View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12637_high_16 (Length: 348)

Name: NF12637_high_16
Description: NF12637
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12637_high_16
NF12637_high_16
[»] chr1 (46 HSPs)
chr1 (20-342)||(35138039-35138363)
chr1 (99-171)||(46607940-46608012)
chr1 (93-171)||(37351448-37351526)
chr1 (100-171)||(32729675-32729746)
chr1 (87-171)||(9926141-9926226)
chr1 (101-170)||(24122155-24122224)
chr1 (99-171)||(8254747-8254819)
chr1 (99-171)||(24674523-24674595)
chr1 (100-171)||(4621232-4621303)
chr1 (100-171)||(15059397-15059468)
chr1 (99-171)||(36155883-36155955)
chr1 (99-166)||(1486550-1486617)
chr1 (96-171)||(30677303-30677378)
chr1 (102-168)||(23041655-23041721)
chr1 (93-171)||(26513143-26513221)
chr1 (99-171)||(7766722-7766794)
chr1 (99-171)||(17935899-17935971)
chr1 (99-171)||(22910001-22910073)
chr1 (99-171)||(27454859-27454931)
chr1 (99-171)||(34778469-34778541)
chr1 (87-171)||(1094998-1095080)
chr1 (99-166)||(48699889-48699956)
chr1 (93-166)||(27159209-27159282)
chr1 (99-171)||(7197242-7197314)
chr1 (103-171)||(7578543-7578611)
chr1 (106-161)||(18646990-18647045)
chr1 (132-171)||(24217139-24217178)
chr1 (100-171)||(45331616-45331687)
chr1 (104-171)||(52135261-52135328)
chr1 (108-157)||(1761660-1761709)
chr1 (99-171)||(21726859-21726931)
chr1 (99-171)||(36921507-36921578)
chr1 (93-171)||(1379021-1379100)
chr1 (116-171)||(5315478-5315533)
chr1 (87-166)||(16539725-16539804)
chr1 (102-164)||(2783122-2783184)
chr1 (99-153)||(16899633-16899687)
chr1 (133-171)||(31162914-31162952)
chr1 (99-164)||(8077777-8077841)
chr1 (106-171)||(33905505-33905570)
chr1 (127-171)||(13857709-13857753)
chr1 (127-171)||(14603954-14603998)
chr1 (99-171)||(23734247-23734319)
chr1 (99-171)||(23741439-23741511)
chr1 (107-171)||(26986080-26986144)
chr1 (99-171)||(45859038-45859110)
[»] chr3 (58 HSPs)
chr3 (87-171)||(26158928-26159013)
chr3 (99-171)||(33398463-33398535)
chr3 (99-171)||(21363073-21363145)
chr3 (99-171)||(40133444-40133516)
chr3 (99-171)||(48977518-48977590)
chr3 (98-171)||(53848429-53848502)
chr3 (99-171)||(8097274-8097346)
chr3 (103-171)||(24407395-24407463)
chr3 (99-171)||(25289710-25289781)
chr3 (99-171)||(26174243-26174315)
chr3 (99-171)||(32151554-32151626)
chr3 (99-171)||(49258257-49258329)
chr3 (100-171)||(24165710-24165781)
chr3 (100-171)||(52821631-52821702)
chr3 (93-171)||(15566495-15566573)
chr3 (93-171)||(53424172-53424250)
chr3 (99-171)||(10190737-10190809)
chr3 (99-171)||(18176882-18176954)
chr3 (99-171)||(35493041-35493113)
chr3 (99-171)||(39041847-39041919)
chr3 (105-168)||(50731235-50731298)
chr3 (105-168)||(50781556-50781619)
chr3 (102-171)||(54475814-54475883)
chr3 (99-171)||(7485526-7485597)
chr3 (99-171)||(8456145-8456217)
chr3 (99-171)||(10083814-10083886)
chr3 (99-171)||(25379891-25379963)
chr3 (99-171)||(30257754-30257826)
chr3 (99-171)||(30807148-30807219)
chr3 (99-171)||(31537833-31537905)
chr3 (99-171)||(45272411-45272483)
chr3 (99-171)||(45529750-45529821)
chr3 (99-171)||(46576478-46576550)
chr3 (99-171)||(53233906-53233977)
chr3 (104-171)||(4048085-4048152)
chr3 (100-171)||(25017620-25017690)
chr3 (103-158)||(55371302-55371357)
chr3 (99-171)||(8958030-8958102)
chr3 (93-141)||(29915295-29915343)
chr3 (93-141)||(29964448-29964496)
chr3 (99-171)||(48105007-48105079)
chr3 (99-170)||(1692963-1693034)
chr3 (96-171)||(2511292-2511367)
chr3 (99-158)||(4252404-4252463)
chr3 (96-159)||(49167186-49167249)
chr3 (103-161)||(30695251-30695308)
chr3 (100-169)||(4462763-4462832)
chr3 (99-171)||(6041665-6041737)
chr3 (99-171)||(52455644-52455716)
chr3 (108-171)||(1178310-1178372)
chr3 (100-171)||(6127584-6127654)
chr3 (112-171)||(26535173-26535232)
chr3 (96-171)||(51532916-51532991)
chr3 (101-171)||(32094752-32094822)
chr3 (118-171)||(3747730-3747783)
chr3 (99-171)||(25344053-25344124)
chr3 (99-171)||(34492570-34492642)
chr3 (99-171)||(40302641-40302713)
[»] scaffold0049 (1 HSPs)
scaffold0049 (99-171)||(66884-66956)
[»] chr8 (52 HSPs)
chr8 (96-171)||(20306039-20306114)
chr8 (96-171)||(21092672-21092747)
chr8 (99-171)||(21603364-21603436)
chr8 (99-171)||(2639406-2639478)
chr8 (99-171)||(4718779-4718851)
chr8 (99-171)||(19471744-19471816)
chr8 (99-171)||(19542668-19542740)
chr8 (99-171)||(19589956-19590028)
chr8 (99-171)||(39349390-39349462)
chr8 (89-171)||(33747005-33747088)
chr8 (93-171)||(264395-264473)
chr8 (93-171)||(651448-651526)
chr8 (93-171)||(837183-837261)
chr8 (93-171)||(7557946-7558024)
chr8 (101-171)||(8765521-8765591)
chr8 (99-171)||(2618320-2618392)
chr8 (99-171)||(12312979-12313051)
chr8 (99-171)||(18128647-18128719)
chr8 (99-171)||(20470051-20470122)
chr8 (99-171)||(34237650-34237722)
chr8 (100-167)||(42643117-42643184)
chr8 (105-171)||(28193614-28193680)
chr8 (99-171)||(3734618-3734690)
chr8 (99-171)||(6953003-6953074)
chr8 (99-171)||(15259401-15259473)
chr8 (99-171)||(32879413-32879485)
chr8 (103-171)||(34610682-34610750)
chr8 (99-171)||(42328138-42328210)
chr8 (104-171)||(16990722-16990789)
chr8 (101-171)||(28908959-28909030)
chr8 (93-171)||(25248475-25248552)
chr8 (99-171)||(4698718-4698790)
chr8 (84-167)||(13579902-13579986)
chr8 (100-171)||(24018518-24018589)
chr8 (87-171)||(34694570-34694656)
chr8 (100-170)||(2166831-2166901)
chr8 (105-171)||(14633094-14633160)
chr8 (102-171)||(20505689-20505758)
chr8 (89-166)||(33534567-33534644)
chr8 (99-171)||(1372397-1372468)
chr8 (127-171)||(5740378-5740422)
chr8 (99-171)||(10292188-10292260)
chr8 (99-159)||(13749190-13749250)
chr8 (99-171)||(28964167-28964238)
chr8 (102-165)||(8387460-8387523)
chr8 (102-157)||(28088423-28088478)
chr8 (87-166)||(34639208-34639287)
chr8 (96-171)||(43817744-43817819)
chr8 (105-159)||(36848757-36848811)
chr8 (87-171)||(22200555-22200640)
chr8 (126-166)||(9047279-9047319)
chr8 (99-171)||(36094818-36094890)
[»] chr7 (54 HSPs)
chr7 (99-171)||(3851891-3851963)
chr7 (99-171)||(17196945-17197017)
chr7 (96-171)||(2344430-2344505)
chr7 (93-171)||(654700-654778)
chr7 (99-171)||(11997983-11998055)
chr7 (99-171)||(28647103-28647175)
chr7 (99-171)||(29861804-29861876)
chr7 (102-171)||(22638425-22638494)
chr7 (99-171)||(22120022-22120094)
chr7 (99-171)||(40542905-40542977)
chr7 (96-171)||(7175857-7175932)
chr7 (99-166)||(7275411-7275478)
chr7 (96-166)||(31712902-31712972)
chr7 (87-171)||(21574097-21574182)
chr7 (75-171)||(47381000-47381096)
chr7 (99-171)||(2751405-2751477)
chr7 (99-171)||(21835285-21835357)
chr7 (103-171)||(22696459-22696527)
chr7 (99-171)||(27312286-27312358)
chr7 (96-171)||(16374125-16374200)
chr7 (99-166)||(21217833-21217900)
chr7 (96-171)||(22703617-22703692)
chr7 (114-171)||(7262364-7262421)
chr7 (87-171)||(1766139-1766223)
chr7 (99-171)||(8943396-8943468)
chr7 (87-171)||(12226651-12226735)
chr7 (99-171)||(25333537-25333608)
chr7 (99-171)||(28089953-28090025)
chr7 (100-171)||(10091323-10091393)
chr7 (100-171)||(17279666-17279737)
chr7 (96-171)||(27704132-27704207)
chr7 (96-166)||(23330739-23330809)
chr7 (93-171)||(39145647-39145725)
chr7 (106-171)||(674431-674496)
chr7 (106-171)||(27009501-27009566)
chr7 (102-171)||(31274050-31274119)
chr7 (99-171)||(18044241-18044313)
chr7 (99-171)||(23092230-23092302)
chr7 (103-171)||(28951009-28951077)
chr7 (99-171)||(31197724-31197796)
chr7 (99-171)||(41907509-41907580)
chr7 (99-171)||(42913508-42913580)
chr7 (106-171)||(32849732-32849797)
chr7 (101-154)||(37056341-37056394)
chr7 (99-171)||(2103189-2103259)
chr7 (99-171)||(23012503-23012575)
chr7 (105-171)||(11909949-11910015)
chr7 (105-171)||(19421371-19421437)
chr7 (104-166)||(33137825-33137887)
chr7 (113-166)||(9769732-9769785)
chr7 (103-168)||(12211533-12211598)
chr7 (111-164)||(30345511-30345564)
chr7 (107-171)||(36772298-36772362)
chr7 (103-171)||(38372975-38373043)
[»] chr5 (57 HSPs)
chr5 (99-171)||(32059435-32059507)
chr5 (99-171)||(19145407-19145479)
chr5 (99-171)||(22693065-22693137)
chr5 (99-170)||(13038451-13038522)
chr5 (96-170)||(13659241-13659315)
chr5 (102-171)||(36895558-36895627)
chr5 (99-171)||(4603907-4603979)
chr5 (99-171)||(8484656-8484728)
chr5 (99-171)||(11926496-11926568)
chr5 (99-171)||(13108445-13108517)
chr5 (99-171)||(18207337-18207409)
chr5 (99-171)||(27498726-27498798)
chr5 (99-171)||(31287941-31288013)
chr5 (100-171)||(19456206-19456277)
chr5 (101-171)||(37495186-37495256)
chr5 (102-171)||(10869560-10869629)
chr5 (102-171)||(41351099-41351168)
chr5 (99-171)||(30485958-30486030)
chr5 (99-171)||(38630974-38631046)
chr5 (96-171)||(33709498-33709573)
chr5 (96-171)||(34310269-34310344)
chr5 (100-166)||(7085626-7085692)
chr5 (104-170)||(27487550-27487616)
chr5 (93-171)||(38684331-38684409)
chr5 (100-161)||(11464913-11464974)
chr5 (103-171)||(930481-930549)
chr5 (103-171)||(6014275-6014343)
chr5 (99-171)||(15641101-15641172)
chr5 (99-171)||(35425143-35425215)
chr5 (104-171)||(24158161-24158228)
chr5 (101-171)||(22648154-22648224)
chr5 (113-171)||(28614481-28614539)
chr5 (99-171)||(9659306-9659378)
chr5 (99-171)||(12317150-12317221)
chr5 (99-171)||(12398443-12398515)
chr5 (99-171)||(22392818-22392890)
chr5 (106-166)||(41084120-41084180)
chr5 (100-171)||(5067392-5067463)
chr5 (99-166)||(21236362-21236429)
chr5 (105-171)||(10837432-10837498)
chr5 (96-166)||(31206370-31206440)
chr5 (101-171)||(37972915-37972985)
chr5 (93-166)||(5049260-5049333)
chr5 (115-171)||(10631284-10631340)
chr5 (99-171)||(23270517-23270589)
chr5 (84-171)||(25343355-25343442)
chr5 (101-159)||(8780594-8780652)
chr5 (101-171)||(25548529-25548599)
chr5 (105-171)||(25750608-25750674)
chr5 (99-171)||(10399903-10399976)
chr5 (96-137)||(15971151-15971192)
chr5 (113-158)||(43244586-43244631)
chr5 (139-171)||(15115694-15115726)
chr5 (134-166)||(21377249-21377281)
chr5 (99-171)||(26009259-26009331)
chr5 (134-166)||(32340219-32340251)
chr5 (99-171)||(34049941-34050013)
[»] chr2 (47 HSPs)
chr2 (87-171)||(8192347-8192431)
chr2 (87-171)||(19174880-19174964)
chr2 (96-171)||(11941205-11941280)
chr2 (86-171)||(14486941-14487027)
chr2 (96-171)||(44929841-44929916)
chr2 (99-171)||(25293289-25293361)
chr2 (99-171)||(44946048-44946120)
chr2 (96-171)||(18692087-18692162)
chr2 (100-166)||(18976455-18976521)
chr2 (101-166)||(27269344-27269409)
chr2 (99-171)||(2140481-2140553)
chr2 (99-171)||(15038089-15038161)
chr2 (99-171)||(30466825-30466897)
chr2 (99-171)||(35171930-35172002)
chr2 (84-171)||(12543258-12543345)
chr2 (96-171)||(33827568-33827643)
chr2 (86-171)||(28194133-28194219)
chr2 (93-171)||(34516409-34516487)
chr2 (102-171)||(39957891-39957960)
chr2 (99-171)||(19054156-19054228)
chr2 (99-171)||(28669003-28669075)
chr2 (99-171)||(41329972-41330044)
chr2 (99-171)||(43374325-43374397)
chr2 (88-171)||(13599320-13599403)
chr2 (96-166)||(36390569-36390638)
chr2 (102-171)||(5394150-5394219)
chr2 (99-171)||(8259027-8259099)
chr2 (99-171)||(9400956-9401028)
chr2 (100-171)||(24196133-24196204)
chr2 (136-171)||(31175720-31175755)
chr2 (100-159)||(36242319-36242378)
chr2 (99-166)||(44610169-44610236)
chr2 (101-171)||(3943872-3943942)
chr2 (96-166)||(6714295-6714365)
chr2 (105-171)||(19605841-19605907)
chr2 (93-171)||(29361672-29361750)
chr2 (104-165)||(31439396-31439457)
chr2 (99-171)||(17324895-17324966)
chr2 (100-168)||(29698277-29698345)
chr2 (100-171)||(4852660-4852731)
chr2 (96-171)||(18708604-18708679)
chr2 (99-166)||(31778161-31778228)
chr2 (100-166)||(13266620-13266686)
chr2 (100-141)||(44976178-44976219)
chr2 (99-171)||(714120-714192)
chr2 (99-171)||(19849963-19850034)
chr2 (127-171)||(27290732-27290776)
[»] chr4 (59 HSPs)
chr4 (76-171)||(7093475-7093573)
chr4 (99-171)||(19660527-19660599)
chr4 (99-171)||(22488023-22488095)
chr4 (99-171)||(5609197-5609269)
chr4 (99-171)||(34844753-34844825)
chr4 (99-171)||(45787699-45787771)
chr4 (104-168)||(52494623-52494687)
chr4 (99-166)||(40058852-40058919)
chr4 (101-171)||(44343646-44343716)
chr4 (99-165)||(52983749-52983815)
chr4 (88-171)||(13017831-13017914)
chr4 (99-171)||(27528790-27528862)
chr4 (99-171)||(32986327-32986399)
chr4 (99-171)||(35229298-35229370)
chr4 (99-171)||(54127337-54127409)
chr4 (102-165)||(9646217-9646280)
chr4 (96-171)||(25852342-25852417)
chr4 (99-164)||(20077986-20078051)
chr4 (99-171)||(4912056-4912128)
chr4 (99-171)||(20566480-20566552)
chr4 (99-171)||(34723929-34724001)
chr4 (99-171)||(51535751-51535823)
chr4 (103-166)||(23639758-23639821)
chr4 (103-166)||(23645416-23645479)
chr4 (99-166)||(46714523-46714590)
chr4 (105-171)||(23131431-23131497)
chr4 (105-171)||(28791250-28791316)
chr4 (99-171)||(4064990-4065062)
chr4 (107-171)||(7391960-7392024)
chr4 (99-171)||(9978504-9978576)
chr4 (103-171)||(24273356-24273424)
chr4 (99-171)||(32990565-32990637)
chr4 (99-171)||(33696274-33696346)
chr4 (100-171)||(6427119-6427189)
chr4 (104-171)||(12824535-12824602)
chr4 (96-171)||(36131505-36131580)
chr4 (100-171)||(51595153-51595224)
chr4 (93-171)||(25969498-25969575)
chr4 (93-171)||(39343584-39343662)
chr4 (105-171)||(41621577-41621643)
chr4 (113-169)||(3391443-3391499)
chr4 (99-171)||(43719082-43719154)
chr4 (91-171)||(46759098-46759178)
chr4 (104-171)||(12710312-12710379)
chr4 (107-166)||(40307677-40307736)
chr4 (105-171)||(17637847-17637912)
chr4 (113-171)||(21621680-21621738)
chr4 (133-171)||(24672300-24672338)
chr4 (105-171)||(33289190-33289256)
chr4 (105-171)||(37172901-37172967)
chr4 (93-166)||(18875517-18875590)
chr4 (102-151)||(22630204-22630253)
chr4 (134-171)||(31140097-31140134)
chr4 (87-168)||(47464106-47464187)
chr4 (101-166)||(49287989-49288054)
chr4 (99-171)||(27574448-27574520)
chr4 (99-171)||(34835660-34835731)
chr4 (99-171)||(42508376-42508448)
chr4 (99-171)||(53787052-53787124)
[»] scaffold1175 (1 HSPs)
scaffold1175 (99-171)||(2421-2493)
[»] chr6 (32 HSPs)
chr6 (100-171)||(14504077-14504148)
chr6 (99-171)||(9239105-9239177)
chr6 (99-171)||(34147476-34147548)
chr6 (99-171)||(34160092-34160164)
chr6 (100-171)||(3222631-3222702)
chr6 (98-171)||(5360066-5360139)
chr6 (99-171)||(15360093-15360165)
chr6 (99-171)||(21982316-21982387)
chr6 (100-171)||(21148506-21148577)
chr6 (101-171)||(654141-654211)
chr6 (99-164)||(17149458-17149523)
chr6 (89-166)||(17225786-17225863)
chr6 (99-171)||(1345065-1345137)
chr6 (99-171)||(17081049-17081121)
chr6 (103-171)||(28672201-28672269)
chr6 (99-166)||(11449001-11449068)
chr6 (100-171)||(14213013-14213084)
chr6 (105-171)||(9690633-9690699)
chr6 (99-164)||(10377846-10377911)
chr6 (87-171)||(3418906-3418990)
chr6 (99-171)||(11007295-11007367)
chr6 (105-171)||(33499611-33499677)
chr6 (106-171)||(11841037-11841102)
chr6 (104-157)||(33718478-33718531)
chr6 (99-171)||(9208382-9208454)
chr6 (99-171)||(15730490-15730562)
chr6 (99-166)||(9844068-9844135)
chr6 (99-141)||(12390555-12390597)
chr6 (134-171)||(27904565-27904602)
chr6 (129-158)||(28741849-28741878)
chr6 (134-166)||(14946673-14946705)
chr6 (101-141)||(27866228-27866268)
[»] scaffold0217 (1 HSPs)
scaffold0217 (99-171)||(7304-7376)
[»] scaffold0026 (2 HSPs)
scaffold0026 (96-171)||(97361-97436)
scaffold0026 (89-171)||(5950-6033)
[»] scaffold0576 (1 HSPs)
scaffold0576 (99-171)||(5077-5149)
[»] scaffold0328 (1 HSPs)
scaffold0328 (99-171)||(13042-13114)
[»] scaffold0160 (1 HSPs)
scaffold0160 (87-171)||(29138-29222)
[»] scaffold0102 (1 HSPs)
scaffold0102 (99-171)||(39222-39294)
[»] scaffold0070 (1 HSPs)
scaffold0070 (99-171)||(40455-40526)
[»] scaffold0019 (1 HSPs)
scaffold0019 (99-171)||(161939-162011)
[»] scaffold1712 (1 HSPs)
scaffold1712 (96-171)||(602-677)
[»] scaffold0623 (1 HSPs)
scaffold0623 (99-171)||(1052-1123)
[»] scaffold0366 (1 HSPs)
scaffold0366 (99-171)||(9295-9366)
[»] scaffold0171 (1 HSPs)
scaffold0171 (100-166)||(11420-11486)
[»] scaffold0016 (1 HSPs)
scaffold0016 (99-171)||(32418-32489)
[»] scaffold0199 (1 HSPs)
scaffold0199 (104-171)||(8446-8513)
[»] scaffold0028 (1 HSPs)
scaffold0028 (102-171)||(27903-27972)
[»] scaffold0051 (1 HSPs)
scaffold0051 (99-171)||(52866-52938)
[»] scaffold0459 (1 HSPs)
scaffold0459 (100-171)||(10690-10760)
[»] scaffold0020 (1 HSPs)
scaffold0020 (87-171)||(123061-123144)


