View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12637_low_31 (Length: 250)

Name: NF12637_low_31
Description: NF12637
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12637_low_31
NF12637_low_31
[»] chr3 (55 HSPs)
chr3 (1-167)||(35963093-35963260)
chr3 (53-167)||(6438077-6438191)
chr3 (52-167)||(579154-579269)
chr3 (4-167)||(28875353-28875514)
chr3 (54-167)||(50651053-50651166)
chr3 (7-140)||(2927238-2927370)
chr3 (52-141)||(6075074-6075163)
chr3 (52-141)||(14752250-14752339)
chr3 (53-167)||(36546536-36546650)
chr3 (53-167)||(36561665-36561779)
chr3 (59-167)||(37042433-37042541)
chr3 (7-140)||(46557244-46557376)
chr3 (53-167)||(47864185-47864299)
chr3 (52-141)||(54464937-54465026)
chr3 (7-122)||(9263956-9264071)
chr3 (59-167)||(23311609-23311717)
chr3 (53-128)||(33974614-33974689)
chr3 (52-167)||(7866499-7866614)
chr3 (53-167)||(37074952-37075068)
chr3 (53-140)||(32619873-32619960)
chr3 (55-133)||(8703105-8703182)
chr3 (55-133)||(9054992-9055069)
chr3 (59-167)||(11054328-11054432)
chr3 (52-167)||(46711674-46711788)
chr3 (53-140)||(53270227-53270316)
chr3 (52-141)||(6752663-6752752)
chr3 (53-113)||(48802550-48802610)
chr3 (7-167)||(19464024-19464183)
chr3 (60-141)||(20847310-20847391)
chr3 (54-139)||(47866957-47867041)
chr3 (59-167)||(30189570-30189679)
chr3 (53-133)||(50730103-50730183)
chr3 (53-133)||(50782671-50782751)
chr3 (64-141)||(34722647-34722724)
chr3 (59-141)||(3972275-3972357)
chr3 (59-141)||(3997521-3997603)
chr3 (59-141)||(38674870-38674952)
chr3 (52-126)||(41476386-41476460)
chr3 (52-141)||(26208007-26208096)
chr3 (52-141)||(26725033-26725122)
chr3 (69-137)||(30454770-30454838)
chr3 (69-165)||(34194892-34194988)
chr3 (53-140)||(29235187-29235268)
chr3 (69-121)||(38401384-38401436)
chr3 (59-126)||(41936248-41936313)
chr3 (69-140)||(8097061-8097132)
chr3 (75-141)||(7886659-7886725)
chr3 (53-98)||(23910580-23910625)
chr3 (100-165)||(46918231-46918296)
chr3 (53-141)||(47115843-47115931)
chr3 (52-115)||(31181020-31181083)
chr3 (74-132)||(12128721-12128779)
chr3 (58-115)||(36509527-36509583)
chr3 (68-121)||(52252038-52252091)
chr3 (76-165)||(16033005-16033094)
[»] chr8 (37 HSPs)
chr8 (7-167)||(43216405-43216565)
chr8 (7-167)||(36190715-36190874)
chr8 (52-167)||(34890232-34890347)
chr8 (52-167)||(31734102-31734217)
chr8 (52-141)||(24892825-24892914)
chr8 (52-167)||(8711863-8711979)
chr8 (59-167)||(7022461-7022569)
chr8 (7-140)||(4046979-4047110)
chr8 (52-167)||(28348598-28348712)
chr8 (53-141)||(7499714-7499803)
chr8 (53-167)||(7858516-7858630)
chr8 (53-141)||(8107702-8107789)
chr8 (53-141)||(41086470-41086558)
chr8 (53-141)||(15957995-15958085)
chr8 (52-167)||(13143751-13143866)
chr8 (53-172)||(34158344-34158463)
chr8 (64-137)||(3642057-3642130)
chr8 (74-141)||(30575919-30575986)
chr8 (52-167)||(35456082-35456197)
chr8 (52-141)||(16879476-16879565)
chr8 (53-133)||(15824723-15824803)
chr8 (59-167)||(26483526-26483634)
chr8 (52-105)||(13144081-13144134)
chr8 (52-141)||(29920352-29920441)
chr8 (81-167)||(35525603-35525689)
chr8 (59-167)||(2052830-2052936)
chr8 (52-127)||(41755913-41755987)
chr8 (73-138)||(7670748-7670813)
chr8 (69-138)||(27819663-27819732)
chr8 (59-103)||(8709906-8709950)
chr8 (69-126)||(14576244-14576301)
chr8 (69-165)||(17713227-17713323)
chr8 (69-165)||(26954452-26954548)
chr8 (97-167)||(13144004-13144073)
chr8 (92-140)||(2628249-2628297)
chr8 (101-141)||(5217428-5217468)
chr8 (69-121)||(8673385-8673437)
[»] chr6 (11 HSPs)
chr6 (7-141)||(7274958-7275092)
chr6 (59-167)||(11082302-11082410)
chr6 (59-167)||(21542414-21542522)
chr6 (59-167)||(3095776-3095884)
chr6 (59-141)||(34177724-34177806)
chr6 (52-141)||(12461512-12461601)
chr6 (53-133)||(9428760-9428840)
chr6 (53-165)||(30794251-30794363)
chr6 (59-141)||(35129138-35129220)
chr6 (52-133)||(17751835-17751916)
chr6 (53-139)||(31107181-31107266)
[»] chr2 (34 HSPs)
chr2 (53-167)||(45660355-45660469)
chr2 (53-165)||(33198689-33198801)
chr2 (53-167)||(45085247-45085361)
chr2 (53-167)||(6110255-6110371)
chr2 (53-141)||(41528246-41528334)
chr2 (52-167)||(19264088-19264204)
chr2 (53-167)||(14873952-14874067)
chr2 (7-141)||(25571990-25572123)
chr2 (53-167)||(3201316-3201430)
chr2 (52-140)||(28858298-28858386)
chr2 (53-140)||(28599231-28599318)
chr2 (7-141)||(8701547-8701680)
chr2 (59-140)||(35517119-35517200)
chr2 (7-141)||(29524123-29524255)
chr2 (52-140)||(5963190-5963278)
chr2 (52-141)||(6766015-6766105)
chr2 (52-141)||(12938231-12938320)
chr2 (52-141)||(40584480-40584569)
chr2 (52-165)||(33677472-33677585)
chr2 (52-167)||(11617013-11617128)
chr2 (57-141)||(24204611-24204695)
chr2 (54-141)||(39696881-39696968)
chr2 (53-113)||(30421292-30421352)
chr2 (53-133)||(30830686-30830766)
chr2 (59-133)||(44454987-44455061)
chr2 (53-141)||(7645309-7645400)
chr2 (54-141)||(9864801-9864886)
chr2 (92-138)||(5280592-5280638)
chr2 (69-165)||(9709519-9709615)
chr2 (69-127)||(11031019-11031077)
chr2 (84-141)||(35115886-35115943)
chr2 (52-127)||(35022886-35022961)
chr2 (69-165)||(8032726-8032823)
chr2 (69-121)||(32010108-32010160)
[»] chr7 (30 HSPs)
chr7 (53-167)||(6191035-6191149)
chr7 (52-167)||(25944565-25944680)
chr7 (53-167)||(18102520-18102634)
chr7 (59-167)||(14805866-14805974)
chr7 (59-167)||(15252860-15252968)
chr7 (59-167)||(25737683-25737791)
chr7 (52-167)||(20123736-20123851)
chr7 (7-141)||(22632033-22632167)
chr7 (59-167)||(35923248-35923356)
chr7 (59-167)||(45485951-45486059)
chr7 (59-167)||(46760313-46760421)
chr7 (53-167)||(4910689-4910803)
chr7 (53-141)||(47557683-47557771)
chr7 (59-141)||(19912851-19912933)
chr7 (7-167)||(9158036-9158193)
chr7 (59-141)||(47779600-47779682)
chr7 (52-132)||(2610659-2610739)
chr7 (52-121)||(11780007-11780076)
chr7 (52-133)||(14574553-14574634)
chr7 (52-133)||(15995708-15995789)
chr7 (53-141)||(44682868-44682955)
chr7 (60-141)||(27810817-27810898)
chr7 (53-100)||(12633110-12633157)
chr7 (69-140)||(38260322-38260393)
chr7 (59-141)||(19492477-19492559)
chr7 (59-140)||(4237798-4237879)
chr7 (54-103)||(35068955-35069004)
chr7 (68-121)||(21654182-21654235)
chr7 (68-141)||(35084142-35084215)
chr7 (65-141)||(48413723-48413796)
[»] chr1 (62 HSPs)
chr1 (7-167)||(6785402-6785560)
chr1 (7-141)||(16854084-16854218)
chr1 (52-167)||(15959697-15959812)
chr1 (53-167)||(32624062-32624176)
chr1 (8-167)||(33431507-33431663)
chr1 (7-167)||(45226083-45226242)
chr1 (7-167)||(47600096-47600255)
chr1 (53-167)||(12449024-12449138)
chr1 (53-167)||(39555643-39555757)
chr1 (52-141)||(39932655-39932744)
chr1 (7-141)||(33369499-33369629)
chr1 (52-167)||(6786827-6786942)
chr1 (53-167)||(2126028-2126142)
chr1 (52-141)||(28120838-28120927)
chr1 (53-167)||(42965872-42965985)
chr1 (52-167)||(3875074-3875193)
chr1 (53-167)||(32983228-32983341)
chr1 (52-141)||(37735466-37735555)
chr1 (52-140)||(6787074-6787161)
chr1 (59-167)||(35691388-35691497)
chr1 (54-141)||(40718669-40718756)
chr1 (54-140)||(2246098-2246184)
chr1 (59-141)||(24190466-24190547)
chr1 (170-240)||(33431734-33431804)
chr1 (52-133)||(46542973-46543052)
chr1 (52-167)||(47014548-47014662)
chr1 (52-140)||(23392250-23392337)
chr1 (7-141)||(24728710-24728842)
chr1 (7-140)||(3076241-3076372)
chr1 (52-167)||(7468020-7468135)
chr1 (53-167)||(43667360-43667472)
chr1 (7-113)||(50665208-50665313)
chr1 (54-125)||(1820406-1820477)
chr1 (75-140)||(7876026-7876091)
chr1 (60-141)||(10558839-10558920)
chr1 (53-167)||(46818559-46818673)
chr1 (52-167)||(50369947-50370065)
chr1 (7-163)||(28016807-28016959)
chr1 (52-133)||(13136644-13136722)
chr1 (7-141)||(44148919-44149047)
chr1 (52-140)||(50012580-50012667)
chr1 (69-165)||(5858430-5858526)
chr1 (81-139)||(298754-298812)
chr1 (53-141)||(3861778-3861864)
chr1 (53-141)||(25391674-25391760)
chr1 (53-140)||(47302989-47303077)
chr1 (69-165)||(5950445-5950541)
chr1 (74-141)||(42724105-42724172)
chr1 (69-126)||(8889788-8889845)
chr1 (52-97)||(11241032-11241077)
chr1 (77-141)||(14086966-14087028)
chr1 (59-165)||(43765290-43765396)
chr1 (97-141)||(32318643-32318687)
chr1 (69-165)||(16688142-16688238)
chr1 (69-165)||(37538815-37538911)
chr1 (74-140)||(47026658-47026725)
chr1 (84-126)||(32742300-32742342)
chr1 (52-97)||(1034847-1034892)
chr1 (109-167)||(11241073-11241131)
chr1 (68-121)||(23873933-23873986)
chr1 (92-141)||(34102056-34102105)
chr1 (69-114)||(43359696-43359741)
[»] chr5 (41 HSPs)
chr5 (53-167)||(11261941-11262055)
chr5 (52-163)||(20039091-20039202)
chr5 (52-167)||(20644003-20644118)
chr5 (53-167)||(32110992-32111106)
chr5 (7-167)||(42273595-42273751)
chr5 (59-167)||(6686380-6686488)
chr5 (7-141)||(4463305-4463438)
chr5 (53-167)||(37562819-37562933)
chr5 (52-140)||(38130200-38130288)
chr5 (59-167)||(43590019-43590127)
chr5 (53-167)||(37522646-37522761)
chr5 (52-167)||(38280836-38280951)
chr5 (6-141)||(19413085-19413219)
chr5 (52-134)||(5984205-5984287)
chr5 (7-141)||(25840809-25840942)
chr5 (52-167)||(34425320-34425434)
chr5 (53-163)||(32017694-32017803)
chr5 (7-133)||(8225409-8225531)
chr5 (6-141)||(39505316-39505448)
chr5 (52-141)||(9957502-9957588)
chr5 (59-141)||(17351384-17351466)
chr5 (7-139)||(41625596-41625727)
chr5 (52-141)||(11858309-11858398)
chr5 (52-141)||(43454406-43454495)
chr5 (53-105)||(12730099-12730151)
chr5 (97-141)||(12792859-12792903)
chr5 (69-165)||(12912353-12912449)
chr5 (55-105)||(23233391-23233441)
chr5 (52-105)||(104341-104394)
chr5 (59-140)||(7071234-7071315)
chr5 (53-105)||(12792919-12792972)
chr5 (64-141)||(42104331-42104408)
chr5 (97-141)||(12729957-12730001)
chr5 (69-165)||(10153987-10154083)
chr5 (74-140)||(8146734-8146800)
chr5 (97-138)||(23233445-23233486)
chr5 (53-117)||(445996-446060)
chr5 (59-134)||(1238522-1238597)
chr5 (69-165)||(3463874-3463970)
chr5 (67-141)||(29493595-29493669)
chr5 (100-165)||(5369090-5369155)
[»] chr4 (42 HSPs)
chr4 (52-141)||(29203493-29203582)
chr4 (52-167)||(20716167-20716282)
chr4 (7-141)||(35310818-35310951)
chr4 (52-141)||(1585423-1585512)
chr4 (53-167)||(14332748-14332862)
chr4 (53-167)||(20281579-20281693)
chr4 (53-167)||(26916313-26916427)
chr4 (7-167)||(4058658-4058817)
chr4 (59-167)||(47867873-47867981)
chr4 (59-167)||(2229241-2229349)
chr4 (52-141)||(5483354-5483443)
chr4 (53-167)||(41414661-41414774)
chr4 (7-140)||(52535662-52535794)
chr4 (53-167)||(56318120-56318234)
chr4 (52-141)||(17794617-17794706)
chr4 (65-167)||(24940365-24940467)
chr4 (52-141)||(39078144-39078233)
chr4 (53-141)||(35529660-35529748)
chr4 (7-141)||(42915473-42915606)
chr4 (52-167)||(55580656-55580772)
chr4 (52-167)||(10069684-10069799)
chr4 (53-141)||(28669077-28669164)
chr4 (53-141)||(50080527-50080615)
chr4 (81-167)||(16604896-16604982)
chr4 (7-141)||(48793704-48793834)
chr4 (7-140)||(8683383-8683512)
chr4 (81-167)||(7654633-7654719)
chr4 (52-141)||(50145723-50145812)
chr4 (53-141)||(25297298-25297386)
chr4 (69-141)||(8178315-8178387)
chr4 (52-100)||(21722783-21722831)
chr4 (74-141)||(17799210-17799277)
chr4 (82-140)||(5815486-5815544)
chr4 (53-115)||(14583717-14583779)
chr4 (53-141)||(12002716-12002799)
chr4 (69-141)||(47516267-47516339)
chr4 (53-100)||(32280104-32280151)
chr4 (52-141)||(19351833-19351923)
chr4 (52-121)||(32323358-32323426)
chr4 (69-126)||(53848471-53848528)
chr4 (92-140)||(5841856-5841904)
chr4 (100-165)||(46070574-46070639)
[»] scaffold0062 (1 HSPs)
scaffold0062 (52-167)||(44828-44943)
[»] scaffold0442 (1 HSPs)
scaffold0442 (53-167)||(10035-10149)
[»] scaffold0774 (1 HSPs)
scaffold0774 (55-167)||(3485-3597)
[»] scaffold0018 (1 HSPs)
scaffold0018 (53-167)||(154851-154965)
[»] scaffold0300 (1 HSPs)
scaffold0300 (59-167)||(630-738)
[»] scaffold0009 (2 HSPs)
scaffold0009 (7-141)||(157740-157872)
scaffold0009 (52-141)||(52685-52774)
[»] scaffold0045 (1 HSPs)
scaffold0045 (53-167)||(77947-78061)
[»] scaffold0132 (2 HSPs)
scaffold0132 (52-127)||(1001-1076)
scaffold0132 (52-127)||(8961-9036)
[»] scaffold0111 (1 HSPs)
scaffold0111 (58-141)||(40174-40257)
[»] scaffold0012 (1 HSPs)
scaffold0012 (52-138)||(160239-160325)
[»] scaffold0005 (1 HSPs)
scaffold0005 (53-115)||(233596-233658)
[»] scaffold1786 (1 HSPs)
scaffold1786 (52-100)||(853-900)


Alignment Details
Target: chr3 (Bit Score: 91; Significance: 3e-44; HSPs: 55)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 167
Target Start/End: Original strand, 35963093 - 35963260
Alignment:
Q  1 ttctcttatttaatcttgtttttaaaacaaaa-tcatcttttccnnnnnnnncttttgtttattctcataaaaataaatgcaaattacatttaattttct 99  Q
    ||||| ||||||||||||||||||||| |||| ||||||||||         ||||||||||||||||||||| |||||||||||| |||||||||||||    
T  35963093 ttctcctatttaatcttgtttttaaaaaaaaaatcatcttttctaagaaatacttttgtttattctcataaaattaaatgcaaattgcatttaattttct 35963192  T
Q  100 ctctctttcattttctccataaccaatagccaataaaaattgnnnnnnnatcttcctataaaactttt 167  Q
    |||||||||||||||||||||||||||| |||||||||||||       |||||||||||||||||||    
T  35963193 ctctctttcattttctccataaccaataaccaataaaaattgtttttccatcttcctataaaactttt 35963260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 53 - 167
Target Start/End: Original strand, 6438077 - 6438191
Alignment:
Q  53 ttttgtttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaattgnnnnnnnatct 152  Q
    |||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||       ||||    
T  6438077 ttttgtttattctcataaaattaaatgcaaattacatttaattttatctctctttcattttctccataaccaatagccaatgaaaattgtttttacatct 6438176  T
Q  153 tcctataaaactttt 167  Q
    ||||||||| |||||    
T  6438177 tcctataaagctttt 6438191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 52 - 167
Target Start/End: Complemental strand, 579269 - 579154
Alignment:
Q  52 cttttgtttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaattgnnnnnnnatc 151  Q
    |||||||||| |||||||||| ||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||| |||||||       |||    
T  579269 cttttgtttaatctcataaaattaaatgcaaattacattcaattttctctctctttcattttttccataaccaatagccaatgaaaattgtttttatatc 579170  T
Q  152 ttcctataaaactttt 167  Q
    ||||||||||||||||    
T  579169 ttcctataaaactttt 579154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 4 - 167
Target Start/End: Original strand, 28875353 - 28875514
Alignment:
Q  4 tcttatttaatcttgtttttaaaacaaaatcatcttttccnnnnnnnncttttgtttattctcataaaaataaatgcaaattacatttaattttctctct 103  Q
    |||||||||||||||||||||||| |||||| |||||||         ||||||||||||||||||||| ||||| ||||||||||| |||||||| | |    
T  28875353 tcttatttaatcttgtttttaaaa-aaaatc-tcttttctaagaaaaacttttgtttattctcataaaattaaatacaaattacattcaattttcttttt 28875450  T
Q  104 ctttcattttctccataaccaatagccaataaaaattgnnnnnnnatcttcctataaaactttt 167  Q
    |||||||||||||||||||||||||||||| |||||||       |||||| ||||||||||||    
T  28875451 ctttcattttctccataaccaatagccaatgaaaattgtttttacatcttcttataaaactttt 28875514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 54 - 167
Target Start/End: Complemental strand, 50651166 - 50651053
Alignment:
Q  54 tttgtttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaattgnnnnnnnatctt 153  Q
    |||| |||||||||||||| ||||||||||||||||| |||||||||||||||| |||||||||||||||||||| |||| |||||||       |||||    
T  50651166 tttgattattctcataaaattaaatgcaaattacattcaattttctctctcttttattttctccataaccaatagtcaatgaaaattgtttttacatctt 50651067  T
Q  154 cctataaaactttt 167  Q
    ||||||||||||||    
T  50651066 cctataaaactttt 50651053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 7 - 140
Target Start/End: Original strand, 2927238 - 2927370
Alignment:
Q  7 tatttaatcttgtttttaaaacaaaatcatcttttccnnnnnnnncttttgtttattctcataaaaataaatgcaaattacatttaattttctctctctt 106  Q
