||| ||||||||||||||||||    
T  49230980 tcgaaggattatttaataaattggatttt 49231008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 19 - 201
Target Start/End: Original strand, 45272581 - 45272761
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||| |||||||||||||||||||| |||||||||||||||||||||| ||||||| | ||        ||| |||||||||||||| ||| |||||    
T  45272581 caatcaaaactctttgtcattttaaaaa-gtcttgaggtattcaatcaagacttttcatcacttaaaaaaaatctcgtggtattcaaaattatttaaatt 45272679  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtggtgtaattttaacaagaaaaagtctttcatgaaaagatgag 201  Q
    | ||||||| ||||||||||||||||||||   |||||||| ||||||||||||||||||||| ||||| || ||||||||||    
T  45272680 tcgaaggat-gtttaataaattggattttgtgagattttgtagtgtaattttaacaagaaaaaatcttttataaaaagatgag 45272761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 19 - 160
Target Start/End: Complemental strand, 9577638 - 9577497
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    |||||||||| |||||||||||||||||||||||||| |||| |||||| | |||| || | ||       |||||||| ||||||||||||||||||||    
T  9577638 caatcaagaccctttgtcattttaaaaaagtcttgagatattaaatcaaaactttttatcacttaaaaaaagtcttgtgatattcaaaatcattcaaatt 9577539  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtg 160  Q
    | ||||||||||||||||||||||||||||||||||||||||    
T  9577538 tagaaggattgtttaataaattggattttgatggattttgtg 9577497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 19 - 161
Target Start/End: Complemental strand, 50192757 - 50192614
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnn-gtcttgtggtattcaaaatcattcaaat 117  Q
    ||||||||| || |||||||||||||||||||||| ||||||||||||||| | || || | ||        |||| |||||||||||||||||||||||    
T  50192757 caatcaagattccttgtcattttaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaagtctagtggtattcaaaatcattcaaat 50192658  T
Q  118 tttgaaggattgtttaataaattggattttgatggattttgtgg 161  Q
    ||||||||||||||||||||||  ||||||||||||||||||||    
T  50192657 tttgaaggattgtttaataaatcagattttgatggattttgtgg 50192614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 19 - 161
Target Start/End: Original strand, 21222141 - 21222283
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| |||||||||||| |||||||||||| ||||||||||||||| | || || | ||       |||| | ||||||||||||||||||||||    
T  21222141 caatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagaggtattcaaaatcattcaaatt 21222240  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtgg 161  Q
    | |||||||||||||||||||  ||||||||||||||||||||    
T  21222241 tcgaaggattgtttaataaataagattttgatggattttgtgg 21222283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 19 - 161
Target Start/End: Original strand, 35279666 - 35279808
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| |||||||||||| |||||||||||| ||||||||||||||| | || || | ||       |||| |||||||||||||||||| |||||    
T  35279666 caatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactattaatcacttaaaaaaagtctagtggtattcaaaatcatttaaatt 35279765  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtgg 161  Q
    | |||||||||||||||||||  ||||||||||||||||||||    
T  35279766 tcgaaggattgtttaataaatcagattttgatggattttgtgg 35279808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 19 - 160
Target Start/End: Complemental strand, 32589159 - 32589018
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||| |||||  | || | ||||| || |||||||||||| | ||||| | ||       |||||||||||||||||||||||||||||    
T  32589159 caatcaagactctttatcattaaacaagaatcttgtggcattcaatcaagactcttcatcacttaaaagaagtcttgtggtattcaaaatcattcaaatt 32589060  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtg 160  Q
    ||||||||||||||||||||| ||||||||||||||||||||    
T  32589059 ttgaaggattgtttaataaatcggattttgatggattttgtg 32589018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 19 - 161
Target Start/End: Complemental strand, 19452014 - 19451872
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| |||||||||||| |||||||||||| |||||| |||||||| | || || | ||       |||| ||||||||||||||||||||||||    
T  19452014 caatcaagattctttgtcatttaaaaaaagtcttgtggtatttaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatt 19451915  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtgg 161  Q
    | ||||||| |||||||||||  ||||||||||||||||||||    
T  19451914 tcgaaggatcgtttaataaatcagattttgatggattttgtgg 19451872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 19 - 161
Target Start/End: Complemental strand, 28824578 - 28824437
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| | |||||||||| |||||||||||| ||||||||||||||| | || || | ||       |||||||||||||||||||||||||||||    
T  28824578 caatcaagattatttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaacagtcttgtggtattcaaaatcattcaaatt 28824479  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtgg 161  Q
    | ||| |||||||||||||||  ||||||||||||||||||||    
T  28824478 tcgaa-gattgtttaataaatcagattttgatggattttgtgg 28824437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 19 - 156
Target Start/End: Complemental strand, 35679334 - 35679197
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| |||||||||||| |||||| |||||  |||||||||||||| | || || | ||       ||| |||||||||||||||||||||||||    
T  35679334 caatcaagattctttgtcatttaaaaaaaatcttgtagtattcaatcaagactcttaatcacttaaaaaaagtcatgtggtattcaaaatcattcaaatt 35679235  T
Q  119 ttgaaggattgtttaataaattggattttgatggattt 156  Q
    | |||||||||||||||||||  |||||||||||||||    
T  35679234 tcgaaggattgtttaataaatcagattttgatggattt 35679197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 90 - 201
Target Start/End: Original strand, 33025578 - 33025689
Alignment:
Q  90 gtcttgtggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttgatggattttgtggtgtaattttaacaagaaaaagtctttca 189  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||  |||||||  ||||||| |  |  ||||||| || ||||||||||||||    
T  33025578 gtcttgtggtattcaaaatcattcaaattttgaaggattgtttaatacatcagattttgtgggattttctaataaaattttagcatgaaaaagtctttca 33025677  T
Q  190 tgaaaagatgag 201  Q
    |||||| |||||    
T  33025678 tgaaaacatgag 33025689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 19 - 159
Target Start/End: Complemental strand, 37014846 - 37014706
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    |||| |||||||||||||||||  || |||||||| ||||||||||||| ||| ||||| | ||       |||||||| ||||||||||||||||||||    
T  37014846 caattaagactctttgtcatttagaagaagtcttgtggtattcaatcaatattcttcatcacttaaaaaaagtcttgtgatattcaaaatcattcaaatt 37014747  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgt 159  Q
    |  || |||||||| |||||||| |||||||||||||||||    
T  37014746 tctaaagattgttttataaattgaattttgatggattttgt 37014706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 19 - 161
Target Start/End: Complemental strand, 6304459 - 6304316
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagattt-ttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaat 117  Q
    ||||||||| |||||||||||| |||||||||||| ||||||||| ||| |  | || || | ||       |||| |||||||||||||||||||||||    
T  6304459 caatcaagattctttgtcatttaaaaaaagtcttgtggtattcaaccaaaaactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaat 6304360  T
Q  118 tttgaaggattgtttaataaattggattttgatggattttgtgg 161  Q
    || |||||||||||||||||||  ||||||||||||||||||||    
T  6304359 ttcgaaggattgtttaataaatcagattttgatggattttgtgg 6304316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 19 - 161
Target Start/End: Complemental strand, 45760216 - 45760073
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaa-gtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaat 117  Q
    ||||||||| ||||||||| ||||||||| ||| || ||||||||||||||| | || || | ||       |||| ||||||||||||||||||||||     
T  45760216 caatcaagattctttgtcaatttaaaaaaagtcatgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaac 45760117  T
Q  118 tttgaaggattgtttaataaattggattttgatggattttgtgg 161  Q
    || |||||||||||||||||||  ||||||||||||||||||||    
T  45760116 ttcgaaggattgtttaataaatcagattttgatggattttgtgg 45760073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 19 - 160
Target Start/End: Original strand, 730142 - 730284
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnn-gtcttgtggtattcaaaatcattcaaat 117  Q
    ||||||||| |||||||||||| |||||||||||| ||||||||||||||| | || || | ||        |||| |||||||||||||||||||||||    
T  730142 caatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaagtctagtggtattcaaaatcattcaaat 730241  T
Q  118 tttgaaggattgtttaataaattggattttgatggattttgtg 160  Q
    || || | ||||||||||||||  |||||||||||||||||||    
T  730242 ttcgacgaattgtttaataaatcagattttgatggattttgtg 730284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 19 - 161
Target Start/End: Complemental strand, 47654558 - 47654415
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnn-gtcttgtggtattcaaaatcattcaaat 117  Q
    ||||||||| |||||||||||| ||| |||||||| ||||||||||||| | | || || | ||        |||| |||||||||||||| ||||||||    
T  47654558 caatcaagattctttgtcatttaaaagaagtcttgtggtattcaatcaaaactcttaatcacttaaaaaaaagtctagtggtattcaaaattattcaaat 47654459  T
Q  118 tttgaaggattgtttaataaattggattttgatggattttgtgg 161  Q
    || |||||||||||||||||||  ||||||||||||||||||||    
T  47654458 ttcgaaggattgtttaataaatcagattttgatggattttgtgg 47654415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 95 - 161
Target Start/End: Complemental strand, 49198399 - 49198333
Alignment:
Q  95 gtggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttgatggattttgtgg 161  Q
    ||||||||||||||||||||||||| |||||||||||||||||||  ||||||||||||||||||||    
T  49198399 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgg 49198333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 19 - 161
Target Start/End: Original strand, 45535938 - 45536080
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||| | |||||||||||| || ||||| ||| ||||||||||||||| | || ||   ||       |||| ||||||||||||||||||||||||    
T  45535938 caatcaatattctttgtcatttaaacaaagtgttgtggtattcaatcaagactcttaatcgcttaaaaaaagtctagtggtattcaaaatcattcaaatt 45536037  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtgg 161  Q
    | ||| |||||||||||||||  ||||||||||||||||||||    
T  45536038 tcgaaagattgtttaataaatcagattttgatggattttgtgg 45536080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 93 - 161
Target Start/End: Complemental strand, 31572329 - 31572261
Alignment:
Q  93 ttgtggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttgatggattttgtgg 161  Q
    |||||||||||||||||||| |||||| |||||||||||||||||||  ||||||||||||||||||||    
T  31572329 ttgtggtattcaaaatcatttaaatttcgaaggattgtttaataaatcagattttgatggattttgtgg 31572261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 90 - 161
Target Start/End: Original strand, 48524384 - 48524455
Alignment:
Q  90 gtcttgtggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttgatggattttgtgg 161  Q
    |||||||| ||||||||||||||||||||||||| |||||||||||||||  | ||||||||||||||||||    
T  48524384 gtcttgtgatattcaaaatcattcaaattttgaaagattgtttaataaatcagtttttgatggattttgtgg 48524455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 90 - 161
Target Start/End: Original strand, 49418149 - 49418220
Alignment:
Q  90 gtcttgtggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttgatggattttgtgg 161  Q
    |||| |||||||||||||||||||||||||  ||||||||||||||||||  ||||||||||||||||||||    
T  49418149 gtctagtggtattcaaaatcattcaaatttcaaaggattgtttaataaatcagattttgatggattttgtgg 49418220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 90 - 161
Target Start/End: Original strand, 51085860 - 51085931
Alignment:
Q  90 gtcttgtggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttgatggattttgtgg 161  Q
    |||| |||||||||||||| ||||||||||||||||||| || ||||||||||||||||||| |||||||||    
T  51085860 gtctcgtggtattcaaaataattcaaattttgaaggattattaaataaattggattttgatgaattttgtgg 51085931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 19 - 69
Target Start/End: Complemental strand, 8141334 - 8141284
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 69  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8141334 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 8141284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 19 - 161
Target Start/End: Original strand, 47780705 - 47780847
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| | | |||||||| ||||||||| || ||||||||||||||| | || || | ||       |||| ||| |||||||||||||||||| |    
T  47780705 caatcaagattatatgtcatttaaaaaaagtcatgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtgatattcaaaatcattcaaaat 47780804  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtgg 161  Q
    |  ||||||||||||||||||  ||||||||||||||||||||    
T  47780805 taaaaggattgtttaataaatcagattttgatggattttgtgg 47780847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 99 - 157
Target Start/End: Original strand, 29556178 - 29556236
Alignment:
Q  99 tattcaaaatcattcaaattttgaaggattgtttaataaattggattttgatggatttt 157  Q
    ||||||||||||||||||||| ||| |||||||||||||||| ||||||||||||||||    
T  29556178 tattcaaaatcattcaaatttcgaaagattgtttaataaattagattttgatggatttt 29556236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 98 - 171
Target Start/End: Original strand, 955823 - 955896
Alignment:
Q  98 gtattcaaaatcattcaaattttgaaggattgtttaataaattggattttgatggattttgtggtgtaatttta 171  Q
    |||||||||||||||||||||| ||||| |||||||||||||  |||||||||||||||| | ||| |||||||    
T  955823 gtattcaaaatcattcaaatttcgaagggttgtttaataaatcagattttgatggattttctagtgaaatttta 955896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 22183364 - 22183416
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    ||||||||| |||||||||||| |||||||||||| |||||||||||||||||    
T  22183364 caatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagatt 22183416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 19 - 148
Target Start/End: Original strand, 47784381 - 47784509
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||| ||||  | || |||||||||||| ||||||||||||||| | ||  | ||||       ||||||||||||||||||| ||||||| |    
T  47784381 caatcaagactttttgcaagttaaaaaaagtcttgtggtattcaatcaagactctttgtcatttaaaaaa-gtcttgtggtattcaaaattattcaaact 47784479  T
Q  119 ttgaaggattgtttaataaattggattttg 148  Q
    |  || ||||||||||||||||||||||||    
T  47784480 tctaaagattgtttaataaattggattttg 47784509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 112 - 158
Target Start/End: Complemental strand, 43885203 - 43885157
Alignment:
Q  112 tcaaattttgaaggattgtttaataaattggattttgatggattttg 158  Q
    |||||||||||| |||| |||||||||||||||||||||||||||||    
T  43885203 tcaaattttgaatgattatttaataaattggattttgatggattttg 43885157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 93 - 148
Target Start/End: Complemental strand, 31622591 - 31622536
Alignment:
Q  93 ttgtggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttg 148  Q
    |||| ||||||||||||||||||||||  || ||||||||||||||| ||||||||    
T  31622591 ttgttgtattcaaaatcattcaaatttcaaaagattgtttaataaatcggattttg 31622536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 69
Target Start/End: Original strand, 953813 - 953863
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 69  Q
    ||||||||| |||||||||||| |||||||||||| ||||||| |||||||    
T  953813 caatcaagattctttgtcatttaaaaaaagtcttgtggtattcgatcaaga 953863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 28824620 - 28824568
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    ||||||||||||||| | |||| |||||||||||| | |||||||||||||||    
T  28824620 caatcaagactctttctaatttaaaaaaagtcttgtgttattcaatcaagatt 28824568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 49198515 - 49198464
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    ||||||||||||||| ||| ||||||||||||||| | |||||||||||||||    
T  49198515 caatcaagactcttt-tcaatttaaaaaagtcttgtgttattcaatcaagatt 49198464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 19 - 74
Target Start/End: Original strand, 48524271 - 48524326
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagattttt 74  Q
    |||||||||||||||   |||| |||||||||||| | ||||||||||||||||||    
T  48524271 caatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagattttt 48524326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 69
Target Start/End: Complemental strand, 15835301 - 15835251
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 69  Q
    ||||||||||| ||||  |||| |||||||||||| |||||||||||||||    
T  15835301 caatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaaga 15835251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 69
Target Start/End: Complemental strand, 19452098 - 19452048
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 69  Q
    |||||||||||||||   |||| |||||||||||| |||||||||||||||    
T  19452098 caatcaagactctttccaatttaaaaaaagtcttgtggtattcaatcaaga 19452048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 69
Target Start/End: Original strand, 25612109 - 25612159
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 69  Q
    ||||||||||| ||||  |||| |||||||||||| |||||||||||||||    
T  25612109 caatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaaga 25612159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 74
Target Start/End: Original strand, 10896845 - 10896882
Alignment:
Q  37 attttaaaaaagtcttgaggtattcaatcaagattttt 74  Q
    |||||||||||||||| |||||||||||||||| ||||    
T  10896845 attttaaaaaagtctttaggtattcaatcaagactttt 10896882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 115 - 148
Target Start/End: Complemental strand, 17994741 - 17994708
Alignment:
Q  115 aattttgaaggattgtttaataaattggattttg 148  Q
    ||||||||||||||||||||||||||| ||||||    
T  17994741 aattttgaaggattgtttaataaattgtattttg 17994708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 49198474 - 49198429
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaat 64  Q
    ||||||||| |||||||||||| |||||||| ||| ||||||||||    
T  49198474 caatcaagattctttgtcatttaaaaaaagttttgtggtattcaat 49198429  T