Alignment Details
Target: chr1 (Bit Score: 245; Significance: 1e-136; HSPs: 46)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 245; E-Value: 1e-136
Query Start/End: Original strand, 20 - 342
Target Start/End: Original strand, 35138039 - 35138363
Alignment:
Q  20 aggttaatgcgtcttcaaggtaagctttgaatctagtttgaatatatgcaaaattcatacagagctagcttagaacggacccccgcaagtgggcggtggg 119  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  35138039 aggttaatgcgtcttcaaggtaagctttgaatctagtttgaatatatgcaaaattcatacagagctggcttagaacggacccccgcaagtgggcggtggg 35138138  T
Q  120 attgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa--nnnnnnnnnnnngcttagagatatattttcagtaaaaactaattaa 217  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||              ||||||||||||||||||||||||||||||||||    
T  35138139 attgattccctcggattagtcggtccttggatcggataccgagttttaaaaaatatatatatatatgcttagagatatattttcagtaaaaactaattaa 35138238  T
Q  218 agttcactggtttaattaatttttatctgtatttatttttctatgcagagcaaggcaaggattttgttgacaagtannnnnnnatttgaatgcaatggcc 317  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||    
T  35138239 agttcactggtttaattaatttttatctgtatttatttttctatgcagagcaaggcaaggattttgttgacaagtatttttttatttgaatgcaatggcc 35138338  T
Q  318 tgttcatgatgggggtctgtgctgc 342  Q
    |||||||||||||||| ||||||||    
T  35138339 tgttcatgatgggggtgtgtgctgc 35138363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 99 - 171
Target Start/End: Original strand, 46607940 - 46608012
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| |||||||| ||||    
T  46607940 cccccgcaagtgggcggtgggattgatcccctcggattagtcggtccttggatcggatatcgagttttcaaaa 46608012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 93 - 171
Target Start/End: Complemental strand, 37351526 - 37351448
Alignment:
Q  93 aacggacccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||| ||||| ||||||||||||||||||| | |||||| |||||||||||||||||||||||||||||||| |||||    
T  37351526 aacgggcccccacaagtgggcggtgggattggtcccctcggattagtcggtccttggatcggataccgagtttaaaaaa 37351448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 100 - 171
Target Start/End: Original strand, 32729675 - 32729746
Alignment:
Q  100 ccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    |||||||||||||||||||||||||| |||| | ||||||||||| ||||||||||||||||||||| ||||    
T  32729675 ccccgcaagtgggcggtgggattgatccccttggattagtcggtctttggatcggataccgagttttcaaaa 32729746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 87 - 171
Target Start/End: Complemental strand, 9926226 - 9926141
Alignment:
Q  87 gcttagaacgga-cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    |||||||||||| ||||||||| ||||||||||||||||| || |   |||||||||||||| |||||||||||||||||||||||    
T  9926226 gcttagaacggagcccccgcaactgggcggtgggattgatccctttagattagtcggtccttcgatcggataccgagttttaaaaa 9926141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 101 - 170
Target Start/End: Original strand, 24122155 - 24122224
Alignment:
Q  101 cccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaa 170  Q
    ||||||||||||||||||||||| | |||||| |||||||| | ||||||||||||||||||||||||||    
T  24122155 cccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttaaaa 24122224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 99 - 171
Target Start/End: Complemental strand, 8254819 - 8254747
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||||||||||||||||||||||||| |||| |||||||||| | |||| ||||||||||||||||| ||||    
T  8254819 cccccgcaagtgggcggtgggattgatccccttgaattagtcgattcttgaatcggataccgagttttcaaaa 8254747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 99 - 171
Target Start/End: Original strand, 24674523 - 24674595
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||||||||||||||||||||||| | |||||| |||||||| | ||||||||||||||||| |||||||||    
T  24674523 cccccgcaagtgggcggtgggattggtcccctcgtattagtcgattcttggatcggataccgaattttaaaaa 24674595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 100 - 171
Target Start/End: Complemental strand, 4621303 - 4621232
Alignment:
Q  100 ccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    |||||||||||||||||||||||| | |||||| |||||||| | |||||||||||||||||||||| ||||    
T  4621303 ccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttcaaaa 4621232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 100 - 171
Target Start/End: Complemental strand, 15059468 - 15059397
Alignment:
Q  100 ccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    |||||||||||||||||| ||||| | ||||||||||||||| | |||||||||||||||||||||| ||||    
T  15059468 ccccgcaagtgggcggtgagattggtcccctcgaattagtcgattcttggatcggataccgagttttcaaaa 15059397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 99 - 171
Target Start/End: Complemental strand, 36155955 - 36155883
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    |||||||| |||||||||||||||| | || || ||||||||| | |||||||||||||||||||||||||||    
T  36155955 cccccgcaggtgggcggtgggattggtcccttcaaattagtcgattcttggatcggataccgagttttaaaaa 36155883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 99 - 166
Target Start/End: Original strand, 1486550 - 1486617
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagtttt 166  Q
    ||||||||||||| ||||||||| | | |||||  |||||||||||||||||||||||||||||||||    
T  1486550 cccccgcaagtggacggtgggatcggtcccctccgattagtcggtccttggatcggataccgagtttt 1486617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 96 - 171
Target Start/End: Original strand, 30677303 - 30677378
Alignment:
Q  96 ggacccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    |||||||||||||||||||||||||||| | |||||  |||||||||| |||||| |||||| |||||||| ||||    
T  30677303 ggacccccgcaagtgggcggtgggattggtcccctcagattagtcggttcttggaccggatatcgagttttcaaaa 30677378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 102 - 168
Target Start/End: Original strand, 23041655 - 23041721
Alignment:
Q  102 ccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaa 168  Q
    |||||||||| | ||||||||| | ||||||||||||||| | ||||||||||||||||||||||||    
T  23041655 ccgcaagtggacagtgggattggtcccctcgaattagtcgattcttggatcggataccgagttttaa 23041721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 93 - 171
Target Start/End: Complemental strand, 26513221 - 26513143
Alignment:
Q  93 aacggacccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||| ||||| |||||||||||||||| || | |||||| |||||||| | ||||||||| |||||||||||||||||    
T  26513221 aacgggcccccacaagtgggcggtgggaatggtcccctcggattagtcgattcttggatcgaataccgagttttaaaaa 26513143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 99 - 171
Target Start/End: Complemental strand, 7766794 - 7766722
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||||||||||||||||||||||| | |||||| |||||||| | |||| |||||||| |||||||| ||||    
T  7766794 cccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttgaatcggatatcgagttttcaaaa 7766722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 99 - 171
Target Start/End: Original strand, 17935899 - 17935971
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    |||||||||||||||| |||||||| | | |||| |||||||| | ||||||||||||||||||||| |||||    
T  17935899 cccccgcaagtgggcgatgggattggtccactcggattagtcgattcttggatcggataccgagtttaaaaaa 17935971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 99 - 171
Target Start/End: Original strand, 22910001 - 22910073
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||||||||||||||||||||||  | |||||| |||||||| | ||| |||||||||||||||||| ||||    
T  22910001 cccccgcaagtgggcggtgggatttgtcccctcggattagtcgatacttcgatcggataccgagttttcaaaa 22910073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 99 - 171
Target Start/End: Complemental strand, 27454931 - 27454859
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    |||||||| |||||||||||||||| | |||||| |||||||| | ||||||||||||||| |||||| ||||    
T  27454931 cccccgcatgtgggcggtgggattggtcccctcggattagtcgattcttggatcggatacctagttttcaaaa 27454859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 99 - 171
Target Start/End: Original strand, 34778469 - 34778541
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||||||||||| ||||||||||| | |||| | |||||||| | ||||||||||||||||||||| |||||    
T  34778469 cccccgcaagtggacggtgggattggtccccttggattagtcgattcttggatcggataccgagtttaaaaaa 34778541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 87 - 171
Target Start/End: Complemental strand, 1095080 - 1094998
Alignment:
Q  87 gcttagaacggacccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccg-agttttaaaaa 171  Q
    |||||||||||  |||||||||||||   |||||||| |||||||| |||||||||||||| ||||||||| || |||||||||||    
T  1095080 gcttagaacggggccccgcaagtggg---tgggattggttccctcggattagtcggtccttagatcggatatcgaagttttaaaaa 1094998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 99 - 166
Target Start/End: Original strand, 48699889 - 48699956
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagtttt 166  Q
    ||||||||||||||||||||||||| | || ||| |||||||| | ||||||||||||| ||||||||    
T  48699889 cccccgcaagtgggcggtgggattgttcccttcggattagtcgattcttggatcggatatcgagtttt 48699956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 93 - 166
Target Start/End: Original strand, 27159209 - 27159282
Alignment:
Q  93 aacggacccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagtttt 166  Q
    ||||| ||||||||||||| ||||||||||| | |||||  |||||||| || |||||||||||| ||||||||    
T  27159209 aacgggcccccgcaagtggacggtgggattggtcccctcagattagtcgatctttggatcggatatcgagtttt 27159282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 99 - 171
Target Start/End: Complemental strand, 7197314 - 7197242
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    |||| |||||||||||||| ||||| | |||||| |||||||| | | |||||||||||||||||||| ||||    
T  7197314 cccctgcaagtgggcggtgagattggtcccctcggattagtcgattcatggatcggataccgagtttttaaaa 7197242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 103 - 171
Target Start/End: Original strand, 7578543 - 7578611
Alignment:
Q  103 cgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    |||||||||| |||||||||| |||||||| |||||| | |  ||||||||||||||||||||| ||||    
T  7578543 cgcaagtgggtggtgggattggttccctcggattagttgatttttggatcggataccgagttttcaaaa 7578611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 106 - 161
Target Start/End: Original strand, 18646990 - 18647045
Alignment:
Q  106 aagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccga 161  Q
    |||||||||||| ||||||| ||||||||||||||| | |||| ||||||||||||    
T  18646990 aagtgggcggtgagattgatcccctcgaattagtcgattcttgaatcggataccga 18647045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 132 - 171
Target Start/End: Original strand, 24217139 - 24217178
Alignment:
Q  132 gaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  24217139 gaattagtcggtccttagatcggataccgagttttaaaaa 24217178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 100 - 171
Target Start/End: Complemental strand, 45331687 - 45331616
Alignment:
Q  100 ccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    |||||||||||| |||||||||| || |||||  |||| ||| | |||| ||||||||||||||||||||||    
T  45331687 ccccgcaagtggacggtgggattaatcccctcagattaatcgattcttgaatcggataccgagttttaaaaa 45331616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 104 - 171
Target Start/End: Original strand, 52135261 - 52135328
Alignment:
Q  104 gcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    |||||||| ||||||||||| | |||||  |||||||||| |||||||||||||| ||||||| ||||    
T  52135261 gcaagtggacggtgggattggtcccctcatattagtcggttcttggatcggatactgagtttttaaaa 52135328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 108 - 157
Target Start/End: Original strand, 1761660 - 1761709
Alignment:
Q  108 gtgggcggtgggattgattccctcgaattagtcggtccttggatcggata 157  Q
    ||||| ||||| |||||||| |||||||||||||||| ||||||||||||    
T  1761660 gtgggtggtggaattgattctctcgaattagtcggtcattggatcggata 1761709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 99 - 171
Target Start/End: Original strand, 21726859 - 21726931
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||| ||||||||||||||| ||||| |||||  |||| ||| | ||||||||||||||||| ||| |||||    
T  21726859 cccccacaagtgggcggtggggttgatcccctcagattaatcgattcttggatcggataccgaatttaaaaaa 21726931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 99 - 171
Target Start/End: Complemental strand, 36921578 - 36921507
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||||||||||| |||||||||| | |||||| ||||||||| |  ||| |||||||||||||||| |||||    
T  36921578 cccccgcaagtggacggtgggatt-agtccctcaaattagtcgattattgaatcggataccgagtttaaaaaa 36921507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 93 - 171
Target Start/End: Original strand, 1379021 - 1379100
Alignment:
Q  93 aacggacccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgag-ttttaaaaa 171  Q
    ||||| ||||||||||||| ||||| ||||| | |||||  |||||||| | ||| |||||||||||||| |||||||||    
T  1379021 aacgggcccccgcaagtggacggtgagattggtcccctcagattagtcgattcttagatcggataccgagcttttaaaaa 1379100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 116 - 171
Target Start/End: Original strand, 5315478 - 5315533
Alignment:
Q  116 tgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    |||||||| | |||||| || ||||| | |||||||||||||||||||||||||||    
T  5315478 tgggattggtcccctcggataagtcgattcttggatcggataccgagttttaaaaa 5315533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 87 - 166
Target Start/End: Original strand, 16539725 - 16539804
Alignment:
Q  87 gcttagaacggacccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagtttt 166  Q
    |||||||||||  ||| | ||||||| |||||||||| | ||||| ||||||||| | |||| |||||||||||| ||||    
T  16539725 gcttagaacggggccctgtaagtgggtggtgggattggtcccctcaaattagtcgatacttgtatcggataccgaatttt 16539804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 102 - 164
Target Start/End: Original strand, 2783122 - 2783184
Alignment:
Q  102 ccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagtt 164  Q
    |||||||||| || || |||| |||| ||| ||||||||||| ||||||||||||| ||||||    
T  2783122 ccgcaagtggacgatgagattaattctctcaaattagtcggttcttggatcggataacgagtt 2783184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 99 - 153
Target Start/End: Original strand, 16899633 - 16899687
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcg 153  Q
    |||| |||||||| ||||| ||||| | |||||| ||||||||||||||||||||    
T  16899633 cccctgcaagtggacggtgagattggtcccctcggattagtcggtccttggatcg 16899687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 133 - 171
Target Start/End: Original strand, 31162914 - 31162952
Alignment:
Q  133 aattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||||||| |||||| ||||||||||||||||||||||    
T  31162914 aattagtcgatccttgaatcggataccgagttttaaaaa 31162952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 164
Target Start/End: Original strand, 8077777 - 8077841
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagtt 164  Q
    ||||||||||||||||||||||||| | |||||| |||| ||| |  |||||||||| ||||||||    
T  8077777 cccccgcaagtgggcggtgggattggtcccctcg-attaatcgattattggatcggagaccgagtt 8077841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 171
Target Start/End: Complemental strand, 33905570 - 33905505
Alignment:
Q  106 aagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    |||||| ||||||||||||| ||||| ||||  ||| | ||| |||||||||||||||||| ||||    
T  33905570 aagtggacggtgggattgatcccctcaaatttatcgattctttgatcggataccgagttttcaaaa 33905505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 127 - 171
Target Start/End: Complemental strand, 13857753 - 13857709
Alignment:
Q  127 ccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||| ||||||||| |||||||| |||||||||||||| |||||    
T  13857753 ccctcaaattagtcgatccttggaccggataccgagtttaaaaaa 13857709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 127 - 171
Target Start/End: Original strand, 14603954 - 14603998
Alignment:
Q  127 ccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    |||||| |||||||| | |||||||||||||||||||||| ||||    
T  14603954 ccctcggattagtcgattcttggatcggataccgagttttcaaaa 14603998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 99 - 171
Target Start/End: Original strand, 23734247 - 23734319
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    |||||||||||||||||||  |||| | |||||  |||||||| | |||| |||||||||| |||||| ||||    
T  23734247 cccccgcaagtgggcggtgaaattggtcccctcagattagtcgattcttgaatcggataccaagttttcaaaa 23734319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 99 - 171
Target Start/End: Original strand, 23741439 - 23741511
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    |||||||||||||||||||  |||| | |||||  |||||||| | |||| |||||||||| |||||| ||||    
T  23741439 cccccgcaagtgggcggtgaaattggtcccctcagattagtcgattcttgaatcggataccaagttttcaaaa 23741511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 107 - 171
Target Start/End: Complemental strand, 26986144 - 26986080
Alignment:
Q  107 agtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||| |||||||||||   |||||| | ||||||||||||||  ||||||||||||||| ||||    
T  26986144 agtggccggtgggattggacccctcggaatagtcggtccttgggccggataccgagttttcaaaa 26986080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 99 - 171
Target Start/End: Complemental strand, 45859110 - 45859038
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    |||||||||||||| ||| |||||| | |||||| |||||| | |  |||||||||||||||| |||| ||||    
T  45859110 cccccgcaagtgggtggtaggattggtcccctcggattagttgattattggatcggataccgaatttttaaaa 45859038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 62; Significance: 1e-26; HSPs: 58)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 87 - 171
Target Start/End: Original strand, 26158928 - 26159013
Alignment:
Q  87 gcttagaacgga-cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    |||||||||||| ||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||  ||||||||    
T  26158928 gcttagaacggagcccccgcaagtgggcggtgggattgatcccctcggattagtcggtccttggatcggataccgaaatttaaaaa 26159013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 99 - 171
Target Start/End: Complemental strand, 33398535 - 33398463
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||||||||||||||||||||||| ||||||||||||||||| | ||||||||||||||||| |||||||||    
T  33398535 cccccgcaagtgggcggtgggattggttccctcgaattagtcgattcttggatcggataccgaattttaaaaa 33398463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 99 - 171
Target Start/End: Original strand, 21363073 - 21363145
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||||||||||||||||||||||| |||||||| |||| ||| | |||||||||||||||||||||||||||    
T  21363073 cccccgcaagtgggcggtgggattggttccctcggattaatcgattcttggatcggataccgagttttaaaaa 21363145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 99 - 171
Target Start/End: Complemental strand, 40133516 - 40133444
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||||||||||||||||||||||| | ||||||||||||||| | |||||||||||||||||||||| ||||    
T  40133516 cccccgcaagtgggcggtgggattggtcccctcgaattagtcgattcttggatcggataccgagttttcaaaa 40133444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 99 - 171
Target Start/End: Original strand, 48977518 - 48977590
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    |||| |||||||||||||||||||| | |||||| ||||||||||||||||||||||||||||||||| ||||    
T  48977518 cccctgcaagtgggcggtgggattggtcccctcggattagtcggtccttggatcggataccgagttttcaaaa 48977590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 98 - 171
Target Start/End: Complemental strand, 53848502 - 53848429
Alignment:
Q  98 acccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    |||||||||||||||||||||||||| | |||||| |||||||| | |||||||||||||||||||||| ||||    
T  53848502 acccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttcaaaa 53848429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 99 - 171
Target Start/End: Complemental strand, 8097346 - 8097274
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||||||||||||||||||||||| | |||||| |||||||| | |||||||||||||||||||||| ||||    
T  8097346 cccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttcaaaa 8097274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 103 - 171
Target Start/End: Original strand, 24407395 - 24407463
Alignment:
Q  103 cgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||||||||||||||||||| | |||||| |||||||| | |||||||||||||||||||||||||||    
T  24407395 cgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttaaaaa 24407463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 99 - 171
Target Start/End: Complemental strand, 25289781 - 25289710
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||||||||||||||||||||||| | ||||||||||||||| | |||||||||||||||||||||| ||||    
T  25289781 cccccgcaagtgggcggtgggattggt-ccctcgaattagtcgattcttggatcggataccgagttttcaaaa 25289710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 99 - 171
Target Start/End: Original strand, 26174243 - 26174315
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||||||||||||||||||||||| | |||||| |||||||| | |||||||||||||||||||||| ||||    
T  26174243 cccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttcaaaa 26174315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 99 - 171
Target Start/End: Original strand, 32151554 - 32151626
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||||||||||||||||| ||||| | ||||||||||||||| | |||||||||||||||||||||| ||||    
T  32151554 cccccgcaagtgggcggtgagattggtcccctcgaattagtcgattcttggatcggataccgagtttttaaaa 32151626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 99 - 171
Target Start/End: Complemental strand, 49258329 - 49258257
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||| ||||||||||||||||||| | |||||| |||||||| | |||||||||||||||||||||||||||    
T  49258329 cccccacaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttaaaaa 49258257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 100 - 171
Target Start/End: Complemental strand, 24165781 - 24165710
Alignment:
Q  100 ccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    |||||||||||||||||||||||| | |||||| |||||||| | |||||||||||||||||||||| ||||    
T  24165781 ccccgcaagtgggcggtgggattgttcccctcggattagtcgattcttggatcggataccgagttttcaaaa 24165710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 100 - 171
Target Start/End: Complemental strand, 52821702 - 52821631
Alignment:
Q  100 ccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||| |||||||||||||||||| | |||||| |||||||| | |||||||||||||||||||||||||||    
T  52821702 ccccgtaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttaaaaa 52821631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 93 - 171
Target Start/End: Complemental strand, 15566573 - 15566495
Alignment:
Q  93 aacggacccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||| ||||||||||||||||||||||||| | |||||  |||||||| | |||||||||||||||||||||| ||||    
T  15566573 aacgggcccccgcaagtgggcggtgggattggtcccctcagattagtcgattcttggatcggataccgagttttcaaaa 15566495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 93 - 171
Target Start/End: Complemental strand, 53424250 - 53424172
Alignment:
Q  93 aacggacccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||| |||||||||||| |||||||||||| | |||||| |||||||| | |||||||||||||||||||||| ||||    
T  53424250 aacgggcccccgcaagtgagcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttcaaaa 53424172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 99 - 171
Target Start/End: Complemental strand, 10190809 - 10190737
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||||||||||| ||||||||||| | |||||| |||||||| | |||||||||||||||||||||| ||||    
T  10190809 cccccgcaagtggacggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttcaaaa 10190737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 99 - 171
Target Start/End: Complemental strand, 18176954 - 18176882
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||||||||||||||||||||||| | || ||| |||||||| | |||||||||||||| ||||||||||||    
T  18176954 cccccgcaagtgggcggtgggattggtcccatcggattagtcgattcttggatcggatacagagttttaaaaa 18176882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 99 - 171
Target Start/End: Original strand, 35493041 - 35493113
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||||||||||||||||||||||| | |||||| |||||||| | ||||||| | |||||||||||||||||    
T  35493041 cccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggattgaataccgagttttaaaaa 35493113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 99 - 171
Target Start/End: Complemental strand, 39041919 - 39041847
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    |||||||||||||| |||||||||| | | |||| |||||||| | |||||||||||||||||||||||||||    
T  39041919 cccccgcaagtgggtggtgggattggtccactcggattagtcgattcttggatcggataccgagttttaaaaa 39041847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 105 - 168
Target Start/End: Complemental strand, 50731298 - 50731235
Alignment:
Q  105 caagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaa 168  Q
    ||||||||||||||||||| | |||||  |||||||| ||||||||||||||||||||||||||    
T  50731298 caagtgggcggtgggattggtcccctcagattagtcgatccttggatcggataccgagttttaa 50731235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 105 - 168
Target Start/End: Original strand, 50781556 - 50781619
Alignment:
Q  105 caagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaa 168  Q
    ||||||||||||||||||| | |||||  |||||||| ||||||||||||||||||||||||||    
T  50781556 caagtgggcggtgggattggtcccctcagattagtcgatccttggatcggataccgagttttaa 50781619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 102 - 171
Target Start/End: Original strand, 54475814 - 54475883
Alignment:
Q  102 ccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    |||||||||||||||||||||| | |||| | |||||||| | |||||||| ||||||||||||||||||    
T  54475814 ccgcaagtgggcggtgggattggtccccttggattagtcgattcttggatcagataccgagttttaaaaa 54475883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 99 - 171
Target Start/End: Complemental strand, 7485597 - 7485526
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    |||| |||||||| ||||||||||| | |||||| |||||||| | |||||||||||||||||||||||||||    
T  7485597 cccctgcaagtggccggtgggattggt-ccctcggattagtcgattcttggatcggataccgagttttaaaaa 7485526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 99 - 171
Target Start/End: Complemental strand, 8456217 - 8456145
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||||||||||||| ||||||||| | |||||| |||||||| | |||| ||||||||||||||||| ||||    
T  8456217 cccccgcaagtgggcagtgggattggtcccctcggattagtcgattcttgaatcggataccgagttttcaaaa 8456145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 99 - 171
Target Start/End: Complemental strand, 10083886 - 10083814
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||| ||||||| ||||||||||| | |||||| |||||||| | |||||||||||||||||||||| ||||    
T  10083886 cccccacaagtggacggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttcaaaa 10083814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 99 - 171
Target Start/End: Original strand, 25379891 - 25379963
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    |||||||||| |||||||||||||| | |||||| |||||||| | |||||||||||||| |||||| |||||    
T  25379891 cccccgcaagcgggcggtgggattggtcccctcggattagtcgattcttggatcggatactgagtttaaaaaa 25379963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 99 - 171
Target Start/End: Original strand, 30257754 - 30257826
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    |||||||||||||||||||| |||| | |||||| |||||||| | ||||||||||||||||| |||| ||||    
T  30257754 cccccgcaagtgggcggtggcattggtcccctcggattagtcgattcttggatcggataccgaattttcaaaa 30257826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 99 - 171
Target Start/End: Complemental strand, 30807219 - 30807148
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    |||||||||||||||||| |||||| | |||||| |||||||| | |||||||||||||||||||||| ||||    
T  30807219 cccccgcaagtgggcggtaggattggt-ccctcggattagtcgattcttggatcggataccgagttttcaaaa 30807148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 99 - 171
Target Start/End: Complemental strand, 31537905 - 31537833
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    |||| |||||||||||||| ||||| | ||||||||||||||  | ||||||||||||| |||||||||||||    
T  31537905 cccctgcaagtgggcggtgagattggtcccctcgaattagtcaattcttggatcggatatcgagttttaaaaa 31537833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 99 - 171
Target Start/End: Complemental strand, 45272483 - 45272411
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||||||||||||||||||||||| | |||||| |||||| |   |||||||||||||||||||||| ||||    
T  45272483 cccccgcaagtgggcggtgggattggtcccctcggattagttgactcttggatcggataccgagttttcaaaa 45272411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 99 - 171
Target Start/End: Complemental strand, 45529821 - 45529750
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||||||||||||||||||||||| | |||||| |||||||| | ||| |||||||||||||||||| ||||    
T  45529821 cccccgcaagtgggcggtgggattggtcccctcggattagtcgattctt-gatcggataccgagttttcaaaa 45529750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 99 - 171
Target Start/End: Original strand, 46576478 - 46576550
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    |||||||||||||||||| |||||| | |||| | |||||||| | |||||||||||||||||||||| ||||    
T  46576478 cccccgcaagtgggcggtcggattggtccccttggattagtcgattcttggatcggataccgagttttcaaaa 46576550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 99 - 171
Target Start/End: Complemental strand, 53233977 - 53233906
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||||||||||||||||||||||| | |||||| |||||||| | ||| |||||||||||||||||| ||||    
T  53233977 cccccgcaagtgggcggtgggattggtcccctcggattagtcgattctt-gatcggataccgagttttcaaaa 53233906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 104 - 171
Target Start/End: Original strand, 4048085 - 4048152
Alignment:
Q  104 gcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    |||||||| ||||||||||| | |||||| |||||| | | |||||||||||||||||||||||||||    
T  4048085 gcaagtggacggtgggattggtcccctcggattagttgattcttggatcggataccgagttttaaaaa 4048152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 100 - 171
Target Start/End: Original strand, 25017620 - 25017690
Alignment:
Q  100 ccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    |||||||||||||||||||||||| |||| | || ||||||| | ||||||||| |||||||||||||||||    
T  25017620 ccccgcaagtgggcggtgggattggttccttgga-ttagtcgattcttggatcgaataccgagttttaaaaa 25017690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 103 - 158
Target Start/End: Complemental strand, 55371357 - 55371302
Alignment:
Q  103 cgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggatac 158  Q
    ||||||||||||||||||||| | |||||| |||||||| ||||||||||||||||    
T  55371357 cgcaagtgggcggtgggattggtcccctcggattagtcgatccttggatcggatac 55371302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 99 - 171
Target Start/End: Complemental strand, 8958102 - 8958030
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||||||||||||||||||||||| | |||||  |||| ||| | |||||||| ||||||||||||| ||||    
T  8958102 cccccgcaagtgggcggtgggattggtcccctctgattaatcgattcttggatcagataccgagttttcaaaa 8958030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 93 - 141
Target Start/End: Complemental strand, 29915343 - 29915295
Alignment:
Q  93 aacggacccccgcaagtgggcggtgggattgattccctcgaattagtcg 141  Q
    ||||| ||||||||||||||||||||||||||| || ||||||||||||    
T  29915343 aacgggcccccgcaagtgggcggtgggattgatcccatcgaattagtcg 29915295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 93 - 141
Target Start/End: Complemental strand, 29964496 - 29964448
Alignment:
Q  93 aacggacccccgcaagtgggcggtgggattgattccctcgaattagtcg 141  Q
    ||||| ||||||||||||||||||||||||||| || ||||||||||||    
T  29964496 aacgggcccccgcaagtgggcggtgggattgatcccatcgaattagtcg 29964448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 99 - 171
Target Start/End: Original strand, 48105007 - 48105079
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||| ||||||||||||| ||||| | || ||| |||||||| | ||||||||||||||||||||| |||||    
T  48105007 cccccacaagtgggcggtgagattggtcccttcggattagtcgattcttggatcggataccgagtttaaaaaa 48105079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 99 - 170
Target Start/End: Original strand, 1692963 - 1693034
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaa 170  Q
    ||||||||||||||||||||||||    |||||  |||||||| | |||| |||||||||||||||||||||    
T  1692963 cccccgcaagtgggcggtgggatttgccccctcagattagtcgattcttgaatcggataccgagttttaaaa 1693034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 96 - 171
Target Start/End: Complemental strand, 2511367 - 2511292
Alignment:
Q  96 ggacccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||| |||||||||||||||||||||| |  |||||||||||| | | |||| |||||||||| |||||| ||||    
T  2511367 ggacctccgcaagtgggcggtgggattggtctcctcgaattagtagattcttgaatcggataccaagttttcaaaa 2511292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 99 - 158
Target Start/End: Complemental strand, 4252463 - 4252404
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggatac 158  Q
    ||||| ||||||| ||||||||||| | |||||| |||||||| ||||||||||||||||    
T  4252463 cccccacaagtggacggtgggattggtcccctcggattagtcgatccttggatcggatac 4252404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 96 - 159
Target Start/End: Original strand, 49167186 - 49167249
Alignment:
Q  96 ggacccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggatacc 159  Q
    ||||||||||||||||| |||||| ||| |||||| |||||||||||| | |||||| ||||||    
T  49167186 ggacccccgcaagtgggtggtggggttggttcccttgaattagtcggttcatggatcagatacc 49167249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 103 - 161
Target Start/End: Complemental strand, 30695308 - 30695251
Alignment:
Q  103 cgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccga 161  Q
    |||||||||||| |||||||| | |||||  ||||||||||||||||||||||||||||    
T  30695308 cgcaagtgggcgatgggattggt-ccctcagattagtcggtccttggatcggataccga 30695251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 100 - 169
Target Start/End: Original strand, 4462763 - 4462832
Alignment:
Q  100 ccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaa 169  Q
    |||||||||||| ||||||||||||| | |||| ||||||   | ||||||| |||||||||||||||||    
T  4462763 ccccgcaagtggacggtgggattgatccactcggattagtttattcttggattggataccgagttttaaa 4462832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 99 - 171
Target Start/End: Complemental strand, 6041737 - 6041665
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||| ||| ||||||||| ||||| | ||||   |||||||||| |||||||| ||||||||||||||||||    
T  6041737 ccccctcaaatgggcggtgagattgttccccttagattagtcggttcttggatcagataccgagttttaaaaa 6041665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 99 - 171
Target Start/End: Complemental strand, 52455716 - 52455644
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||||||||||   |||||||||| | |||||| |||||||| | ||||||| |||||||||||||| ||||    
T  52455716 cccccgcaagtgactggtgggattggtcccctcggattagtcgattcttggattggataccgagttttcaaaa 52455644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 108 - 171
Target Start/End: Original strand, 1178310 - 1178372
Alignment:
Q  108 gtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    |||||||||||||||| | |||||| ||||||||   |||||||||||||||||||||| ||||    
T  1178310 gtgggcggtgggattggt-ccctcggattagtcgaatcttggatcggataccgagttttcaaaa 1178372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 100 - 171
Target Start/End: Original strand, 6127584 - 6127654
Alignment:
Q  100 ccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    |||||||| ||| ||||||||||| | ||||| |||||||| ||||||| ||||||||| |||||| |||||    
T  6127584 ccccgcaaatggacggtgggattggtcccctcaaattagtc-gtccttgtatcggatactgagtttaaaaaa 6127654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 112 - 171
Target Start/End: Original strand, 26535173 - 26535232
Alignment:
Q  112 gcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    |||||| ||||| |||| ||||||||||||||| || ||||||||||||| |||| ||||    
T  26535173 gcggtgagattggttccttcgaattagtcggtcattagatcggataccgaatttttaaaa 26535232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 96 - 171
Target Start/End: Original strand, 51532916 - 51532991
Alignment:
Q  96 ggacccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    |||||||||||||||| ||||||||||| | |||||  |||||||||| ||||   || |||||||||||| ||||    
T  51532916 ggacccccgcaagtggacggtgggattggtcccctcagattagtcggttcttgatccgaataccgagttttcaaaa 51532991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 101 - 171
Target Start/End: Complemental strand, 32094822 - 32094752
Alignment:
Q  101 cccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    |||| ||| ||| |||||||||| | | |||  |||||||||| |||||||||||||||||||||| ||||    
T  32094822 cccgtaagcgggtggtgggattggtcctctcatattagtcggttcttggatcggataccgagttttcaaaa 32094752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 171
Target Start/End: Original strand, 3747730 - 3747783
Alignment:
Q  118 ggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    |||||| | |||||| |||||||| | |||||||||||||||||||||| ||||    
T  3747730 ggattggtcccctcggattagtcgattcttggatcggataccgagttttcaaaa 3747783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 99 - 171
Target Start/End: Complemental strand, 25344124 - 25344053
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||||| |||||||| |||||||| |||| ||| |||||||| | ||| ||||| |||||||||||| ||||    
T  25344124 cccccgctagtgggcgatgggattggttcc-tcggattagtcgattcttagatcgaataccgagttttcaaaa 25344053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 99 - 171
Target Start/End: Complemental strand, 34492642 - 34492570
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||||||||||||||||||||||| | |  ||  |||||| | | |||||||| ||||||||||||| ||||    
T  34492642 cccccgcaagtgggcggtgggattggtccattcagattagttgattcttggatctgataccgagtttttaaaa 34492570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 99 - 171
Target Start/End: Complemental strand, 40302713 - 40302641
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||||||| ||| |||||||||||   ||||| |||||||||||||||||   ||||||||| |||| ||||    
T  40302713 cccccgcaattggacggtgggattggacccctcaaattagtcggtccttgggctggataccgatttttcaaaa 40302641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 61; Significance: 4e-26; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 99 - 171
Target Start/End: Original strand, 66884 - 66956
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||||||||||||||||||||||| | |||||| ||||||||||||||||||||||||||||||||||||||    
T  66884 cccccgcaagtgggcggtgggattggtcccctcggattagtcggtccttggatcggataccgagttttaaaaa 66956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 60; Significance: 2e-25; HSPs: 52)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 96 - 171
Target Start/End: Original strand, 20306039 - 20306114
Alignment:
Q  96 ggacccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    |||||||||||||||||||||||||||| | ||||||||||||||| |||||||||||||||||||||||| ||||    
T  20306039 ggacccccgcaagtgggcggtgggattggtcccctcgaattagtcgatccttggatcggataccgagttttcaaaa 20306114  T