    ||||||||||||||||||||| |||||||||||||||        |||||| |||||||||| ||| ||||| |||||||||||||||||||||||||||    
T  2927238 tatttaatcttgtttttaaaa-aaaatcatcttttccaataaaaacttttgcttattctcatgaaattaaatacaaattacatttaattttctctctctt 2927336  T
Q  107 tcattttctccataaccaatagccaataaaaatt 140  Q
      ||||| | ||||||||||||||||| ||||||    
T  2927337 ctatttttttcataaccaatagccaatgaaaatt 2927370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 52 - 141
Target Start/End: Original strand, 6075074 - 6075163
Alignment:
Q  52 cttttgtttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaattg 141  Q
    ||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||| | |||||||||| |||||| |||||||    
T  6075074 cttttgtttattctcataaaattaaatgcaaattacattcaattttctctctctttcattttttgcataaccaatggccaatgaaaattg 6075163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 52 - 141
Target Start/End: Complemental strand, 14752339 - 14752250
Alignment:
Q  52 cttttgtttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaattg 141  Q
    ||||| ||||||||||||||| ||||||||||||||||| |||||||||||||||||||||| |||||||||||||| |||| |||||||    
T  14752339 cttttctttattctcataaaattaaatgcaaattacattcaattttctctctctttcattttttccataaccaatagtcaatgaaaattg 14752250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 53 - 167
Target Start/End: Original strand, 36546536 - 36546650
Alignment:
Q  53 ttttgtttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaattgnnnnnnnatct 152  Q
    |||||||||||||||||||| ||||||||||||||||| |||| ||||||||||||||||| || |||||||||||||||| |||||||       ||||    
T  36546536 ttttgtttattctcataaaattaaatgcaaattacattaaattctctctctctttcattttttctataaccaatagccaatgaaaattggttttacatct 36546635  T
Q  153 tcctataaaactttt 167  Q
    |||||| ||||||||    
T  36546636 tcctatgaaactttt 36546650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 53 - 167
Target Start/End: Complemental strand, 36561779 - 36561665
Alignment:
Q  53 ttttgtttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaattgnnnnnnnatct 152  Q
    |||||||||||||||||||| ||||||||||||||||| |||| ||||||||||||||||| || |||||||||||||||| |||||||       ||||    
T  36561779 ttttgtttattctcataaaattaaatgcaaattacattaaattctctctctctttcattttttctataaccaatagccaatgaaaattggttttacatct 36561680  T
Q  153 tcctataaaactttt 167  Q
    |||||| ||||||||    
T  36561679 tcctatgaaactttt 36561665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 59 - 167
Target Start/End: Complemental strand, 37042541 - 37042433
Alignment:
Q  59 ttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaattgnnnnnnnatcttcctat 158  Q
    |||||||||||||| ||||||||||||||||| |||||||||| ||||||||||| ||||||| ||||||||||| |||||||       ||||||||||    
T  37042541 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataatcaatagccaatgaaaattgtttttacatcttcctat 37042442  T
Q  159 aaaactttt 167  Q
    |||||||||    
T  37042441 aaaactttt 37042433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 7 - 140
Target Start/End: Complemental strand, 46557376 - 46557244
Alignment:
Q  7 tatttaatcttgtttttaaaacaaaatcatcttttccnnnnnnnncttttgtttattctcataaaaataaatgcaaattacatttaattttctctctctt 106  Q
    |||||||  |||||||||||| |||||||| ||||||        |||||| |||||||||| ||| |||||| ||||||||||||||||||||||||||    
T  46557376 tatttaactttgtttttaaaa-aaaatcatattttccaataaaaacttttgcttattctcatgaaattaaatgtaaattacatttaattttctctctctt 46557278  T
Q  107 tcattttctccataaccaatagccaataaaaatt 140  Q
    ||||||| |||||||| |||||||||| ||||||    
T  46557277 tcattttttccataactaatagccaatgaaaatt 46557244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 53 - 167
Target Start/End: Original strand, 47864185 - 47864299
Alignment:
Q  53 ttttgtttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaattgnnnnnnnatct 152  Q
    |||||||||||||||||||| ||||||||||||||||| |||||| ||||||||||||||| | ||||| |||||| |||| |||||||       ||||    
T  47864185 ttttgtttattctcataaaattaaatgcaaattacattcaattttttctctctttcatttttttcataatcaatagtcaatgaaaattgtttttacatct 47864284  T
Q  153 tcctataaaactttt 167  Q
    |||||||||||||||    
T  47864285 tcctataaaactttt 47864299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 52 - 141
Target Start/End: Complemental strand, 54465026 - 54464937
Alignment:
Q  52 cttttgtttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaattg 141  Q
    ||||||||||||||||||||| |||| |||||||||||| |||||||||||||||||| ||| ||||||||||||||||||  |||||||    
T  54465026 cttttgtttattctcataaaattaaacgcaaattacattcaattttctctctctttcactttttccataaccaatagccaacgaaaattg 54464937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 7 - 122
Target Start/End: Original strand, 9263956 - 9264071
Alignment:
Q  7 tatttaatcttgtttttaaaacaaaatcatcttttccnnnnnnnncttttgtttattctcataaaaataaatgcaaattacatttaattttctctctctt 106  Q
    |||||||||||  |||||||| |||||||||||||||         |||||||||||||||||||| |||||||||||||||| ||||||| ||||||||    
T  9263956 tatttaatcttagttttaaaaaaaaatcatcttttccaataattgtttttgtttattctcataaaattaaatgcaaattacatctaattttatctctctt 9264055  T
Q  107 tcattttctccataac 122  Q
    ||||||||||| ||||    
T  9264056 tcattttctccgtaac 9264071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 59 - 167
Target Start/End: Complemental strand, 23311717 - 23311609
Alignment:
Q  59 ttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaattgnnnnnnnatcttcctat 158  Q
    |||||||||||||| |||||| | |||||||| |||||||||| ||||||||||| ||||||||||||||||||| |||||||       ||||||||||    
T  23311717 ttattctcataaaattaaatgtatattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 23311618  T
Q  159 aaaactttt 167  Q
    |||||||||    
T  23311617 aaaactttt 23311609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 53 - 128
Target Start/End: Complemental strand, 33974689 - 33974614
Alignment:
Q  53 ttttgtttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatag 128  Q
    |||||||||||||||||||| ||||||||||||||||| |||||||| ||||||||||||| ||||||||||||||    
T  33974689 ttttgtttattctcataaaattaaatgcaaattacattaaattttctttctctttcattttttccataaccaatag 33974614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 52 - 167
Target Start/End: Complemental strand, 7866614 - 7866499
Alignment:
Q  52 cttttgtttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaattgnnnnnnnatc 151  Q
    ||||||||||||||||||||| |||||| |||||||||| |||||||| ||||||| ||||| |||||||||||||| |||| |||||||       |||    
T  7866614 cttttgtttattctcataaaattaaatgaaaattacattcaattttctatctcttttattttttccataaccaatagtcaatgaaaattgtttttacatc 7866515  T
Q  152 ttcctataaaactttt 167  Q
    ||| ||||||||||||    
T  7866514 ttcttataaaactttt 7866499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 53 - 167
Target Start/End: Original strand, 37074952 - 37075068
Alignment:
Q  53 ttttgtttattctcataaaaataaatgcaaattacatttaattt--tctctctctttcattttctccataaccaatagccaataaaaattgnnnnnnnat 150  Q
    |||||||||||||||||||| ||||||||||||||||| |||||  || |||| ||||||||| || |||||||||||||||| |||||||       ||    
T  37074952 ttttgtttattctcataaaattaaatgcaaattacattcaattttatcgctctttttcattttttctataaccaatagccaatgaaaattgtgtttacat 37075051  T
Q  151 cttcctataaaactttt 167  Q
    |||||||||||||||||    
T  37075052 cttcctataaaactttt 37075068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 53 - 140
Target Start/End: Complemental strand, 32619960 - 32619873
Alignment:
Q  53 ttttgtttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaatt 140  Q
    ||||||||||||| |||||| ||||||||||||||||| |||||||||||| |  || ||||||||||||||||||||||| ||||||    
T  32619960 ttttgtttattctaataaaattaaatgcaaattacattcaattttctctctatcccaatttctccataaccaatagccaatgaaaatt 32619873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 55 - 133
Target Start/End: Original strand, 8703105 - 8703182
Alignment:
Q  55 ttgtttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaat 133  Q
    |||||||||||||||||| ||||||||||||||||| |||||||| ||||||||||||| ||||||| |||||||||||    
T  8703105 ttgtttattctcataaaattaaatgcaaattacattaaattttctttctctttcatttt-tccataatcaatagccaat 8703182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 55 - 133
Target Start/End: Original strand, 9054992 - 9055069
Alignment:
Q  55 ttgtttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaat 133  Q
    |||||||||||||||||| ||||||||||||||||| |||||||| ||||||||||||| ||||||| |||||||||||    
T  9054992 ttgtttattctcataaaattaaatgcaaattacattaaattttctttctctttcatttt-tccataatcaatagccaat 9055069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 59 - 167
Target Start/End: Complemental strand, 11054432 - 11054328
Alignment:
Q  59 ttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaattgnnnnnnnatcttcctat 158  Q
    |||||||||||||| ||||||||||||||||| |||||    ||||||||||||| ||||||||||||||||||| |||||||       ||||||||||    
T  11054432 ttattctcataaaattaaatgcaaattacattcaattt----tctctttcattttttccataaccaatagccaatgaaaattgtttttaaatcttcctat 11054337  T
Q  159 aaaactttt 167  Q
    |||||||||    
T  11054336 aaaactttt 11054328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 52 - 167
Target Start/End: Complemental strand, 46711788 - 46711674
Alignment:
Q  52 cttttgtttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaattgnnnnnnnatc 151  Q
    |||||||||||| |||||||| ||||| ||||||||||| || ||||||||||||||||||| | ||||||||||||||||| || ||||       |||    
T  46711788 cttttgtttattttcataaaattaaatacaaattacattcaaatttctctctctttcatttt-ttcataaccaatagccaatgaatattgtttttacatc 46711690  T
Q  152 ttcctataaaactttt 167  Q
    ||||||||||||||||    
T  46711689 ttcctataaaactttt 46711674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 53 - 140
Target Start/End: Original strand, 53270227 - 53270316
Alignment:
Q  53 ttttgtttattctcataaaaataaatgcaaattacatttaattttc--tctctctttcattttctccataaccaatagccaataaaaatt 140  Q
    |||||||||||||||||||| ||||| ||||||||||| |||||||  ||||||||||||||| |||||||||||||| |||| ||||||    
T  53270227 ttttgtttattctcataaaattaaatacaaattacattcaattttctttctctctttcattttttccataaccaataggcaatgaaaatt 53270316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 52 - 141
Target Start/End: Original strand, 6752663 - 6752752
Alignment:
Q  52 cttttgtttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaattg 141  Q
    |||||| ||||| |||| ||| ||||||||||||||||| | ||| ||||||||| |||||||||||||||||||||||||| |||||||    
T  6752663 cttttgcttattttcatgaaattaaatgcaaattacattcattttcctctctcttccattttctccataaccaatagccaattaaaattg 6752752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 53 - 113
Target Start/End: Complemental strand, 48802610 - 48802550
Alignment:
Q  53 ttttgtttattctcataaaaataaatgcaaattacatttaattttctctctctttcatttt 113  Q
    |||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||    
T  48802610 ttttgtttattctcataaaagtaaatgcaaattacattcaattttctctctctttcatttt 48802550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 7 - 167
Target Start/End: Original strand, 19464024 - 19464183
Alignment:
Q  7 tatttaatcttgtttttaaaacaaaatcatcttttccnnnnnnnncttttgtttattctcataaaaataaatgcaaattacatttaattttctctctctt 106  Q
    ||||||||||||||||||||| |||||| |||||| |        ||||||||||||||||||||   |||||||||||||||| || ||| ||||||||    
T  19464024 tatttaatcttgtttttaaaaaaaaatc-tctttttcaagaaaaacttttgtttattctcataaactgaaatgcaaattacattcaactttttctctctt 19464122  T
Q  107 tcattttctccataaccaatagccaataaaaattgnnnnnnnatcttcctataaaactttt 167  Q
    |||||||  ||||||||||||   ||| |||||||       |||||||||||||||||||    
T  19464123 tcatttttcccataaccaataataaatgaaaattgtttttcaatcttcctataaaactttt 19464183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 60 - 141
Target Start/End: Complemental strand, 20847391 - 20847310
Alignment:
Q  60 tattctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaattg 141  Q
    ||||||||||||| ||||||||||||||||| ||||||  |||||||||||||||||||||| ||||  ||||| |||||||    
T  20847391 tattctcataaaattaaatgcaaattacattcaatttttcctctctttcattttctccataatcaattaccaatgaaaattg 20847310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 54 - 139
Target Start/End: Complemental strand, 47867041 - 47866957
Alignment:
Q  54 tttgtttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaat 139  Q
    |||| |||||||||||||  ||||||||||||||||| ||||||||||||||| || ||||||||||| ||||||||||| |||||    
T  47867041 tttgcttattctcataaat-taaatgcaaattacattcaattttctctctcttccactttctccataatcaatagccaatgaaaat 47866957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 59 - 167
Target Start/End: Original strand, 30189570 - 30189679
Alignment:
Q  59 ttattctcataaaaataaatgcaaattacatttaattttctctctctttca-ttttctccataaccaatagccaataaaaattgnnnnnnnatcttccta 157  Q
    |||||||| ||||| |||||| |||||||||| ||| |||||| ||||||| |||| ||||||||||||||||||| |||||||       |||||||||    
T  30189570 ttattctcgtaaaattaaatgtaaattacattcaatattctctttctttcatttttttccataaccaatagccaatgaaaattgtttttacatcttccta 30189669  T
Q  158 taaaactttt 167  Q
    ||||||||||    
T  30189670 taaaactttt 30189679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 53 - 133
Target Start/End: Original strand, 50730103 - 50730183
Alignment:
Q  53 ttttgtttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaat 133  Q
    |||||||||||||| ||||| |||||| |||||||||| |||||||||||| ||| ||||| |||||||||||||| ||||    
T  50730103 ttttgtttattctcttaaaattaaatgtaaattacattcaattttctctcttttttattttttccataaccaatagtcaat 50730183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 53 - 133
Target Start/End: Complemental strand, 50782751 - 50782671
Alignment:
Q  53 ttttgtttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaat 133  Q
    |||||||||||||| ||||| |||||| |||||||||| |||||||||||| ||| ||||| |||||||||||||| ||||    
T  50782751 ttttgtttattctcttaaaattaaatgtaaattacattcaattttctctcttttttattttttccataaccaatagtcaat 50782671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 64 - 141
Target Start/End: Complemental strand, 34722724 - 34722647
Alignment:
Q  64 ctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaattg 141  Q
    ||||||||| |||||| |||||||||| |||||||||||  ||||||||| | ||||||||||||||||| |||||||    
T  34722724 ctcataaaattaaatgtaaattacattcaattttctctccttttcattttttgcataaccaatagccaatgaaaattg 34722647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 59 - 141
Target Start/End: Original strand, 3972275 - 3972357
Alignment:
Q  59 ttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaattg 141  Q
    |||||||||| ||| ||||||||||||||||| |||||  |||||||| |||||||| | ||||||||||| ||| |||||||    
T  3972275 ttattctcatgaaattaaatgcaaattacattcaatttgttctctcttccattttcttcctaaccaatagctaatgaaaattg 3972357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 59 - 141
Target Start/End: Complemental strand, 3997603 - 3997521
Alignment:
Q  59 ttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaattg 141  Q
    |||||||||| ||| ||||||||||||||||| |||||  |||||||| |||||||| | ||||||||||| ||| |||||||    
T  3997603 ttattctcatgaaattaaatgcaaattacattcaatttgttctctcttccattttcttcctaaccaatagctaatgaaaattg 3997521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 59 - 141
Target Start/End: Original strand, 38674870 - 38674952
Alignment:
Q  59 ttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaattg 141  Q
    ||||||| || ||| ||||| ||||||| ||| |||||||||||||||||||||||| ||||| |||||| |||| |||||||    
T  38674870 ttattcttatgaaattaaatacaaattagattcaattttctctctctttcattttcttcataatcaatagtcaatgaaaattg 38674952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 52 - 126
Target Start/End: Complemental strand, 41476460 - 41476386
Alignment:
Q  52 cttttgtttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaat 126  Q