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Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 730100 - 730152
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    |||||||||||||||   |||| |||||||||||| | |||||||||||||||    
T  730100 caatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagatt 730152  T

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Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 953771 - 953823
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    |||||||||||||||   |||| |||||||||||| | |||||||||||||||    
T  953771 caatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagatt 953823  T

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Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 38 - 74
Target Start/End: Complemental strand, 1928442 - 1928406
Alignment:
Q  38 ttttaaaaaagtcttgaggtattcaatcaagattttt 74  Q
    ||||||||||||||| |||||||||||||||| ||||    
T  1928442 ttttaaaaaagtctttaggtattcaatcaagactttt 1928406  T

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Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 14494161 - 14494213
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    |||||||||||||||   |||| |||||||||||| | |||||||||||||||    
T  14494161 caatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagatt 14494213  T

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Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 19452056 - 19452004
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    |||||||||||||||   |||| |||||||||||| | |||||||||||||||    
T  19452056 caatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagatt 19452004  T

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Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 28387641 - 28387589
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    ||||||||||| ||||  |||| |||||||||||  |||||||||||||||||    
T  28387641 caatcaagactttttgcaatttaaaaaaagtcttttggtattcaatcaagatt 28387589  T

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Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 35679376 - 35679324
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    |||||||| ||||||   |||| |||||||||||| |||||||||||||||||    
T  35679376 caatcaaggctcttttcaatttaaaaaaagtcttgtggtattcaatcaagatt 35679324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 38 - 74
Target Start/End: Original strand, 36402293 - 36402329
Alignment:
Q  38 ttttaaaaaagtcttgaggtattcaatcaagattttt 74  Q
    ||||||||||||||| |||||||||||||||| ||||    
T  36402293 ttttaaaaaagtctttaggtattcaatcaagactttt 36402329  T

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Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 38 - 74
Target Start/End: Original strand, 52705439 - 52705475
Alignment:
Q  38 ttttaaaaaagtcttgaggtattcaatcaagattttt 74  Q
    ||||| |||||||||| ||||||||||||||||||||    
T  52705439 ttttataaaagtcttgtggtattcaatcaagattttt 52705475  T

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Target: chr4 (Bit Score: 130; Significance: 3e-67; HSPs: 86)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 19 - 201
Target Start/End: Original strand, 23987214 - 23987396
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||| | ||||||| | ||       |||||||||||||||||||||||||||||    
T  23987214 caatcaatactctttgtcattttaaaaaagtcttgaggtattcaatcaaaacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatt 23987313  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtggtgtaattttaacaagaaaaagtctttcatgaaaagatgag 201  Q
    | |||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  23987314 tcgaaggattgtttaataaattagattttgatggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgag 23987396  T

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Target: chr4; HSP #2
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 19 - 201
Target Start/End: Original strand, 50018251 - 50018433
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||| | ||||       |||||||||||||||| ||||||||||||    
T  50018251 caatcaagactctttgtcattttaaaaaagtcttgaggtattccatcaagacttttcttcatttaaaaaaagtcttgtggtattcaagatcattcaaatt 50018350  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtggtgtaattttaacaagaaaaagtctttcatgaaaagatgag 201  Q
    ||||||||||||||||||||||| ||||| ||||||||||| ||||||||||||||||||||||||||||| |||||||||||    
T  50018351 ttgaaggattgtttaataaattgaattttaatggattttgtagtgtaattttaacaagaaaaagtctttcaagaaaagatgag 50018433  T

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Target: chr4; HSP #3
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 19 - 201
Target Start/End: Original strand, 5441404 - 5441596
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||       |||||||||||||||||||||||||||||    
T  5441404 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatt 5441503  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcatgaaaagatgag 201  Q
    | ||||||||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||||||||||||||||    
T  5441504 tcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgag 5441596  T