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Target: chr8; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 96 - 171
Target Start/End: Original strand, 21092672 - 21092747
Alignment:
Q  96 ggacccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    |||||||||||||||||||||||||||| | ||||||||||||||| |||||||||||||||||||||||| ||||    
T  21092672 ggacccccgcaagtgggcggtgggattggtcccctcgaattagtcgatccttggatcggataccgagttttcaaaa 21092747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 99 - 171
Target Start/End: Original strand, 21603364 - 21603436
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||||||||||||||||||||||| | |||||| |||||||| | |||||||||||||||||||||||||||    
T  21603364 cccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttaaaaa 21603436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 99 - 171
Target Start/End: Complemental strand, 2639478 - 2639406
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||||||||||||||||||||||| | |||||| |||||||| | |||||||||||||||||||||| ||||    
T  2639478 cccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttcaaaa 2639406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 99 - 171
Target Start/End: Original strand, 4718779 - 4718851
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||||||||||||||||||||||| | |||||| |||||||| | |||||||||||||||||||||| ||||    
T  4718779 cccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttcaaaa 4718851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 99 - 171
Target Start/End: Original strand, 19471744 - 19471816
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    |||||||||||||||| |||||||| | ||||||||||||||| | |||||||||||||||||||||| ||||    
T  19471744 cccccgcaagtgggcgatgggattggtcccctcgaattagtcgatacttggatcggataccgagttttcaaaa 19471816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 99 - 171
Target Start/End: Original strand, 19542668 - 19542740
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    |||||||||||||||| |||||||| | ||||||||||||||| | |||||||||||||||||||||| ||||    
T  19542668 cccccgcaagtgggcgatgggattggtcccctcgaattagtcgatacttggatcggataccgagttttcaaaa 19542740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 99 - 171
Target Start/End: Complemental strand, 19590028 - 19589956
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    |||||||||||||||| |||||||| | ||||||||||||||| | |||||||||||||||||||||| ||||    
T  19590028 cccccgcaagtgggcgatgggattggtcccctcgaattagtcgatacttggatcggataccgagttttcaaaa 19589956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 99 - 171
Target Start/End: Original strand, 39349390 - 39349462
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||||||||||||||||||||||||| |||||| |||||||| | ||||||||||||||| |||||| ||||    
T  39349390 cccccgcaagtgggcggtgggattgatcccctcggattagtcgattcttggatcggataccaagttttcaaaa 39349462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 89 - 171
Target Start/End: Original strand, 33747005 - 33747088
Alignment:
Q  89 ttagaacgga-cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    |||||||||| ||||||||||||| |||||| |||| ||| |||| |||||||| |||||||||||||||||||||||| ||||    
T  33747005 ttagaacggagcccccgcaagtggacggtggaattggttctctcggattagtcgatccttggatcggataccgagttttcaaaa 33747088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 93 - 171
Target Start/End: Complemental strand, 264473 - 264395
Alignment:
Q  93 aacggacccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||| ||||| ||| ||||||||| ||||||| ||||||||||||||| | ||||||||||||||||| |||||||||    
T  264473 aacgggcccccacaaatgggcggtgagattgatcccctcgaattagtcgattcttggatcggataccgaattttaaaaa 264395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 93 - 171
Target Start/End: Original strand, 651448 - 651526
Alignment:
Q  93 aacggacccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||| ||||| ||| ||||||||| ||||||| ||||||||||||||| | ||||||||||||||||| |||||||||    
T  651448 aacgggcccccacaaatgggcggtgagattgatcccctcgaattagtcgattcttggatcggataccgaattttaaaaa 651526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 93 - 171
Target Start/End: Original strand, 837183 - 837261
Alignment:
Q  93 aacggacccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||| ||||| ||| ||||||||| ||||||| ||||||||||||||| | ||||||||||||||||| |||||||||    
T  837183 aacgggcccccacaaatgggcggtgagattgatcccctcgaattagtcgattcttggatcggataccgaattttaaaaa 837261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 93 - 171
Target Start/End: Complemental strand, 7558024 - 7557946
Alignment:
Q  93 aacggacccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||||||||||||||||| ||||||||||| | ||||||||||||||| |  ||| |||||||||||||||| |||||    
T  7558024 aacggacccccgcaagtggacggtgggattggtcccctcgaattagtcgatttttgcatcggataccgagtttaaaaaa 7557946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 101 - 171
Target Start/End: Complemental strand, 8765591 - 8765521
Alignment:
Q  101 cccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||||||||||||||||||||| | |||||| |||||||| | |||||||||||||||||||||| ||||    
T  8765591 cccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttcaaaa 8765521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 99 - 171
Target Start/End: Original strand, 2618320 - 2618392
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||||||||||||||||||||||| | |||||| |||||||| | |||||||||||| ||||||||| ||||    
T  2618320 cccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggattccgagttttcaaaa 2618392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 99 - 171
Target Start/End: Original strand, 12312979 - 12313051
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||| ||||||||||||||||||||| ||||||||||||||||| ||| || |||| |||||||||| ||||    
T  12312979 cccccacaagtgggcggtgggattgatcccctcgaattagtcggttcttagagcggaaaccgagtttttaaaa 12313051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 99 - 171
Target Start/End: Original strand, 18128647 - 18128719
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||||||||||||||||||||||| | | |||  |||||||||| ||||||||| |||||||||||||||||    
T  18128647 cccccgcaagtgggcggtgggattggtcctctcagattagtcggttcttggatcgaataccgagttttaaaaa 18128719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 99 - 171
Target Start/End: Original strand, 20470051 - 20470122
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||||||||||||||||||||||| |||| ||| |||||||| |  ||||||||||||||||||||||||||    
T  20470051 cccccgcaagtgggcggtgggattggttcc-tcggattagtcgatttttggatcggataccgagttttaaaaa 20470122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 99 - 171
Target Start/End: Complemental strand, 34237722 - 34237650
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    |||||||||||| |||||||||||| | |||||| |||||||| | |||||||||||||||||||||| ||||    
T  34237722 cccccgcaagtgagcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttcaaaa 34237650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 100 - 167
Target Start/End: Complemental strand, 42643184 - 42643117
Alignment:
Q  100 ccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagtttta 167  Q
    |||||||||||||||||||||||| | |||||| |||||| | | |||||||||||||||||||||||    
T  42643184 ccccgcaagtgggcggtgggattggtcccctcgcattagttgattcttggatcggataccgagtttta 42643117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 105 - 171
Target Start/End: Original strand, 28193614 - 28193680
Alignment:
Q  105 caagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||||||||||||||||| | |||||| |||||||| | ||||||||||||||||||||| |||||    
T  28193614 caagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttaaaaaa 28193680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 99 - 171
Target Start/End: Complemental strand, 3734690 - 3734618
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||||||| ||||| ||||||||| | |||||| |||||||| | |||||||||||||||||||||| ||||    
T  3734690 cccccgcaaatgggcagtgggattggtcccctcggattagtcgattcttggatcggataccgagttttcaaaa 3734618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 99 - 171
Target Start/End: Complemental strand, 6953074 - 6953003
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||||||||| ||||||||||||| | |||||| |||||||| | ||||||||| |||||||||||||||||    
T  6953074 cccccgcaagttggcggtgggattggt-ccctcggattagtcgattcttggatcgaataccgagttttaaaaa 6953003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 99 - 171
Target Start/End: Complemental strand, 15259473 - 15259401
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    |||||||||||||||||||  |||| | ||||||||||||||| | |||||||||||| |||||||| |||||    
T  15259473 cccccgcaagtgggcggtgtaattggtcccctcgaattagtcgattcttggatcggatgccgagtttaaaaaa 15259401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 99 - 171
Target Start/End: Original strand, 32879413 - 32879485
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||| ||||||||||||||||||| | |||||| |||||||| | ||||||| |||||||||||||| ||||    
T  32879413 cccccacaagtgggcggtgggattggtcccctcggattagtcgattcttggattggataccgagttttcaaaa 32879485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 103 - 171
Target Start/End: Complemental strand, 34610750 - 34610682
Alignment:
Q  103 cgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    |||||||||||||| | |||| | ||||||||||||||| | |||||||||||||||||||||| ||||    
T  34610750 cgcaagtgggcggtagaattggtcccctcgaattagtcgattcttggatcggataccgagttttcaaaa 34610682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 99 - 171
Target Start/End: Original strand, 42328138 - 42328210
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||| ||||||| || |||||||| | ||||||||||||||| | |||||||||||||||||||||| ||||    
T  42328138 cccccacaagtggacgatgggattggtcccctcgaattagtcgattcttggatcggataccgagttttcaaaa 42328210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 104 - 171
Target Start/End: Original strand, 16990722 - 16990789
Alignment:
Q  104 gcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||||||||||||||| || | |||| | |||||||||||||||||||||||||| |||||| ||||    
T  16990722 gcaagtgggcggtgggactggtccccttggattagtcggtccttggatcggataccaagttttcaaaa 16990789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 101 - 171
Target Start/End: Original strand, 28908959 - 28909030
Alignment:
Q  101 cccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatc-ggataccgagttttaaaaa 171  Q
    |||||||||||||| || ||||||| |||||  ||||||||||||||||||| ||| |||||||||||||||    
T  28908959 cccgcaagtgggcgatgtgattgatcccctcagattagtcggtccttggatcgggacaccgagttttaaaaa 28909030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 93 - 171
Target Start/End: Original strand, 25248475 - 25248552
Alignment:
Q  93 aacggacccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||| ||| ||||||||||||||||||||| | |||||| |||||||| |  || |||||||||||||||||||||||    
T  25248475 aacgggccctcgcaagtgggcggtgggattggtcccctcggattagtcgat-ttttgatcggataccgagttttaaaaa 25248552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 99 - 171
Target Start/End: Complemental strand, 4698790 - 4698718
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    |||||||||||| |||||||||||| | |||||| |||||||| | | ||||| |||||||||||||| ||||    
T  4698790 cccccgcaagtgagcggtgggattggtcccctcggattagtcgattcatggattggataccgagttttcaaaa 4698718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 84 - 167
Target Start/End: Complemental strand, 13579986 - 13579902
Alignment:
Q  84 ctagcttagaacgga-cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagtttta 167  Q
    ||||||||||||||| ||||| ||||||| ||||| ||||| |||| ||| |||| | ||||||| |||||||||| ||||||||    
T  13579986 ctagcttagaacggagcccccacaagtggacggtgagattggttccatcggattaattggtccttagatcggatactgagtttta 13579902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 100 - 171
Target Start/End: Original strand, 24018518 - 24018589
Alignment:
Q  100 ccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    |||| ||||||||||||| ||||| | |||| |||||||||||| |||||| |||||| |||||||| ||||    
T  24018518 ccccacaagtgggcggtgagattggtccccttgaattagtcggttcttggaccggatatcgagttttcaaaa 24018589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 87 - 171
Target Start/End: Complemental strand, 34694656 - 34694570
Alignment:
Q  87 gcttagaacgga--cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||||||||||  ||||| | ||||| ||||||||||| | |||||  ||||||| |||||||||||||||| |||||||| ||||    
T  34694656 gcttagaacggaatccccctctagtggacggtgggattggtcccctcagattagtctgtccttggatcggataacgagttttcaaaa 34694570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 100 - 170
Target Start/End: Original strand, 2166831 - 2166901
Alignment:
Q  100 ccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaa 170  Q
    |||||||||||||||||||||||| | |||||  |||||||| |  || ||| ||||||||||||||||||    
T  2166831 ccccgcaagtgggcggtgggattggtcccctcagattagtcgattttttgattggataccgagttttaaaa 2166901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 105 - 171
Target Start/End: Original strand, 14633094 - 14633160
Alignment:
Q  105 caagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||||||||||||||||| | |||| | |||||||| | ||||||||||||||| |||||| ||||    
T  14633094 caagtgggcggtgggattggtccccttggattagtcgattcttggatcggataccaagttttcaaaa 14633160  T