    ||||||||||||||||||||| ||||||||||||| ||| |||||||| || |||||||||| ||| || |||||    
T  41476460 cttttgtttattctcataaaattaaatgcaaattagattcaattttctttccctttcattttttccctagccaat 41476386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 52 - 141
Target Start/End: Original strand, 26208007 - 26208096
Alignment:
Q  52 cttttgtttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaattg 141  Q
    |||||| |||||||||||||   |||||| ||||||||| |||||||||| |||| ||||||||||| ||  |||||||||| |||||||    
T  26208007 cttttgcttattctcataaattcaaatgccaattacattcaattttctctttcttccattttctccacaataaatagccaatgaaaattg 26208096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 52 - 141
Target Start/End: Complemental strand, 26725122 - 26725033
Alignment:
Q  52 cttttgtttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaattg 141  Q
    ||||| ||||||||||| ||| || |||||||||||||| | |||| ||||||||  ||||||||||||| ||||| ||||| |||||||    
T  26725122 cttttatttattctcatgaaattatatgcaaattacattcagttttatctctcttctattttctccataatcaataaccaatgaaaattg 26725033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 69 - 137
Target Start/End: Complemental strand, 30454838 - 30454770
Alignment:
Q  69 aaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaa 137  Q
    |||| |||||||||| | |||| ||||| ||||||||||||||||||| |||||||||| |||||||||    
T  30454838 aaaattaaatgcaaagtgcattcaatttgctctctctttcattttctcaataaccaataaccaataaaa 30454770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 69 - 165
Target Start/End: Original strand, 34194892 - 34194988
Alignment:
Q  69 aaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaattgnnnnnnnatcttcctataaaactt 165  Q
    |||| |||||||||| | |||| | ||| ||||||||||||||||||| |||||||||| ||||| |||||||       |||||||||||||||||    
T  34194892 aaaattaaatgcaaagtgcattcagtttgctctctctttcattttctcaataaccaataaccaatgaaaattgtttttacatcttcctataaaactt 34194988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 53 - 140
Target Start/End: Original strand, 29235187 - 29235268
Alignment:
Q  53 ttttgtttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaatt 140  Q
    ||||||||||| |||| ||| |||||| |||||||||| ||||      |||||||||||| ||||||||||||||||||| ||||||    
T  29235187 ttttgtttattatcattaaattaaatgtaaattacattcaatt------ctctttcattttttccataaccaatagccaatgaaaatt 29235268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 69 - 121
Target Start/End: Original strand, 38401384 - 38401436
Alignment:
Q  69 aaaaataaatgcaaattacatttaattttctctctctttcattttctccataa 121  Q
    |||| |||||||||| ||||||||||||||||||| |||||||||||| ||||    
T  38401384 aaaattaaatgcaaagtacatttaattttctctctttttcattttctctataa 38401436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 59 - 126
Target Start/End: Complemental strand, 41936313 - 41936248
Alignment:
Q  59 ttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaat 126  Q
    |||||||||| ||| |||||||||||| |||| |||||||||||||   |||||||||||||||||||    
T  41936313 ttattctcatgaaactaaatgcaaattgcattcaattttctctctc--ccattttctccataaccaat 41936248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 69 - 140
Target Start/End: Complemental strand, 8097132 - 8097061
Alignment:
Q  69 aaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaatt 140  Q
    |||| |||||||||| | |||| ||||| ||||||||||||||||||| |||| ||||| ||||| ||||||    
T  8097132 aaaattaaatgcaaagtgcattcaatttgctctctctttcattttctcaataagcaataaccaatgaaaatt 8097061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 75 - 141
Target Start/End: Complemental strand, 7886725 - 7886659
Alignment:
Q  75 aaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaattg 141  Q
    ||||||||| | |||| ||||| ||||||||||||||||||| ||||| |||| ||||| |||||||    
T  7886725 aaatgcaaagtgcattcaatttgctctctctttcattttctcaataactaataaccaatgaaaattg 7886659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 53 - 98
Target Start/End: Complemental strand, 23910625 - 23910580
Alignment:
Q  53 ttttgtttattctcataaaaataaatgcaaattacatttaattttc 98  Q
    ||||||||||||||||| || ||||||||||||||||| |||||||    
T  23910625 ttttgtttattctcatataattaaatgcaaattacattcaattttc 23910580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 100 - 165
Target Start/End: Complemental strand, 46918296 - 46918231
Alignment:
Q  100 ctctctttcattttctccataaccaatagccaataaaaattgnnnnnnnatcttcctataaaactt 165  Q
    ||||||||||||||||| |||||||||| ||||| |||||||       |||||||||||||||||    
T  46918296 ctctctttcattttctcaataaccaataaccaatgaaaattgtttttagatcttcctataaaactt 46918231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 53 - 141
Target Start/End: Original strand, 47115843 - 47115931
Alignment:
Q  53 ttttgtttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaattg 141  Q
    ||||| |||||||||| ||| |||||  ||||| ||||||||||||||| | || |||||| ||||||| ||||| ||||  |||||||    
T  47115843 ttttgcttattctcatgaaattaaatataaatttcatttaattttctcttttttccattttatccataatcaataaccaaagaaaattg 47115931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 52 - 115
Target Start/End: Original strand, 31181020 - 31181083
Alignment:
Q  52 cttttgtttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttct 115  Q
    ||||||| ||||||||| ||| |||||| |||||||||||||||||| || ||||  |||||||    
T  31181020 cttttgtctattctcatgaaattaaatgtaaattacatttaattttccctttcttctattttct 31181083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 74 - 132
Target Start/End: Complemental strand, 12128779 - 12128721
Alignment:
Q  74 taaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaa 132  Q
    ||||| ||||||||||||| ||| ||||| ||||||||||||| ||||| |||| ||||    
T  12128779 taaatacaaattacatttattttgctctccctttcattttctctataactaataaccaa 12128721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 58 - 115
Target Start/End: Complemental strand, 36509583 - 36509527
Alignment:
Q  58 tttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttct 115  Q
    ||||||||||| ||| |||||| ||||||||||  ||||||||||| |||||||||||    
T  36509583 tttattctcatcaaattaaatgtaaattacattcgattttctctct-tttcattttct 36509527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 68 - 121
Target Start/End: Original strand, 52252038 - 52252091
Alignment:
Q  68 taaaaataaatgcaaattacatttaattttctctctctttcattttctccataa 121  Q
    ||||| ||||||||| |||||||||||||  ||||| ||| |||||||||||||    
T  52252038 taaaattaaatgcaagttacatttaatttgttctcttttttattttctccataa 52252091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 165
Target Start/End: Complemental strand, 16033094 - 16033005
Alignment:
Q  76 aatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaattgnnnnnnnatcttcctataaaactt 165  Q
    |||||||| | |||| ||||| || ||||||||||||| || ||||| |||| ||||| |||||||       |||||||||||||||||    
T  16033094 aatgcaaagtgcattcaatttgctttctctttcattttttcaataactaataaccaatgaaaattgtttttacatcttcctataaaactt 16033005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 88; Significance: 2e-42; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 7 - 167
Target Start/End: Complemental strand, 43216565 - 43216405
Alignment:
Q  7 tatttaatcttgtttttaaaacaaaatcatcttttccnnnnnnnncttttgtttattctcataaaaataaatgcaaattacatttaattttctctctctt 106  Q
    ||||||||||||||||||||| |||||||||||||||         |||||||||||||||||||| |||||||||||||||||||||||| ||||||||    
T  43216565 tatttaatcttgtttttaaaaaaaaatcatcttttccaataattgtttttgtttattctcataaaattaaatgcaaattacatttaattttatctctctt 43216466  T
Q  107 tcattttctccataaccaatagccaataaaaattgnnnnnnnatcttcctataaaactttt 167  Q
    ||||||||||||||||||||||  ||| |||||||       |||||||||||||||||||    
T  43216465 tcattttctccataaccaatagtgaatgaaaattgtttttacatcttcctataaaactttt 43216405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 7 - 167
Target Start/End: Original strand, 36190715 - 36190874
Alignment:
Q  7 tatttaatcttgtttttaaaacaaaatcatcttttccnnnnnnnncttttgtttattctcataaaaataaatgcaaattacatttaattttctctctctt 106  Q
    ||||||||||||||||||||| |||||| | ||||||        ||||||||||||||||||||| ||||||||||||||||| |||||||||||||||    
T  36190715 tatttaatcttgtttttaaaaaaaaatc-tattttccaagaaaaacttttgtttattctcataaaattaaatgcaaattacattcaattttctctctctt 36190813  T
Q  107 tcattttctccataaccaatagccaataaaaattgnnnnnnnatcttcctataaaactttt 167  Q
    | ||||| ||||||||||||||||||| |||||||       |||||||||||||||||||    
T  36190814 ttattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttt 36190874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 52 - 167
Target Start/End: Complemental strand, 34890347 - 34890232
Alignment:
Q  52 cttttgtttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaattgnnnnnnnatc 151  Q
    ||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||| |||||||       |||    
T  34890347 cttttgtttattctcataaaattaaatgcaaattacattcaattttctctctctttcattttttccataaccaatagccaatgaaaattgtttttacatc 34890248  T
Q  152 ttcctataaaactttt 167  Q
    ||||||||||||||||    
T  34890247 ttcctataaaactttt 34890232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 52 - 167
Target Start/End: Original strand, 31734102 - 31734217
Alignment:
Q  52 cttttgtttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaattgnnnnnnnatc 151  Q
    ||||||||||||||||| ||| ||||||||||||||||| |||||||||||||||||||||| |||||| |||||||||||| |||||||       |||    
T  31734102 cttttgtttattctcatcaaattaaatgcaaattacattcaattttctctctctttcattttttccatatccaatagccaatgaaaattgtttttatatc 31734201  T
Q  152 ttcctataaaactttt 167  Q
    ||||||||||||||||    
T  31734202 ttcctataaaactttt 31734217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 52 - 141
Target Start/End: Original strand, 24892825 - 24892914
Alignment:
Q  52 cttttgtttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaattg 141  Q
    ||||||||||||||||||||| ||||||||||||||||| |||||||| ||||||||||||| ||||||||||||||||||| |||||||    
T  24892825 cttttgtttattctcataaaattaaatgcaaattacattcaattttctatctctttcattttttccataaccaatagccaatgaaaattg 24892914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 52 - 167
Target Start/End: Original strand, 8711863 - 8711979
Alignment:
Q  52 cttttgtttattctcataaaaat-aaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaattgnnnnnnnat 150  Q
    ||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| ||||| ||||||||||||||||||| ||||||        ||    
T  8711863 cttttgtttattctcataaaaattaaatgcaaattacattcaattttctctctctttaattttttccataaccaatagccaatgaaaattatttttacat 8711962  T
Q  151 cttcctataaaactttt 167  Q
    |||||||||||||||||    
T  8711963 cttcctataaaactttt 8711979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 59 - 167
Target Start/End: Complemental strand, 7022569 - 7022461
Alignment:
Q  59 ttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaattgnnnnnnnatcttcctat 158  Q
    |||||||||||||| ||||||||||||||||| |||||||||| ||||||||||| ||||||||||||||||||| ||||||        ||||||||||    
T  7022569 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattatttttatatcttcctat 7022470  T
Q  159 aaaactttt 167  Q
    |||||||||    
T  7022469 aaaactttt 7022461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 7 - 140
Target Start/End: Complemental strand, 4047110 - 4046979
Alignment:
Q  7 tatttaatcttgtttttaaaacaaaatcatcttttccnnnnnnnncttttgtttattctcataaaaataaatgcaaattacatttaattttctctctctt 106  Q
    |||||||||||||||||||||  |||| |||||||||        |||||  |||||||||| ||| |||||||||||||||||||||||||||||||||    
T  4047110 tatttaatcttgtttttaaaa--aaattatcttttccagtaaaaactttttcttattctcatgaaattaaatgcaaattacatttaattttctctctctt 4047013  T
Q  107 tcattttctccataaccaatagccaataaaaatt 140  Q
    | ||||| |||||||||||| |||||| ||||||    
T  4047012 ttattttttccataaccaattgccaatgaaaatt 4046979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 52 - 167
Target Start/End: Original strand, 28348598 - 28348712
Alignment:
Q  52 cttttgtttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaattgnnnnnnnatc 151  Q
    |||| |||||||||||||||| ||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||  ||||||       ||     
T  28348598 ctttggtttattctcataaaattaaatgcaaattacattcaattttctctctctttcatttt-tccataaccaatagccaatggaaattgtttttacata 28348696  T
Q  152 ttcctataaaactttt 167  Q
    ||||||||||||||||    
T  28348697 ttcctataaaactttt 28348712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 53 - 141
Target Start/End: Original strand, 7499714 - 7499803
Alignment:
Q  53 ttttgtttattctcataaaaataaatgcaaattacatttaattttctctctctttca-ttttctccataaccaatagccaataaaaattg 141  Q
    |||||||||||||||||||| |||||| |||||||||| |||||||||||||||||| |||| ||||||||||||||||||| |||||||    
T  7499714 ttttgtttattctcataaaattaaatgtaaattacattcaattttctctctctttcatttttttccataaccaatagccaatgaaaattg 7499803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 53 - 167
Target Start/End: Original strand, 7858516 - 7858630
Alignment:
Q  53 ttttgtttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaattgnnnnnnnatct 152  Q
    |||||||||||||||||||| |||||||||||||| || |||||||||||||||||||||| ||||||| |||| | |||| |||||||       ||||    
T  7858516 ttttgtttattctcataaaattaaatgcaaattactttcaattttctctctctttcattttttccataatcaatggtcaatgaaaattgtttttacatct 7858615  T
Q  153 tcctataaaactttt 167  Q
    |||||||||||||||    
T  7858616 tcctataaaactttt 7858630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 53 - 141
Target Start/End: Complemental strand, 8107789 - 8107702
Alignment:
Q  53 ttttgtttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaattg 141  Q
    |||| ||||||||||||||| ||||||||||||||||| |||||||||||||||||| ||| ||||||||||||||||||| |||||||    
T  8107789 ttttttttattctcataaaattaaatgcaaattacattcaattttctctctctttca-tttatccataaccaatagccaatgaaaattg 8107702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 53 - 141
Target Start/End: Complemental strand, 41086558 - 41086470
Alignment:
Q  53 ttttgtttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaattg 141  Q
    |||||||||||||||||||| ||||||||||||||||| |||||||||||| ||| ||||| ||||| ||||||||||||| |||||||    
T  41086558 ttttgtttattctcataaaattaaatgcaaattacattgaattttctctctgttttattttttccattaccaatagccaatgaaaattg 41086470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 53 - 141
Target Start/End: Complemental strand, 15958085 - 15957995
Alignment:
Q  53 ttttgtttattctcataaaaataaatgcaaattacatttaattttctct--ctctttcattttctccataaccaatagccaataaaaattg 141  Q
    |||||||||||||||||||| ||||||||||||||||| ||||||||||  |||||||||||| ||||||||||||||| ||| |||||||    
T  15958085 ttttgtttattctcataaaattaaatgcaaattacattcaattttctctctctctttcattttttccataaccaatagcaaatgaaaattg 15957995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 52 - 167
Target Start/End: Original strand, 13143751 - 13143866
Alignment:
Q  52 cttttgtttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaattgnnnnnnnatc 151  Q
    ||||||||||||||||||||| ||||||||||||||||| |||||| |||||||||||||||  ||| |||||| ||||||| |||||||       |||    
T  13143751 cttttgtttattctcataaaattaaatgcaaattacattcaattttttctctctttcatttttcccacaaccaacagccaatgaaaattgtttttacatc 13143850  T
Q  152 ttcctataaaactttt 167  Q
    ||||||| ||||||||    
T  13143851 ttcctatgaaactttt 13143866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 53 - 172
Target Start/End: Complemental strand, 34158463 - 34158344
Alignment:
Q  53 ttttgtttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaattgnnnnnnnatct 152  Q
    ||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||  |||| | |||||||||||| |||| |||||||       ||||    
T  34158463 ttttgtttattatcataaaattaaatgcaaattacattcaattttctctctcttttgtttttttcataaccaatagtcaatgaaaattgtttttacatct 34158364  T
Q  153 tcctataaaacttttgttta 172  Q
    ||||||||||||||| ||||    