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Target: chr4; HSP #4
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 19 - 201
Target Start/End: Original strand, 27768056 - 27768248
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||       |||||||||||||||||||||||||||||    
T  27768056 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatt 27768155  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcatgaaaagatgag 201  Q
    | ||||||||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||||||||||||||||    
T  27768156 tcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgag 27768248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 19 - 201
Target Start/End: Original strand, 54341144 - 54341336
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||       |||||||||||||||||||||||||||||    
T  54341144 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatt 54341243  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcatgaaaagatgag 201  Q
    | ||||||||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||||||||||||||||    
T  54341244 tcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgag 54341336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 19 - 201
Target Start/End: Complemental strand, 37828608 - 37828416
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||       |||||||||||||||||||||||||||||    
T  37828608 caatcaagactctttgtcatttttaaaaagtcttgaggtattcaatcaagatttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatt 37828509  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcatgaaaagatgag 201  Q
    | ||||||||||||||||||||||||||||||||||||||||          |||||||||||| ||||||||||||||||||||||||||||    
T  37828508 tcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaaaaagaaaaagtctttcatgaaaagatgag 37828416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 19 - 195
Target Start/End: Complemental strand, 30967505 - 30967329
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| | ||       |||||||||||||||||||||||||||||    
T  30967505 caatcaagactctttgtcattttaaaaaagttttgaggtattcaatcaagatttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatt 30967406  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtggtgtaattttaacaagaaaaagtctttcatgaaaa 195  Q
    |  |||||||||||||||||||||||||||  ||||||||| ||||||||||||||||||||| |||||||||||||    
T  30967405 tcaaaggattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaaatctttcatgaaaa 30967329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 19 - 201
Target Start/End: Original strand, 51320921 - 51321113
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||       |||||||||||||||||||||||||||||    
T  51320921 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatt 51321020  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcatgaaaagatgag 201  Q
    | ||||||||||||||||||||||||||||||||||||||||          ||||||||||||||||||||||| |||||||||||||||||    
T  51321021 tcgaaggattgtttaataaattggattttgatggattttgtgtaattttatagtgtaattttaacaagaaaaagtttttcatgaaaagatgag 51321113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 24 - 193
Target Start/End: Original strand, 12913229 - 12913398
Alignment:
Q  24 aagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaattttgaa 123  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||       ||||  ||||||||||||||||||||||||||||    
T  12913229 aagactctttgtcattttaaaaaagtcttgaggtattcaatcaagctttttcatcatttaaaaaaagtctcatggtattcaaaatcattcaaattttgaa 12913328  T
Q  124 ggattgtttaataaattggattttgatggattttgtggtgtaattttaacaagaaaaagtctttcatgaa 193  Q
    |||||||||||||||||||||||||  ||||||| | ||| ||||||||||||||||||| |||||||||    
T  12913329 ggattgtttaataaattggattttgtgggattttctagtgaaattttaacaagaaaaagtatttcatgaa 12913398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 20 - 201
Target Start/End: Original strand, 32322092 - 32322283
Alignment:
Q  20 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 119  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||       ||||||||||||||||||||||||||||||    
T  32322092 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcatcacttaaaaatagtcttgtggtattcaaaatcattcaaattt 32322191  T
Q  120 tgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcatgaaaagatgag 201  Q
     ||||||||||||||||||||| ||||||||||||||||||          |||||||||||| ||||||| ||||||||| ||||||||||    
T  32322192 cgaaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaataagaaaatgtctttcataaaaagatgag 32322283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 19 - 190
Target Start/End: Complemental strand, 49501717 - 49501546
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    |||||||||||||||||||||||||| || ||||||||||||||||||||| ||||||| | ||       ||||||||| |||||||||||||||||||    
T  49501717 caatcaagactctttgtcattttaaataaatcttgaggtattcaatcaagacttttcatcacttaaaaaatgtcttgtggcattcaaaatcattcaaatt 49501618  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtggtgtaattttaacaagaaaaagtctttcat 190  Q
    | ||| ||||||||||||||||||||||||  | ||||||| ||||||||||||||||||||||||||||||    
T  49501617 tcgaatgattgtttaataaattggattttgtggaattttgtagtgtaattttaacaagaaaaagtctttcat 49501546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 19 - 190
Target Start/End: Complemental strand, 49507782 - 49507611
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    |||||||||||||||||||||||||| || ||||||||||||||||||||| ||||||| | ||       ||||||||| |||||||||||||||||||    
T  49507782 caatcaagactctttgtcattttaaataaatcttgaggtattcaatcaagacttttcatcacttaaaaaatgtcttgtggcattcaaaatcattcaaatt 49507683  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtggtgtaattttaacaagaaaaagtctttcat 190  Q
    | ||| ||||||||||||||||||||||||  | ||||||| ||||||||||||||||||||||||||||||    
T  49507682 tcgaatgattgtttaataaattggattttgtggaattttgtagtgtaattttaacaagaaaaagtctttcat 49507611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 19 - 198
Target Start/End: Original strand, 37915827 - 37916016
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||| | ||||||||||||||||||||||||||||||||||| ||||||| | ||       |||||||||||||||||||||||||||||    
T  37915827 caatcaagactctctatcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatt 37915926  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcatgaaaagat 198  Q
    | ||||||||||||||||||||||||||||||||||||||||          ||||| |||||||||||||||||| |||||||||||||    
T  37915927 tcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtacttttaacaagaaaaagtcattcatgaaaagat 37916016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 19 - 201
Target Start/End: Complemental strand, 54853674 - 54853482
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||| |||||||||||||||||||| |||||||||||||| ||||||| | ||       ||||||||||||||||||| |||||||||    
T  54853674 caatcaagactctttttcattttaaaaaagtcttgaagtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaattattcaaatt 54853575  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcatgaaaagatgag 201  Q
    |  |||||||||||||||||||||||||||||||||||||||          ||||||||||||||||||||| |||||||||||||||||||    
T  54853574 tcaaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaaatctttcatgaaaagatgag 54853482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 19 - 201
Target Start/End: Complemental strand, 36479437 - 36479256
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||| | ||       |||| |||||||||||||| |||||||||    
T  36479437 caatcaaaactctttgtcattttaaaaaagtcttgaggtattcaattaagatttttcatcacttaaaaaaagtctcgtggtattcaaaattattcaaatt 36479338  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtggtgtaattttaacaagaaaaagtctttcatgaaaagatgag 201  Q
    | |||||||| |||||||||||||||||||||||||||| | ||| ||||||| ||| ||||||||||| ||||||| |||||    
T  36479337 tcgaaggattatttaataaattggattttgatggatttt-tagtgaaattttagcaaaaaaaagtcttttatgaaaacatgag 36479256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 27 - 162
Target Start/End: Complemental strand, 29649865 - 29649730
Alignment:
Q  27 actctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaattttgaagga 126  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||       |||||||||||||||||||||||||||||| ||| ||    
T  29649865 actctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaaga 29649766  T
Q  127 ttgtttaataaattggattttgatggattttgtggt 162  Q
    ||||||||||||||||||||||||||||||||||||    
T  29649765 ttgtttaataaattggattttgatggattttgtggt 29649730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 19 - 201
Target Start/End: Complemental strand, 32684193 - 32684022
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    |||| |||| ||||||||||||||||||||| ||||||||||||||||||| ||||||| ||||       |||||||||||||||||||||||||||||    
T  32684193 caattaagattctttgtcattttaaaaaagtattgaggtattcaatcaagacttttcatcatttaaaaaa-gtcttgtggtattcaaaatcattcaaatt 32684095  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtggtgtaattttaacaagaaaaagtctttcatgaaaagatgag 201  Q
    | ||||||||||||||||||||||||          ||||| |||||||||||||||||||||||||||||||||||||||||    
T  32684094 tcgaaggattgtttaataaattggat----------tttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgag 32684022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 19 - 201
Target Start/End: Complemental strand, 49835019 - 49834847
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||| |||| |||||||||||||||||||| ||||||| | ||       |||||||||||||||||||||||||||||    
T  49835019 caatcaagactctttgtcattttaacaaaggcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatt 49834920  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtggtgtaattttaacaagaaaaagtctttcatgaaaagatgag 201  Q
    | ||||||||||||||||||||||||          ||||| |||||||||||||||||| ||||||||||| ||||||||||    
T  49834919 tcgaaggattgtttaataaattggat----------tttgtagtgtaattttaacaagaagaagtctttcattaaaagatgag 49834847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 43 - 197
Target Start/End: Original strand, 28483923 - 28484076
Alignment:
Q  43 aaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaattttgaaggattgtttaataaattgg 142  Q
    ||||||||||||||||||||||||||| ||||||| | ||       |||| ||||||||||||||||||||||||| |||||||| |||||||||||||    
T  28483923 aaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtctcgtggtattcaaaatcattcaaatttcgaaggattatttaataaattgg 28484022  T
Q  143 attttgatggattttgtggtgtaattttaacaagaaaaagtctttcatgaaaaga 197  Q
    ||||||  ||||||||| |||||| ||||||||||||||||||||||||||||||    
T  28484023 attttgtaggattttgtagtgtaa-tttaacaagaaaaagtctttcatgaaaaga 28484076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 19 - 161
Target Start/End: Complemental strand, 44771060 - 44770917
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggta-ttcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaat 117  Q
    ||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| | ||        |||  ||||||||||||||||||||||    
T  44771060 caatcaagactctttgtcattttaaaaaaatcttgaggtaattcaatcaagatttttcatcacttaaaaaaaatctcatggtattcaaaatcattcaaat 44770961  T
Q  118 tttgaaggattgtttaataaattggattttgatggattttgtgg 161  Q
    ||||||||||||||||||||||||||||||| ||||||||||||    
T  44770960 tttgaaggattgtttaataaattggattttggtggattttgtgg 44770917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 19 - 161
Target Start/End: Original strand, 9163076 - 9163218
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    |||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||| |  |       |||||||| ||||||||||||||||||||    
T  9163076 caatcaagactctttgtcatttaaaaaaagtcttgtggtattcaatcaagatttttcatcacataaaaaaagtcttgtgatattcaaaatcattcaaatt 9163175  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtgg 161  Q
    | ||||||||||||||||||||  |||||||||||||||||||    
T  9163176 tcgaaggattgtttaataaattaaattttgatggattttgtgg 9163218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 19 - 201
Target Start/End: Original strand, 41725125 - 41725314
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||| |||||||||||||||||||||||||||| |||| ||||||||| ||||||| |  |       |||||||| ||||||||||||||||||||    
T  41725125 caatcaatactctttgtcattttaaaaaagtcttgatgtatgcaatcaagacttttcatcacctaaaaaaagtcttgtgatattcaaaatcattcaaatt 41725224  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcatgaaaagatgag 201  Q
    |||||||||||||   ||||||||||||||||| ||||||||          ||||||||||||||||||||| |||||||||||||||||||    
T  41725225 ttgaaggattgtt---taaattggattttgatgaattttgtgggattttatagtgtaattttaacaagaaaaaatctttcatgaaaagatgag 41725314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 19 - 198
Target Start/End: Original strand, 5799977 - 5800157
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnn-gtcttgtggtattcaaaatcattcaaat 117  Q
    |||||||||||||||||||||||||||||   |||| |||||  ||||| | ||||||| | ||        ||||||||||||||||||||||||||||    
T  5799977 caatcaagactctttgtcattttaaaaaaaatttgatgtatttcatcaaaacttttcatcacttaaaaaaaagtcttgtggtattcaaaatcattcaaat 5800076  T
Q  118 tttgaaggattgtttaataaattggattttgatggattttgtggtgtaattttaacaagaaaaagtctttcatgaaaagat 198  Q
    ||  |||||||||||||||||||||||||||   |||||||| | ||||||||||||||||||||||||| ||||||||||    
T  5800077 ttcaaaggattgtttaataaattggattttgtgagattttgtagagtaattttaacaagaaaaagtctttaatgaaaagat 5800157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 90 - 201
Target Start/End: Original strand, 48261198 - 48261319
Alignment:
Q  90 gtcttgtggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaa 179  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||          |||||||||||||||||||    
T  48261198 gtcttgtggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 48261297  T
Q  180 aagtctttcatgaaaagatgag 201  Q
    || ||||||||||||| |||||    
T  48261298 aaatctttcatgaaaatatgag 48261319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 19 - 201
Target Start/End: Complemental strand, 40537351 - 40537174
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    |||||||||||||||||||||| |||||||||||| ||||||||||||| | | || || | ||           ||||||||||||||||||| |||||    
T  40537351 caatcaagactctttgtcatttaaaaaaagtcttgtggtattcaatcaaaactcttaatcacttaaaaaa-----tgtggtattcaaaatcatttaaatt 40537257  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtggtgtaattttaacaagaaaaagtctttcatgaaaagatgag 201  Q
    | ||| |||||||||||||||  |||||||||||||||||||||| ||||||| || |||||||||||||||||||| |||||    
T  40537256 tcgaatgattgtttaataaatctgattttgatggattttgtggtgaaattttagcatgaaaaagtctttcatgaaaacatgag 40537174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 19 - 161
Target Start/End: Complemental strand, 19741114 - 19740972
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| ||||||||||||  |||||||| || |||||||| |||||| |||| || | ||       ||||||||||||| |||||||||||||||    
T  19741114 caatcaagattctttgtcatttataaaaagtcatgtggtattcagtcaagacttttaatcacttaaaaaaagtcttgtggtattaaaaatcattcaaatt 19741015  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtgg 161  Q
    | |||||||||||||||||||| ||||||||||||||||||||    
T  19741014 tcgaaggattgtttaataaattagattttgatggattttgtgg 19740972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 19 - 161
Target Start/End: Original strand, 55302843 - 55302985
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| |||||||||||||||||||||| || ||||||||||||||| | || || | ||       |||| ||||||||||||||||||||||||    
T  55302843 caatcaagattctttgtcattttaaaaaagtcatgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatt 55302942  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtgg 161  Q
    | |||||||||||||||||||  ||||||||||||| ||||||    
T  55302943 tcgaaggattgtttaataaatcagattttgatggatattgtgg 55302985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 19 - 161
Target Start/End: Original strand, 1112893 - 1113035
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| |||||||||||| |||||||||||| ||||||||||||||| | || || | ||       |||| ||||||||||||||||||||||||    
T  1112893 caatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatt 1112992  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtgg 161  Q
    |  || |||||||||||||||  ||||||||||||||||||||    
T  1112993 tcaaatgattgtttaataaatcagattttgatggattttgtgg 1113035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 19 - 161
Target Start/End: Original strand, 25331131 - 25331273
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| |||||||||||| |||||||||||| ||||||||||||||| | || || | ||       |||| ||| ||||||||||||||||||||    
T  25331131 caatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtgatattcaaaatcattcaaatt 25331230  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtgg 161  Q
    |  ||||||||||||||||||  ||||||||||||||||||||    
T  25331231 tcaaaggattgtttaataaatcagattttgatggattttgtgg 25331273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 19 - 161
Target Start/End: Original strand, 28370924 - 28371066
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||| |||||||||| |||||||||||||||||| ||||||||||| | |||| || | ||       ||||  |||||||||||||||||||||||    
T  28370924 caatcaaaactctttgtcgttttaaaaaagtcttgagatattcaatcaaaactttttatcacttaaataaagtctcatggtattcaaaatcattcaaatt 28371023  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtgg 161  Q
    || |||||||||||||||||||| |||||| || |||||||||    
T  28371024 ttaaaggattgtttaataaattgaattttggtgaattttgtgg 28371066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 19 - 161
Target Start/End: Original strand, 28541698 - 28541840
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| |||||||||||| |||||||||| | ||||||||||||||| | || || | ||       |||| ||||||||||||||||||||||||    
T  28541698 caatcaagattctttgtcatttaaaaaaagtctcgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatt 28541797  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtgg 161  Q
    | ||| |||||||||||||||  ||||||||||||||||||||    
T  28541798 tcgaatgattgtttaataaatcagattttgatggattttgtgg 28541840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 20 - 201
Target Start/End: Complemental strand, 31314933 - 31314756
Alignment:
Q  20 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 119  Q
    |||||||| |||||||||||| |||||||||||| |||||    |||||| | || || | ||       |||| |||||||||||||||||||||||||    