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Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 102 - 171
Target Start/End: Original strand, 20505689 - 20505758
Alignment:
Q  102 ccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    |||||||||||||||||||||| | ||||| |||||| |||| ||| |||| ||| ||||||||| ||||    
T  20505689 ccgcaagtgggcggtgggattggtcccctcaaattagccggttcttagatcagatgccgagttttcaaaa 20505758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 89 - 166
Target Start/End: Complemental strand, 33534644 - 33534567
Alignment:
Q  89 ttagaacggacccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagtttt 166  Q
    ||||||||| || || |||||||   ||||||||| | || ||| ||||||||||||||||||||| |||||||||||    
T  33534644 ttagaacggccctccacaagtggatcgtgggattggtcccttcggattagtcggtccttggatcggttaccgagtttt 33534567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 99 - 171
Target Start/End: Complemental strand, 1372468 - 1372397
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||||||||  ||||||||||||||| ||||  ||||| | | ||||||||||||||| |||||||||||||    
T  1372468 cccccgcaagcaggcggtgggattgatcccctttaattaattgatccttggatcggata-cgagttttaaaaa 1372397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 127 - 171
Target Start/End: Complemental strand, 5740422 - 5740378
Alignment:
Q  127 ccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    |||||| |||||||||||||||||||||| |||||||||| ||||    
T  5740422 ccctcggattagtcggtccttggatcggacaccgagttttcaaaa 5740378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 99 - 171
Target Start/End: Original strand, 10292188 - 10292260
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||| ||||||||||||||||||| | || ||| |||||| | | ||||||||| |||||||||||| ||||    
T  10292188 cccccacaagtgggcggtgggattggtcccttcggattagttgattcttggatcgaataccgagtttttaaaa 10292260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 99 - 159
Target Start/End: Original strand, 13749190 - 13749250
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggatacc 159  Q
    ||||||||||||||| |||| |||| | |||||| ||||||| ||||||||||| ||||||    
T  13749190 cccccgcaagtgggcagtggaattggtcccctcggattagtcagtccttggatcagatacc 13749250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 99 - 171
Target Start/End: Original strand, 28964167 - 28964238
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    |||||||||||||||| |||||||| | ||||||||||||||| | ||| ||||| |||| ||||||| ||||    
T  28964167 cccccgcaagtgggcg-tgggattggtcccctcgaattagtcgattcttagatcgaatactgagttttcaaaa 28964238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 102 - 165
Target Start/End: Complemental strand, 8387523 - 8387460
Alignment:
Q  102 ccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttt 165  Q
    |||||||||| |||||||||||||  ||||| |||||| | ||||| |||||||||| ||||||    
T  8387523 ccgcaagtggacggtgggattgatctcctcggattagttgatccttagatcggatactgagttt 8387460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 102 - 157
Target Start/End: Original strand, 28088423 - 28088478
Alignment:
Q  102 ccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggata 157  Q
    |||||||||||||||||||||||| |||||  | |||||| | |||||||||||||    
T  28088423 ccgcaagtgggcggtgggattgatcccctcagaatagtcgattcttggatcggata 28088478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 87 - 166
Target Start/End: Complemental strand, 34639287 - 34639208
Alignment:
Q  87 gcttagaacggacccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagtttt 166  Q
    ||||||||||| || | |||||||| |||| |||||| | || |||||||| |||||||||| || ||||||| ||||||    
T  34639287 gcttagaacgggcctctgcaagtggacggtaggattggtcccttcgaattaatcggtccttgaattggataccaagtttt 34639208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 96 - 171
Target Start/End: Complemental strand, 43817819 - 43817744
Alignment:
Q  96 ggacccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||||||||||||||||||||| |||| |  |||| ||||| ||| | |||||||||||| ||||  ||||||||    
T  43817819 ggacccccgcaagtgggcggtggaattggtctcctcaaattaatcgattcttggatcggatgccgaactttaaaaa 43817744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 105 - 159
Target Start/End: Complemental strand, 36848811 - 36848757
Alignment:
Q  105 caagtgggcggtgggattgattccctcgaattagtcggtccttggatcggatacc 159  Q
    ||||||||||||||||||  | ||||| |||||||||||  ||||||||||||||    
T  36848811 caagtgggcggtgggattagtcccctcaaattagtcggtttttggatcggatacc 36848757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 171
Target Start/End: Complemental strand, 22200640 - 22200555
Alignment:
Q  87 gcttagaacggaccccc-gcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    |||||||||||| |||| |||||| | | || |||||| | ||||||||||| ||||||||| ||||||| ||| |||||| ||||    
T  22200640 gcttagaacggagcccctgcaagtagacagtaggattggtaccctcgaattaatcggtccttagatcggacaccaagttttcaaaa 22200555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 126 - 166
Target Start/End: Complemental strand, 9047319 - 9047279
Alignment:
Q  126 tccctcgaattagtcggtccttggatcggataccgagtttt 166  Q
    ||||| |||||||||||| ||||||||||||||||| ||||    
T  9047319 tcccttgaattagtcggttcttggatcggataccgaatttt 9047279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 99 - 171
Target Start/End: Original strand, 36094818 - 36094890
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    |||||||||||||| || ||  ||| | |||||| ||||||||||| |||||||||||||  ||||| |||||    
T  36094818 cccccgcaagtgggaggcggtgttggtcccctcggattagtcggtctttggatcggatacttagtttaaaaaa 36094890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 57; Significance: 9e-24; HSPs: 54)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 99 - 171
Target Start/End: Original strand, 3851891 - 3851963
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||||||||||||||||||||||||| |||||| |||||||| | |||||||||||||||||||||||||||    
T  3851891 cccccgcaagtgggcggtgggattgatcccctcggattagtcgattcttggatcggataccgagttttaaaaa 3851963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 99 - 171
Target Start/End: Complemental strand, 17197017 - 17196945
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||||||||||||||||||||||| | ||||||||||||||| | |||||||||||||||||||||||||||    
T  17197017 cccccgcaagtgggcggtgggattggtcccctcgaattagtcgattcttggatcggataccgagttttaaaaa 17196945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 96 - 171
Target Start/End: Original strand, 2344430 - 2344505
Alignment:
Q  96 ggacccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||||||||||||| |||||||||||| | |||||| ||||||||||||||||||||||||||||||||| ||||    
T  2344430 ggacccccgcaagtgagcggtgggattggtcccctcggattagtcggtccttggatcggataccgagttttcaaaa 2344505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 93 - 171
Target Start/End: Complemental strand, 654778 - 654700
Alignment:
Q  93 aacggacccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||| ||||||||||||||||||||||||| | |||||| |||||||||| |||||||||||||||||||||| ||||    
T  654778 aacgggcccccgcaagtgggcggtgggattggtcccctcggattagtcggttcttggatcggataccgagttttcaaaa 654700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 99 - 171
Target Start/End: Original strand, 11997983 - 11998055
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||||||||||||||||||||||| | ||||||||||||||| | |||||||||||||||||||||| ||||    
T  11997983 cccccgcaagtgggcggtgggattggtcccctcgaattagtcgattcttggatcggataccgagttttcaaaa 11998055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 99 - 171
Target Start/End: Original strand, 28647103 - 28647175
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||| ||||||||||||||||||| |||||||||||||||| |||||||||||||||| |||||||| ||||    
T  28647103 cccccacaagtgggcggtgggattggttccctcgaattagtctgtccttggatcggatatcgagtttttaaaa 28647175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 99 - 171
Target Start/End: Original strand, 29861804 - 29861876
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||||||||||||||||||||||||| ||||||||||||||| | ||| |||||||||||||||||| ||||    
T  29861804 cccccgcaagtgggcggtgggattgatcccctcgaattagtcgattcttagatcggataccgagttttcaaaa 29861876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 102 - 171
Target Start/End: Original strand, 22638425 - 22638494
Alignment:
Q  102 ccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||||||||||||||||||||||  |||||||||||||| | ||||||||||||||||||||| |||||    
T  22638425 ccgcaagtgggcggtgggattgatctcctcgaattagtcgattcttggatcggataccgagtttaaaaaa 22638494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 99 - 171
Target Start/End: Original strand, 22120022 - 22120094
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||||||||||||||||||||||| | |||||| |||||||| | |||||||||||||||||||||| ||||    
T  22120022 cccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttcaaaa 22120094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 99 - 171
Target Start/End: Complemental strand, 40542977 - 40542905
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||||||||||||||||||||||| | |||||| |||||||| | |||||||||||||||||||||| ||||    
T  40542977 cccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttcaaaa 40542905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 96 - 171
Target Start/End: Complemental strand, 7175932 - 7175857
Alignment:
Q  96 ggacccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    |||||||||||||||||||||||||||| | |||||| |||||||| | |||||||||||||| ||||||| ||||    
T  7175932 ggacccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggatactgagttttcaaaa 7175857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 99 - 166
Target Start/End: Original strand, 7275411 - 7275478
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagtttt 166  Q
    ||||||||||||||||||||||||| | |||||| |||||||| | ||||||||||||||||||||||    
T  7275411 cccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 7275478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 96 - 166
Target Start/End: Complemental strand, 31712972 - 31712902
Alignment:
Q  96 ggacccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagtttt 166  Q
    |||||| ||||||||||||||||||||| | |||||| |||||||| | ||||||||||||||||||||||    
T  31712972 ggaccctcgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 31712902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 87 - 171
Target Start/End: Complemental strand, 21574182 - 21574097
Alignment:
Q  87 gcttagaacgga-cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    |||||||||||  ||||| ||||| ||||||| ||||| | |||||| ||||||||||||||||||||||||||||||||| ||||    
T  21574182 gcttagaacggggcccccacaagtaggcggtgagattggtcccctcggattagtcggtccttggatcggataccgagttttcaaaa 21574097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 75 - 171
Target Start/End: Original strand, 47381000 - 47381096
Alignment:
Q  75 catacagagctagcttagaacggaccccc-gcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    |||||| |||| |||||||||||  || | |||||||||||||||||||| | |||| ||||||||||||||||| ||||||||| ||||||||||||    
T  47381000 catacatagcttgcttagaacggggcctctgcaagtgggcggtgggattggt-cccttgaattagtcggtccttgaatcggatactgagttttaaaaa 47381096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 99 - 171
Target Start/End: Original strand, 2751405 - 2751477
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||||||| ||||||||||||||| | |||||| |||||||| | |||||||||||||||||||||| ||||    
T  2751405 cccccgcaaatgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttcaaaa 2751477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 99 - 171
Target Start/End: Original strand, 21835285 - 21835357
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||||||||||||||||||||||| | |||||| |||||||| | ||||||||||||| |||||||| ||||    
T  21835285 cccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggatatcgagttttcaaaa 21835357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 103 - 171
Target Start/End: Original strand, 22696459 - 22696527
Alignment:
Q  103 cgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||||| ||||| ||||||| | | |||| ||||||||||||||||||||||||||||||||||||||    
T  22696459 cgcaagtaggcggcgggattggtcctctcggattagtcggtccttggatcggataccgagttttaaaaa 22696527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 99 - 171
Target Start/End: Original strand, 27312286 - 27312358
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||||||||||||||||||||||| | |||||  |||||||| | |||||||||||||||||||||| ||||    
T  27312286 cccccgcaagtgggcggtgggattggtcccctcagattagtcgattcttggatcggataccgagttttcaaaa 27312358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 96 - 171
Target Start/End: Original strand, 16374125 - 16374200
Alignment:
Q  96 ggacccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    |||||||||||| ||| ||||||||||| | |||||| |||||||| | |||||||||||||||||||||| ||||    
T  16374125 ggacccccgcaaatggacggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttcaaaa 16374200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 99 - 166
Target Start/End: Complemental strand, 21217900 - 21217833
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagtttt 166  Q
    ||||| ||||||||||||||||||||| |||||| |||||| | | ||||||||||||||||||||||    
T  21217900 cccccacaagtgggcggtgggattgatcccctcggattagttgattcttggatcggataccgagtttt 21217833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 96 - 171
Target Start/End: Original strand, 22703617 - 22703692
Alignment:
Q  96 ggacccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    |||||||||||||||||||||||||||| | |||||| |||||||| | ||| ||||||||||| |||||| ||||    
T  22703617 ggacccccgcaagtgggcggtgggattggtcccctcggattagtcgattctttgatcggatacccagttttcaaaa 22703692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 114 - 171
Target Start/End: Original strand, 7262364 - 7262421
Alignment:
Q  114 ggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    |||||||||| | |||||||||||||||| ||||| ||||||||||||||||||||||    
T  7262364 ggtgggattggtcccctcgaattagtcggcccttgaatcggataccgagttttaaaaa 7262421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 87 - 171
Target Start/End: Complemental strand, 1766223 - 1766139
Alignment:
Q  87 gcttagaacggacccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    |||||||||||  |||| |||||||||||| |||||| | |||||| |||||||||| |||| |||||||||||| ||| |||||    
T  1766223 gcttagaacggggccccacaagtgggcggttggattggtcccctcggattagtcggtacttgaatcggataccgaatttaaaaaa 1766139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 99 - 171
Target Start/End: Complemental strand, 8943468 - 8943396
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||||||||||||||||| ||||| | |||| |||||||||| | |||||||||||||| || |||||||||    
T  8943468 cccccgcaagtgggcggtgtgattggtccccttgaattagtcgattcttggatcggatactgaattttaaaaa 8943396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 87 - 171
Target Start/End: Complemental strand, 12226735 - 12226651
Alignment:
Q  87 gcttagaacggacccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    |||||||||||  || |||||||||||| ||| |||||| ||||||||||| |||||| || ||||||||| ||||||| |||||    
T  12226735 gcttagaacgggacctcgcaagtgggcgttggaattgatcccctcgaattaatcggtctttagatcggatatcgagtttaaaaaa 12226651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 99 - 171
Target Start/End: Original strand, 25333537 - 25333608
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||||||||||||| ||||||||| | |||||| |||||||| | ||||||||||| |||||||||||||||    
T  25333537 cccccgcaagtgggcagtgggattggtcccctcggattagtcgattcttggatcgga-accgagttttaaaaa 25333608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 99 - 171
Target Start/End: Original strand, 28089953 - 28090025
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    |||||||||||||||| || ||||| | |||||| |||||||| | |||||||||||||||||||||| ||||    
T  28089953 cccccgcaagtgggcgatgagattggtcccctcggattagtcgattcttggatcggataccgagttttcaaaa 28090025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 100 - 171
Target Start/End: Original strand, 10091323 - 10091393
Alignment:
Q  100 ccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    |||||||||||||||||||||||||| |||||| |||||||| | ||| |||| ||||||||||||| ||||    
T  10091323 ccccgcaagtgggcggtgggattgatcccctcggattagtcgattctt-gatccgataccgagttttcaaaa 10091393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 100 - 171
Target Start/End: Original strand, 17279666 - 17279737
Alignment:
Q  100 ccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||||||  || ||||||||||| | ||||| |||||||||||| ||||||||||||||||||||| ||||    
T  17279666 ccccgcaaacggacggtgggattggtcccctcaaattagtcggtctttggatcggataccgagttttcaaaa 17279737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 96 - 171
Target Start/End: Original strand, 27704132 - 27704207
Alignment:
Q  96 ggacccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||||||||||||||| |||| ||||||| |||||  |||||||| | |||| ||| ||||||||||||||||||    
T  27704132 ggacccccgcaagtgggtggtgtgattgatcccctcagattagtcgattcttgaatcagataccgagttttaaaaa 27704207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 96 - 166
Target Start/End: Complemental strand, 23330809 - 23330739
Alignment:
Q  96 ggacccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagtttt 166  Q
    ||||| |||||||||||||||  ||||| | ||||| ||||||||  ||||||||||||||||||||||||    
T  23330809 ggacctccgcaagtgggcggtaagattggtcccctcaaattagtcaatccttggatcggataccgagtttt 23330739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 93 - 171
Target Start/End: Complemental strand, 39145725 - 39145647
Alignment:
Q  93 aacggacccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||| |||| |||||||| ||||||||||| | ||||||||||||||| | |||| ||| |||||| |||||||||||    
T  39145725 aacgggcccctgcaagtggacggtgggattggtcccctcgaattagtcgattcttgaatcagataccaagttttaaaaa 39145647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 106 - 171
Target Start/End: Complemental strand, 674496 - 674431
Alignment:
Q  106 aagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    |||||| ||||||||||||| |||||  |||||||||||||| ||||||| ||||| |||||||||    
T  674496 aagtggacggtgggattgatcccctcagattagtcggtccttagatcggacaccgaattttaaaaa 674431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 106 - 171
Target Start/End: Original strand, 27009501 - 27009566
Alignment:
Q  106 aagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    |||||| ||||||||||| | ||||| ||||||||| | ||||||| |||||||||||||||||||    
T  27009501 aagtggacggtgggattggtcccctcaaattagtcgattcttggattggataccgagttttaaaaa 27009566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 102 - 171
Target Start/End: Original strand, 31274050 - 31274119
Alignment:
Q  102 ccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    |||||||||||| ||| ||||| | ||||||||||||||| | |||||| ||||||||||||||| ||||    
T  31274050 ccgcaagtgggcagtgagattggtcccctcgaattagtcgattcttggaccggataccgagttttcaaaa 31274119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 99 - 171
Target Start/End: Original strand, 18044241 - 18044313
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||| |||||||| ||||| |||| | |||||  |||||||| | |||||||||||||||||||||||||||    
T  18044241 cccccacaagtgggtggtggaattggtcccctcagattagtcgattcttggatcggataccgagttttaaaaa 18044313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 99 - 171
Target Start/End: Original strand, 23092230 - 23092302
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||||||| ||| ||||||||||| | |||||| |||||||| | | |||||||||||||||||||| ||||    
T  23092230 cccccgcaaatggacggtgggattggtcccctcggattagtcgattcatggatcggataccgagttttcaaaa 23092302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 103 - 171
Target Start/End: Original strand, 28951009 - 28951077
Alignment:
Q  103 cgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||||| ||||||||||||| | |||||||| ||| |  | |||||||||||||||||||||||||||    
T  28951009 cgcaagtcggcggtgggattggtcccctcgaactagacaattcttggatcggataccgagttttaaaaa 28951077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 99 - 171
Target Start/End: Original strand, 31197724 - 31197796