T  34158363 tcctataaaactttttttta 34158344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 64 - 137
Target Start/End: Complemental strand, 3642130 - 3642057
Alignment:
Q  64 ctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaa 137  Q
    |||||||||  |||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||    
T  3642130 ctcataaaataaaatgcaaattacattcaattttctctctctttcattttttccataaccaatagccaataaaa 3642057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 74 - 141
Target Start/End: Complemental strand, 30575986 - 30575919
Alignment:
Q  74 taaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaattg 141  Q
    |||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  30575986 taaatgcaaattacttttaattttctctctctttcattttttccataaccaatagccaatgaaaattg 30575919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 52 - 167
Target Start/End: Complemental strand, 35456197 - 35456082
Alignment:
Q  52 cttttgtttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaattgnnnnnnnatc 151  Q
    ||||||||||||||||||||| |||||| |||||||||| | |||||||||||||| ||||| |||||||  |||||||||| |||||||       |||    
T  35456197 cttttgtttattctcataaaattaaatgtaaattacattcatttttctctctcttttattttttccataattaatagccaatgaaaattgtttttacatc 35456098  T
Q  152 ttcctataaaactttt 167  Q
    || |||||||||||||    
T  35456097 tttctataaaactttt 35456082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 52 - 141
Target Start/End: Complemental strand, 16879565 - 16879476
Alignment:
Q  52 cttttgtttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaattg 141  Q
    |||||||||||||| || ||| ||||| |||| |||||| ||||||||||||||||||||||| |||||| |||||| ||||||||||||    
T  16879565 cttttgtttattcttatgaaattaaatacaaactacattcaattttctctctctttcattttcaccataatcaatagtcaataaaaattg 16879476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 53 - 133
Target Start/End: Complemental strand, 15824803 - 15824723
Alignment:
Q  53 ttttgtttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaat 133  Q
    |||||||||||||||| ||| |||||| |||||||||| ||||||||||||||| |||||| | |||||||||||||||||    
T  15824803 ttttgtttattctcatgaaattaaatgaaaattacattaaattttctctctcttccatttttttcataaccaatagccaat 15824723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 59 - 167
Target Start/End: Original strand, 26483526 - 26483634
Alignment:
Q  59 ttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaattgnnnnnnnatcttcctat 158  Q
    |||||||| ||||| |||||| |||||||||| |||||||||| ||||||||||| ||||||| ||||||||||| |||||||       |||| |||||    
T  26483526 ttattctcgtaaaattaaatgtaaattacattcaattttctctttctttcattttttccataatcaatagccaatgaaaattgtttttacatctccctat 26483625  T
Q  159 aaaactttt 167  Q
    |||||||||    
T  26483626 aaaactttt 26483634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 52 - 105
Target Start/End: Complemental strand, 13144134 - 13144081
Alignment:
Q  52 cttttgtttattctcataaaaataaatgcaaattacatttaattttctctctct 105  Q
    |||||||||||| |||||||| ||||||||||||||||| ||||||||||||||    
T  13144134 cttttgtttattttcataaaattaaatgcaaattacattcaattttctctctct 13144081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 52 - 141
Target Start/End: Complemental strand, 29920441 - 29920352
Alignment:
Q  52 cttttgtttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaattg 141  Q
    |||||| |||||||||| ||| ||||| | ||||||||| ||||||| |||||||  ||||| ||||||| ||||||||||| |||||||    
T  29920441 cttttgcttattctcatgaaattaaataccaattacattcaattttccctctcttctattttgtccataatcaatagccaatgaaaattg 29920352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 81 - 167
Target Start/End: Original strand, 35525603 - 35525689
Alignment:
Q  81 aaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaattgnnnnnnnatcttcctataaaactttt 167  Q
    |||||||||| |||||||||||||||| ||||| |||||||||||||| |||| |||||||       |||||||| ||||||||||    
T  35525603 aaattacattaaattttctctctcttttattttttccataaccaatagtcaatgaaaattgtttttacatcttcctgtaaaactttt 35525689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 59 - 167
Target Start/End: Original strand, 2052830 - 2052936
Alignment:
Q  59 ttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaattgnnnnnnnatcttcctat 158  Q
    |||||||||| ||| ||||||||||||||||| |||||  ||||||||  ||||||||| || |||||||||||| |||||||       ||||||| ||    
T  2052830 ttattctcatgaaattaaatgcaaattacattcaattt--tctctcttctattttctccctagccaatagccaatgaaaattgtttttacatcttcccat 2052927  T
Q  159 aaaactttt 167  Q
    |||||||||    
T  2052928 aaaactttt 2052936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 52 - 127
Target Start/End: Original strand, 41755913 - 41755987
Alignment:
Q  52 cttttgtttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaata 127  Q
    |||||||||||| |||| ||| |||||| |||||||||| |||||| ||||||||||||||| ||||||| |||||    
T  41755913 cttttgtttattatcatgaaattaaatgtaaattacattcaattttttctctctttcatttt-tccataagcaata 41755987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 73 - 138
Target Start/End: Original strand, 7670748 - 7670813
Alignment:
Q  73 ataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaa 138  Q
    ||||||| |||||||||| |||||||||||| || ||||||||||||||| |||||| ||| ||||    
T  7670748 ataaatgaaaattacattcaattttctctctattccattttctccataactaatagcaaatgaaaa 7670813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 69 - 138
Target Start/End: Original strand, 27819663 - 27819732
Alignment:
Q  69 aaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaa 138  Q
    |||| |||||||||| |||||||||||| ||||| |||| |||||||| ||||||||||  |||||||||    
T  27819663 aaaattaaatgcaaactacatttaatttgctctcccttttattttctctataaccaataatcaataaaaa 27819732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 59 - 103
Target Start/End: Complemental strand, 8709950 - 8709906
Alignment:
Q  59 ttattctcataaaaataaatgcaaattacatttaattttctctct 103  Q
    |||||||||||||| ||||||||||||||||| ||||||||||||    
T  8709950 ttattctcataaaattaaatgcaaattacattcaattttctctct 8709906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 69 - 126
Target Start/End: Complemental strand, 14576301 - 14576244
Alignment:
Q  69 aaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaat 126  Q
    |||| |||||||||| | |||| ||||| ||||||||||||||||||| |||||||||    
T  14576301 aaaattaaatgcaaagtgcattcaatttgctctctctttcattttctcaataaccaat 14576244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 69 - 165
Target Start/End: Original strand, 17713227 - 17713323
Alignment:
Q  69 aaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaattgnnnnnnnatcttcctataaaactt 165  Q
    |||| |||||||||| | |||| ||| | ||||||||| |||||| || |||||||||| ||||| |||||||       |||||||||||||||||    
T  17713227 aaaattaaatgcaaagtgcattcaatgtgctctctcttccattttttcaataaccaataaccaatgaaaattgtttttaaatcttcctataaaactt 17713323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 69 - 165
Target Start/End: Complemental strand, 26954548 - 26954452
Alignment:
Q  69 aaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaattgnnnnnnnatcttcctataaaactt 165  Q
    |||| |||||||||| | |||| | ||| || |||||||||||||||| |||||||| | ||||| |||||||       |||||||||||||||||    
T  26954548 aaaattaaatgcaaagtgcattcattttgctttctctttcattttctcaataaccaacaaccaatgaaaattgtttttacatcttcctataaaactt 26954452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 97 - 167
Target Start/End: Complemental strand, 13144073 - 13144004
Alignment:
Q  97 tctctctctttcattttctccataaccaatagccaataaaaattgnnnnnnnatcttcctataaaactttt 167  Q
    ||||||||||||||||| ||||||||||||| | ||| |||||||       |||||||||||||||||||    
T  13144073 tctctctctttcatttt-tccataaccaataactaatgaaaattgtttttacatcttcctataaaactttt 13144004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 140
Target Start/End: Complemental strand, 2628297 - 2628249
Alignment:
Q  92 aattttctctctctttcattttctccataaccaatagccaataaaaatt 140  Q
    ||||| ||||||||||||||||||| |||| ||||| ||||| ||||||    
T  2628297 aatttgctctctctttcattttctcaataagcaataaccaatgaaaatt 2628249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 141
Target Start/End: Original strand, 5217428 - 5217468
Alignment:
Q  101 tctctttcattttctccataaccaatagccaataaaaattg 141  Q
    |||||||||||||||| ||||| |||| |||||||||||||    
T  5217428 tctctttcattttctctataactaataaccaataaaaattg 5217468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 121
Target Start/End: Original strand, 8673385 - 8673437
Alignment:
Q  69 aaaaataaatgcaaattacatttaattttctctctctttcattttctccataa 121  Q
    |||| |||||||||| |||||| ||||| |||||| |||||||||||| ||||    
T  8673385 aaaattaaatgcaaagtacattcaatttgctctctttttcattttctctataa 8673437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 83; Significance: 2e-39; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 7 - 141
Target Start/End: Complemental strand, 7275092 - 7274958
Alignment:
Q  7 tatttaatcttgtttttaaaacaaaatcatcttttccnnnnnnnncttttgtttattctcataaaaataaatgcaaattacatttaattttctctctctt 106  Q
    ||||||||||||||||||||| |||||||||||||||        |||||| |||||||||| ||| ||||| |||||||||||||||||||||||||||    
T  7275092 tatttaatcttgtttttaaaaaaaaatcatcttttccaataaaaacttttgcttattctcatgaaattaaatacaaattacatttaattttctctctctt 7274993  T
Q  107 tcattttctccataaccaatagccaataaaaattg 141  Q
    ||||||| ||||||||||||||||||| |||||||    
T  7274992 tcattttttccataaccaatagccaatgaaaattg 7274958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 59 - 167
Target Start/End: Complemental strand, 11082410 - 11082302
Alignment:
Q  59 ttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaattgnnnnnnnatcttcctat 158  Q
    |||||||||||||| ||||||||||||||||| |||||||||| ||||||||||| ||||||||||||||||||| |||||||       |||| |||||    
T  11082410 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatctccctat 11082311  T
Q  159 aaaactttt 167  Q
    |||||||||    
T  11082310 aaaactttt 11082302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 59 - 167
Target Start/End: Original strand, 21542414 - 21542522
Alignment:
Q  59 ttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaattgnnnnnnnatcttcctat 158  Q
    |||||||||||| | ||||||||||||||||| |||||||| | ||||||||||| |||||||||||||||||||||||||||       ||||||||||    
T  21542414 ttattctcataatattaaatgcaaattacattcaattttctttttctttcattttttccataaccaatagccaataaaaattgtttttacatcttcctat 21542513  T
Q  159 aaaactttt 167  Q
    |||||||||    
T  21542514 aaaactttt 21542522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 59 - 167
Target Start/End: Complemental strand, 3095884 - 3095776
Alignment:
Q  59 ttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaattgnnnnnnnatcttcctat 158  Q
    |||||||||||||| ||||||||||||||||| |||||||||| | ||||||||| ||||||| ||||||||||| |||||||       ||||||||||    
T  3095884 ttattctcataaaattaaatgcaaattacattcaattttctctttatttcattttttccataatcaatagccaatgaaaattgtttttacatcttcctat 3095785  T
Q  159 aaaactttt 167  Q
    |||||||||    
T  3095784 aaaactttt 3095776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 59 - 141
Target Start/End: Complemental strand, 34177806 - 34177724
Alignment:
Q  59 ttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaattg 141  Q
    |||||||||||||| ||||||||||||||||| |||| ||||| ||||||||||| ||||||||||||||||||| |||||||    
T  34177806 ttattctcataaaattaaatgcaaattacattcaattatctctttctttcattttttccataaccaatagccaatgaaaattg 34177724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 52 - 141
Target Start/End: Complemental strand, 12461601 - 12461512
Alignment:
Q  52 cttttgtttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaattg 141  Q
    ||||||||||||||||| ||| ||||| ||||||||||| |||||||| ||||||  ||||||||||||||||||||||||| |||||||    
T  12461601 cttttgtttattctcatgaaattaaatccaaattacattcaattttctgtctcttctattttctccataaccaatagccaatgaaaattg 12461512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 53 - 133
Target Start/End: Original strand, 9428760 - 9428840
Alignment:
Q  53 ttttgtttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaat 133  Q
    |||||||||||||||||||| | ||||||||||| |||||||||||||||||||| ||||| || ||||||||||||||||    
T  9428760 ttttgtttattctcataaaatttaatgcaaattatatttaattttctctctcttttattttttctataaccaatagccaat 9428840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 53 - 165
Target Start/End: Complemental strand, 30794363 - 30794251
Alignment:
Q  53 ttttgtttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaattgnnnnnnnatct 152  Q
    |||| ||||||||||| ||| ||||||||||||| |||||||||||||||||||  ||||||||||| ||||||||||||| |||| ||       ||||    
T  30794363 ttttttttattctcatgaaattaaatgcaaattagatttaattttctctctcttctattttctccatcaccaatagccaatgaaaaatgtttttacatct 30794264  T
Q  153 tcctataaaactt 165  Q
    |||||||||||||    
T  30794263 tcctataaaactt 30794251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 59 - 141
Target Start/End: Complemental strand, 35129220 - 35129138
Alignment:
Q  59 ttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaattg 141  Q
    |||||||| ||||| ||||||||||||||||| |||||||||| ||||||||||| ||||||||||||| ||||| |||||||    
T  35129220 ttattctcgtaaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaataaccaatgaaaattg 35129138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 52 - 133
Target Start/End: Complemental strand, 17751916 - 17751835
Alignment:
Q  52 cttttgtttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaat 133  Q
    |||||||||||||| || ||| ||||||||||||||||| |||||| |||||||| |||||||||||||| |||||||||||    
T  17751916 cttttgtttattcttatgaaactaaatgcaaattacattcaattttttctctcttccattttctccataatcaatagccaat 17751835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 53 - 139
Target Start/End: Original strand, 31107181 - 31107266
Alignment:
Q  53 ttttgtttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaat 139  Q
    ||||||||||||| |||||| ||||||||||||||||| || ||||| ||||||||||||| || |||| |||||| ||||||||||    
T  31107181 ttttgtttattcttataaaattaaatgcaaattacattcaa-tttctttctctttcattttttctataatcaatagtcaataaaaat 31107266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 82; Significance: 8e-39; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 53 - 167
Target Start/End: Original strand, 45660355 - 45660469
Alignment:
Q  53 ttttgtttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaattgnnnnnnnatct 152  Q
    |||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||       ||||    
T  45660355 ttttgtttattctcataaaattaaatgcaaattacatttaattttatctctctttcattttctccataaccaatagccaatgaaaattgtttttacatct 45660454  T
Q  153 tcctataaaactttt 167  Q
    |||||||||||||||    
T  45660455 tcctataaaactttt 45660469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 53 - 165
Target Start/End: Complemental strand, 33198801 - 33198689
Alignment:
Q  53 ttttgtttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaattgnnnnnnnatct 152  Q
    ||||||||||||||||| || ||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||| |||||||       ||||    
T  33198801 ttttgtttattctcatagaattaaatgcaaattacattcaattttctctctctttcattttctccataaccaataaccaatcaaaattgtttttacatct 33198702  T
Q  153 tcctataaaactt 165  Q
    |||||||||||||    
T  33198701 tcctataaaactt 33198689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 53 - 167
Target Start/End: Original strand, 45085247 - 45085361
Alignment:
Q  53 ttttgtttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaattgnnnnnnnatct 152  Q
    |||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||| |||||||||||| || ||| |||||||       ||||    
T  45085247 ttttgtttattctcataaaattaaatgcaaattacattcaattttctctctctttcattttttccataaccaatggctaatgaaaattgtttttacatct 45085346  T
Q  153 tcctataaaactttt 167  Q
    |||||||||||||||    