T  31314933 aatcaagattctttgtcatttaaaaaaagtcttgtggtat----tcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaattt 31314838  T
Q  120 tgaaggattgtttaataaattggattttgatggattttgtggtgtaattttaacaagaaaaagtctttcatgaaaagatgag 201  Q
     |||||||||||||||||||  |||||||  ||||||| | ||| ||||||| || |||||||||||||||||||| |||||    
T  31314837 cgaaggattgtttaataaatcagattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgag 31314756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 19 - 161
Target Start/End: Complemental strand, 41881289 - 41881146
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnn-gtcttgtggtattcaaaatcattcaaat 117  Q
    ||||||||| |||||||||||| |||||||||||| ||||||||||||||| | || || | ||        || | |||||||||||||||||||||||    
T  41881289 caatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaagtttagtggtattcaaaatcattcaaat 41881190  T
Q  118 tttgaaggattgtttaataaattggattttgatggattttgtgg 161  Q
    || |||||||||||||||||||  ||||||||||||||||||||    
T  41881189 ttcgaaggattgtttaataaatcagattttgatggattttgtgg 41881146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 19 - 161
Target Start/End: Original strand, 7007374 - 7007516
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| ||| |||||||| ||||||||| || ||||||||||||||| | || || | ||       |||| ||||||||||||||||||||||||    
T  7007374 caatcaagattctctgtcatttaaaaaaagtcatgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatt 7007473  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtgg 161  Q
    | |||||||||||||||||||  |||||||||| |||||||||    
T  7007474 tcgaaggattgtttaataaatcagattttgatgaattttgtgg 7007516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 19 - 161
Target Start/End: Original strand, 12112945 - 12113087
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| |||||||||||| |||||||||||| ||||||||||||| | | || || | ||       ||||  |||||||||||||||||||||||    
T  12112945 caatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaaaactcttaatcacttaaaaaaagtctaatggtattcaaaatcattcaaatt 12113044  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtgg 161  Q
    | |||||||||||||||||||  |||||| |||||||||||||    
T  12113045 tcgaaggattgtttaataaatcagattttaatggattttgtgg 12113087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 19 - 161
Target Start/End: Complemental strand, 32951042 - 32950900
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| | |||||||||| ||||||||| || ||||||||||||||| | || || | ||       |||| ||||||||||||||||||||||||    
T  32951042 caatcaagattatttgtcatttaaaaaaagtcatgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatt 32950943  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtgg 161  Q
    | |||||||||||||||||||  |||||||||| |||||||||    
T  32950942 tcgaaggattgtttaataaatcagattttgatgaattttgtgg 32950900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 19 - 161
Target Start/End: Complemental strand, 39307459 - 39307317
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| | |||| |||||||||||||||||| ||||||||||||||||| ||||| ||||       ||||||||||||||| |||||||||||||    
T  39307459 caatcaagattttttgccattttaaaaaagtcttgtggtattcaatcaagattcttcatcatttaaaaaaagtcttgtggtattcataatcattcaaatt 39307360  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtgg 161  Q
    |  || |||| |||||| |||||  |||||||| |||||||||    
T  39307359 tctaaagattatttaatgaattgagttttgatgaattttgtgg 39307317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 19 - 201
Target Start/End: Complemental strand, 46635848 - 46635662
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| |||||||||||| |||||||||||| ||||||||||||||| | || || | ||       || | || |||||||||||||||||||||    
T  46635848 caatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtttagtagtattcaaaatcattcaaatt 46635749  T
Q  119 ttgaaggattgtttaataaat----tggattttgatggattttgtggtgtaattttaacaagaaaaagtctttcatgaaaagatgag 201  Q
    | |||||||||||||||||||    | |||||||  ||||||| | ||| ||||||| || ||||||||||||||| |||| |||||    
T  46635748 tcgaaggattgtttaataaataagattgattttgtgggattttttagtgaaattttagcatgaaaaagtctttcataaaaacatgag 46635662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 19 - 159
Target Start/End: Complemental strand, 34228789 - 34228649
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| |||||||||||| ||||||||| || ||||||||||||| ||| || || | ||       |||| |||||||||||||||||| |||||    
T  34228789 caatcaagattctttgtcatttaaaaaaagtcatgtggtattcaatcaaaattcttaatcacttaaaaaaagtctagtggtattcaaaatcattgaaatt 34228690  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgt 159  Q
    | ||| |||||||||||||||  ||||||||||||||||||    
T  34228689 tcgaatgattgtttaataaatcagattttgatggattttgt 34228649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 96 - 190
Target Start/End: Complemental strand, 56445474 - 56445380
Alignment:
Q  96 tggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttgatggattttgtggtgtaattttaacaagaaaaagtctttcat 190  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||||||||||  ||||||| | ||| || |||| ||||||||||||||||||    
T  56445474 tggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgtgggattttctagtgaaactttagcaagaaaaagtctttcat 56445380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 19 - 161
Target Start/End: Original strand, 22202015 - 22202157
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| |||||||||||| |||||||||||| ||||||||||||||| | || || | ||       |||| |||||||||||||||||| |||||    
T  22202015 caatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattaaaatt 22202114  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtgg 161  Q
    |  || |||||||||||||||   |||||||||||||||||||    
T  22202115 tcaaaagattgtttaataaataaaattttgatggattttgtgg 22202157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 31 - 161
Target Start/End: Original strand, 25446062 - 25446192
Alignment:
Q  31 tttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaattttgaaggattgt 130  Q
    |||||||||| |||||| ||||| ||||||||||||||| | || || | ||       |||| ||||||||||||||||||||||||| ||| ||||||    
T  25446062 tttgtcatttaaaaaaattcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaatgattgt 25446161  T
Q  131 ttaataaattggattttgatggattttgtgg 161  Q
    |||||||||  ||||||||||||||||||||    
T  25446162 ttaataaatcagattttgatggattttgtgg 25446192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 43 - 161
Target Start/End: Original strand, 42786708 - 42786826
Alignment:
Q  43 aaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaattttgaaggattgtttaataaattgg 142  Q
    ||||||||||| ||||||||||||||| | || || ||||       |||| ||||||||||||||||||||||||| |||||||||||||||||||       
T  42786708 aaaaagtcttgtggtattcaatcaagactcttaatcatttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcat 42786807  T
Q  143 attttgatggattttgtgg 161  Q
    |||||||||||||||||||    
T  42786808 attttgatggattttgtgg 42786826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 19 - 161
Target Start/End: Complemental strand, 39479563 - 39479419
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnn--gtcttgtggtattcaaaatcattcaaa 116  Q
    ||||||||| || ||||||||| |||||||||||| ||||||||||||||| | || || | ||         | |||||||||||||||||||||||||    
T  39479563 caatcaagattccttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaaagacttgtggtattcaaaatcattcaaa 39479464  T
Q  117 ttttgaaggattgtttaataaattggattttgatggattttgtgg 161  Q
    ||| |||| ||||||||||||||  ||||||||||||||||||||    
T  39479463 tttcgaagaattgtttaataaatcagattttgatggattttgtgg 39479419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 31 - 160
Target Start/End: Original strand, 53275851 - 53275980
Alignment:
Q  31 tttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaattttgaaggattgt 130  Q
    |||||||||| ||||||||||||  ||||||||||||||||||| || | ||       |||| ||| |||| |||||||||||||||| ||||||||||    
T  53275851 tttgtcatttaaaaaaagtcttgtagtattcaatcaagatttttaatcacttaaaaaaagtctagtgatatttaaaatcattcaaatttcgaaggattgt 53275950  T
Q  131 ttaataaattggattttgatggattttgtg 160  Q
     ||||||||  |||||||||||||||||||    
T  53275951 gtaataaatcagattttgatggattttgtg 53275980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 90 - 161
Target Start/End: Complemental strand, 7249900 - 7249829
Alignment:
Q  90 gtcttgtggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttgatggattttgtgg 161  Q
    |||| ||||||||||||||||||||||||| |||||||||||||||||||  ||||||||||||||||||||    
T  7249900 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgg 7249829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 90 - 161
Target Start/End: Original strand, 41320881 - 41320952
Alignment:
Q  90 gtcttgtggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttgatggattttgtgg 161  Q
    |||| ||||||||||||||||||||||||| |||||||||||||||||||  ||||||||||||||||||||    
T  41320881 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgg 41320952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 19 - 161
Target Start/End: Original strand, 1044809 - 1044949
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| || |||||||||  ||||||||||| ||||||||||||||| | || || | ||       |||| ||||||||||||| ||||||| ||    
T  1044809 caatcaagattccttgtcattt--aaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaaccattcaactt 1044906  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtgg 161  Q
    | |||||||||||||||||||  ||||||||||||||||||||    
T  1044907 tcgaaggattgtttaataaatcagattttgatggattttgtgg 1044949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 19 - 161
Target Start/End: Complemental strand, 37046658 - 37046515
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnn-gtcttgtggtattcaaaatcattcaaat 117  Q
    ||||||||| |||||||||||| |||||||| ||| ||||||||||||||| | || || | ||        |||| ||| |||| ||||||||||||||    
T  37046658 caatcaagattctttgtcatttaaaaaaagttttgtggtattcaatcaagactcttaatcacttaaaaaaaagtctagtgatatttaaaatcattcaaat 37046559  T
Q  118 tttgaaggattgtttaataaattggattttgatggattttgtgg 161  Q
    || |||||||||||||||||||  ||||||||||||||||||||    
T  37046558 ttcgaaggattgtttaataaatcagattttgatggattttgtgg 37046515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 20 - 161
Target Start/End: Complemental strand, 30009882 - 30009741
Alignment:
Q  20 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 119  Q
    |||||| | ||||| |||||| ||||||||| || ||||||||||||||| | || || | ||       |||| |||||||||||||||||| ||||||    
T  30009882 aatcaaaattctttatcatttaaaaaaagtcctgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcatttaaattt 30009783  T
Q  120 tgaaggattgtttaataaattggattttgatggattttgtgg 161  Q
    | || |||||||||||||||  ||||||||||||||||||||    
T  30009782 taaatgattgtttaataaatcagattttgatggattttgtgg 30009741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 99 - 161
Target Start/End: Complemental strand, 25504765 - 25504703
Alignment:
Q  99 tattcaaaatcattcaaattttgaaggattgtttaataaattggattttgatggattttgtgg 161  Q
    ||||||||||||||||||||| |||||||||||||||||||  ||||||||||||||||||||    
T  25504765 tattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgg 25504703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 96 - 161
Target Start/End: Original strand, 3436670 - 3436735
Alignment:
Q  96 tggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttgatggattttgtgg 161  Q
    |||||||||||||||||||||||| |||||||||||||||||||  |||||||||| |||||||||    
T  3436670 tggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatgaattttgtgg 3436735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 19 - 161
Target Start/End: Original strand, 23464955 - 23465097
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| || ||||||||| |||||||| |||   ||||||||||||| | || || | ||       |||| ||||||||||||| ||||||||||    
T  23464955 caatcaagattccttgtcatttaaaaaaagttttgtaatattcaatcaagactcttaatcacttaaaataagtctagtggtattcaaaaccattcaaatt 23465054  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtgg 161  Q
    | |||||||||||||||||||  || |||||||||||||||||    
T  23465055 tcgaaggattgtttaataaatcagaatttgatggattttgtgg 23465097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 95 - 161
Target Start/End: Complemental strand, 27454208 - 27454142
Alignment:
Q  95 gtggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttgatggattttgtgg 161  Q
    ||||||||||||||||||||||||||||| |||| ||||||||||  |||||||||| |||||||||    
T  27454208 gtggtattcaaaatcattcaaattttgaaagattatttaataaatcagattttgatgaattttgtgg 27454142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 19 - 77
Target Start/End: Original strand, 20021344 - 20021402
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcat 77  Q
    ||||||||| ||||||||||||||||||| |||||| |||||||||||||| |||||||    
T  20021344 caatcaagattctttgtcattttaaaaaaatcttgaagtattcaatcaagacttttcat 20021402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 22 - 145
Target Start/End: Complemental strand, 41581991 - 41581868
Alignment:
Q  22 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaattttg 121  Q
    |||||||  ||||||||||||||||||||||| |||||||| | |||| ||||| | | ||       |||| |||||||| | | ||||||||||||||    
T  41581991 tcaagacattttgtcattttaaaaaagtcttgtggtattcagttaagaattttcttaacttaaaaaaagtctcgtggtatttagagtcattcaaattttg 41581892  T
Q  122 aaggattgtttaataaattggatt 145  Q
    ||  ||||||||||||||||||||    
T  41581891 aataattgtttaataaattggatt 41581868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 19 - 69
Target Start/End: Complemental strand, 24131178 - 24131128
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 69  Q
    ||||||||| |||||||||||| |||||||||||| |||||||||||||||    
T  24131178 caatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaaga 24131128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 110 - 157
Target Start/End: Original strand, 20021424 - 20021471
Alignment:
Q  110 attcaaattttgaaggattgtttaataaattggattttgatggatttt 157  Q
    ||||||||||| ||||||||||||||||||| ||||||| ||||||||    
T  20021424 attcaaattttaaaggattgtttaataaattagattttgctggatttt 20021471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 110 - 161
Target Start/End: Complemental strand, 24131097 - 24131046
Alignment:
Q  110 attcaaattttgaaggattgtttaataaattggattttgatggattttgtgg 161  Q
    |||||||||| ||| |||||||||||||||  ||||||||||||||||||||    
T  24131097 attcaaatttcgaatgattgtttaataaatcagattttgatggattttgtgg 24131046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 66
Target Start/End: Original strand, 29855682 - 29855728
Alignment:
Q  20 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatca 66  Q
    |||||||||| ||||||||||||||||| | ||||||||||||||||    
T  29855682 aatcaagactgtttgtcattttaaaaaaattttgaggtattcaatca 29855728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 69
Target Start/End: Original strand, 37915785 - 37915835
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 69  Q
    ||||||||||| ||||||| || |||||||||||| |||||||||||||||    
T  37915785 caatcaagactttttgtcacttaaaaaaagtcttgtggtattcaatcaaga 37915835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 131 - 201
Target Start/End: Original strand, 24736447 - 24736527
Alignment:
Q  131 ttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcatgaaaagatgag 201  Q
    ||||||||||||||||||||||||||||||          ||| |||||||||||||| |||||||||||||||| |||||    
T  24736447 ttaataaattggattttgatggattttgtgagattttctagtgaaattttaacaagaagaagtctttcatgaaaacatgag 24736527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 41881331 - 41881279
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    |||||||||||||||   ||||||||||||||||| | |||||||||||||||    
T  41881331 caatcaagactctttccaattttaaaaaagtcttgtgttattcaatcaagatt 41881279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 20 - 71
Target Start/End: Original strand, 20021303 - 20021354
Alignment:
Q  20 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    |||||||||||||||  |||| |||||||| ||| |||||||||||||||||    
T  20021303 aatcaagactctttgcaatttaaaaaaagttttgtggtattcaatcaagatt 20021354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 19 - 74
Target Start/End: Original strand, 37915743 - 37915798
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagattttt 74  Q
    ||||||||||| ||||| | || |||||||||||| ||||||||||||||| ||||    
T  37915743 caatcaagactttttgtaacttaaaaaaagtcttgtggtattcaatcaagactttt 37915798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 69
Target Start/End: Original strand, 5441362 - 5441412
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 69  Q
    ||||||||||| ||||  |||| |||||||||||| |||||||||||||||    
T  5441362 caatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaaga 5441412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 131 - 161
Target Start/End: Original strand, 8711978 - 8712008
Alignment:
Q  131 ttaataaattggattttgatggattttgtgg 161  Q
    |||||||||||||||||||||||||||||||    
T  8711978 ttaataaattggattttgatggattttgtgg 8712008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 77
Target Start/End: Original strand, 11090349 - 11090407
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcat 77  Q
    ||||||||| |||||| || || |||||||| ||| ||||||||||||||| |||||||    
T  11090349 caatcaagaatctttgccacttaaaaaaagttttgtggtattcaatcaagacttttcat 11090407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 69
Target Start/End: Complemental strand, 30967547 - 30967497
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 69  Q
    ||||||||||| ||||  |||| |||||||||||| |||||||||||||||    
T  30967547 caatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaaga 30967497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 74
Target Start/End: Complemental strand, 8584044 - 8584007
Alignment:
Q  37 attttaaaaaagtcttgaggtattcaatcaagattttt 74  Q
    |||||| |||||||||| ||||||||||||||||||||    
T  8584044 attttataaaagtcttgtggtattcaatcaagattttt 8584007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 201
Target Start/End: Original strand, 8711997 - 8712058
Alignment:
Q  140 tggattttgatggattttgtggtgtaattttaacaagaaaaagtctttcatgaaaagatgag 201  Q
    |||||||||  ||||||| | ||| ||||||| |||||||||||||||||| |||| |||||    
T  8711997 tggattttgtgggattttatagtgaaattttagcaagaaaaagtctttcatcaaaacatgag 8712058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 1044768 - 1044819
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    |||||||||||||||  || ||||||||||||||| | |||||||||||||||    