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||||||||||| ||||||||||| | |||||  |||||||| | ||||||||||||| |||||||| ||||    
T  31197724 cccccgcaagtggtcggtgggattggtcccctcagattagtcgattcttggatcggatatcgagttttcaaaa 31197796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 99 - 171
Target Start/End: Complemental strand, 41907580 - 41907509
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    |||||||||||||| |||||||||| | |||  || ||||||| | |||||||||||||||||||||||||||    
T  41907580 cccccgcaagtgggtggtgggattggtcccccaga-ttagtcgattcttggatcggataccgagttttaaaaa 41907509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 99 - 171
Target Start/End: Complemental strand, 42913580 - 42913508
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||||||||||| ||||||||||| | |||||| |||||| | | ||| |||||||||||||||||| ||||    
T  42913580 cccccgcaagtggacggtgggattggtcccctcggattagttgattcttagatcggataccgagttttcaaaa 42913508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 106 - 171
Target Start/End: Original strand, 32849732 - 32849797
Alignment:
Q  106 aagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    |||||||| ||||||||| | |||||  |||||||| | ||||||||||||||||||||| |||||    
T  32849732 aagtgggcagtgggattggtcccctcagattagtcgattcttggatcggataccgagtttaaaaaa 32849797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 101 - 154
Target Start/End: Original strand, 37056341 - 37056394
Alignment:
Q  101 cccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcgg 154  Q
    ||||||||||||| ||||||||| | || |||||| ||||||||||||||||||    
T  37056341 cccgcaagtgggctgtgggattggtcccatcgaatcagtcggtccttggatcgg 37056394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 99 - 171
Target Start/End: Original strand, 2103189 - 2103259
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    |||||||||||||||||||||||||  ||||||| |||||||| | | | |||||||||||||||||| ||||    
T  2103189 cccccgcaagtgggcggtgggattg-gtccctcggattagtcgattcat-gatcggataccgagttttcaaaa 2103259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 99 - 171
Target Start/End: Complemental strand, 23012575 - 23012503
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||| ||||||||||||||||||| | |||||| |||||||  | | | |||||||||||||||||| ||||    
T  23012575 cccccacaagtgggcggtgggattggtcccctcgtattagtcaattcattgatcggataccgagttttcaaaa 23012503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 105 - 171
Target Start/End: Complemental strand, 11910015 - 11909949
Alignment:
Q  105 caagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||||| ||||||||||| | | ||||||||||||| |||||| ||  |||| |||||||||||||    
T  11910015 caagtggacggtgggattggtcctctcgaattagtcgatccttgaattagatatcgagttttaaaaa 11909949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 105 - 171
Target Start/End: Original strand, 19421371 - 19421437
Alignment:
Q  105 caagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||||||||||||||||| |  ||||| |||||||| | |||| ||| |||||||||||| |||||    
T  19421371 caagtgggcggtgggattggtctcctcggattagtcgattcttgaatcagataccgagtttaaaaaa 19421437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 104 - 166
Target Start/End: Complemental strand, 33137887 - 33137825
Alignment:
Q  104 gcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagtttt 166  Q
    ||||||||||||||  |||| | ||||||||||||||| | ||| ||||||||| ||||||||    
T  33137887 gcaagtgggcggtgaaattggtcccctcgaattagtcgattcttagatcggatatcgagtttt 33137825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 113 - 166
Target Start/End: Original strand, 9769732 - 9769785
Alignment:
Q  113 cggtgggattgattccctcgaattagtcggtccttggatcggataccgagtttt 166  Q
    ||||||||||| | |||| ||||||||||||||||| | || ||||||||||||    
T  9769732 cggtgggattggtccccttgaattagtcggtccttgaaccgaataccgagtttt 9769785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 103 - 168
Target Start/End: Complemental strand, 12211598 - 12211533
Alignment:
Q  103 cgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaa 168  Q
    |||||||||||||| ||||||   |||||  ||||||||||||||| ||  |||||||||||||||    
T  12211598 cgcaagtgggcggtaggattgggcccctctgattagtcggtccttgaattagataccgagttttaa 12211533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 164
Target Start/End: Complemental strand, 30345564 - 30345511
Alignment:
Q  111 ggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagtt 164  Q
    ||||||||||||| | ||||||  ||||||||| ||| ||||||||||||||||    
T  30345564 ggcggtgggattggtcccctcgggttagtcggttcttagatcggataccgagtt 30345511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 107 - 171
Target Start/End: Complemental strand, 36772362 - 36772298
Alignment:
Q  107 agtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    |||||||||||| |||  | | |||| |||||||| | ||| |||||||||||||||||||||||    
T  36772362 agtgggcggtggaattagtcctctcggattagtcgattctttgatcggataccgagttttaaaaa 36772298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 103 - 171
Target Start/End: Complemental strand, 38373043 - 38372975
Alignment:
Q  103 cgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||||||| |||||||||||   |||| | |||||||||||||||| || ||||| ||||||| ||||    
T  38373043 cgcaagtggacggtgggattggaccccttggattagtcggtccttgggtcagatactgagttttcaaaa 38372975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 57; Significance: 9e-24; HSPs: 57)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 99 - 171
Target Start/End: Complemental strand, 32059507 - 32059435
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||||||||||||||||||||||| | |||||| ||||||||||||||||||||||||||||||||| ||||    
T  32059507 cccccgcaagtgggcggtgggattggtcccctcggattagtcggtccttggatcggataccgagttttcaaaa 32059435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 99 - 171
Target Start/End: Complemental strand, 19145479 - 19145407
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||||||||||||||||||||||| | |||||| |||||| ||| |||||||||||||||||||||||||||    
T  19145479 cccccgcaagtgggcggtgggattggtcccctcggattagttggttcttggatcggataccgagttttaaaaa 19145407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 99 - 171
Target Start/End: Original strand, 22693065 - 22693137
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||||||||||||||||||||||| | |||||| |||||||| | |||||||||||||||||||||||||||    
T  22693065 cccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttaaaaa 22693137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 99 - 170
Target Start/End: Complemental strand, 13038522 - 13038451
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaa 170  Q
    ||||||||||||||||||||||||||| ||||||||||||||| | |||||||||||||| || ||||||||    
T  13038522 cccccgcaagtgggcggtgggattgatcccctcgaattagtcgattcttggatcggatactgaattttaaaa 13038451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 96 - 170
Target Start/End: Complemental strand, 13659315 - 13659241
Alignment:
Q  96 ggacccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaa 170  Q
    |||||||||||||||||||||||||||||| |||||| |||| ||| | ||||||||||||||||| ||||||||    
T  13659315 ggacccccgcaagtgggcggtgggattgatcccctcggattaatcgattcttggatcggataccgaattttaaaa 13659241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 102 - 171
Target Start/End: Original strand, 36895558 - 36895627
Alignment:
Q  102 ccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    |||||||||||||| ||||||| |  |||||||||||||||| |||||||||||||||||||||||||||    
T  36895558 ccgcaagtgggcggggggattgttctcctcgaattagtcggttcttggatcggataccgagttttaaaaa 36895627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 99 - 171
Target Start/End: Original strand, 4603907 - 4603979
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    |||| |||||||| ||||||||||| | |||||| ||||||||||||||||||||||||||||||||| ||||    
T  4603907 cccctgcaagtggacggtgggattggtcccctcggattagtcggtccttggatcggataccgagttttcaaaa 4603979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 99 - 171
Target Start/End: Complemental strand, 8484728 - 8484656
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||||||||||||||||||||||| | |||||| |||||||| | |||||||||||||||||||||| ||||    
T  8484728 cccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttcaaaa 8484656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 99 - 171
Target Start/End: Complemental strand, 11926568 - 11926496
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    |||||||||||||| |||||||||| | |||||| |||||||| | |||||||||||||||||||||||||||    
T  11926568 cccccgcaagtgggtggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttaaaaa 11926496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 99 - 171
Target Start/End: Complemental strand, 13108517 - 13108445
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||||||||||||||||||||||||| ||||||||||||||| | |||||||||||||| || ||| |||||    
T  13108517 cccccgcaagtgggcggtgggattgatcccctcgaattagtcgattcttggatcggatactgaatttaaaaaa 13108445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 99 - 171
Target Start/End: Original strand, 18207337 - 18207409
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||||||||||||||||||||||| | |||||| |||||||| | |||||||||||||||||||||| ||||    
T  18207337 cccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttcaaaa 18207409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 99 - 171
Target Start/End: Complemental strand, 27498798 - 27498726
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||||||||||||||||||||||| | |||||| |||||||| | |||||||||||||||||||||| ||||    
T  27498798 cccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttcaaaa 27498726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 99 - 171
Target Start/End: Complemental strand, 31288013 - 31287941
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||||||||||||||||||||||| |  |||||||||||||||| |||||| ||||||||||||||| ||||    
T  31288013 cccccgcaagtgggcggtgggattggtctcctcgaattagtcggttcttggaccggataccgagttttcaaaa 31287941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 100 - 171
Target Start/End: Complemental strand, 19456277 - 19456206
Alignment:
Q  100 ccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    |||||||||||||||||||||||| | |||||| |||||||| | |||||||||||||||||||||| ||||    
T  19456277 ccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttcaaaa 19456206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 101 - 171
Target Start/End: Original strand, 37495186 - 37495256
Alignment:
Q  101 cccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||||||||||||||||||||| | |||||| |||||||| | |||||||||||||||||||||| ||||    
T  37495186 cccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttcaaaa 37495256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 102 - 171
Target Start/End: Complemental strand, 10869629 - 10869560
Alignment:
Q  102 ccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    |||||||||||||||||||||| | |||||| |||||||||| ||||||||||||||| |||||| ||||    
T  10869629 ccgcaagtgggcggtgggattggtcccctcggattagtcggttcttggatcggataccaagttttcaaaa 10869560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 102 - 171
Target Start/End: Complemental strand, 41351168 - 41351099
Alignment:
Q  102 ccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    |||||||||||||||||||||| | |||||| |||||||| | |||||||||||||||||||||| ||||    
T  41351168 ccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttcaaaa 41351099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 99 - 171
Target Start/End: Original strand, 30485958 - 30486030
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||||||||||||||||||||||| | |||||| |||||||  | |||||||||||||||||||||| ||||    
T  30485958 cccccgcaagtgggcggtgggattggtcccctcggattagtcaattcttggatcggataccgagttttcaaaa 30486030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 99 - 171
Target Start/End: Complemental strand, 38631046 - 38630974
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||||||||||||||||||||||| | |||||| |||| ||| | |||||||||||||||||||||| ||||    
T  38631046 cccccgcaagtgggcggtgggattggtcccctcggattaatcgattcttggatcggataccgagttttcaaaa 38630974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 96 - 171
Target Start/End: Complemental strand, 33709573 - 33709498
Alignment:
Q  96 ggacccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    |||||||| ||||||||||||||||||| | |||||| |||||||| | |||||||||||||||| ||||| ||||    
T  33709573 ggacccccacaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgtgttttcaaaa 33709498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 96 - 171
Target Start/End: Original strand, 34310269 - 34310344
Alignment:
Q  96 ggacccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||||||  |||||| ||||||||||| | ||||||||||| ||| | |||||||||||||||||||||||||||    
T  34310269 ggacccccataagtggacggtgggattggtcccctcgaattaatcgattcttggatcggataccgagttttaaaaa 34310344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 100 - 166
Target Start/End: Complemental strand, 7085692 - 7085626
Alignment:
Q  100 ccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagtttt 166  Q
    |||||||||||||||||||||||| | |||||| |||||||| | |||| |||||||||||||||||    
T  7085692 ccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttgaatcggataccgagtttt 7085626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 104 - 170
Target Start/End: Complemental strand, 27487616 - 27487550
Alignment:
Q  104 gcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaa 170  Q
    |||||||||||||||||||| | |||||| |||||||| | |||||||||||||| |||||||||||    
T  27487616 gcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggatacagagttttaaaa 27487550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 93 - 171
Target Start/End: Original strand, 38684331 - 38684409
Alignment:
Q  93 aacggacccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||| |||||||||||| |||||||||||| | |||||| |||||||| | ||||||||||||||||| |||| ||||    
T  38684331 aacgggcccccgcaagtgagcggtgggattggtcccctcggattagtcgattcttggatcggataccgatttttcaaaa 38684409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 100 - 161
Target Start/End: Complemental strand, 11464974 - 11464913
Alignment:
Q  100 ccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccga 161  Q
    ||||||||||||| |||||||||| | ||||||||||||||| | |||||||||||||||||    
T  11464974 ccccgcaagtgggtggtgggattggtcccctcgaattagtcgattcttggatcggataccga 11464913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 103 - 171
Target Start/End: Complemental strand, 930549 - 930481
Alignment:
Q  103 cgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||||||| | ||| ||||| | |||||| |||||||||||||||||||||||| |||||||||||||    
T  930549 cgcaagtggacagtgtgattggtcccctcggattagtcggtccttggatcggatatcgagttttaaaaa 930481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 103 - 171
Target Start/End: Complemental strand, 6014343 - 6014275
Alignment:
Q  103 cgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||||||||||||| ||||  | ||||||||||||||| | ||||||||||||| |||||||||||||    
T  6014343 cgcaagtgggcggtgagattagtcccctcgaattagtcgattcttggatcggatatcgagttttaaaaa 6014275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 99 - 171
Target Start/End: Complemental strand, 15641172 - 15641101
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||||||||||||||||||||||| | |||||| |||||||| | ||| |||||||||||||||||| ||||    
T  15641172 cccccgcaagtgggcggtgggattggtcccctcggattagtcgattctt-gatcggataccgagttttcaaaa 15641101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 99 - 171
Target Start/End: Original strand, 35425143 - 35425215
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||||||||||||||||||||||| | | |||| |||||||| | ||||||||||||||||| |||| ||||    
T  35425143 cccccgcaagtgggcggtgggattggtcctctcggattagtcgattcttggatcggataccgaattttcaaaa 35425215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 104 - 171
Target Start/End: Complemental strand, 24158228 - 24158161
Alignment:
Q  104 gcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    |||||||||||||| ||||| | |||||  ||||||||||||||| |||||||||||| |||||||||    
T  24158228 gcaagtgggcggtgagattggtcccctcagattagtcggtccttgaatcggataccgaattttaaaaa 24158161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 101 - 171
Target Start/End: Original strand, 22648154 - 22648224
Alignment:
Q  101 cccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||||||||   |||||||||||| |||||  ||||||||||| |||||||||||||||||||| |||||    
T  22648154 cccgcaagtgaatggtgggattgatcccctcagattagtcggtctttggatcggataccgagtttaaaaaa 22648224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 113 - 171
Target Start/End: Complemental strand, 28614539 - 28614481
Alignment:
Q  113 cggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||||||||||| ||||||||||||||| |  ||||||||||||||||||||| ||||    
T  28614539 cggtgggattgatcccctcgaattagtcgatttttggatcggataccgagtttttaaaa 28614481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 99 - 171
Target Start/End: Complemental strand, 9659378 - 9659306
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||||||||||| ||||||||||| | || ||| |||||| | | ||||||| |||||||||||||||||||    
T  9659378 cccccgcaagtggacggtgggattggtcccttcggattagttgattcttggatgggataccgagttttaaaaa 9659306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 99 - 171
Target Start/End: Complemental strand, 12317221 - 12317150
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    |||||||||||||| ||||||||||| ||||||| |||||||  | ||| |||||||||||||||||| ||||    
T  12317221 cccccgcaagtgggtggtgggattga-tccctcggattagtcaattcttagatcggataccgagttttcaaaa 12317150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 99 - 171
Target Start/End: Complemental strand, 12398515 - 12398443
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||||||| ||| ||||| ||||||| | ||| ||||||||||| ||||||| |||||||||||||| ||||    
T  12398515 cccccgcaaatggacggtgagattgatcctctcaaattagtcggttcttggattggataccgagttttcaaaa 12398443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 99 - 171
Target Start/End: Original strand, 22392818 - 22392890
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    |||||||||||||||||||| |||| | |||||  |||||||| |  ||||||||||||||||||||| ||||    
T  22392818 cccccgcaagtgggcggtggaattggtcccctcagattagtcgatttttggatcggataccgagttttcaaaa 22392890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 106 - 166
Target Start/End: Original strand, 41084120 - 41084180
Alignment:
Q  106 aagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagtttt 166  Q
    ||||||||||| |||||||| || ||| |||||||||| |||| |||||||||||||||||    
T  41084120 aagtgggcggtaggattgatcccttcggattagtcggttcttgaatcggataccgagtttt 41084180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 100 - 171
Target Start/End: Original strand, 5067392 - 5067463
Alignment:
Q  100 ccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    |||||||||||||||||||||||| | |||||  |||||||| | ||||||||||| | ||| |||||||||    
T  5067392 ccccgcaagtgggcggtgggattggtcccctctgattagtcgattcttggatcggagatcgaattttaaaaa 5067463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 99 - 166
Target Start/End: Complemental strand, 21236429 - 21236362
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagtttt 166  Q
    ||||||||||||||||||||||||  | |||||  |||||||| | |||| |||||||||||||||||    
T  21236429 cccccgcaagtgggcggtgggattagtcccctcagattagtcgattcttgaatcggataccgagtttt 21236362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 105 - 171
Target Start/End: Original strand, 10837432 - 10837498
Alignment:
Q  105 caagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    |||| |||||||| ||||| | |||||  |||||| ||||||| |||||||||||||||||||||||    
T  10837432 caagggggcggtgagattggtcccctcagattagttggtccttagatcggataccgagttttaaaaa 10837498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 96 - 166
Target Start/End: Original strand, 31206370 - 31206440
Alignment:
Q  96 ggacccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagtttt 166  Q
    |||||||| ||||||| |||||||||||    ||||| ||||||||||||||||  |||||||||||||||    
T  31206370 ggacccccacaagtggacggtgggattggactcctcggattagtcggtccttgggccggataccgagtttt 31206440  T