T  45085347 tcctataaaactttt 45085361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 53 - 167
Target Start/End: Complemental strand, 6110371 - 6110255
Alignment:
Q  53 ttttgtttattctcataaaaataaatgcaaattacatttaattttctct--ctctttcattttctccataaccaatagccaataaaaattgnnnnnnnat 150  Q
    |||||||||||||||||||| ||||||||||||||||| ||||||||||  |||||||||||| ||||||||||||||||||| |||||||       ||    
T  6110371 ttttgtttattctcataaaattaaatgcaaattacattcaattttctctctctctttcattttttccataaccaatagccaatgaaaattgtttttacat 6110272  T
Q  151 cttcctataaaactttt 167  Q
    |||||||||||||||||    
T  6110271 cttcctataaaactttt 6110255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 53 - 141
Target Start/End: Original strand, 41528246 - 41528334
Alignment:
Q  53 ttttgtttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaattg 141  Q
    |||||||||||||||||||| ||||||||||||||||| |||||||||| ||||||||||| ||||||||||||||||||| |||||||    
T  41528246 ttttgtttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattg 41528334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 52 - 167
Target Start/End: Original strand, 19264088 - 19264204
Alignment:
Q  52 cttttgtttattctcataaaaataaatgcaaa-ttacatttaattttctctctctttcattttctccataaccaatagccaataaaaattgnnnnnnnat 150  Q
    ||||||||||||||||||||| |||||||||| ||||||| |||||||||||||||| ||||| ||||||||||||||||||| |||||||       ||    
T  19264088 cttttgtttattctcataaaattaaatgcaaaattacattcaattttctctctctttaattttttccataaccaatagccaatgaaaattgtttttacat 19264187  T
Q  151 cttcctataaaactttt 167  Q
    |||||||||||||||||    
T  19264188 cttcctataaaactttt 19264204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 53 - 167
Target Start/End: Original strand, 14873952 - 14874067
Alignment:
Q  53 ttttgtttattctcataaaaataaa-tgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaattgnnnnnnnatc 151  Q
    ||||||||||||||||| || |||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||        |||    
T  14873952 ttttgtttattctcatataattaaaatgcaaattacatttaattttatctctctttcattttctccataaccaatagccaatgaaaattatttttacatc 14874051  T
Q  152 ttcctataaaactttt 167  Q
    ||||||||||||||||    
T  14874052 ttcctataaaactttt 14874067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 7 - 141
Target Start/End: Original strand, 25571990 - 25572123
Alignment:
Q  7 tatttaatcttgtttttaaaacaaaatcatcttttccnnnnnnnncttttgtttattctcataaaaataaatgcaaattacatttaattttctctctctt 106  Q
    ||||||||||||||||| ||| |||||||||||||||         ||||| |||||||||| ||| |||||||||||||||||||||||||||||||||    
T  25571990 tatttaatcttgttttttaaaaaaaatcatcttttccaataattttttttgcttattctcatgaaattaaatgcaaattacatttaattttctctctctt 25572089  T
Q  107 tcattttctccataaccaatagccaataaaaattg 141  Q
     |||||| ||||||||||||| ||||| |||||||    
T  25572090 ccatttt-tccataaccaatatccaatgaaaattg 25572123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 53 - 167
Target Start/End: Original strand, 3201316 - 3201430
Alignment:
Q  53 ttttgtttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaattgnnnnnnnatct 152  Q
    |||||||||||||||||||| ||||||||||||||||| |||||| ||| ||||||||||| ||||||||||||||||||| |||||||       ||||    
T  3201316 ttttgtttattctcataaaattaaatgcaaattacattcaattttatctttctttcattttttccataaccaatagccaatgaaaattgtttttacatct 3201415  T
Q  153 tcctataaaactttt 167  Q
    | |||||||||||||    
T  3201416 ttctataaaactttt 3201430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 52 - 140
Target Start/End: Original strand, 28858298 - 28858386
Alignment:
Q  52 cttttgtttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaatt 140  Q
    ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||  | |||||||||||||||| ||||||    
T  28858298 cttttgtttattctcataaaattaaatgcaaattacattcaattttctctctctttcatttttacaataaccaatagccaatgaaaatt 28858386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 53 - 140
Target Start/End: Complemental strand, 28599318 - 28599231
Alignment:
Q  53 ttttgtttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaatt 140  Q
    |||||||||||||||||||| |||||||| |||||||| |||||||||| ||||||||||| ||||||||||||||||||| ||||||    
T  28599318 ttttgtttattctcataaaattaaatgcatattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaatt 28599231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 7 - 141
Target Start/End: Original strand, 8701547 - 8701680
Alignment:
Q  7 tatttaatcttgtttttaaaacaaaatcatcttttccnnnnnnnncttttgtttattctcataaaaataaatgcaaattacatttaattttctctctctt 106  Q
    ||||||||||||||||| ||| |||||||||||||||        |||||| || ||||||| ||| ||||| |||||| ||||||||||||||||||||    
T  8701547 tatttaatcttgttttttaaa-aaaatcatcttttccaataaaaacttttgcttgttctcatgaaattaaatacaaatttcatttaattttctctctctt 8701645  T
Q  107 tcattttctccataaccaatagccaataaaaattg 141  Q
     |||||| ||||||||||||||||||| |||||||    
T  8701646 ccattttttccataaccaatagccaatgaaaattg 8701680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 59 - 140
Target Start/End: Original strand, 35517119 - 35517200
Alignment:
Q  59 ttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaatt 140  Q
    |||||||||||||| ||||||||||||||||| |||||||||| ||||||||||| ||||||||||||||||||| ||||||    
T  35517119 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaatt 35517200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 7 - 141
Target Start/End: Complemental strand, 29524255 - 29524123
Alignment:
Q  7 tatttaatcttgtttttaaaacaaaatcatcttttccnnnnnnnncttttgtttattctcataaaaataaatgcaaattacatttaattttctctctctt 106  Q
    |||||||| ||||||||||||  ||||||| ||||||        |||||  |||||||||| ||| |||||||||||||||||||||||||||||||||    
T  29524255 tatttaatattgtttttaaaa--aaatcatattttccaataaaaactttttcttattctcatgaaattaaatgcaaattacatttaattttctctctctt 29524158  T
Q  107 tcattttctccataaccaatagccaataaaaattg 141  Q
    | ||||| |||||||||||| |||||| |||||||    
T  29524157 ttattttttccataaccaattgccaatgaaaattg 29524123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 52 - 140
Target Start/End: Original strand, 5963190 - 5963278
Alignment:
Q  52 cttttgtttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaatt 140  Q
    ||||| |||||||| || | | ||||||||||||||||| ||||||||||||||| |||||||| ||||||||||||||||||||||||    
T  5963190 cttttctttattcttatgacattaaatgcaaattacattcaattttctctctcttccattttcttcataaccaatagccaataaaaatt 5963278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 52 - 141
Target Start/End: Complemental strand, 6766105 - 6766015
Alignment:
Q  52 cttttgtttattctcataaaaataaatgcaaattacatttaattttctctctctttca-ttttctccataaccaatagccaataaaaattg 141  Q
    ||||||||||||||||| ||| |||||| |||||||||| ||||||||||||||| || |||| |||||||||||||| ||||||||||||    
T  6766105 cttttgtttattctcattaaattaaatgtaaattacattcaattttctctctcttccatttttttccataaccaatagtcaataaaaattg 6766015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 52 - 141
Target Start/End: Original strand, 12938231 - 12938320
Alignment:
Q  52 cttttgtttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaattg 141  Q
    ||||||||||||||||| ||| ||||||||||||||||| |  ||| ||||||||| ||||||||||||| ||||||||||| |||||||    
T  12938231 cttttgtttattctcatgaaattaaatgcaaattacattcatatttatctctcttttattttctccataatcaatagccaatgaaaattg 12938320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 52 - 141
Target Start/End: Complemental strand, 40584569 - 40584480
Alignment:
Q  52 cttttgtttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaattg 141  Q
    |||||||||||| |||| ||| ||||||||||||||||| ||||||||||||||||||||||  |||||||||| | ||||| |||||||    
T  40584569 cttttgtttattttcatgaaattaaatgcaaattacattcaattttctctctctttcatttttcccataaccaacaaccaatgaaaattg 40584480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 52 - 165
Target Start/End: Original strand, 33677472 - 33677585
Alignment:
Q  52 cttttgtttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaattgnnnnnnnatc 151  Q
    ||||||||||||||||| ||| ||||||| ||| ||||| |||||||| ||||||  |||||||||||||||||||| |||| |||||||       |||    
T  33677472 cttttgtttattctcatgaaattaaatgctaataacattcaattttctttctcttcaattttctccataaccaatagtcaatgaaaattgtttttacatc 33677571  T
Q  152 ttcctataaaactt 165  Q
    ||||||||||||||    
T  33677572 ttcctataaaactt 33677585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 52 - 167
Target Start/End: Original strand, 11617013 - 11617128
Alignment:
Q  52 cttttgtttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaattgnnnnnnnatc 151  Q
    |||||| ||||| ||||||||  ||||||||||| |||| |||||||||||||||| |||||  | |||||||||||||||| |||||||       |||    
T  11617013 cttttgcttattttcataaaataaaatgcaaatttcattcaattttctctctcttttatttttactataaccaatagccaatgaaaattgtttttacatc 11617112  T
Q  152 ttcctataaaactttt 167  Q
    ||||||||||||||||    
T  11617113 ttcctataaaactttt 11617128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 57 - 141
Target Start/End: Complemental strand, 24204695 - 24204611
Alignment:
Q  57 gtttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaattg 141  Q
    |||||||||||| | | |||||| |||||| ||| ||||||||||||||| |||||||| ||||||||||||||||| |||||||    
T  24204695 gtttattctcatgatattaaatgtaaattatattcaattttctctctcttccattttcttcataaccaatagccaatgaaaattg 24204611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 54 - 141
Target Start/End: Complemental strand, 39696968 - 39696881
Alignment:
Q  54 tttgtttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaattg 141  Q
    ||||||||||||||  ||| |||||||||||||||||||||||||||| |||| ||||||||| || | ||||||| ||| |||||||    
T  39696968 tttgtttattctcacgaaattaaatgcaaattacatttaattttctctttcttccattttctctatgatcaatagctaatgaaaattg 39696881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 53 - 113
Target Start/End: Complemental strand, 30421352 - 30421292
Alignment:
Q  53 ttttgtttattctcataaaaataaatgcaaattacatttaattttctctctctttcatttt 113  Q
    ||||||||||||| |||||| |||||| ||||||||||||||||||||| |||||||||||    
T  30421352 ttttgtttattcttataaaattaaatgtaaattacatttaattttctctttctttcatttt 30421292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 53 - 133
Target Start/End: Complemental strand, 30830766 - 30830686
Alignment:
Q  53 ttttgtttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaat 133  Q
    ||||| |||||||||| ||| ||||||||||||||||  |||||||||||| |||||||||||| |||| ||||| |||||    
T  30830766 ttttgattattctcatgaaattaaatgcaaattacatacaattttctctctttttcattttctcaataatcaataaccaat 30830686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 59 - 133
Target Start/End: Original strand, 44454987 - 44455061
Alignment:
Q  59 ttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaat 133  Q
    |||||||||| ||| ||||||||||||||||| ||||||  ||||||| ||||||||| |||| |||||||||||    
T  44454987 ttattctcatgaaattaaatgcaaattacattcaatttttcctctcttccattttctctataatcaatagccaat 44455061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 53 - 141
Target Start/End: Complemental strand, 7645400 - 7645309
Alignment:
Q  53 ttttgtttattctcataaaaataaatgcaaattacatttaattttctctctcttt---cattttctccataaccaatagccaataaaaattg 141  Q
    |||||||||||||||| ||| ||||||||||||||||| |||||||||| |  ||   ||||||||||||||  |||||||||| |||||||    
T  7645400 ttttgtttattctcatgaaattaaatgcaaattacattcaattttctctataattaaccattttctccataattaatagccaatgaaaattg 7645309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 54 - 141
Target Start/End: Complemental strand, 9864886 - 9864801
Alignment:
Q  54 tttgtttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaattg 141  Q
    |||| |||||||||| ||| ||||||||||||||||| |||||  | |||||| |||||||||||||| |||| |||||| |||||||    
T  9864886 tttgcttattctcatgaaattaaatgcaaattacattcaattt--tatctcttccattttctccataatcaattgccaatgaaaattg 9864801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 92 - 138
Target Start/End: Complemental strand, 5280638 - 5280592
Alignment:
Q  92 aattttctctctctttcattttctccataaccaatagccaataaaaa 138  Q
    |||||||||||||||||||||| ||||||||||||||||||| ||||    
T  5280638 aattttctctctctttcattttttccataaccaatagccaatgaaaa 5280592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 69 - 165
Target Start/End: Original strand, 9709519 - 9709615
Alignment:
Q  69 aaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaattgnnnnnnnatcttcctataaaactt 165  Q
    |||||| |||||||||| |||| |||||  |||||||||||||||||| |||| ||||| | ||| |||||||       |||||||||||||||||    
T  9709519 aaaaattaatgcaaattgcattcaatttgttctctctttcattttctcaataatcaataacaaatgaaaattgttttcacatcttcctataaaactt 9709615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 69 - 127
Target Start/End: Complemental strand, 11031077 - 11031019
Alignment:
Q  69 aaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaata 127  Q
    |||| |||||||||| | |||| ||||| ||||||||||||||||||| ||||||||||    
T  11031077 aaaattaaatgcaaagtgcattcaatttgctctctctttcattttctcaataaccaata 11031019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 84 - 141
Target Start/End: Complemental strand, 35115943 - 35115886
Alignment:
Q  84 ttacatttaattttctctctctttcattttctccataaccaatagccaataaaaattg 141  Q
    ||||||| ||||||| ||||||| |||||||||||||||||||| | ||| |||||||    
T  35115943 ttacattcaattttcactctcttccattttctccataaccaataacaaatgaaaattg 35115886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 52 - 127
Target Start/End: Original strand, 35022886 - 35022961
Alignment:
Q  52 cttttgtttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaata 127  Q
    |||||||||  |||||| ||| ||||||||||||  ||| ||||||||||||||  |||||||||| ||| |||||    
T  35022886 cttttgttttatctcattaaattaaatgcaaattgtattcaattttctctctctaccattttctccttaaacaata 35022961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 165
Target Start/End: Complemental strand, 8032823 - 8032726
Alignment:
Q  69 aaaaataaatgcaaattacatttaattttctctctc-tttcattttctccataaccaatagccaataaaaattgnnnnnnnatcttcctataaaactt 165  Q
    |||| |||||||||| | |||| ||||| ||||||| |||||||||||| ||||| |  | |||||||||||||       |||||||||||||||||    
T  8032823 aaaattaaatgcaaaatgcattcaatttgctctctcctttcattttctcaataactagcaaccaataaaaattgtttttacatcttcctataaaactt 8032726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 121
Target Start/End: Original strand, 32010108 - 32010160
Alignment:
Q  69 aaaaataaatgcaaattacatttaattttctctctctttcattttctccataa 121  Q
    |||| |||||||||| | |||||||||| |||||| |||||||||||| ||||    
T  32010108 aaaattaaatgcaaagtgcatttaatttgctctctttttcattttctctataa 32010160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 78; Significance: 2e-36; HSPs: 30)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 53 - 167
Target Start/End: Original strand, 6191035 - 6191149
Alignment:
Q  53 ttttgtttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaattgnnnnnnnatct 152  Q
    |||||||||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||       ||||    
T  6191035 ttttgtttattctcataaaattaaatgaaaattacatttaattttatctctctttcattttctccataaccaatagccaatgaaaattgtttttacatct 6191134  T
Q  153 tcctataaaactttt 167  Q
    |||||||||||||||    
T  6191135 tcctataaaactttt 6191149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 52 - 167
Target Start/End: Original strand, 25944565 - 25944680
Alignment:
Q  52 cttttgtttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaattgnnnnnnnatc 151  Q
    ||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| ||||| |||||||||||| |||||| |||||||       |||    
T  25944565 cttttgtttattctcataaaattaaatgcaaattacattcaattttctctctcttttattttttccataaccaatggccaatgaaaattgtttttacatc 25944664  T
Q  152 ttcctataaaactttt 167  Q
    ||||||||||||||||    
T  25944665 ttcctataaaactttt 25944680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 53 - 167