T  1044768 caatcaagactctttc-caatttaaaaaagtcttgtgttattcaatcaagatt 1044819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 165 - 201
Target Start/End: Original strand, 1113049 - 1113085
Alignment:
Q  165 aattttaacaagaaaaagtctttcatgaaaagatgag 201  Q
    |||||||||| |||||||||||||||||||| |||||    
T  1113049 aattttaacatgaaaaagtctttcatgaaaacatgag 1113085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 19741156 - 19741104
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    |||||||||||||||   |||| |||||||||||| | |||||||||||||||    
T  19741156 caatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagatt 19741104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 22201973 - 22202025
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    |||||||||||||||   |||| |||||||||||| | |||||||||||||||    
T  22201973 caatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagatt 22202025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 24131220 - 24131168
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    |||||||||||||||   |||| |||||||||||| | |||||||||||||||    
T  24131220 caatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagatt 24131168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 25331089 - 25331141
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    |||||||||||||||   |||| |||||||||||| | |||||||||||||||    
T  25331089 caatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagatt 25331141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 25504887 - 25504835
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    |||||||||||||||   |||| |||||||||||| | |||||||||||||||    
T  25504887 caatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagatt 25504835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 28541656 - 28541708
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    |||||||||||||||   |||| |||||||||||| | |||||||||||||||    
T  28541656 caatcaagactcttttcaatttaaaaaaagtcttgtgttattcaatcaagatt 28541708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 32951084 - 32951032
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    |||||||||||||||   |||| |||||||||||| | |||||||||||||||    
T  32951084 caatcaagactcttttcaatttaaaaaaagtcttgtgttattcaatcaagatt 32951032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 37046700 - 37046648
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    |||||||||||||||   |||| |||||||||||| | |||||||||||||||    
T  37046700 caatcaagactcttttcaatttaaaaaaagtcttgtgttattcaatcaagatt 37046648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 39479605 - 39479553
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    |||||||||||||||   |||| |||||||||||| | |||||||||||||||    
T  39479605 caatcaagactcttttcaatttaaaaaaagtcttgtgttattcaatcaagatt 39479553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 38 - 74
Target Start/End: Original strand, 40143822 - 40143858
Alignment:
Q  38 ttttaaaaaagtcttgaggtattcaatcaagattttt 74  Q
    ||||||||||||||| |||||||||||||||| ||||    
T  40143822 ttttaaaaaagtctttaggtattcaatcaagactttt 40143858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 29 - 69
Target Start/End: Original strand, 41320788 - 41320828
Alignment:
Q  29 tctttgtcattttaaaaaagtcttgaggtattcaatcaaga 69  Q
    ||||| |||||| |||||||||||| |||||||||||||||    
T  41320788 tctttatcatttaaaaaaagtcttgtggtattcaatcaaga 41320828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 38 - 74
Target Start/End: Original strand, 44929923 - 44929959
Alignment:
Q  38 ttttaaaaaagtcttgaggtattcaatcaagattttt 74  Q
    ||||| |||||||||| ||||||||||||||||||||    
T  44929923 ttttataaaagtcttgtggtattcaatcaagattttt 44929959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 38 - 74
Target Start/End: Original strand, 54509760 - 54509796
Alignment:
Q  38 ttttaaaaaagtcttgaggtattcaatcaagattttt 74  Q
    ||||||||||||||| |||||||||||||||| ||||    
T  54509760 ttttaaaaaagtctttaggtattcaatcaagactttt 54509796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 121; Significance: 6e-62; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 19 - 201
Target Start/End: Original strand, 31895696 - 31895888
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||| ||||       |||||||||||||||||||||||||||||    
T  31895696 caatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatt 31895795  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcatgaaaagatgag 201  Q
    | ||||||||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||||||||||||||||    
T  31895796 tcgaaggattgtttaataaattggattttgatggattttgtgggattttctagtgtaattttaacaagaaaaagtctttcatgaaaagatgag 31895888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 19 - 201
Target Start/End: Original strand, 34773409 - 34773601
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||        ||||||||||||||||||||||||||||    
T  34773409 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaaatcttgtggtattcaaaatcattcaaatt 34773508  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcatgaaaagatgag 201  Q
    | ||||||||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||||||||||||||||    
T  34773509 tcgaaggattgtttaataaattggattttgatggattttgtgggattttgcagtgtaattttaacaagaaaaagtctttcatgaaaagatgag 34773601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 19 - 199
Target Start/End: Complemental strand, 14262638 - 14262448
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||       ||||||||||||||||||||||| |||||    
T  14262638 caatcaagactctttgtcatttttaaaaagtcttgaggtattcaatcaagatttttcatcatttaaaaaaagtcttgtggtattcaaaatcatttaaatt 14262539  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcatgaaaagatg 199  Q
    | ||||||||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||||||||||||||    
T  14262538 tcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatg 14262448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 19 - 201
Target Start/End: Complemental strand, 30385262 - 30385082
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||| | ||||||| | ||       |||||||||||||||||||||||||||||    
T  30385262 caatcaagactctttgtcattttaaaaaagtattgaggtattcaatcaaaaattttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatt 30385163  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtggtgtaattttaacaagaaaaagtctttcatgaaaagatgag 201  Q
    | ||||||||||||||||||||||||||||  ||||||||| ||||||||||||||  | |||||||||||||||||||||||    
T  30385162 tcgaaggattgtttaataaattggattttgtgggattttgtagtgtaattttaaca--acaaagtctttcatgaaaagatgag 30385082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 19 - 201
Target Start/End: Complemental strand, 34759256 - 34759063
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaa-gtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaat 117  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||||||||| ||||||| | ||       ||||||||||||||||||||||||||||    
T  34759256 caatcaagactctttgtcattttaaaaaaagtcttgaagtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaat 34759157  T
Q  118 tttgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcatgaaaagatgag 201  Q
    ||  |||||||||||||||||||||||||||||||||||||||          ||||||||||||||||||||| |||||||||||||||||||    
T  34759156 ttccaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaaatctttcatgaaaagatgag 34759063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 42 - 201
Target Start/End: Original strand, 7497099 - 7497267
Alignment:
Q  42 aaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaattttgaaggattgtttaataaattg 141  Q
    |||||||||||| ||||||||||||||||||||||| | ||       |||||||||||||||||||||||||||||| |||||| ||||||||||||||    
T  7497099 aaaaaagtcttgtggtattcaatcaagatttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggagtgtttaataaattg 7497198  T
Q  142 gattttgatggattttgtg---------gtgtaattttaacaagaaaaagtctttcatgaaaagatgag 201  Q
    |||||||||||||||||||         |||||||||||||||||||||||||||||||||||||||||    
T  7497199 gattttgatggattttgtggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgag 7497267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 93 - 201
Target Start/End: Original strand, 31067567 - 31067675
Alignment:
Q  93 ttgtggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttgatggattttgtggtgtaattttaacaagaaaaagtctttcatga 192  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||  ||||||||| |||||||||||||||||||||||||||||| |    
T  31067567 ttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcataa 31067666  T
Q  193 aaagatgag 201  Q
    |||||||||    
T  31067667 aaagatgag 31067675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 110 - 201
Target Start/End: Complemental strand, 4200541 - 4200450
Alignment:
Q  110 attcaaattttgaaggattgtttaataaattggattttgatggattttgtggtgtaattttaacaagaaaaagtctttcatgaaaagatgag 201  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  4200541 attcaaatttcgaaggattgtttaataaattggattttgatggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgag 4200450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 19 - 161
Target Start/End: Complemental strand, 6197683 - 6197541
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| |||||||||||| |||||||||||| ||||||||||||||| | || || | ||       |||| ||||||||||||||||||||||||    
T  6197683 caatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatt 6197584  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtgg 161  Q
    | |||||||||||||||||||  ||||||||||||||||||||    
T  6197583 tcgaaggattgtttaataaatcagattttgatggattttgtgg 6197541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 21 - 159
Target Start/End: Original strand, 7051847 - 7051985
Alignment:
Q  21 atcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatttt 120  Q
    ||||||| |||||||||||| |||||||||||| ||||| ||||||||| | ||||| | ||       ||| |||| |||||||||||||||||||||     
T  7051847 atcaagattctttgtcatttaaaaaaagtcttgtggtatacaatcaagactcttcatcacttaaaaaaagtcgtgtgatattcaaaatcattcaaatttc 7051946  T
Q  121 gaaggattgtttaataaattggattttgatggattttgt 159  Q
    |||||||||||||||||||||||||||||||||||||||    
T  7051947 gaaggattgtttaataaattggattttgatggattttgt 7051985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 19 - 161
Target Start/End: Original strand, 1391624 - 1391766
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| || ||||||||| || ||||||||| ||||||||||||||| | || || | ||       |||| ||||||||||||||||||||||||    
T  1391624 caatcaagattcattgtcatttaaataaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatt 1391723  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtgg 161  Q
    | |||||||||||||||||||  ||||||||||||||||||||    
T  1391724 tggaaggattgtttaataaatcagattttgatggattttgtgg 1391766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 19 - 161
Target Start/End: Complemental strand, 2300943 - 2300801
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| |||||||||||| |||||||||||| ||||||||||||||| | || || | ||       ||||  ||||||| |||||||||||||||    
T  2300943 caatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttgatcacttaaaaaaagtctactggtattgaaaatcattcaaatt 2300844  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtgg 161  Q
    | |||||||||||||||||||  ||||||||||||||||||||    
T  2300843 tcgaaggattgtttaataaataagattttgatggattttgtgg 2300801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 19 - 160
Target Start/End: Original strand, 28002665 - 28002806
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| | |||||||||| |||||||||||  ||||||||||||||| | || || | ||       |||| ||| ||||||||||||||||||||    
T  28002665 caatcaagattttttgtcatttaaaaaaagtcttctggtattcaatcaagactcttaatcacttaaaaaaagtctagtgatattcaaaatcattcaaatt 28002764  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtg 160  Q
    | |||||||||||||||||||  |||||||||||||||||||    
T  28002765 tggaaggattgtttaataaatcagattttgatggattttgtg 28002806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 19 - 157
Target Start/End: Original strand, 29076598 - 29076737
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnn-gtcttgtggtattcaaaatcattcaaat 117  Q
    ||||||||| |||||||||||| |||||||||||| ||||||||||| ||||| || || | ||        |||| || ||||||||||||||||||||    
T  29076598 caatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatctagattcttaatcacttaaaaaaaagtctagtagtattcaaaatcattcaaat 29076697  T
Q  118 tttgaaggattgtttaataaattggattttgatggatttt 157  Q
    || |||||||||||||||||||  ||||||||||||||||    
T  29076698 ttcgaaggattgtttaataaatcagattttgatggatttt 29076737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 19 - 157
Target Start/End: Original strand, 29111571 - 29111711
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnn--gtcttgtggtattcaaaatcattcaaa 116  Q
    ||||||||| |||||||||||| |||||||||||| ||||||||||| ||||| || || | ||         |||| || |||||||||||||||||||    
T  29111571 caatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatctagattcttaatcacttaaaaaaaaagtctagtagtattcaaaatcattcaaa 29111670  T
Q  117 ttttgaaggattgtttaataaattggattttgatggatttt 157  Q
    ||| |||||||||||||||||||  ||||||||||||||||    
T  29111671 tttcgaaggattgtttaataaatcagattttgatggatttt 29111711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 93 - 158
Target Start/End: Original strand, 3848284 - 3848348
Alignment:
Q  93 ttgtggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttgatggattttg 158  Q
    |||||||||||||||||||| |||||||||| ||||||||||||||||| |||||| |||||||||    
T  3848284 ttgtggtattcaaaatcatttaaattttgaatgattgtttaataaattgaattttg-tggattttg 3848348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 120
Target Start/End: Original strand, 656966 - 657066
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| |||||| ||||| |||||||||||| ||||||||||||||| | || || | ||       |||| ||||||||| ||||||||||||||    
T  656966 caatcaagattctttg-catttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattctaaatcattcaaatt 657064  T
Q  119 tt 120  Q
    ||    
T  657065 tt 657066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 69
Target Start/End: Original strand, 31895654 - 31895704
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 69  Q
    ||||||||||| ||||  |||| |||||||||||| |||||||||||||||    
T  31895654 caatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaaga 31895704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 69
Target Start/End: Original strand, 34773367 - 34773417
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 69  Q
    ||||||||||| ||||  |||| |||||||||||| |||||||||||||||    
T  34773367 caatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaaga 34773417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 115 - 148
Target Start/End: Complemental strand, 34527652 - 34527619
Alignment:
Q  115 aattttgaaggattgtttaataaattggattttg 148  Q
    ||||||||||||||||||||||||||| ||||||    
T  34527652 aattttgaaggattgtttaataaattgtattttg 34527619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 1391582 - 1391634
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    |||||||||||||||   |||| |||||||||||| | |||||||||||||||    
T  1391582 caatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagatt 1391634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 2300985 - 2300933
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    |||||||||||||||   |||| |||||||||||| | |||||||||||||||    
T  2300985 caatcaagactcttttcaatttaaaaaaagtcttgtgttattcaatcaagatt 2300933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 6197725 - 6197673
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    |||||||||||||||   |||| |||||||||||| | |||||||||||||||    
T  6197725 caatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagatt 6197673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 38 - 74
Target Start/End: Complemental strand, 10644052 - 10644016
Alignment:
Q  38 ttttaaaaaagtcttgaggtattcaatcaagattttt 74  Q
    ||||||||||||||| |||||||||||||||| ||||    
T  10644052 ttttaaaaaagtctttaggtattcaatcaagactttt 10644016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 38 - 74
Target Start/End: Original strand, 30877898 - 30877934
Alignment:
Q  38 ttttaaaaaagtcttgaggtattcaatcaagattttt 74  Q
    ||||||||||||||| |||||||||||||||| ||||    
T  30877898 ttttaaaaaagtctttaggtattcaatcaagactttt 30877934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 118; Significance: 4e-60; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 19 - 201
Target Start/End: Original strand, 13883 - 14065
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||| | ||       |||||||||||||||||||||||||||||    
T  13883 caatcaagactctttgtcattttaaaaaagtattgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatt 13982  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtggtgtaattttaacaagaaaaagtctttcatgaaaagatgag 201  Q
    |  || ||||||||||||||||||||||||||||||||||| |||  ||||||| ||||||||||||||||||||||||||||    
T  13983 tcaaaagattgtttaataaattggattttgatggattttgtagtgggattttaataagaaaaagtctttcatgaaaagatgag 14065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 118; Significance: 4e-60; HSPs: 2)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 19 - 201
Target Start/End: Complemental strand, 21444 - 21262
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||| | ||       |||||||||||||||||||||||||||||    
T  21444 caatcaagactctttgtcattttaaaaaagtattgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatt 21345  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtggtgtaattttaacaagaaaaagtctttcatgaaaagatgag 201  Q
    |  || ||||||||||||||||||||||||||||||||||| |||  ||||||| ||||||||||||||||||||||||||||    
T  21344 tcaaaagattgtttaataaattggattttgatggattttgtagtgggattttaataagaaaaagtctttcatgaaaagatgag 21262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 130 - 201
Target Start/End: Original strand, 28463 - 28535
Alignment:
Q  130 tttaataaattggattttgatggattttg-tggtgtaattttaacaagaaaaagtctttcatgaaaagatgag 201  Q
    ||||||||||||||||||||||||||||| | |||  ||||||| ||||||||||||||||||||||||||||    
T  28463 tttaataaattggattttgatggattttggtagtgggattttaataagaaaaagtctttcatgaaaagatgag 28535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0543 (Bit Score: 105; Significance: 2e-52; HSPs: 2)
Name: scaffold0543
Description:

Target: scaffold0543; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 19 - 201
Target Start/End: Original strand, 10561 - 10753
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| || |||| ||||        ||||||||||||||||||||||||||||    
T  10561 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttctcatcatttaaaaaaaatcttgtggtattcaaaatcattcaaatt 10660  T
Q  119 ttgaaggattgtttaataaattggattttgat----------ggattttgtggtgtaattttaacaagaaaaagtctttcatgaaaagatgag 201  Q
    |  |||||||||||||||||||| ||||||||          ||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  10661 tcaaaggattgtttaataaattgaattttgatggattttatgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgag 10753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0543; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 69
Target Start/End: Original strand, 10519 - 10569
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 69  Q
    ||||||||||| ||||  |||| |||||||||||| |||||||||||||||    
T  10519 caatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaaga 10569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0922 (Bit Score: 104; Significance: 8e-52; HSPs: 1)
Name: scaffold0922
Description:

Target: scaffold0922; HSP #1
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 19 - 155
Target Start/End: Original strand, 4201 - 4337
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||| ||||       |||||||||||||||||||||||||||||    
T  4201 caatcaagactctttgtaattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatt 4300  T
Q  119 ttgaaggattgtttaataaattggattttgatggatt 155  Q
    |||||||||||||||||||||||||||||||||||||    
T  4301 ttgaaggattgtttaataaattggattttgatggatt 4337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 98; Significance: 3e-48; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 19 - 198
Target Start/End: Complemental strand, 39823 - 39634
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||| ||||||||||||  ||||||||||||||||||||| | ||       ||| ||||||||||||||||||||||| |    
T  39823 caatcaagactctttgtcatttttaaaaagtcttgaactattcaatcaagatttttcatcacttaaaaaatgtcatgtggtattcaaaatcattcaaact 39724  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcatgaaaagat 198  Q
    | |||||||| |||||||||||||||||||||||||||||||          ||||||||||||||||||||||||||||||||||||||    
T  39723 tcgaaggattatttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagat 39634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1504 (Bit Score: 76; Significance: 4e-35; HSPs: 1)
Name: scaffold1504
Description:

Target: scaffold1504; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 19 - 201
Target Start/End: Original strand, 864 - 1056
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnn-gtcttgtggtattcaaaatcattcaaat 117  Q
    ||||||||||||||||||||||||||||| || |||||||||||||||||| ||||||| | ||        ||||||||||||||||||||||||||||    
T  864 caatcaagactctttgtcattttaaaaaaatcatgaggtattcaatcaagacttttcatcacttaaaaaaaagtcttgtggtattcaaaatcattcaaat 963  T
Q  118 tttgaaggattgtttaataaat---------tggattttgatggattttgtggtgtaattttaacaagaaaaagtctttcatgaaaagatgag 201  Q
    || |||| ||| ||||||||||         |||||||||  ||||||||| ||||||||||||| |||||||||||||||| |||| |||||    
T  964 ttcgaagaattatttaataaatagattttgatggattttgtgggattttgtagtgtaattttaactagaaaaagtctttcattaaaatatgag 1056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0400 (Bit Score: 70; Significance: 2e-31; HSPs: 2)
Name: scaffold0400
Description:

Target: scaffold0400; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 19 - 161
Target Start/End: Complemental strand, 15239 - 15097
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| |||||||||||| ||||||||||||  |||||||||||||| | || || | ||       |||| ||||||||||||||||||||||||    
T  15239 caatcaagattctttgtcatttaaaaaaagtcttgtagtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatt 15140  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtgg 161  Q
    | |||||||||||||||||||  ||||||||||||||||||||    
T  15139 tcgaaggattgtttaataaatcagattttgatggattttgtgg 15097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0400; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 15281 - 15229
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    |||||||||||||||   |||| |||||||||||| | |||||||||||||||    
T  15281 caatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagatt 15229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0365 (Bit Score: 70; Significance: 2e-31; HSPs: 2)
Name: scaffold0365
Description:

Target: scaffold0365; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 19 - 161
Target Start/End: Complemental strand, 15882 - 15740
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| |||||||||||| ||||||||||||  |||||||||||||| | || || | ||       |||| ||||||||||||||||||||||||    
T  15882 caatcaagattctttgtcatttaaaaaaagtcttgtagtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatt 15783  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtgg 161  Q
    | |||||||||||||||||||  ||||||||||||||||||||    
T  15782 tcgaaggattgtttaataaatcagattttgatggattttgtgg 15740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0365; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 15924 - 15872
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    |||||||||||||||   |||| |||||||||||| | |||||||||||||||    
T  15924 caatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagatt 15872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 69; Significance: 6e-31; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 19 - 201
Target Start/End: Original strand, 100212 - 100404
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| |||||||||||| |||||||||||| |||| |||||||||| | || || | ||       |||| ||||||||||||||||||||||||    
T  100212 caatcaagattctttgtcatttaaaaaaagtcttgtggtactcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatt 100311  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcatgaaaagatgag 201  Q
    |  ||||||||||||||||||   ||||||||||||||||||          ||| ||||||||||||||||||||||||||||||| |||||    
T  100312 tcaaaggattgtttaataaatcaaattttgatggattttgtgggtttttctagtgaaattttaacaagaaaaagtctttcatgaaaacatgag 100404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 68; Significance: 3e-30; HSPs: 2)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 90 - 198
Target Start/End: Complemental strand, 37042 - 36924
Alignment:
Q  90 gtcttgtggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaa 179  Q
    |||||| |||||||||||||||| |||||| |||| |||||||||||||||||||||||||||||||||||          |||||||||||||||||||    
T  37042 gtcttgaggtattcaaaatcattaaaatttcgaagcattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 36943  T
Q  180 aagtctttcatgaaaagat 198  Q
    |||||||||||||||||||    
T  36942 aagtctttcatgaaaagat 36924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 19 - 63
Target Start/End: Complemental strand, 37071 - 37027
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaa 63  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  37071 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaa 37027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 66; Significance: 4e-29; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 19 - 201
Target Start/End: Complemental strand, 58282 - 58090
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga-tttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaat 117  Q
    ||||||||||| |||| ||  |||||||||||||| |||||||| |||||| |||||||| | ||       ||  ||||||||||||||||||||||||    
T  58282 caatcaagactttttg-caacttaaaaaagtcttgtggtattcagtcaagactttttcatcacttaaaaaaagttctgtggtattcaaaatcattcaaat 58184  T
Q  118 tttgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcatgaaaagatgag 201  Q
    || ||| ||||||||||||||||||||||||||||||||||||          || |||||||||||||| ||| |||||||||||||||||||    
T  58183 ttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtataattttaacaagagaaaatctttcatgaaaagatgag 58090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 64; Significance: 6e-28; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 126 - 201
Target Start/End: Original strand, 14878 - 14953
Alignment:
Q  126 attgtttaataaattggattttgatggattttgtggtgtaattttaacaagaaaaagtctttcatgaaaagatgag 201  Q
    |||||||||||||||||||||||  ||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  14878 attgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgag 14953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 19 - 161
Target Start/End: Complemental strand, 39101 - 38959
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| ||||| |||||| |||||||||||| |||||||||| |||| | || || | ||       |||| ||| ||||||||||||||||||||    
T  39101 caatcaagattctttatcatttaaaaaaagtcttgtggtattcaataaagactcttaatcacttaaaagaagtctagtgatattcaaaatcattcaaatt 39002  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtgg 161  Q
    | |||||||||||||||||||  ||||||||||||||||||||    
T  39001 tggaaggattgtttaataaatcagattttgatggattttgtgg 38959  T

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Target: scaffold0004 (Bit Score: 61; Significance: 4e-26; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 19 - 161
Target Start/End: Original strand, 102094 - 102238
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaag--tcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaa 116  Q
    ||||||||| |||||||||||| |||||||  ||||| ||||||||||||||| | || || | ||       |||| ||||||||||||||||||||||    
T  102094 caatcaagattctttgtcatttaaaaaaagagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaa 102193  T
Q  117 ttttgaaggattgtttaataaattggattttgatggattttgtgg 161  Q
    ||| ||| |||||||||||||||  ||||||||||||||||||||    
T  102194 tttcgaaagattgtttaataaatcagattttgatggattttgtgg 102238  T

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Target: scaffold0276 (Bit Score: 54; Significance: 6e-22; HSPs: 2)
Name: scaffold0276
Description:

Target: scaffold0276; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 19 - 161
Target Start/End: Complemental strand, 745 - 603
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| |||||||||||| |||||||| ||| ||||||||||||| | | || || | ||        | | ||||||||||||||||||||||||    
T  745 caatcaagattctttgtcatttaaaaaaagtattgtggtattcaatcaaaactcttaatcacttaaattttttttagtggtattcaaaatcattcaaatt 646  T
Q  119 ttgaaggattgtttaataaattggattttgatggattttgtgg 161  Q
    | |||||||||||||||||||   |||||||||||||||||||    
T  645 tggaaggattgtttaataaatcatattttgatggattttgtgg 603  T

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Target: scaffold0276; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 787 - 735
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    |||||||||||||||   |||| |||||||||||| | |||||||||||||||    
T  787 caatcaagactctttacaatttaaaaaaagtcttgtgttattcaatcaagatt 735  T

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Target: scaffold0151 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 43 - 161
Target Start/End: Complemental strand, 38786 - 38669
Alignment:
Q  43 aaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaattttgaaggattgtttaataaattgg 142  Q
    ||||||||||| ||||||||||||||| | || || | ||       |||| ||||||||||||||||||||||||| ||||||||||||||| |||  |    
T  38786 aaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaat-aatcag 38688  T
Q  143 attttgatggattttgtgg 161  Q
    |||||||||||||||||||    
T  38687 attttgatggattttgtgg 38669  T

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Target: scaffold0007 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 98 - 160
Target Start/End: Original strand, 199905 - 199967
Alignment:
Q  98 gtattcaaaatcattcaaattttgaaggattgtttaataaattggattttgatggattttgtg 160  Q
    ||||| |||||||||||||||||||| || |||||||||||||| |||||||| |||||||||    
T  199905 gtatttaaaatcattcaaattttgaaagagtgtttaataaattgaattttgattgattttgtg 199967  T

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Target: scaffold0010 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 3)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 19 - 76
Target Start/End: Original strand, 233738 - 233795
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttca 76  Q
    |||||||||||||||||||||||||||||||||| |||| ||||||||| | ||||||    
T  233738 caatcaagactctttgtcattttaaaaaagtcttaaggtcttcaatcaaaacttttca 233795  T

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Target: scaffold0010; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 19 - 76
Target Start/End: Original strand, 234586 - 234643
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttca 76  Q
    |||||||||||||||||||||||||||||||||| |||| ||||||||| | ||||||    
T  234586 caatcaagactctttgtcattttaaaaaagtcttaaggtcttcaatcaaaacttttca 234643  T

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Target: scaffold0010; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 76
Target Start/End: Original strand, 222570 - 222627
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttca 76  Q
    ||||||| |||||||||||||||||||||||||| |||| ||||||||| | ||||||    
T  222570 caatcaaaactctttgtcattttaaaaaagtcttaaggtcttcaatcaaaacttttca 222627  T

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Target: scaffold0839 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0839
Description:

Target: scaffold0839; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 125 - 198
Target Start/End: Complemental strand, 3792 - 3709
Alignment:
Q  125 gattgtttaataaattggattttgatggattttgtgg----------tgtaattttaacaagaaaaagtctttcatgaaaagat 198  Q
    |||||||||||||||||||||||||||||||||||||          ||||||||||||||||||| ||||||||| |||||||    
T  3792 gattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaggtctttcataaaaagat 3709  T

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Target: scaffold0202 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0202
Description:

Target: scaffold0202; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 38 - 74
Target Start/End: Complemental strand, 16582 - 16546
Alignment:
Q  38 ttttaaaaaagtcttgaggtattcaatcaagattttt 74  Q
    |||||||||||||||| |||||| |||||||||||||    
T  16582 ttttaaaaaagtcttgtggtatttaatcaagattttt 16546  T

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Target: scaffold0016 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 38 - 74
Target Start/End: Complemental strand, 81820 - 81784
Alignment:
Q  38 ttttaaaaaagtcttgaggtattcaatcaagattttt 74  Q
    ||||| |||||||||| ||||||||||||||||||||    
T  81820 ttttataaaagtcttgtggtattcaatcaagattttt 81784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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