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Target: chr5; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 101 - 171
Target Start/End: Original strand, 37972915 - 37972985
Alignment:
Q  101 cccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||||||||||| ||| ||||||| ||||||||||| |||  |||| ||||| |||||||||||| ||||    
T  37972915 cccgcaagtgggcagtgagattgatcccctcgaattaatcgacccttagatcgaataccgagttttcaaaa 37972985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 93 - 166
Target Start/End: Original strand, 5049260 - 5049333
Alignment:
Q  93 aacggacccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagtttt 166  Q
    ||||| ||||||||| ||| ||||||||||| | || |||||||||||| | ||||||||| ||||| ||||||    
T  5049260 aacgggcccccgcaaatggacggtgggattggtcccatcgaattagtcgattcttggatcgaataccaagtttt 5049333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 115 - 171
Target Start/End: Complemental strand, 10631340 - 10631284
Alignment:
Q  115 gtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||||||| | |||||| |||||||| | |||||||||||||||||||||| ||||    
T  10631340 gtgggattggtcccctcggattagtcgattcttggatcggataccgagttttcaaaa 10631284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 99 - 171
Target Start/End: Complemental strand, 23270589 - 23270517
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||||||| ||| ||||||||||| | |||||| |||||| | | ||||||| ||||||| |||||||||||    
T  23270589 cccccgcaaatggacggtgggattggtcccctcggattagttgattcttggattggataccaagttttaaaaa 23270517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 84 - 171
Target Start/End: Original strand, 25343355 - 25343442
Alignment:
Q  84 ctagcttagaacggacccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    |||||||||||||| |||  ||||||||||| || ||||||  ||||| ||||||||| |||||  || | ||||||||||| |||||    
T  25343355 ctagcttagaacgggcccttgcaagtgggcgatgagattgaacccctcaaattagtcgatccttaaattgaataccgagtttaaaaaa 25343442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 101 - 159
Target Start/End: Original strand, 8780594 - 8780652
Alignment:
Q  101 cccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggatacc 159  Q
    ||||||||||| ||||| ||||||| || || |||||||| |||||| |||||||||||    
T  8780594 cccgcaagtggacggtgagattgatcccatcaaattagtcagtccttagatcggatacc 8780652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 101 - 171
Target Start/End: Complemental strand, 25548599 - 25548529
Alignment:
Q  101 cccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    |||||||||  |||||||||||| |   ||||||||||||| | ||||||||| |||||||||||| ||||    
T  25548599 cccgcaagtacgcggtgggattggtcatctcgaattagtcgattcttggatcgaataccgagttttcaaaa 25548529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 105 - 171
Target Start/End: Complemental strand, 25750674 - 25750608
Alignment:
Q  105 caagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    |||||||| |||| ||||| | || ||  |||||||| | |||||||||||||||||||||||||||    
T  25750674 caagtggggggtgagattggtcccttcagattagtcgattcttggatcggataccgagttttaaaaa 25750608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 171
Target Start/End: Original strand, 10399903 - 10399976
Alignment:
Q  99 cccccgcaagtgggcggtgggattgatt-ccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    |||||| |||||| ||||||||||| |  ||||||||||||||| | ||||||||  ||| |||||||||||||    
T  10399903 cccccgtaagtggacggtgggattggtcaccctcgaattagtcgattcttggatcaaatagcgagttttaaaaa 10399976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 96 - 137
Target Start/End: Complemental strand, 15971192 - 15971151
Alignment:
Q  96 ggacccccgcaagtgggcggtgggattgattccctcgaatta 137  Q
    |||||||||||||||||||||| ||||||| |||||| ||||    
T  15971192 ggacccccgcaagtgggcggtgagattgatcccctcggatta 15971151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 113 - 158
Target Start/End: Original strand, 43244586 - 43244631
Alignment:
Q  113 cggtgggattgattccctcgaattagtcggtccttggatcggatac 158  Q
    ||||||||||| ||||||| |||| ||||||| |||||||||||||    
T  43244586 cggtgggattggttccctcaaatttgtcggtcattggatcggatac 43244631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 139 - 171
Target Start/End: Original strand, 15115694 - 15115726
Alignment:
Q  139 tcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||||||||||||||||||||||||| |||||    
T  15115694 tcggtccttggatcggataccgagtttaaaaaa 15115726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 134 - 166
Target Start/End: Complemental strand, 21377281 - 21377249
Alignment:
Q  134 attagtcggtccttggatcggataccgagtttt 166  Q
    ||||||||||| |||||||||||||||||||||    
T  21377281 attagtcggtctttggatcggataccgagtttt 21377249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 99 - 171
Target Start/End: Complemental strand, 26009331 - 26009259
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||||||||||||  ||||||||  | |||||| |||||||||| |||| |||| ||| |||||||| ||||    
T  26009331 cccccgcaagtgggtagtgggattagtcccctcggattagtcggttcttgaatcgaatatcgagttttcaaaa 26009259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 134 - 166
Target Start/End: Complemental strand, 32340251 - 32340219
Alignment:
Q  134 attagtcggtccttggatcggataccgagtttt 166  Q
    ||||||||||||||||| |||||||||||||||    
T  32340251 attagtcggtccttggaccggataccgagtttt 32340219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 99 - 171
Target Start/End: Original strand, 34049941 - 34050013
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||||||||||| |||| |||||| | |||||| |||||| | | ||   ||||||||||||||||||||||    
T  34049941 cccccgcaagtggtcggtaggattggtcccctcggattagttgattctcaaatcggataccgagttttaaaaa 34050013  T