Target Start/End: Original strand, 18102520 - 18102634
Alignment:
Q  53 ttttgtttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaattgnnnnnnnatct 152  Q
    |||||||||||||||||||| ||||||||||||||||| ||||||| |||||||||||||| |||||||||||| |||||| |||||||       ||||    
T  18102520 ttttgtttattctcataaaattaaatgcaaattacattcaattttcactctctttcattttttccataaccaatggccaatgaaaattgtttttacatct 18102619  T
Q  153 tcctataaaactttt 167  Q
    |||||||||||||||    
T  18102620 tcctataaaactttt 18102634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 59 - 167
Target Start/End: Original strand, 14805866 - 14805974
Alignment:
Q  59 ttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaattgnnnnnnnatcttcctat 158  Q
    |||||||||||||| ||||||||||||||||| |||||||||| ||||||||||| ||||||||||||||||||| |||||||       ||||||||||    
T  14805866 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 14805965  T
Q  159 aaaactttt 167  Q
    |||||||||    
T  14805966 aaaactttt 14805974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 59 - 167
Target Start/End: Original strand, 15252860 - 15252968
Alignment:
Q  59 ttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaattgnnnnnnnatcttcctat 158  Q
    |||||||||||||| ||||||||||||||||| |||||||||| ||||||||||| ||||||||||||||||||| |||||||       ||||||||||    
T  15252860 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 15252959  T
Q  159 aaaactttt 167  Q
    |||||||||    
T  15252960 aaaactttt 15252968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 59 - 167
Target Start/End: Complemental strand, 25737791 - 25737683
Alignment:
Q  59 ttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaattgnnnnnnnatcttcctat 158  Q
    |||||||||||||| ||||||||||||||||| |||||||||| ||||||||||| ||||||||||||||||||| |||||||       ||||||||||    
T  25737791 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 25737692  T
Q  159 aaaactttt 167  Q
    |||||||||    
T  25737691 aaaactttt 25737683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 52 - 167
Target Start/End: Complemental strand, 20123851 - 20123736
Alignment:
Q  52 cttttgtttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaattgnnnnnnnatc 151  Q
    ||||||||||||||||||||| ||||||||||||||||| |||||||| ||||||||||||| ||||||| ||||||||||| |||||||       |||    
T  20123851 cttttgtttattctcataaaattaaatgcaaattacattcaattttctttctctttcattttttccataagcaatagccaatgaaaattgtttttacatc 20123752  T
Q  152 ttcctataaaactttt 167  Q
    || |||||||||||||    
T  20123751 ttgctataaaactttt 20123736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 7 - 141
Target Start/End: Original strand, 22632033 - 22632167
Alignment:
Q  7 tatttaatcttgtttttaaaacaaaatcatcttttccnnnnnnnncttttgtttattctcataaaaataaatgcaaattacatttaattttctctctctt 106  Q
    ||||||||||| ||||||||| || ||||||||||||         ||||| |||||||||| ||| |||||||||||||||||||||||||||||||||    
T  22632033 tatttaatcttatttttaaaaaaatatcatcttttccaataattttttttgcttattctcatgaaattaaatgcaaattacatttaattttctctctctt 22632132  T
Q  107 tcattttctccataaccaatagccaataaaaattg 141  Q
     |||||| ||||||||||||| ||||| |||||||    
T  22632133 ccattttttccataaccaatatccaatgaaaattg 22632167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 59 - 167
Target Start/End: Original strand, 35923248 - 35923356
Alignment:
Q  59 ttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaattgnnnnnnnatcttcctat 158  Q
    |||||||||||||| ||||||||||||||||| |||||||||| ||||||||||| ||||||||||||||||||| |||||||       ||||| ||||    
T  35923248 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatctttctat 35923347  T
Q  159 aaaactttt 167  Q
    |||||||||    
T  35923348 aaaactttt 35923356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 59 - 167
Target Start/End: Original strand, 45485951 - 45486059
Alignment:
Q  59 ttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaattgnnnnnnnatcttcctat 158  Q
    |||||||||||||| ||||||||||||||||| |||||||||| ||||||||||| ||||||||||||||||||| ||||||        ||||||||||    
T  45485951 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattatttttacatcttcctat 45486050  T
Q  159 aaaactttt 167  Q
    |||||||||    
T  45486051 aaaactttt 45486059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 59 - 167
Target Start/End: Complemental strand, 46760421 - 46760313
Alignment:
Q  59 ttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaattgnnnnnnnatcttcctat 158  Q
    |||||||||||||| ||||||||||||||||| ||| |||||| ||||||||||| ||||||||||||||||||| |||||||       ||||||||||    
T  46760421 ttattctcataaaattaaatgcaaattacattcaatattctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 46760322  T
Q  159 aaaactttt 167  Q
    |||||||||    
T  46760321 aaaactttt 46760313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 53 - 167
Target Start/End: Complemental strand, 4910803 - 4910689
Alignment:
Q  53 ttttgtttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaattgnnnnnnnatct 152  Q
    |||||||||| ||||||||| ||||||||||||||||| |||||| ||||||||||||||| ||||||| ||||||||||| ||||||        ||||    
T  4910803 ttttgtttatgctcataaaattaaatgcaaattacattcaattttatctctctttcattttttccataatcaatagccaatgaaaattatttttacatct 4910704  T
Q  153 tcctataaaactttt 167  Q
    |||||||||||||||    
T  4910703 tcctataaaactttt 4910689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 53 - 141
Target Start/End: Complemental strand, 47557771 - 47557683
Alignment:
Q  53 ttttgtttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaattg 141  Q
    ||||||||||||||||| || |||||||||||||||||||||||||| ||||||||||||| |||||||  |||||||||| |||||||    
T  47557771 ttttgtttattctcatagaattaaatgcaaattacatttaattttctttctctttcattttttccataattaatagccaatgaaaattg 47557683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 59 - 141
Target Start/End: Complemental strand, 19912933 - 19912851
Alignment:
Q  59 ttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaattg 141  Q
    |||||||||| ||| ||||||||||||||||| |||||||||| ||||||||||| ||||||||||||| ||||| |||||||    
T  19912933 ttattctcatgaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaataaccaatgaaaattg 19912851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 7 - 167
Target Start/End: Original strand, 9158036 - 9158193
Alignment:
Q  7 tatttaatcttgtttttaaaacaaaatcatcttttccnnnnnnnncttttgtttattctcataaaaataaatgcaaattacatttaattttctctctctt 106  Q
    ||||||||||||||||||||| |||||| ||||||||        |||||||||||||| |||||| ||||||||||||||||| || ||| | ||||||    
T  9158036 tatttaatcttgtttttaaaa-aaaatc-tcttttccaagaaaaacttttgtttattcttataaaattaaatgcaaattacattcaaatttttttctctt 9158133  T
Q  107 tcattttctccataaccaatagccaataaaaattgnnnnnnnatcttcctataaaactttt 167  Q
    ||||||| | |||||||||| |||||  |||||||       |||||||||||||||||||    
T  9158134 tcatttt-ttcataaccaatggccaaagaaaattgtttttacatcttcctataaaactttt 9158193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 59 - 141
Target Start/End: Original strand, 47779600 - 47779682
Alignment:
Q  59 ttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaattg 141  Q
    |||||||||| ||| |||||||||||||||||||||||||||| ||||| ||||| |||||||||| | |||||| |||||||    
T  47779600 ttattctcatgaaattaaatgcaaattacatttaattttctctttcttttattttttccataaccagttgccaatgaaaattg 47779682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 52 - 132
Target Start/End: Complemental strand, 2610739 - 2610659
Alignment:
Q  52 cttttgtttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaa 132  Q
    ||||||||||||||||| ||| ||| ||||||||||||| ||||||   |||||| |||||||||||||||||||||||||    
T  2610739 cttttgtttattctcatgaaattaagtgcaaattacattcaatttttcttctcttccattttctccataaccaatagccaa 2610659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 52 - 121
Target Start/End: Original strand, 11780007 - 11780076
Alignment:
Q  52 cttttgtttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataa 121  Q
    ||||||||||||||||||||| ||||||||||||||||  |||||||||| |||| |||||||| |||||    
T  11780007 cttttgtttattctcataaaattaaatgcaaattacatcaaattttctctttcttccattttcttcataa 11780076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 52 - 133
Target Start/End: Original strand, 14574553 - 14574634
Alignment:
Q  52 cttttgtttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaat 133  Q
    |||||| |||||||||||||| ||||||||||||| | | ||||||| ||||||| |||||||| |||||||||||| ||||    
T  14574553 cttttgcttattctcataaaattaaatgcaaattaaaatcaattttcactctcttccattttcttcataaccaatagacaat 14574634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 52 - 133
Target Start/End: Original strand, 15995708 - 15995789
Alignment:
Q  52 cttttgtttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaat 133  Q
    |||||| |||||||||||||| ||||||||||||| | | ||||||| ||||||| |||||||| ||||||||||| |||||    
T  15995708 cttttgcttattctcataaaattaaatgcaaattaaaatcaattttcactctcttccattttcttcataaccaataaccaat 15995789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 53 - 141
Target Start/End: Original strand, 44682868 - 44682955
Alignment:
Q  53 ttttgtttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaattg 141  Q
    |||||||||||||||| ||| ||| ||||||||||||  |||||||| | ||||||| |||||||||||||||||| |||| |||||||    
T  44682868 ttttgtttattctcatgaaattaattgcaaattacatccaattttctatatctttca-tttctccataaccaatagtcaatgaaaattg 44682955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 60 - 141
Target Start/End: Complemental strand, 27810898 - 27810817
Alignment:
Q  60 tattctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaattg 141  Q
    ||||||||| ||| ||||||||||||||||| |||||||  |||||| ||||||||  |||| ||||| |||||||||||||    
T  27810898 tattctcatgaaattaaatgcaaattacattcaattttccatctcttccattttctatataatcaataaccaataaaaattg 27810817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 53 - 100
Target Start/End: Complemental strand, 12633157 - 12633110
Alignment:
Q  53 ttttgtttattctcataaaaataaatgcaaattacatttaattttctc 100  Q
    |||||||||||||||||||| ||||||||||||||||| |||||||||    
T  12633157 ttttgtttattctcataaaattaaatgcaaattacattcaattttctc 12633110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 69 - 140
Target Start/End: Original strand, 38260322 - 38260393
Alignment:
Q  69 aaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaatt 140  Q
    |||| |||||||||| | |||||||||| ||||||||||||||||||| ||||  |||| ||||| ||||||    
T  38260322 aaaattaaatgcaaagtgcatttaatttgctctctctttcattttctcaataataaataaccaatgaaaatt 38260393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 59 - 141
Target Start/End: Complemental strand, 19492559 - 19492477
Alignment:
Q  59 ttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaattg 141  Q
    |||||| ||| ||| ||||| ||||||| ||| |||||||| ||||||  ||||||||||||||||| || | ||||||||||    
T  19492559 ttattcgcatgaaattaaatacaaattatattcaattttctttctcttctattttctccataaccaacagtcgataaaaattg 19492477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 59 - 140
Target Start/End: Complemental strand, 4237879 - 4237798
Alignment:
Q  59 ttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaatt 140  Q
    ||||||| |||||| ||||||||||||| ||| |||| | | |||||| |||||||| | ||| ||||||||||| ||||||    
T  4237879 ttattctaataaaattaaatgcaaattatattcaattatatttctcttccattttcttcctaatcaatagccaattaaaatt 4237798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 54 - 103
Target Start/End: Complemental strand, 35069004 - 35068955
Alignment:
Q  54 tttgtttattctcataaaaataaatgcaaattacatttaattttctctct 103  Q
    ||||||||||||||||| | ||||||||||||||||| |||||| |||||    
T  35069004 tttgtttattctcataatattaaatgcaaattacattcaattttttctct 35068955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 68 - 121
Target Start/End: Complemental strand, 21654235 - 21654182
Alignment:
Q  68 taaaaataaatgcaaattacatttaattttctctctctttcattttctccataa 121  Q
    ||||| ||||||||||||||||| |||||  ||||  |||||||||||||||||    
T  21654235 taaaattaaatgcaaattacattcaatttgttctccttttcattttctccataa 21654182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 68 - 141
Target Start/End: Complemental strand, 35084215 - 35084142
Alignment:
Q  68 taaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaattg 141  Q
    ||||| |||||||||||| |||| |||||  ||||  ||||||||||||||||| || || ||||||| |||||    
T  35084215 taaaattaaatgcaaattgcattgaatttgttctccttttcattttctccataatcattatccaataagaattg 35084142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 65 - 141
Target Start/End: Original strand, 48413723 - 48413796
Alignment:
Q  65 tcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaattg 141  Q
    |||| ||| ||||||||||||| ||| ||||||||||||  |  |||||||||||||||||||| |||| |||||||    
T  48413723 tcatgaaattaaatgcaaatta-attcaattttctctcttct--attttctccataaccaatagtcaatgaaaattg 48413796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 76; Significance: 3e-35; HSPs: 62)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 7 - 167
Target Start/End: Original strand, 6785402 - 6785560
Alignment:
Q  7 tatttaatcttgtttttaaaacaaaatcatcttttccnnnnnnnncttttgtttattctcataaaaataaatgcaaattacatttaattttctctctctt 106  Q
    ||||||||||||||||||||| |||||| ||||||||        ||||||||||||||||||||| |||||||||| |||||| |||||||||||||||    
T  6785402 tatttaatcttgtttttaaaa-aaaatc-tcttttccaagaaaaacttttgtttattctcataaaattaaatgcaaactacattcaattttctctctctt 6785499  T
Q  107 tcattttctccataaccaatagccaataaaaattgnnnnnnnatcttcctataaaactttt 167  Q
    ||||||| ||||||||||||||||||| |||||||       |||||| ||||||||||||    
T  6785500 tcattttttccataaccaatagccaatgaaaattgtttttacatcttcatataaaactttt 6785560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 7 - 141
Target Start/End: Original strand, 16854084 - 16854218
Alignment:
Q  7 tatttaatcttgtttttaaaacaaaa-tcatcttttccnnnnnnnncttttgtttattctcataaaaataaatgcaaattacatttaattttctctctct 105  Q
    |||||||||||| |||||||| |||| |||||||||||         |||||||| ||||||||||| |||||||||||||||||||||||| |||||||    
T  16854084 tatttaatcttggttttaaaaaaaaaatcatcttttccaataattgtttttgttt-ttctcataaaattaaatgcaaattacatttaattttatctctct 16854182  T
Q  106 ttcattttctccataaccaatagccaataaaaattg 141  Q
    ||||||||||||||||||||||||||||||||||||    
T  16854183 ttcattttctccataaccaatagccaataaaaattg 16854218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 52 - 167
Target Start/End: Complemental strand, 15959812 - 15959697
Alignment:
Q  52 cttttgtttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaattgnnnnnnnatc 151  Q
    ||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| ||||| ||||||||||||||||||| |||||||       |||    
T  15959812 cttttgtttattctcataaaattaaatgcaaattacattcaattttctctctctttaattttttccataaccaatagccaatgaaaattgtttttacatc 15959713  T
Q  152 ttcctataaaactttt 167  Q
    ||||||||||||||||    
T  15959712 ttcctataaaactttt 15959697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 53 - 167
Target Start/End: Complemental strand, 32624176 - 32624062
Alignment:
Q  53 ttttgtttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaattgnnnnnnnatct 152  Q
    |||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||| |||||||||||| |||||| |||||||       ||||    
T  32624176 ttttgtttattctcataaaattaaatgcaaattacattcaattttctctctctttcattttttccataaccaatggccaatgaaaattgtttttacatct 32624077  T
Q  153 tcctataaaactttt 167  Q
    |||||||||||||||    
T  32624076 tcctataaaactttt 32624062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 8 - 167
Target Start/End: Original strand, 33431507 - 33431663
Alignment:
Q  8 atttaatcttgtttttaaaacaaaatcatcttttccnnnnnnnncttttgtttattctcataaaaataaatgcaaattacatttaattttctctctcttt 107  Q
    |||||||||||||||||||| |||||||||||||||        |||||||||||||||||||||  |||| |||||||||||||||||  |||||||||    
T  33431507 atttaatcttgtttttaaaa-aaaatcatcttttccaagaaaaacttttgtttattctcataaaatgaaatacaaattacatttaattt--tctctcttt 33431603  T
Q  108 cattttctccataaccaatagccaataaaaattgnnnnnnnatcttcctataaaactttt 167  Q
    ||||||||| |||||||||||||||| |||||||       ||| |||||||||||||||    
T  33431604 cattttctctataaccaatagccaatgaaaattgtttttccatcctcctataaaactttt 33431663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 7 - 167
Target Start/End: Original strand, 45226083 - 45226242
Alignment:
Q  7 tatttaatcttgtttttaaaacaaaatcatcttttccnnnnnnnncttttgtttattctcataaaaataaatgcaaattacatttaattttctctctctt 106  Q
    ||||||||||||||||| ||| |||||| ||||||||        ||||||||||||||||||||| ||||||||||||||||| |||||||| ||||||    
T  45226083 tatttaatcttgttttttaaaaaaaatc-tcttttccaagaaaaacttttgtttattctcataaaattaaatgcaaattacattcaattttctatctctt 45226181  T
Q  107 tcattttctccataaccaatagccaataaaaattgnnnnnnnatcttcctataaaactttt 167  Q
    ||||||| |||||||||||||| |||| |||||||        ||||||||||||||||||    
T  45226182 tcattttttccataaccaatagtcaatgaaaattgtttttacgtcttcctataaaactttt 45226242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 7 - 167
Target Start/End: Complemental strand, 47600255 - 47600096
Alignment:
Q  7 tatttaatcttgtttttaaaacaaaatcatcttttccnnnnnnnncttttgtttattctcataaaaataaatgcaaattacatttaattttctctctctt 106  Q
    ||||||||||| ||||||||| |||||| ||||||||        ||||||||||||||||||||| ||||||||||||||||| |||||||| ||||||    
T  47600255 tatttaatcttatttttaaaaaaaaatc-tcttttccaagaaaaacttttgtttattctcataaaattaaatgcaaattacattcaattttctttctctt 47600157  T
Q  107 tcattttctccataaccaatagccaataaaaattgnnnnnnnatcttcctataaaactttt 167  Q
    ||||||| | ||||| ||||||||||| |||||||       |||||||||||||||||||    
T  47600156 tcatttttttcataaacaatagccaatgaaaattgtttttacatcttcctataaaactttt 47600096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 53 - 167
Target Start/End: Complemental strand, 12449138 - 12449024
Alignment:
Q  53 ttttgtttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaattgnnnnnnnatct 152  Q
    |||||||||||||||||||| ||||||||||||||||| |||||||||||||||| ||||| |||||||||||| |||||| |||||||       ||||    
T  12449138 ttttgtttattctcataaaattaaatgcaaattacattcaattttctctctctttgattttttccataaccaatggccaatgaaaattgtttttacatct 12449039  T
Q  153 tcctataaaactttt 167  Q
    |||||||||||||||    
T  12449038 tcctataaaactttt 12449024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 53 - 167
Target Start/End: Complemental strand, 39555757 - 39555643
Alignment:
Q  53 ttttgtttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaattgnnnnnnnatct 152  Q
    |||||||||||||||||||| ||||||||||||||||| ||| |||||||||||||||||| ||||||||||||||||||| |||||||       ||||    
T  39555757 ttttgtttattctcataaaattaaatgcaaattacattcaatgttctctctctttcattttttccataaccaatagccaatgaaaattgtttttacatct 39555658  T
Q  153 tcctataaaactttt 167  Q
    | |||||||||||||    
T  39555657 ttctataaaactttt 39555643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 52 - 141
Target Start/End: Complemental strand, 39932744 - 39932655
Alignment:
Q  52 cttttgtttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaattg 141  Q
    ||||||||||||||||||||| ||||| ||||||||||| |||||||||||||||| ||||||||||| |||||||||||||||||||||    
T  39932744 cttttgtttattctcataaaattaaatacaaattacattcaattttctctctcttttattttctccatgaccaatagccaataaaaattg 39932655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 7 - 141
Target Start/End: Original strand, 33369499 - 33369629
Alignment:
Q  7 tatttaatcttgtttttaaaacaaaatcatcttttccnnnnnnnncttttgtttattctcataaaaataaatgcaaattacatttaattttctctctctt 106  Q
    ||||||||||||||||||||| |||||| ||||||||        ||||||||||||||||||||| ||||||||||||||||| |||||  ||||||||    
T  33369499 tatttaatcttgtttttaaaa-aaaatc-tcttttccaagaaaaacttttgtttattctcataaaattaaatgcaaattacattcaattt--tctctctt 33369594  T
Q  107 tcattttctccataaccaatagccaataaaaattg 141  Q
    ||||||| ||||||||||||||||||| |||||||    
T  33369595 tcattttttccataaccaatagccaatgaaaattg 33369629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 52 - 167
Target Start/End: Original strand, 6786827 - 6786942
Alignment:
Q  52 cttttgtttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaattgnnnnnnnatc 151  Q
    ||||||||||||||||||||| |||||||||| |||||| ||||||| |||||||||||||| ||||||||||||||||||| |||||||       |||    
T  6786827 cttttgtttattctcataaaattaaatgcaaactacattcaattttcactctctttcattttttccataaccaatagccaatgaaaattgtgtttacatc 6786926  T
Q  152 ttcctataaaactttt 167  Q
    ||| ||||||||||||    
T  6786927 ttcatataaaactttt 6786942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 53 - 167
Target Start/End: Original strand, 2126028 - 2126142
Alignment:
Q  53 ttttgtttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaattgnnnnnnnatct 152  Q
    ||||||| |||||||| ||| ||||||||||||||||| |||||||||| ||||||||||| ||||||||||||||||||| |||||||       ||||    
T  2126028 ttttgttcattctcattaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatct 2126127  T
Q  153 tcctataaaactttt 167  Q
    |||||||||||||||    
T  2126128 tcctataaaactttt 2126142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 52 - 141
Target Start/End: Complemental strand, 28120927 - 28120838
Alignment:
Q  52 cttttgtttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaattg 141  Q
    ||||||||||||| ||||||| ||||||||||||||||| |||||||||||||||||||||| ||||||| ||||||||||| |||||||    
T  28120927 cttttgtttattcacataaaattaaatgcaaattacattcaattttctctctctttcattttttccataatcaatagccaatgaaaattg 28120838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 53 - 167
Target Start/End: Complemental strand, 42965985 - 42965872
Alignment:
Q  53 ttttgtttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaattgnnnnnnnatct 152  Q
    ||||||||||||| |||||| ||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||| |||||||       ||||    
T  42965985 ttttgtttattcttataaaattaaatgcaaattacattcaattttctctctctttcatttt-tccataaccaatagccaatgaaaattgtttttacatct 42965887  T
Q  153 tcctataaaactttt 167  Q
    |||||||||| ||||    
T  42965886 tcctataaaattttt 42965872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 52 - 167
Target Start/End: Complemental strand, 3875193 - 3875074
Alignment:
Q  52 cttttgtttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataacca----atagccaataaaaattgnnnnnn 147  Q
    ||||||||||||||||||||| |||||||||||| |||| |||||||||||||||||||||| ||||||||||    |||||||||||||||||          
T  3875193 cttttgtttattctcataaaattaaatgcaaatttcattcaattttctctctctttcattttttccataaccaatatatagccaataaaaattgttttta 3875094  T
Q  148 natcttcctataaaactttt 167  Q
     || ||||||||||||||||    
T  3875093 catattcctataaaactttt 3875074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 53 - 167
Target Start/End: Complemental strand, 32983341 - 32983228
Alignment:
Q  53 ttttgtttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaattgnnnnnnnatct 152  Q
    |||||||||||||||||||| ||||||||||||| ||| |||||||||||||||||||||| |||||||||||| |||||| |||||||       ||||    
T  32983341 ttttgtttattctcataaaattaaatgcaaattatattcaattttctctctctttcattttttccataaccaat-gccaatgaaaattgtttttacatct 32983243  T
Q  153 tcctataaaactttt 167  Q
    || ||||||||||||    
T  32983242 tcttataaaactttt 32983228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 52 - 141
Target Start/End: Complemental strand, 37735555 - 37735466
Alignment:
Q  52 cttttgtttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaattg 141  Q
    ||||||||||||| ||| ||| ||||||||||||||||| |||||||||||| || |||||||||||||| |||||||||||||||||||    
T  37735555 cttttgtttattcacatgaaattaaatgcaaattacattcaattttctctcttttccattttctccataatcaatagccaataaaaattg 37735466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 52 - 140
Target Start/End: Complemental strand, 6787161 - 6787074
Alignment:
Q  52 cttttgtttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaatt 140  Q
    ||||| ||||||||| |||||||||||||||| |||||| ||||| |||||||||||||||| ||||||||||||||||||||||||||    
T  6787161 cttttatttattctcgtaaaaataaatgcaaactacattcaattt-ctctctctttcattttttccataaccaatagccaataaaaatt 6787074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 59 - 167
Target Start/End: Original strand, 35691388 - 35691497
Alignment:
Q  59 ttattctcataaaaataaatgcaaattacatttaattttctctctctttca-ttttctccataaccaatagccaataaaaattgnnnnnnnatcttccta 157  Q
    |||||||||||||| ||||||||||||||||| |||||||||| ||||||| |||| |||||||||||||||||||||||||||       |||| ||||    
T  35691388 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcatttttttccataaccaatagccaataaaaattgtttttacatctcccta 35691487  T
Q  158 taaaactttt 167  Q
    ||||||||||    
T  35691488 taaaactttt 35691497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 54 - 141
Target Start/End: Original strand, 40718669 - 40718756
Alignment:
Q  54 tttgtttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaattg 141  Q
    ||||||||||||||||||| ||||||||||||||||| |||||||||| ||||||||||| || || ||||||||||||| |||||||    
T  40718669 tttgtttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttctattaccaatagccaatgaaaattg 40718756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 54 - 140
Target Start/End: Complemental strand, 2246184 - 2246098
Alignment:
Q  54 tttgtttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaatt 140  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||| || |||| ||| ||| |||||||||| ||||||    
T  2246184 tttgtttattctcataaaattaaatgcaaattacatttaattttctctctcttccactttccccacaacgaatagccaatgaaaatt 2246098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 59 - 141
Target Start/End: Original strand, 24190466 - 24190547
Alignment:
Q  59 ttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaattg 141  Q
    |||||||||||||| ||||||||||||||||| |||||||||| ||||||||||| ||||||||||||||||||| |||||||    
T  24190466 ttattctcataaaattaaatgcaaattacatt-aattttctctttctttcattttttccataaccaatagccaatgaaaattg 24190547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 170 - 240
Target Start/End: Original strand, 33431734 - 33431804
Alignment:
Q  170 ttatttagtgaacctcattaactaattattggtcctaattgtttgattattacatgcatatttgtcctttg 240  Q
    ||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  33431734 ttatttagtaaacctcattaaccaattattggtcctaattgtttgattattacatgcatatttgtcttttg 33431804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 52 - 133
Target Start/End: Original strand, 46542973 - 46543052
Alignment:
Q  52 cttttgtttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaat 133  Q
    ||||||||||||||||||||| |||||||||||| ||||||||||  |||||||||||||||||||| ||||||||||||||    
T  46542973 cttttgtttattctcataaaattaaatgcaaattgcatttaattt--tctctctttcattttctccacaaccaatagccaat 46543052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 52 - 167
Target Start/End: Complemental strand, 47014662 - 47014548
Alignment:
Q  52 cttttgtttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaattgnnnnnnnatc 151  Q
    ||||||||||||||||||||| |||||| |||| ||||| |||||||||||||||||||||| |||||||||||||| |||| |||||||       ||     
T  47014662 cttttgtttattctcataaaattaaatgtaaat-acattcaattttctctctctttcattttttccataaccaatagtcaatgaaaattgtttttacatt 47014564  T
Q  152 ttcctataaaactttt 167  Q
    ||||||||||||||||    
T  47014563 ttcctataaaactttt 47014548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 52 - 140
Target Start/End: Complemental strand, 23392337 - 23392250
Alignment:
Q  52 cttttgtttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaatt 140  Q
    ||||||||||||||||| ||| ||||||||||||||||| |||||||||| |||| ||||||||||||||||||||| |||| ||||||    
T  23392337 cttttgtttattctcatgaaattaaatgcaaattacatt-aattttctctttcttccattttctccataaccaatagtcaatgaaaatt 23392250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 7 - 141
Target Start/End: Complemental strand, 24728842 - 24728710
Alignment:
Q  7 tatttaatcttgtttttaaaacaaaatcatcttttccnnnnnnnncttttgtttattctcataaaaataaatgcaaattacatttaattttctctctctt 106  Q
    |||||||||||||||||||||  |||||||||||| |        |||||  |||||||| | ||| |||||||||||||||||||||||||||||||||    
T  24728842 tatttaatcttgtttttaaaa--aaatcatctttttcaataaaaactttttcttattctcgtgaaattaaatgcaaattacatttaattttctctctctt 24728745  T
Q  107 tcattttctccataaccaatagccaataaaaattg 141  Q
    | ||||| ||||||| |||| |||||| |||||||    
T  24728744 ttattttttccataatcaattgccaatgaaaattg 24728710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 7 - 140
Target Start/End: Original strand, 3076241 - 3076372
Alignment:
Q  7 tatttaatcttgtttttaaaacaaaatcatcttttccnnnnnnnncttttgtttattctcataaaaataaatgcaaattacatttaattttctctctctt 106  Q
    |||||||| ||||||||||||  ||||||| ||||||        |||||  |||||||||| ||| ||||||||||||||||||||||||||||| |||    
T  3076241 tatttaattttgtttttaaaa--aaatcatattttccaataaaaactttttcttattctcatgaaattaaatgcaaattacatttaattttctctcactt 3076338  T
Q  107 tcattttctccataaccaatagccaataaaaatt 140  Q
    | ||||| |||||||||||| |||||| ||||||    
T  3076339 ttattttttccataaccaattgccaatgaaaatt 3076372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 52 - 167
Target Start/End: Complemental strand, 7468135 - 7468020
Alignment:
Q  52 cttttgtttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaattgnnnnnnnatc 151  Q
    ||||||||||||||||||||| ||||||||||||||||| |||||||| |||||||||||||   | ||| ||||||||||| |||||||       |||    
T  7468135 cttttgtttattctcataaaattaaatgcaaattacattcaattttctatctctttcatttttctcttaatcaatagccaatgaaaattgtatttacatc 7468036  T
Q  152 ttcctataaaactttt 167  Q
    ||||| ||||||||||    
T  7468035 ttcctttaaaactttt 7468020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 53 - 167
Target Start/End: Complemental strand, 43667472 - 43667360
Alignment:
Q  53 ttttgtttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaattgnnnnnnnatct 152  Q
    |||||||||||||||||||| |||||| |||||||||| ||||||||  |||||||||||| |||||||||||| |||||| |||||||        |||    
T  43667472 ttttgtttattctcataaaattaaatgtaaattacattcaattttct--ctctttcattttttccataaccaatggccaatgaaaattgtttttacgtct 43667375  T
Q  153 tcctataaaactttt 167  Q
    |||||||||||||||    
T  43667374 tcctataaaactttt 43667360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 7 - 113
Target Start/End: Original strand, 50665208 - 50665313
Alignment:
Q  7 tatttaatcttgtttttaaaacaaaatcatcttttccnnnnnnnncttttgtttattctcataaaaataaatgcaaattacatttaattttctctctctt 106  Q
    ||||||||||||||||||||| ||| |||||||||||        |||||| |||||||||| ||| ||| |||||||||||||||||||||||||||||    
T  50665208 tatttaatcttgtttttaaaagaaa-tcatcttttccaataaaaacttttgcttattctcatgaaattaattgcaaattacatttaattttctctctctt 50665306  T
Q  107 tcatttt 113  Q
    |||||||    
T  50665307 tcatttt 50665313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 54 - 125
Target Start/End: Original strand, 1820406 - 1820477
Alignment:
Q  54 tttgtttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaa 125  Q
    ||||||||||||||||||| ||||||||||||||||| |||||| ||||||||||||||| | |||||||||    
T  1820406 tttgtttattctcataaaattaaatgcaaattacattcaattttttctctctttcatttttttcataaccaa 1820477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 75 - 140
Target Start/End: Complemental strand, 7876091 - 7876026
Alignment:
Q  75 aaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaatt 140  Q
    |||||||||||||||| |||||||||||||||| ||||| |||||||||||||| |||||||||||    
T  7876091 aaatgcaaattacattcaattttctctctcttttattttttccataaccaatagtcaataaaaatt 7876026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 60 - 141
Target Start/End: Complemental strand, 10558920 - 10558839