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Target: chr2 (Bit Score: 57; Significance: 9e-24; HSPs: 47)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 87 - 171
Target Start/End: Complemental strand, 8192431 - 8192347
Alignment:
Q  87 gcttagaacggacccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||||||||| ||| |||||||||||||||||||||   |||||| ||||||||||||||||||||||||||||||||| ||||    
T  8192431 gcttagaacggcccctcgcaagtgggcggtgggattgggcccctcggattagtcggtccttggatcggataccgagttttcaaaa 8192347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 87 - 171
Target Start/End: Original strand, 19174880 - 19174964
Alignment:
Q  87 gcttagaacggacccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    |||||||||||| ||||| || ||||||||||||||||| |||||| |||| ||||||||||||||||||||||| |||||||||    
T  19174880 gcttagaacggagccccgtaaatgggcggtgggattgatcccctcggattaatcggtccttggatcggataccgaattttaaaaa 19174964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 96 - 171
Target Start/End: Complemental strand, 11941280 - 11941205
Alignment:
Q  96 ggacccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    |||||||||||||||||||||||||||| | |||||| |||||||| | |||||||||||||||||||||||||||    
T  11941280 ggacccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttaaaaa 11941205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 86 - 171
Target Start/End: Original strand, 14486941 - 14487027
Alignment:
Q  86 agcttagaacggaccccc-gcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||||||||||  |||| |||||||||||||||||||| | |||||| ||||||||||||||||||||||||||||||||| ||||    
T  14486941 agcttagaacggggcccctgcaagtgggcggtgggattggtcccctcggattagtcggtccttggatcggataccgagttttcaaaa 14487027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 96 - 171
Target Start/End: Complemental strand, 44929916 - 44929841
Alignment:
Q  96 ggacccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    |||||||||||||||| ||||||||||| | |||| |||||||||| | |||||||||||||||||||||||||||    
T  44929916 ggacccccgcaagtggacggtgggattggtccccttgaattagtcgattcttggatcggataccgagttttaaaaa 44929841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 99 - 171
Target Start/End: Original strand, 25293289 - 25293361
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    |||||||||||||||| |||||||| | |||||| |||||||| | |||||||||||||||||||||||||||    
T  25293289 cccccgcaagtgggcgatgggattggtcccctcggattagtcgattcttggatcggataccgagttttaaaaa 25293361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 99 - 171
Target Start/End: Complemental strand, 44946120 - 44946048
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||||||||||||||||||||||| | |||||| |||||||| | |||||||||||||||||||||| ||||    
T  44946120 cccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttcaaaa 44946048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 96 - 171
Target Start/End: Original strand, 18692087 - 18692162
Alignment:
Q  96 ggacccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    |||||||| ||||||||||||||||||| | |||||| |||||||| | |||||||||||||||||||||| ||||    
T  18692087 ggacccccacaagtgggcggtgggattggtcccctcgtattagtcgattcttggatcggataccgagttttcaaaa 18692162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 100 - 166
Target Start/End: Complemental strand, 18976521 - 18976455
Alignment:
Q  100 ccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagtttt 166  Q
    |||||||||||||||||||||||| | ||||||||||||||| | ||||||||||||||||| ||||    
T  18976521 ccccgcaagtgggcggtgggattggtcccctcgaattagtcgattcttggatcggataccgaatttt 18976455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 101 - 166
Target Start/End: Complemental strand, 27269409 - 27269344
Alignment:
Q  101 cccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagtttt 166  Q
    ||||||||||||||||||||||||| |||||| |||||||| | ||||||| ||||||||||||||    
T  27269409 cccgcaagtgggcggtgggattgatcccctcggattagtcgattcttggataggataccgagtttt 27269344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 99 - 171
Target Start/End: Complemental strand, 2140553 - 2140481
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||||||||||||||||||||||| | |||||| |||||||| |  ||||||||||||||||||||| ||||    
T  2140553 cccccgcaagtgggcggtgggattggtcccctcggattagtcgattattggatcggataccgagttttcaaaa 2140481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 99 - 171
Target Start/End: Original strand, 15038089 - 15038161
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||||||||||||||||||||||| | |||||  |||||||| | |||||||||||||||||||||| ||||    
T  15038089 cccccgcaagtgggcggtgggattggtcccctcagattagtcgattcttggatcggataccgagttttcaaaa 15038161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 99 - 171
Target Start/End: Complemental strand, 30466897 - 30466825
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||||||||||||| ||||||||| | || ||| |||||||| | |||||||||||||||||||||||||||    
T  30466897 cccccgcaagtgggcagtgggattggtcccttcggattagtcgattcttggatcggataccgagttttaaaaa 30466825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 99 - 171
Target Start/End: Original strand, 35171930 - 35172002
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||||||||||||||||||||||| | |||||| |||||||| | |||| ||||||||||||||||| ||||    
T  35171930 cccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttgaatcggataccgagttttcaaaa 35172002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 84 - 171
Target Start/End: Original strand, 12543258 - 12543345
Alignment:
Q  84 ctagcttagaacggacccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    |||| |||||| || |||||||||||||  |||||||||| | |||| ||||||||||||||||| |||||| ||||||||| |||||    
T  12543258 ctagtttagaaagggcccccgcaagtggatggtgggattgctccccttgaattagtcggtccttgaatcggagaccgagtttaaaaaa 12543345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 96 - 171
Target Start/End: Complemental strand, 33827643 - 33827568
Alignment:
Q  96 ggacccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||||| |||||||||||||||||||| | |||| | |||||||| | |||||||||||||||||||||| ||||    
T  33827643 ggacccctgcaagtgggcggtgggattggtccccttggattagtcgattcttggatcggataccgagttttcaaaa 33827568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 86 - 171
Target Start/End: Complemental strand, 28194219 - 28194133
Alignment:
Q  86 agcttagaacgga-cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||||||||||  ||||||||||| ||||||||||||| |  | ||  ||||||||||||||||||||||||||||||||| ||||    
T  28194219 agcttagaacggggcccccgcaagtaggcggtgggattggtctcgtcagattagtcggtccttggatcggataccgagttttcaaaa 28194133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 93 - 171
Target Start/End: Complemental strand, 34516487 - 34516409
Alignment:
Q  93 aacggacccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||| |||| |||||||||||||||||||| | |||||| |||||||| | ||||||||||||||| |||||| ||||    
T  34516487 aacgggcccctgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccaagttttcaaaa 34516409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 102 - 171
Target Start/End: Original strand, 39957891 - 39957960
Alignment:
Q  102 ccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||||||||||| |||||||| |||||||| |||||||| | ||||||| |||||||||||||| ||||    
T  39957891 ccgcaagtgggcgatgggattggttccctcggattagtcgattcttggattggataccgagttttcaaaa 39957960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 99 - 171
Target Start/End: Original strand, 19054156 - 19054228
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||||||||||||||||||||||| | | |||| |||||||| | |||||||| ||||||||||||| ||||    
T  19054156 cccccgcaagtgggcggtgggattggtccgctcggattagtcgattcttggatcagataccgagttttcaaaa 19054228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 99 - 171
Target Start/End: Original strand, 28669003 - 28669075
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||| ||||||||||||||||||| | |||||| |||||||| |  ||||||||||||||||||||| ||||    
T  28669003 cccccacaagtgggcggtgggattggtcccctcggattagtcgatttttggatcggataccgagttttcaaaa 28669075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 99 - 171
Target Start/End: Original strand, 41329972 - 41330044
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||| ||||||||||||| ||||| | |||||  |||||||||| |||||| ||||||||||||||||||||    
T  41329972 cccccacaagtgggcggtgagattggtcccctcagattagtcggttcttggaccggataccgagttttaaaaa 41330044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 99 - 171
Target Start/End: Complemental strand, 43374397 - 43374325
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    |||||||||||| |||||||||||| | || ||| |||||||| | |||||||||||||||||||||| ||||    
T  43374397 cccccgcaagtgagcggtgggattggtcccttcggattagtcgattcttggatcggataccgagttttcaaaa 43374325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 88 - 171
Target Start/End: Complemental strand, 13599403 - 13599320
Alignment:
Q  88 cttagaacggacccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||||||||  |||||||||||| ||||| ||||||| |||||  |||||| |||| |||||||||||||||| |||| ||||    
T  13599403 cttagaacggggccccgcaagtggacggtgagattgatcccctcatattagtgggtcattggatcggataccgaatttttaaaa 13599320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 96 - 166
Target Start/End: Complemental strand, 36390638 - 36390569
Alignment:
Q  96 ggacccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagtttt 166  Q
    ||||||||||||||||||||||||||||  ||||||| || ||||| | |||| |||||||||||||||||    
T  36390638 ggacccccgcaagtgggcggtgggattg-gtccctcggatcagtcgatacttgaatcggataccgagtttt 36390569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 102 - 171
Target Start/End: Original strand, 5394150 - 5394219
Alignment:
Q  102 ccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    |||||||||||||||||||||| | |  ||| |||||||||||||| ||||||||||||| |||| ||||    
T  5394150 ccgcaagtgggcggtgggattggtccgttcggattagtcggtccttagatcggataccgaattttcaaaa 5394219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 99 - 171
Target Start/End: Original strand, 8259027 - 8259099
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||||||||| ||||||||||||  |||| ||| |||||||| | |||||||||||||| ||||||| ||||    
T  8259027 cccccgcaagtaggcggtgggattagttccttcggattagtcgattcttggatcggatactgagttttcaaaa 8259099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 99 - 171
Target Start/End: Complemental strand, 9401028 - 9400956
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||||||||||||| ||||||||| || |||   |||||||| | |||||||||||||| ||||||||||||    
T  9401028 cccccgcaagtgggcagtgggattggtttccttagattagtcgattcttggatcggatactgagttttaaaaa 9400956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 100 - 171
Target Start/End: Original strand, 24196133 - 24196204
Alignment:
Q  100 ccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    |||||||||||||||||||||||| | |||||| |||||||| |  || ||| |||||||||||||| ||||    
T  24196133 ccccgcaagtgggcggtgggattggtcccctcggattagtcgattttttgattggataccgagttttcaaaa 24196204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 136 - 171
Target Start/End: Original strand, 31175720 - 31175755
Alignment:
Q  136 tagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||||||||||||||||||||||||||||||||||    
T  31175720 tagtcggtccttggatcggataccgagttttaaaaa 31175755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 100 - 159
Target Start/End: Complemental strand, 36242378 - 36242319
Alignment:
Q  100 ccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggatacc 159  Q
    |||||||||||||||||||||||| | |||||| |||| ||| | |||||||||||||||    
T  36242378 ccccgcaagtgggcggtgggattggtcccctcggattaatcgattcttggatcggatacc 36242319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 99 - 166
Target Start/End: Original strand, 44610169 - 44610236
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagtttt 166  Q
    |||| |||||||||||||||||||| | || ||| |||||||||| |||||| || ||||||||||||    
T  44610169 cccctgcaagtgggcggtgggattggtcccatcggattagtcggttcttggaccgaataccgagtttt 44610236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 101 - 171
Target Start/End: Original strand, 3943872 - 3943942
Alignment:
Q  101 cccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    |||||||||||| |||||||||| | |||| | ||||||||||  |||||||||||||| |||||| ||||    
T  3943872 cccgcaagtgggtggtgggattggtccccttggattagtcggttattggatcggataccaagttttcaaaa 3943942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 96 - 166
Target Start/End: Complemental strand, 6714365 - 6714295
Alignment:
Q  96 ggacccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagtttt 166  Q
    |||| ||||||||||| ||||| ||||| | ||||| ||||||||| | ||||||| ||||||||||||||    
T  6714365 ggactcccgcaagtggacggtgagattggtcccctcaaattagtcgattcttggattggataccgagtttt 6714295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 105 - 171
Target Start/End: Complemental strand, 19605907 - 19605841
Alignment:
Q  105 caagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||||||||||| ||||| | ||||||||||||| |   ||||||||||||| |||||||||||||    
T  19605907 caagtgggcggtgagattggtcccctcgaattagttgacacttggatcggatatcgagttttaaaaa 19605841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 93 - 171
Target Start/End: Original strand, 29361672 - 29361750
Alignment:
Q  93 aacggacccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    |||||| |||||||||||||| |||||||||||  ||||| |||| | | | | ||||||||||| |||||||||||||    
T  29361672 aacggagccccgcaagtgggcagtgggattgatctcctcggattaattgattcctggatcggatatcgagttttaaaaa 29361750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 104 - 165
Target Start/End: Complemental strand, 31439457 - 31439396
Alignment:
Q  104 gcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttt 165  Q
    |||||| ||||||||||||  ||||||| ||||| ||||||||| |||| ||||||||||||    
T  31439457 gcaagtaggcggtgggatttgttccctcaaattaatcggtccttagatcagataccgagttt 31439396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 99 - 171
Target Start/End: Original strand, 17324895 - 17324966
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||| ||||||||||||||||||  | ||||| ||||||||| | ||| ||||||||| |||||||||||||    
T  17324895 cccccacaagtgggcggtgggattagtcccctcaaattagtcgattctt-gatcggatatcgagttttaaaaa 17324966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 100 - 168
Target Start/End: Original strand, 29698277 - 29698345
Alignment:
Q  100 ccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaa 168  Q
    |||||||| |||||| || ||||| | ||||||||| ||| ||||||| ||||| ||||||||||||||    
T  29698277 ccccgcaaatgggcgatgagattggtcccctcgaataagttggtccttagatcgtataccgagttttaa 29698345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 100 - 171
Target Start/End: Original strand, 4852660 - 4852731
Alignment:
Q  100 ccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    |||||||||||| |||||| |||| | |||||| |||| ||| | |||||||||||| || |||||||||||    
T  4852660 ccccgcaagtggacggtggaattggtcccctcggattaatcgattcttggatcggatgccaagttttaaaaa 4852731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 96 - 171
Target Start/End: Original strand, 18708604 - 18708679
Alignment:
Q  96 ggacccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    |||||||||||| ||| ||||||||||||| |||||  |||||||||| ||| ||| | ||||| | |||||||||    
T  18708604 ggacccccgcaaatggacggtgggattgatcccctcagattagtcggtacttagattgaataccaaattttaaaaa 18708679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 99 - 166
Target Start/End: Original strand, 31778161 - 31778228
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagtttt 166  Q
    ||||||||||||| ||||| ||||| | | |||  ||||||| || ||||||||||||||||||||||    
T  31778161 cccccgcaagtggacggtgagattggtcctctcagattagtcagttcttggatcggataccgagtttt 31778228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 100 - 166
Target Start/End: Original strand, 13266620 - 13266686
Alignment:
Q  100 ccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagtttt 166  Q
    |||||||||||||   |||||||| | ||||| ||||||||| | ||||||||||||| ||||||||    
T  13266620 ccccgcaagtgggtaatgggattggtcccctcaaattagtcgattcttggatcggatatcgagtttt 13266686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 100 - 141
Target Start/End: Complemental strand, 44976219 - 44976178
Alignment:
Q  100 ccccgcaagtgggcggtgggattgattccctcgaattagtcg 141  Q
    |||||||||||||||||||||||||| || ||| ||||||||    
T  44976219 ccccgcaagtgggcggtgggattgatcccttcggattagtcg 44976178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 99 - 171
Target Start/End: Complemental strand, 714192 - 714120
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||||||| ||||||||||| ||  | |||||  |||||||| | ||| ||| |||||||||||||||||||    
T  714192 cccccgcaaatgggcggtgggtttcgtcccctcagattagtcgattcttagattggataccgagttttaaaaa 714120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 99 - 171
Target Start/End: Original strand, 19849963 - 19850034
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||||||||||||||||| ||||| | | ||| ||||| ||| | |||||||| ||||| ||||||||||||    
T  19849963 cccccgcaagtgggcggtgagattggtcctctcaaattaatcgattcttggatc-gatactgagttttaaaaa 19850034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 127 - 171
Target Start/End: Original strand, 27290732 - 27290776
Alignment:
Q  127 ccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    |||||| |||||||| | |||||||||||||||||||||| ||||    
T  27290732 ccctcggattagtcgattcttggatcggataccgagttttcaaaa 27290776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 56; Significance: 4e-23; HSPs: 59)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 76 - 171
Target Start/End: Original strand, 7093475 - 7093573
Alignment:
Q  76 atacagagc-tagcttagaacggacccc--cgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||||||| ||||||||||||| ||||  || |||||||||||||||||| | || |||||||||||||||||||||||||||| |||||||||||||    
T  7093475 atacagagcatagcttagaacggccccctccgtaagtgggcggtgggattggtcccttcgaattagtcggtccttggatcggatatcgagttttaaaaa 7093573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 99 - 171
Target Start/End: Complemental strand, 19660599 - 19660527
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||||||||||||||||||||||||| |||||| |||||||| | |||||||||||||||||||||| ||||    
T  19660599 cccccgcaagtgggcggtgggattgatcccctcggattagtcgattcttggatcggataccgagttttcaaaa 19660527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 99 - 171
Target Start/End: Complemental strand, 22488095 - 22488023
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||||||| ||||||||||||||||| ||||| ||||||||||||||||||||||||||| |||||| ||||    
T  22488095 cccccgcaaatgggcggtgggattgatcccctcaaattagtcggtccttggatcggataccaagttttcaaaa 22488023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 99 - 171
Target Start/End: Complemental strand, 5609269 - 5609197
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||||||||||| ||||||||||||| |||||| |||||||| | |||||||||||||||||||||| ||||    
T  5609269 cccccgcaagtggacggtgggattgatcccctcggattagtcgattcttggatcggataccgagttttcaaaa 5609197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 99 - 171
Target Start/End: Complemental strand, 34844825 - 34844753
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||||||||||||||||||||||| | |||||| |||||||| | |||||||||||||||||||||| ||||    
T  34844825 cccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttcaaaa 34844753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 99 - 171
Target Start/End: Complemental strand, 45787771 - 45787699
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||||||||||| ||||||||||| | ||||||||||||||| | |||||||||||||||||||||| ||||    
T  45787771 cccccgcaagtggacggtgggattggtcccctcgaattagtcgattcttggatcggataccgagttttcaaaa 45787699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 104 - 168
Target Start/End: Original strand, 52494623 - 52494687
Alignment:
Q  104 gcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaa 168  Q
    |||||||||||||||||||| | ||||||||||||||| | ||||||||||||||||||||||||    
T  52494623 gcaagtgggcggtgggattggtcccctcgaattagtcgattcttggatcggataccgagttttaa 52494687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 99 - 166
Target Start/End: Complemental strand, 40058919 - 40058852
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagtttt 166  Q
    ||||||||||||||||||||||||| | |||||| |||||||| | ||||||||||||||||||||||    
T  40058919 cccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 40058852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 101 - 171
Target Start/End: Original strand, 44343646 - 44343716
Alignment:
Q  101 cccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||||||||||||||||||||| | ||||||||||||||| | |||| ||||||||||||||||| ||||    
T  44343646 cccgcaagtgggcggtgggattggtcccctcgaattagtcgattcttgaatcggataccgagttttcaaaa 44343716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 99 - 165
Target Start/End: Original strand, 52983749 - 52983815
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttt 165  Q
    ||||||||||||||||||||||||| | |||||| |||||||| | |||||||||||||||||||||    
T  52983749 cccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttt 52983815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 88 - 171
Target Start/End: Original strand, 13017831 - 13017914
Alignment:
Q  88 cttagaacgg-acccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    |||||||||| |||||||||||||||| ||||||||| | | |||| ||||||||||||||||||| ||||||||||||| ||||    
T  13017831 cttagaacgggacccccgcaagtgggcagtgggattggtccactcggattagtcggtccttggatc-gataccgagttttcaaaa 13017914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 99 - 171
Target Start/End: Complemental strand, 27528862 - 27528790
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||||||||||||||||| ||||| | |||||| |||||||| | |||||||||||||||||||||| ||||    
T  27528862 cccccgcaagtgggcggtgagattggtcccctcggattagtcgattcttggatcggataccgagttttcaaaa 27528790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 99 - 171
Target Start/End: Original strand, 32986327 - 32986399
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||||||||||||||||||||||| | |||||| | |||||| | |||||||||||||||||||||| ||||    
T  32986327 cccccgcaagtgggcggtgggattggtcccctcggaatagtcgattcttggatcggataccgagttttcaaaa 32986399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 99 - 171
Target Start/End: Original strand, 35229298 - 35229370
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||| |||||| |||||||||||| | ||||||||||||||| | ||||||||||||||||| |||||||||    
T  35229298 cccccacaagtgagcggtgggattggtcccctcgaattagtcgattcttggatcggataccgaattttaaaaa 35229370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 99 - 171
Target Start/End: Complemental strand, 54127409 - 54127337
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||||||||||||||||||||||| | |||||| |||||||||| |||||| ||||||| ||||||| ||||    
T  54127409 cccccgcaagtgggcggtgggattggtcccctcggattagtcggttcttggaccggatactgagttttcaaaa 54127337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 102 - 165
Target Start/End: Complemental strand, 9646280 - 9646217
Alignment:
Q  102 ccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttt 165  Q
    |||||||||||| ||||||||||| |||||| ||||||||||| ||||||||| ||||||||||    
T  9646280 ccgcaagtgggcagtgggattgatcccctcggattagtcggtcattggatcgggtaccgagttt 9646217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 96 - 171
Target Start/End: Original strand, 25852342 - 25852417
Alignment:
Q  96 ggacccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    |||||| |||||||||||  |||||||| | |||||| |||||||||| |||||| ||||||||||||||||||||    
T  25852342 ggaccctcgcaagtgggcaatgggattggtcccctcggattagtcggttcttggaccggataccgagttttaaaaa 25852417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 99 - 164
Target Start/End: Complemental strand, 20078051 - 20077986
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagtt 164  Q
    |||||| |||||||||||||||||  |||||||| |||||||| | ||||||||||||||||||||    
T  20078051 cccccgtaagtgggcggtgggattagttccctcggattagtcgattcttggatcggataccgagtt 20077986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 99 - 171
Target Start/End: Original strand, 4912056 - 4912128
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    |||||||||||||| |||| ||||||| ||| ||||||||||| | |||||||| ||||||||||||| ||||    
T  4912056 cccccgcaagtgggtggtgtgattgatccccccgaattagtcgattcttggatcagataccgagttttcaaaa 4912128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 99 - 171
Target Start/End: Original strand, 20566480 - 20566552
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    |||||||||||||||| |||||||| | |||||  |||||||| | ||||||||||||| |||||||||||||    
T  20566480 cccccgcaagtgggcgctgggattggtcccctcagattagtcgattcttggatcggatatcgagttttaaaaa 20566552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 99 - 171
Target Start/End: Original strand, 34723929 - 34724001
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    |||||||||||||| |||||||||| | | |||| |||||||| | |||||||||||||||||||||| ||||    
T  34723929 cccccgcaagtgggtggtgggattggtcctctcggattagtcgattcttggatcggataccgagtttttaaaa 34724001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 99 - 171
Target Start/End: Original strand, 51535751 - 51535823
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    |||| |||||||||||||||||||| | ||||||||||||||| | ||| ||||||||||||| |||| ||||    
T  51535751 ccccagcaagtgggcggtgggattggtcccctcgaattagtcgattcttagatcggataccgaatttttaaaa 51535823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 103 - 166
Target Start/End: Original strand, 23639758 - 23639821
Alignment:
Q  103 cgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagtttt 166  Q
    ||||||||| ||||||||||| | |||||| |||||||| | ||||||||||||||||||||||    
T  23639758 cgcaagtggacggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 23639821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 103 - 166
Target Start/End: Original strand, 23645416 - 23645479
Alignment:
Q  103 cgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagtttt 166  Q
    ||||||||| ||||||||||| | |||||| |||||||| | ||||||||||||||||||||||    
T  23645416 cgcaagtggacggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 23645479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 99 - 166
Target Start/End: Original strand, 46714523 - 46714590
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagtttt 166  Q
    ||||||||||||||||||||||||| | |||||| |||||||  | |||| |||||||||||||||||    
T  46714523 cccccgcaagtgggcggtgggattggtcccctcggattagtcaattcttgaatcggataccgagtttt 46714590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 105 - 171
Target Start/End: Complemental strand, 23131497 - 23131431
Alignment:
Q  105 caagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    |||||||||||| |||||| | ||||||||||||||| | ||| |||||||||||||||||| ||||    
T  23131497 caagtgggcggtaggattggtcccctcgaattagtcgattcttcgatcggataccgagttttcaaaa 23131431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 105 - 171
Target Start/End: Original strand, 28791250 - 28791316
Alignment:
Q  105 caagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||||||||||| ||||| |||  ||||||||||||||||||| |||||||| |||||||| ||||    
T  28791250 caagtgggcggtgagattggttctttcgaattagtcggtccttgaatcggatatcgagttttcaaaa 28791316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 99 - 171
Target Start/End: Original strand, 4064990 - 4065062
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||| ||||||||||||||||||| | |||||| |||||||| |  |||||||||||| ||| |||||||||    
T  4064990 cccccacaagtgggcggtgggattggtcccctcggattagtcgatttttggatcggatatcgaattttaaaaa 4065062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 107 - 171
Target Start/End: Complemental strand, 7392024 - 7391960
Alignment:
Q  107 agtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||||||||||||||| | |||||| |||||||||| ||| ||| |||||||||||||| ||||    
T  7392024 agtgggcggtgggattgttcccctcggattagtcggttcttcgattggataccgagttttcaaaa 7391960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 99 - 171
Target Start/End: Complemental strand, 9978576 - 9978504
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||||||||||||||||||||||| | || ||| |||||| | | ||| |||||||||||||||||| ||||    
T  9978576 cccccgcaagtgggcggtgggattggtcccatcggattagttgattcttagatcggataccgagtttttaaaa 9978504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 103 - 171
Target Start/End: Original strand, 24273356 - 24273424
Alignment:
Q  103 cgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    |||||||||| ||| |||||||| || ||  ||||||||||||||||||| |||||||||||| |||||    
T  24273356 cgcaagtgggtggtaggattgatcccatcagattagtcggtccttggatcagataccgagtttaaaaaa 24273424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 99 - 171
Target Start/End: Original strand, 32990565 - 32990637
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||||||||||||||||||||||| | |||||| | |||||| | ||||||||| |||| ||||||| ||||    
T  32990565 cccccgcaagtgggcggtgggattggtcccctcggactagtcgattcttggatcgaatactgagttttcaaaa 32990637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 99 - 171
Target Start/End: Complemental strand, 33696346 - 33696274
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||||||||||||||||| ||||| | | |||| |||||||  | ||||||||||||| |||||||||||||    
T  33696346 cccccgcaagtgggcggtgagattggtcctctcggattagtcaattcttggatcggatatcgagttttaaaaa 33696274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 100 - 171
Target Start/End: Original strand, 6427119 - 6427189
Alignment:
Q  100 ccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    |||| ||||||| | |||||||||| ||||||| ||||||||||||||||  ||||||||||||||| ||||    
T  6427119 ccccacaagtggacagtgggattgaatccctcggattagtcggtccttgg-ccggataccgagttttcaaaa 6427189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 104 - 171
Target Start/End: Original strand, 12824535 - 12824602
Alignment:
Q  104 gcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    |||||||| ||||||||||| |  | |||||||||||| | |||||||||||||| ||||||||||||    
T  12824535 gcaagtggacggtgggattggtctcatcgaattagtcgattcttggatcggatacggagttttaaaaa 12824602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 96 - 171
Target Start/End: Complemental strand, 36131580 - 36131505
Alignment:
Q  96 ggacccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||||||| |||||||||||||||||| | |||||| |||||||| |  || |||| ||||||||||||| ||||    
T  36131580 ggacccccgtaagtgggcggtgggattggtcccctcggattagtcgattattagatcagataccgagttttcaaaa 36131505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 100 - 171
Target Start/End: Original strand, 51595153 - 51595224
Alignment:
Q  100 ccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    |||||||||||| |||||| ||||||  | ||| |||| ||| | |||||||||||||||||||||||||||    
T  51595153 ccccgcaagtggacggtggaattgatctcttcggattaatcgattcttggatcggataccgagttttaaaaa 51595224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 93 - 171
Target Start/End: Complemental strand, 25969575 - 25969498
Alignment:
Q  93 aacggacccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||| |||||| ||||| |||||||||||| | ||||||||||||||| | |||| ||||||||| |||||| |||||    
T  25969575 aacgggcccccgtaagtgagcggtgggattggt-ccctcgaattagtcgattcttgaatcggatactgagtttaaaaaa 25969498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 93 - 171
Target Start/End: Original strand, 39343584 - 39343662
Alignment:
Q  93 aacggacccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||| ||| ||||| | ||||||| ||||| | ||||| |||||||| ||||||||||||||||| ||||||| ||||    
T  39343584 aacggcccctcgcaaataggcggtgtgattggtcccctcaaattagtctgtccttggatcggatactgagtttttaaaa 39343662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 105 - 171
Target Start/End: Complemental strand, 41621643 - 41621577
Alignment:
Q  105 caagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    |||||||| ||||||| | || |||||  |||||||||||||||||||||||| ||||||| |||||    
T  41621643 caagtgggtggtgggactaatcccctcagattagtcggtccttggatcggataacgagtttcaaaaa 41621577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 113 - 169
Target Start/End: Complemental strand, 3391499 - 3391443
Alignment:
Q  113 cggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaa 169  Q
    ||||| ||||| | |||||||||||||||||| ||| ||| ||||||||||||||||    
T  3391499 cggtgagattggtcccctcgaattagtcggtcattgaatcagataccgagttttaaa 3391443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 99 - 171
Target Start/End: Complemental strand, 43719154 - 43719082
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    |||||| |||||||||||||||||| |   |||| |||||||| | ||||||||||||||||| |||| ||||    
T  43719154 cccccgaaagtgggcggtgggattggtcatctcggattagtcgattcttggatcggataccgaattttcaaaa 43719082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 91 - 171
Target Start/End: Complemental strand, 46759178 - 46759098
Alignment:
Q  91 agaacggacccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    |||| |||||||||||| | | ||||| ||||| |||||||| |||| ||| || || |||||||||||||| ||||||||    
T  46759178 agaatggacccccgcaaatagacggtgagattggttccctcggattaatcgatctttagatcggataccgaggtttaaaaa 46759098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 104 - 171
Target Start/End: Original strand, 12710312 - 12710379
Alignment:
Q  104 gcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||||| |||| ||||||| |  ||||  |||| ||||||||||||||||||||||||||| |||||    
T  12710312 gcaagtgagcggagggattggtcacctcagattaatcggtccttggatcggataccgagtttaaaaaa 12710379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 107 - 166
Target Start/End: Original strand, 40307677 - 40307736
Alignment:
Q  107 agtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagtttt 166  Q
    ||||| |||||| |||||| ||||||||||||| ||||||| |||| |||||| ||||||    
T  40307677 agtggacggtggaattgatcccctcgaattagttggtccttagatcagataccaagtttt 40307736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 105 - 171
Target Start/End: Complemental strand, 17637912 - 17637847
Alignment:
Q  105 caagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    |||||||||||||  |||| | |||||| |||||||| | |||| ||||||||||||||||||||||    
T  17637912 caagtgggcggtgatattggtcccctcggattagtcgattcttg-atcggataccgagttttaaaaa 17637847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 113 - 171
Target Start/End: Original strand, 21621680 - 21621738
Alignment:
Q  113 cggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    |||||| |||| |||||||| ||||| ||||||||||||| |||| ||||||| |||||    
T  21621680 cggtggaattggttccctcggattagccggtccttggatcagatatcgagtttaaaaaa 21621738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 133 - 171
Target Start/End: Complemental strand, 24672338 - 24672300
Alignment:
Q  133 aattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||||||| | |||||||||||||||||||||||||||    
T  24672338 aattagtcgattcttggatcggataccgagttttaaaaa 24672300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 105 - 171
Target Start/End: Original strand, 33289190 - 33289256
Alignment:
Q  105 caagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||||| ||||| ||||  | |||||| |||||||| | |||||||||||||||| ||||||||||    
T  33289190 caagtggacggtgagattagtcccctcggattagtcgattcttggatcggataccgggttttaaaaa 33289256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 105 - 171
Target Start/End: Original strand, 37172901 - 37172967
Alignment:
Q  105 caagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    |||||| |||||| ||||||| |  ||| |||||||| ||||||||||||||||||| ||| |||||    
T  37172901 caagtgagcggtgagattgatcctttcggattagtcgatccttggatcggataccgaatttaaaaaa 37172967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 93 - 166
Target Start/End: Complemental strand, 18875590 - 18875517
Alignment:
Q  93 aacggacccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagtttt 166  Q
    ||||| ||||| ||||||||  ||||||||||| |||||| |||||||  |  ||||||| |||||||||||||    
T  18875590 aacgggcccccacaagtgggtagtgggattgatcccctcggattagtcaatttttggatcagataccgagtttt 18875517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 151
Target Start/End: Complemental strand, 22630253 - 22630204
Alignment:
Q  102 ccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggat 151  Q
    |||||| ||||||||| ||||| | ||||||||| |||||||||||||||    
T  22630253 ccgcaaatgggcggtgagattggtcccctcgaatcagtcggtccttggat 22630204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 171
Target Start/End: Complemental strand, 31140134 - 31140097
Alignment:
Q  134 attagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||||||||||||||| | ||||||||||||||||||    
T  31140134 attagtcggtccttggaccagataccgagttttaaaaa 31140097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 168
Target Start/End: Complemental strand, 47464187 - 47464106
Alignment:
Q  87 gcttagaacggacccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaa 168  Q
    ||||||| |||  |||||||||||| |||||| |||| |  |||  |||||||||||||||| ||| |||||||| ||||||    
T  47464187 gcttagagcggggccccgcaagtggacggtggaattggtctccttaaattagtcggtccttgaatcagataccgaattttaa 47464106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 101 - 166
Target Start/End: Original strand, 49287989 - 49288054
Alignment:
Q  101 cccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagtttt 166  Q
    |||||||||||||| || ||||| | |||||| |||||||| | |||||||| ||||| |||||||    
T  49287989 cccgcaagtgggcgctgagattggtcccctcggattagtcgattcttggatcagatactgagtttt 49288054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 99 - 171
Target Start/End: Original strand, 27574448 - 27574520
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||||||||||||||||| | ||| | |||||| |||| ||  | |||||||||||||| ||||||| ||||    
T  27574448 cccccgcaagtgggcggtgagtttggtcccctcggattaatcaattcttggatcggatactgagttttcaaaa 27574520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 99 - 171
Target Start/End: Original strand, 34835660 - 34835731
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    |||||||||||||||| || ||||| | |||||| |||||||| | ||| ||||| |||| ||||||||||||    
T  34835660 cccccgcaagtgggcg-tgagattggtcccctcggattagtcgattcttagatcgaatactgagttttaaaaa 34835731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 99 - 171
Target Start/End: Complemental strand, 42508448 - 42508376
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||| |||||||||||| | |||| | |||||||||||||||||  || |||  |||||||||||| |||||    
T  42508448 cccccacaagtgggcggttgaattggtcccctcgaattagtcggttattagattagataccgagtttaaaaaa 42508376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 99 - 171
Target Start/End: Complemental strand, 53787124 - 53787052
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||||||| ||||||||||||||  | |||||  ||||||||||  |||||||| |||||| ||||| ||||    
T  53787124 cccccgcaaatgggcggtgggattagtcccctcagattagtcggtttttggatcgaataccgggttttcaaaa 53787052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1175 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold1175
Description:

Target: scaffold1175; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 99 - 171
Target Start/End: Complemental strand, 2493 - 2421
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||||||||||||||||||||||| | |||||| ||||||| ||||||| ||||||||||||||||||||||    
T  2493 cccccgcaagtgggcggtgggattggtcccctcggattagtccgtccttgaatcggataccgagttttaaaaa 2421  T

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Target: chr6 (Bit Score: 52; Significance: 9e-21; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 100 - 171
Target Start/End: Complemental strand, 14504148 - 14504077
Alignment:
Q  100 ccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    |||||||||||||||||||||||||| | ||||||||||||| |||||| ||||||||||||||||| ||||    
T  14504148 ccccgcaagtgggcggtgggattgatcctctcgaattagtcgatccttgtatcggataccgagtttttaaaa 14504077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 99 - 171
Target Start/End: Original strand, 9239105 - 9239177
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||||||||||||||||||||||| | |||||| |||||||| | ||||||||||||||||||||| |||||    
T  9239105 cccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttaaaaaa 9239177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 99 - 171
Target Start/End: Original strand, 34147476 - 34147548
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||||||||||||||||||||||| | |||||| |||||||| | |||||||||||||||||||||| ||||    
T  34147476 cccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttcaaaa 34147548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 99 - 171
Target Start/End: Original strand, 34160092 - 34160164
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||||||||||||||||||||||| | |||||| |||||||| | |||||||||||||||||||||| ||||    
T  34160092 cccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttcaaaa 34160164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 100 - 171
Target Start/End: Complemental strand, 3222702 - 3222631
Alignment:
Q  100 ccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    |||||||||||||||||||||||| | |||||| |||||||| | |||||||||||||||||||||| ||||    
T  3222702 ccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttcaaaa 3222631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 98 - 171
Target Start/End: Complemental strand, 5360139 - 5360066
Alignment:
Q  98 acccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    |||||| ||||||||||||||||||| | ||||||||||||||| | ||| |||||||||||||||||| ||||    
T  5360139 acccccacaagtgggcggtgggattggtcccctcgaattagtcgattcttagatcggataccgagttttgaaaa 5360066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 99 - 171
Target Start/End: Complemental strand, 15360165 - 15360093
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||||||| ||||||||||||||| | |||||| |||||||| | |||||||||||||||||||||| ||||    
T  15360165 cccccgcaaatgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttcaaaa 15360093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 99 - 171
Target Start/End: Complemental strand, 21982387 - 21982316
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||||||||||||||||||||||| | |||||| |||||||| | |||||||||||||||||||||| ||||    
T  21982387 cccccgcaagtgggcggtgggattggt-ccctcggattagtcgattcttggatcggataccgagttttcaaaa 21982316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 100 - 171
Target Start/End: Complemental strand, 21148577 - 21148506
Alignment:
Q  100 ccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    |||||||||||||||||||||||| | |||||| |||||||| | |||| ||||||||||||||||| ||||    
T  21148577 ccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttgaatcggataccgagttttcaaaa 21148506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 101 - 171
Target Start/End: Complemental strand, 654211 - 654141
Alignment:
Q  101 cccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||||||||||||||||||||| | |||||| |||||||| |  ||||||||||||||||||||| ||||    
T  654211 cccgcaagtgggcggtgggattggtcccctcggattagtcgattattggatcggataccgagtttttaaaa 654141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 99 - 164
Target Start/End: Complemental strand, 17149523 - 17149458
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagtt 164  Q
    ||||||||||||  ||||||||||| | |||||||||||||||||||||| ||| |||||||||||    
T  17149523 cccccgcaagtgaacggtgggattggtcccctcgaattagtcggtccttgaatcagataccgagtt 17149458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 89 - 166
Target Start/End: Original strand, 17225786 - 17225863
Alignment:
Q  89 ttagaacggacccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagtttt 166  Q
    |||||||||  |||||||| |||||||||||||||||  ||||  |||||||||||||| ||||||||| ||||||||    
T  17225786 ttagaacggggccccgcaaatgggcggtgggattgatctcctcagattagtcggtccttagatcggatatcgagtttt 17225863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 99 - 171
Target Start/End: Original strand, 1345065 - 1345137
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||||||||||| ||||||||||| | |||| | |||||||| | |||||||||||||||||||||| ||||    
T  1345065 cccccgcaagtggacggtgggattggtccccttggattagtcgattcttggatcggataccgagttttcaaaa 1345137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 99 - 171
Target Start/End: Complemental strand, 17081121 - 17081049
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||||||||||||||||||||||| | ||||||||| ||| | | ||||||||| |||||||||||| ||||    
T  17081121 cccccgcaagtgggcggtgggattggtcccctcgaataagttgtttcttggatcgaataccgagttttcaaaa 17081049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 103 - 171
Target Start/End: Original strand, 28672201 - 28672269
Alignment:
Q  103 cgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||||||||||||||||||| | |||||| |||||||| | |||||||| ||||||||||||| ||||    
T  28672201 cgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcagataccgagtttttaaaa 28672269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 99 - 166
Target Start/End: Original strand, 11449001 - 11449068
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagtttt 166  Q
    ||||||||||||||||||||||||| | |||||| |||||||| | |||| |||||||| ||||||||    
T  11449001 cccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttgaatcggatatcgagtttt 11449068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 100 - 171
Target Start/End: Original strand, 14213013 - 14213084
Alignment:
Q  100 ccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||||||||||| |||||||||| | | |||| |||||||| | |||||||||||||||||||||| ||||    
T  14213013 ccccgcaagtgggtggtgggattggtccactcggattagtcgattcttggatcggataccgagttttcaaaa 14213084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 105 - 171
Target Start/End: Complemental strand, 9690699 - 9690633
Alignment:
Q  105 caagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||||| ||||||||||| | | |||| |||||||| | |||||||||||||||||||||||||||    
T  9690699 caagtggacggtgggattggtcctctcggattagtcgattcttggatcggataccgagttttaaaaa 9690633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 99 - 164
Target Start/End: Original strand, 10377846 - 10377911
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagtt 164  Q
    ||||| |||||||||||||| |||| | |||||| | |||||||||||||||| ||||||||||||    
T  10377846 cccccacaagtgggcggtggcattggtcccctcggagtagtcggtccttggattggataccgagtt 10377911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 87 - 171
Target Start/End: Complemental strand, 3418990 - 3418906
Alignment:
Q  87 gcttagaacggacccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    |||||||| ||| |||||||||| | |||||| |||||| ||||||||||| |||||  ||||||||||||  |||||| |||||    
T  3418990 gcttagaatggagccccgcaagtagacggtggaattgatcccctcgaattaatcggtttttggatcggatattgagtttaaaaaa 3418906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 99 - 171
Target Start/End: Original strand, 11007295 - 11007367
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    |||||||||||||||||||||||||   |||||| |||||||| | ||| ||||||||||| |||||| ||||    
T  11007295 cccccgcaagtgggcggtgggattggccccctcggattagtcgattctttgatcggatacctagttttcaaaa 11007367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 105 - 171
Target Start/End: Original strand, 33499611 - 33499677
Alignment:
Q  105 caagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||||||||||||||||| | |||||| ||||||| ||   |||| ||||||||||||||||||||    
T  33499611 caagtgggcggtgggattggtcccctcggattagtcagttgatggaccggataccgagttttaaaaa 33499677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 106 - 171
Target Start/End: Original strand, 11841037 - 11841102
Alignment:
Q  106 aagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    |||||| ||||||||||  | ||||||||||||||| |  ||||||||||||||||||||| ||||    
T  11841037 aagtggacggtgggattagtcccctcgaattagtcgattattggatcggataccgagtttttaaaa 11841102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 104 - 157
Target Start/End: Complemental strand, 33718531 - 33718478
Alignment:
Q  104 gcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggata 157  Q
    |||||||| ||||||||||||| |||||| |||||||| | |||||||||||||    
T  33718531 gcaagtggacggtgggattgatcccctcggattagtcgattcttggatcggata 33718478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 99 - 171
Target Start/End: Original strand, 9208382 - 9208454
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||||||||||||||||||||||| |  ||||  | |||||| | ||||||||  |||||||||||||||||    
T  9208382 cccccgcaagtgggcggtgggattggtctcctcagaatagtcgattcttggatcaaataccgagttttaaaaa 9208454  T

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Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 99 - 171
Target Start/End: Complemental strand, 15730562 - 15730490
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||| || |||||||||||||||| |  ||||| |||||||| | ||| ||||||||| |||||||||||||    
T  15730562 cccccacacgtgggcggtgggattggtcacctcggattagtcgattctttgatcggatatcgagttttaaaaa 15730490  T

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Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 99 - 166
Target Start/End: Original strand, 9844068 - 9844135
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagtttt 166  Q
    ||||| ||||||||||||| ||||| | || ||| |||||||| | ||||||||||||| ||||||||    
T  9844068 ccccctcaagtgggcggtgagattggtcccttcggattagtcgattcttggatcggatatcgagtttt 9844135  T

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Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 99 - 141
Target Start/End: Original strand, 12390555 - 12390597
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcg 141  Q
    ||||||||||||||||||||||||| | |||||| ||||||||    
T  12390555 cccccgcaagtgggcggtgggattggtcccctcggattagtcg 12390597  T

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Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 171
Target Start/End: Original strand, 27904565 - 27904602
Alignment:
Q  134 attagtcggtccttggatcggataccgagttttaaaaa 171  Q
    |||||||||||||||| | |||||||||||||||||||    
T  27904565 attagtcggtccttgggttggataccgagttttaaaaa 27904602  T

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Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 158
Target Start/End: Complemental strand, 28741878 - 28741849
Alignment:
Q  129 ctcgaattagtcggtccttggatcggatac 158  Q
    ||||||||||||||||||||||||||||||    
T  28741878 ctcgaattagtcggtccttggatcggatac 28741849  T

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Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 134 - 166
Target Start/End: Original strand, 14946673 - 14946705
Alignment:
Q  134 attagtcggtccttggatcggataccgagtttt 166  Q
    |||||||||| ||||||||||||||||||||||    
T  14946673 attagtcggtacttggatcggataccgagtttt 14946705  T

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Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 101 - 141
Target Start/End: Complemental strand, 27866268 - 27866228
Alignment:
Q  101 cccgcaagtgggcggtgggattgattccctcgaattagtcg 141  Q
    ||||||||||||||||||||||  | |||||||||||||||    
T  27866268 cccgcaagtgggcggtgggattagtcccctcgaattagtcg 27866228  T

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Target: scaffold0217 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 99 - 171
Target Start/End: Complemental strand, 7376 - 7304
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||||||||||||||||||||||| | |||||| |||||||| | ||||||||||||||| |||||||||||    
T  7376 cccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccaagttttaaaaa 7304  T

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Target: scaffold0026 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 96 - 171
Target Start/End: Complemental strand, 97436 - 97361
Alignment:
Q  96 ggacccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    |||||||||||||||||||||||||||| | | |||| ||||||||||  ||||| ||||||||||||||||||||    
T  97436 ggacccccgcaagtgggcggtgggattggtcctctcgtattagtcggtttttggaccggataccgagttttaaaaa 97361  T

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Target: scaffold0026; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 89 - 171
Target Start/End: Original strand, 5950 - 6033
Alignment:
Q  89 ttagaacggaccc-ccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    |||||||||| || |||||||||| ||||||||||| |  ||||  ||||||||||||||||||  |||| ||| |||||||||    
T  5950 ttagaacggagcctccgcaagtggacggtgggattggtcacctcagattagtcggtccttggattagatatcgaattttaaaaa 6033  T

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Target: scaffold0576 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 99 - 171
Target Start/End: Complemental strand, 5149 - 5077
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||||||| ||||||||||||||| | |||||| |||||||| | |||||||||||||||||||||| ||||    
T  5149 cccccgcaaatgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttcaaaa 5077  T

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Target: scaffold0328 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 99 - 171
Target Start/End: Complemental strand, 13114 - 13042
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||||||||||| ||||||||||||| |||||  |||||| | | |||||||||||||||||||||||||||    
T  13114 cccccgcaagtggacggtgggattgatcccctcagattagttgattcttggatcggataccgagttttaaaaa 13042  T

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Target: scaffold0160 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 87 - 171
Target Start/End: Complemental strand, 29222 - 29138
Alignment:
Q  87 gcttagaacggacccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||| || |||||||||||| ||| | ||||||||| | |||||  ||||||| ||||||||||||||||||||||||||||||    
T  29222 gcttaaaatggacccccgcaaatggacagtgggattggtcccctcagattagtcagtccttggatcggataccgagttttaaaaa 29138  T

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Target: scaffold0102 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 99 - 171
Target Start/End: Original strand, 39222 - 39294
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||||||||||||||||||||||| | |||||| |||||||| | |||||||| ||||||||||||| ||||    
T  39222 cccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcagataccgagttttcaaaa 39294  T

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Target: scaffold0070 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 99 - 171
Target Start/End: Original strand, 40455 - 40526
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||||||||||||||||||||||| | |||||| |||||||| | |||||||||||||||||||||| ||||    
T  40455 cccccgcaagtgggcggtgggattggt-ccctcggattagtcgattcttggatcggataccgagttttcaaaa 40526  T

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Target: scaffold0019 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 99 - 171
Target Start/End: Original strand, 161939 - 162011
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||||||||||||||||||||||| | |||||| |||||||| | |||||||| ||||||||||||| ||||    
T  161939 cccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcagataccgagttttcaaaa 162011  T

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Target: scaffold1712 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold1712
Description:

Target: scaffold1712; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 96 - 171
Target Start/End: Complemental strand, 677 - 602
Alignment:
Q  96 ggacccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    |||||||||||||||||||| ||||||| |||| || ||||||||||||| | |||| ||||| ||||||||||||    
T  677 ggacccccgcaagtgggcggagggattggttccatcaaattagtcggtccgtcgatcagatactgagttttaaaaa 602  T

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Target: scaffold0623 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0623
Description:

Target: scaffold0623; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 99 - 171
Target Start/End: Complemental strand, 1123 - 1052
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||||||||||| ||||||||||| | ||||||||||||||| | ||| |||||||||||||||||| ||||    
T  1123 cccccgcaagtggacggtgggattggtcccctcgaattagtcgattctt-gatcggataccgagtttttaaaa 1052  T

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Target: scaffold0366 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0366
Description:

Target: scaffold0366; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 99 - 171
Target Start/End: Complemental strand, 9366 - 9295
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||||||||||| ||||||||||| | ||||||||||||||| | ||| |||||||||||||||||| ||||    
T  9366 cccccgcaagtggacggtgggattggtcccctcgaattagtcgattctt-gatcggataccgagttttcaaaa 9295  T

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Target: scaffold0171 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 100 - 166
Target Start/End: Complemental strand, 11486 - 11420
Alignment:
Q  100 ccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagtttt 166  Q
    ||||||||||||  | |||||||||| ||||| ||||||| ||||||||||||||||||| ||||||    
T  11486 ccccgcaagtggaagatgggattgatcccctcaaattagttggtccttggatcggataccaagtttt 11420  T

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Target: scaffold0016 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 99 - 171
Target Start/End: Original strand, 32418 - 32489
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    |||||||||||||| |||||||||| | |||||| |||||||| | ||| |||||||||||||||||| ||||    
T  32418 cccccgcaagtgggtggtgggattggtcccctcggattagtcgattctt-gatcggataccgagttttcaaaa 32489  T

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Target: scaffold0199 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 104 - 171
Target Start/End: Complemental strand, 8513 - 8446
Alignment:
Q  104 gcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    |||||||||||||||||||| | | |||| |||||||| | ||| |||||||||||||||||| ||||    
T  8513 gcaagtgggcggtgggattggtccgctcggattagtcgattcttagatcggataccgagtttttaaaa 8446  T

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Target: scaffold0028 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 102 - 171
Target Start/End: Original strand, 27903 - 27972
Alignment:
Q  102 ccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||||||||| |||| ||||  | |||||| |||||||||| |||||||| |||||||||||| |||||    
T  27903 ccgcaagtgggtggtgagatttgtcccctcggattagtcggttcttggatcagataccgagtttaaaaaa 27972  T

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Target: scaffold0051 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 99 - 171
Target Start/End: Complemental strand, 52938 - 52866
Alignment:
Q  99 cccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    |||||||| ||||||||| |||||| | | |||| |||||||| | |||| ||||||||||||||||| ||||    
T  52938 cccccgcaggtgggcggtaggattggtcctctcggattagtcgattcttgaatcggataccgagttttcaaaa 52866  T

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Target: scaffold0459 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0459
Description:

Target: scaffold0459; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 100 - 171
Target Start/End: Complemental strand, 10760 - 10690
Alignment:
Q  100 ccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    |||| ||||||| ||||||||||| | ||||||||||||||  | ||| |||||||||||||||||| ||||    
T  10760 ccccacaagtggacggtgggattggtcccctcgaattagtcaattctt-gatcggataccgagttttcaaaa 10690  T

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Target: scaffold0020 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 87 - 171
Target Start/End: Complemental strand, 123144 - 123061
Alignment:
Q  87 gcttagaacggacccccgcaagtgggcggtgggattgattccctcgaattagtcggtccttggatcggataccgagttttaaaaa 171  Q
    ||||||||| |  |||| |||||| | |||||||||| | |||||| |||| ||| || |||||||||||||| |||||||||||    
T  123144 gcttagaacagggccccacaagtgtgtggtgggattggtcccctcggattaatcgatc-ttggatcggataccaagttttaaaaa 123061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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