Alignment:
Q  60 tattctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaattg 141  Q
    ||||||||| ||| |||||| |||||||||| |||||| |||||||| |||||||||||||| ||||||||||| |||||||    
T  10558920 tattctcatgaaattaaatgtaaattacattaaattttttctctcttccattttctccataatcaatagccaatgaaaattg 10558839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 53 - 167
Target Start/End: Complemental strand, 46818673 - 46818559
Alignment:
Q  53 ttttgtttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaattgnnnnnnnatct 152  Q
    |||| ||||||||||||||| ||||| |||||||| || | |||||||||  |||||||||||||||||| | |||||||| |||||||       ||||    
T  46818673 ttttatttattctcataaaattaaatacaaattacgttcagttttctctcaatttcattttctccataactattagccaatgaaaattgtttttatatct 46818574  T
Q  153 tcctataaaactttt 167  Q
    |||||||||||||||    
T  46818573 tcctataaaactttt 46818559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 52 - 167
Target Start/End: Original strand, 50369947 - 50370065
Alignment:
Q  52 cttttgtttattctcataaaaataaatgcaaatta----catttaattttctctctctttcattttctccataaccaatagccaataaaaattgnnnnnn 147  Q
    ||||| ||||||||||||||| ||||| |||||||    |||| |||||||||||||||||||||| | |||||||||||||||||| ||||||          
T  50369947 cttttttttattctcataaaattaaatacaaattaattacattcaattttctctctctttcatttt-ttcataaccaatagccaatagaaattgttttta 50370045  T
Q  148 natcttcctataaaactttt 167  Q
     |||||||||||||||||||    
T  50370046 catcttcctataaaactttt 50370065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 7 - 163
Target Start/End: Complemental strand, 28016959 - 28016807
Alignment:
Q  7 tatttaatcttgtttttaaaacaaaatcatcttttccnnnnnnnncttttgtttattctcataaaaataaatgcaaattacatttaattttctctctctt 106  Q
    ||||||||||||||||| ||| |||||| ||||||||        ||||||||||||||||||||| ||||||||| ||||||| ||||||||  |||||    
T  28016959 tatttaatcttgttttttaaa-aaaatc-tcttttccaagaaaaacttttgtttattctcataaaattaaatgcaagttacattcaattttct--ctctt 28016864  T
Q  107 tcattttctccataaccaatagccaataaaaattgnnnnnnnatcttcctataaaac 163  Q
    | ||||| |  |||||||||||||||| |||||||       |||||||||||||||    
T  28016863 ttattttttttataaccaatagccaatgaaaattgtttttacatcttcctataaaac 28016807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 52 - 133
Target Start/End: Complemental strand, 13136722 - 13136644
Alignment:
Q  52 cttttgtttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaat 133  Q
    |||||||||||||| |||||| ||||||||||||| ||| ||||||||||||  |||||||| |||||||||||||||||||    
T  13136722 cttttgtttattct-ataaaattaaatgcaaattatattcaattttctctct--ttcattttttccataaccaatagccaat 13136644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 7 - 141
Target Start/End: Complemental strand, 44149047 - 44148919
Alignment:
Q  7 tatttaatcttgtttttaaaacaaaatcatcttttccnnnnnnnncttttgtttattctcataaaaataaatgcaaattacatttaattttctctctctt 106  Q
    |||||||||||||||||||||  ||||||||||||||        |||||  |||||||||| ||| |||||||||||||| |||||||||||||||       
T  44149047 tatttaatcttgtttttaaaa--aaatcatcttttccaatagaagctttttcttattctcatgaaattaaatgcaaattacgtttaattttctctctt-- 44148952  T
Q  107 tcattttctccataaccaatagccaataaaaattg 141  Q
      ||||| |||||||||||| |||||| |||||||    
T  44148951 --attttttccataaccaattgccaatgaaaattg 44148919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 52 - 140
Target Start/End: Original strand, 50012580 - 50012667
Alignment:
Q  52 cttttgtttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaatt 140  Q
    |||||||||||||| |||||| ||||||||||||||||| |||||||| ||||||| ||||| || ||||| |||| ||||| ||||||    
T  50012580 cttttgtttattcttataaaattaaatgcaaattacattcaattttctttctcttttattttttctataactaata-ccaatgaaaatt 50012667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 69 - 165
Target Start/End: Complemental strand, 5858526 - 5858430
Alignment:
Q  69 aaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaattgnnnnnnnatcttcctataaaactt 165  Q
    |||| |||||||||| | |||| ||||| |||||| |||||||||||| |||||||||||||||| |||||||       |||||||||||||||||    
T  5858526 aaaattaaatgcaaagtgcattcaatttgctctctgtttcattttctcaataaccaatagccaatgaaaattgtttttatatcttcctataaaactt 5858430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 81 - 139
Target Start/End: Complemental strand, 298812 - 298754
Alignment:
Q  81 aaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaat 139  Q
    ||||||||||||||||||||| |||| |||||||||||||| ||||||||||| |||||    
T  298812 aaattacatttaattttctctttcttccattttctccataatcaatagccaattaaaat 298754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 53 - 141
Target Start/End: Complemental strand, 3861864 - 3861778
Alignment:
Q  53 ttttgtttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaattg 141  Q
    |||| |||||||| |||||| ||||||||||||| |||||||||| |||| |||||||||| | ||||| ||||||||||| |||||||    
T  3861864 ttttttttattcttataaaattaaatgcaaattatatttaatttt-tctc-ctttcatttttttcataatcaatagccaatgaaaattg 3861778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 53 - 141
Target Start/End: Original strand, 25391674 - 25391760
Alignment:
Q  53 ttttgtttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaattg 141  Q
    |||||||||||||||||||| ||||||||||||||||| |||||| | |||||| ||  ||||||||||| | |||||||| |||||||    
T  25391674 ttttgtttattctcataaaattaaatgcaaattacattcaatttt-tatctcttcca-cttctccataactattagccaatgaaaattg 25391760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 53 - 140
Target Start/End: Complemental strand, 47303077 - 47302989
Alignment:
Q  53 ttttgtttattctcataaaaataaatgcaaattacatttaattttct-ctctctttcattttctccataaccaatagccaataaaaatt 140  Q
    ||||| |||||||||| ||| ||||||||||||||||| | ||||||  | | ||||||||||| ||||| ||||||||||| ||||||    
T  47303077 ttttgcttattctcatgaaattaaatgcaaattacattcagttttctattttttttcattttctacataatcaatagccaatgaaaatt 47302989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 69 - 165
Target Start/End: Original strand, 5950445 - 5950541
Alignment:
Q  69 aaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaattgnnnnnnnatcttcctataaaactt 165  Q
    |||| |||||| ||| | |||||||||| |||||||||||||||| || |||||||||  ||||| |||||||       |||||||||||||||||    
T  5950445 aaaattaaatgtaaagtgcatttaatttgctctctctttcattttttcaataaccaatgaccaatgaaaattgtttttacatcttcctataaaactt 5950541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 74 - 141
Target Start/End: Original strand, 42724105 - 42724172
Alignment:
Q  74 taaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaattg 141  Q
    |||||||||||| |||||||||| ||||| || ||||||||| |||||| |||| | |||||||||||    
T  42724105 taaatgcaaattgcatttaatttgctctccctatcattttcttcataacaaataactaataaaaattg 42724172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 69 - 126
Target Start/End: Complemental strand, 8889845 - 8889788
Alignment:
Q  69 aaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaat 126  Q
    |||| |||||| ||| | |||| ||||||||||||||||||||||||| |||||||||    
T  8889845 aaaattaaatgtaaagtgcattcaattttctctctctttcattttctcaataaccaat 8889788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 52 - 97
Target Start/End: Original strand, 11241032 - 11241077
Alignment:
Q  52 cttttgtttattctcataaaaataaatgcaaattacatttaatttt 97  Q
    ||||||||||||||||||||| |||||| |||||||||| ||||||    
T  11241032 cttttgtttattctcataaaattaaatgtaaattacattcaatttt 11241077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 77 - 141
Target Start/End: Original strand, 14086966 - 14087028
Alignment:
Q  77 atgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaattg 141  Q
    |||||||||||||| |||||  ||||||||| ||||| |||||||| |||||||||| |||||||    
T  14086966 atgcaaattacattcaattt--tctctcttttattttttccataactaatagccaatgaaaattg 14087028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 59 - 165
Target Start/End: Original strand, 43765290 - 43765396
Alignment:
Q  59 ttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaattgnnnnnnnatcttcctat 158  Q
    |||||||||  ||| || |||||||||| ||| |||||||| |||||| |||||||| |||||| |||| ||||| |||| ||       ||||||||||    
T  43765290 ttattctcacgaaattagatgcaaattaaattcaattttctttctcttccattttctgcataacaaataaccaatgaaaaatgtttttacatcttcctat 43765389  T
Q  159 aaaactt 165  Q
    |||||||    
T  43765390 aaaactt 43765396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 97 - 141
Target Start/End: Complemental strand, 32318687 - 32318643
Alignment:
Q  97 tctctctctttcattttctccataaccaatagccaataaaaattg 141  Q
    ||||||||| ||||||||||||||||||||| ||||| |||||||    
T  32318687 tctctctctctcattttctccataaccaataaccaatgaaaattg 32318643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 69 - 165
Target Start/End: Original strand, 16688142 - 16688238
Alignment:
Q  69 aaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaattgnnnnnnnatcttcctataaaactt 165  Q
    |||| |||||||||| | |||||||| | || | |||||||||||||| |||||||| | ||||| |||||||       |||||||||||||||||    
T  16688142 aaaattaaatgcaaagttcatttaatatgctttttctttcattttctcaataaccaacaaccaatgaaaattgtttttacatcttcctataaaactt 16688238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 69 - 165
Target Start/End: Original strand, 37538815 - 37538911
Alignment:
Q  69 aaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaattgnnnnnnnatcttcctataaaactt 165  Q
    |||| ||| |||||| | |||| ||||| ||| ||||||||||||||| |||||||| | ||||| |||||||       |||||||||||||||||    
T  37538815 aaaattaactgcaaagtgcattcaatttgctccctctttcattttctcgataaccaacaaccaatgaaaattgtctttacatcttcctataaaactt 37538911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 74 - 140
Target Start/End: Original strand, 47026658 - 47026725
Alignment:
Q  74 taaatgcaaattacatttaattttctctctctttcattttctccataaccaa-tagccaataaaaatt 140  Q
    ||||||||||||||||| || ||| | ||||||||||||| ||| ||||||| |||||||| ||||||    
T  47026658 taaatgcaaattacattcaaatttttttctctttcattttttccttaaccaattagccaatgaaaatt 47026725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 126
Target Start/End: Complemental strand, 32742342 - 32742300
Alignment:
Q  84 ttacatttaattttctctctctttcattttctccataaccaat 126  Q
    |||||||||||||||||| ||||||||||| ||||||| ||||    
T  32742342 ttacatttaattttctctttctttcattttttccataatcaat 32742300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 52 - 97
Target Start/End: Original strand, 1034847 - 1034892
Alignment:
Q  52 cttttgtttattctcataaaaataaatgcaaattacatttaatttt 97  Q
    ||||||||||||||||| ||| ||||||| ||||||||| ||||||    
T  1034847 cttttgtttattctcatgaaattaaatgcgaattacattcaatttt 1034892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 109 - 167
Target Start/End: Original strand, 11241073 - 11241131
Alignment:
Q  109 attttctccataaccaatagccaataaaaattgnnnnnnnatcttcctataaaactttt 167  Q
    ||||| ||||||||||||||||||| |||||||       |||||||||||||||||||    
T  11241073 attttttccataaccaatagccaatgaaaattggttttacatcttcctataaaactttt 11241131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 68 - 121
Target Start/End: Complemental strand, 23873986 - 23873933
Alignment:
Q  68 taaaaataaatgcaaattacatttaattttctctctctttcattttctccataa 121  Q
    ||||| |||||||||||| ||||||||||  ||||| ||| |||||||||||||    
T  23873986 taaaattaaatgcaaattgcatttaatttgttctcttttttattttctccataa 23873933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 92 - 141
Target Start/End: Complemental strand, 34102105 - 34102056
Alignment:
Q  92 aattttctctctctttcattttctccataaccaatagccaataaaaattg 141  Q
    ||||| |||||||||||| |||||| |||||||||| ||||| |||||||    
T  34102105 aatttgctctctctttcactttctcaataaccaataaccaatgaaaattg 34102056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 114
Target Start/End: Original strand, 43359696 - 43359741
Alignment:
Q  69 aaaaataaatgcaaattacatttaattttctctctctttcattttc 114  Q
    |||| |||||||||| |||||| ||||| |||||||||||||||||    
T  43359696 aaaattaaatgcaaagtacattcaatttgctctctctttcattttc 43359741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 74; Significance: 5e-34; HSPs: 41)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 53 - 167
Target Start/End: Complemental strand, 11262055 - 11261941
Alignment:
Q  53 ttttgtttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaattgnnnnnnnatct 152  Q
    |||||||||||||||||||| ||||||||||||||||| |||||||||| ||||||||||| ||||||||||||||||||| |||||||       ||||    
T  11262055 ttttgtttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatct 11261956  T
Q  153 tcctataaaactttt 167  Q
    |||||||||||||||    
T  11261955 tcctataaaactttt 11261941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 52 - 163
Target Start/End: Original strand, 20039091 - 20039202
Alignment:
Q  52 cttttgtttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaattgnnnnnnnatc 151  Q
    |||||||| |||||||||||| |||||||||||||||||||||||||| ||||||||||||| | |||||||||||||||||||||||||       |||    
T  20039091 cttttgttaattctcataaaattaaatgcaaattacatttaattttctatctctttcatttttttcataaccaatagccaataaaaattggttttacatc 20039190  T
Q  152 ttcctataaaac 163  Q
    ||||||||||||    
T  20039191 ttcctataaaac 20039202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 52 - 167
Target Start/End: Original strand, 20644003 - 20644118
Alignment:
Q  52 cttttgtttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaattgnnnnnnnatc 151  Q
    ||||||||||||||||| ||| ||||||||||||||||| ||||||| |||||||||||||| ||||||||||||||||||| |||||||       |||    
T  20644003 cttttgtttattctcatgaaattaaatgcaaattacattcaattttccctctctttcattttttccataaccaatagccaatgaaaattgtttttacatc 20644102  T
Q  152 ttcctataaaactttt 167  Q
    ||||||||||||||||    
T  20644103 ttcctataaaactttt 20644118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 53 - 167
Target Start/End: Original strand, 32110992 - 32111106
Alignment:
Q  53 ttttgtttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaattgnnnnnnnatct 152  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| || |||||||||||||| |||| |||||||       ||||    
T  32110992 ttttgtttattctcataaaattaaatgcaaattacatttaattttctctctctttcatattttccataaccaatagtcaatgaaaattgtttttacatct 32111091  T
Q  153 tcctataaaactttt 167  Q
    |||||| ||||||||    
T  32111092 tcctatgaaactttt 32111106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 7 - 167
Target Start/End: Original strand, 42273595 - 42273751
Alignment:
Q  7 tatttaatcttgtttttaaaacaaaatcatcttttccnnnnnnnncttttgtttattctcataaaaataaatgcaaattacatttaattttctctctctt 106  Q
    ||||||||||||||||||||| |||||||||||||||         |||||||||||||||||||| |||||||||||| |||| |||||  ||||||||    
T  42273595 tatttaatcttgtttttaaaa-aaaatcatcttttccaagatttt-ttttgtttattctcataaaattaaatgcaaattgcattcaattt--tctctctt 42273690  T
Q  107 tcattttctccataaccaatagccaataaaaattgnnnnnnnatcttcctataaaactttt 167  Q
    ||||||||||||||||||||||||||| |||||||       |||||| ||||||||||||    
T  42273691 tcattttctccataaccaatagccaatgaaaattgtttttacatcttcttataaaactttt 42273751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 59 - 167
Target Start/End: Original strand, 6686380 - 6686488
Alignment:
Q  59 ttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaattgnnnnnnnatcttcctat 158  Q
    |||||||||||||| ||||||||||||||||| |||||||||| ||||||||||| ||||||||||||||||||| |||||||       ||||||||||    
T  6686380 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 6686479  T
Q  159 aaaactttt 167  Q
    |||||||||    
T  6686480 aaaactttt 6686488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 7 - 141
Target Start/End: Original strand, 4463305 - 4463438
Alignment:
Q  7 tatttaatcttgtttttaaaacaaaatcatcttttccnnnnnnnncttttgtttattctcataaaaataaatgcaaattacatttaattttctctctctt 106  Q
    ||||||||||||||||||||| ||| |||||||||||        |||||| |||| ||||| ||| ||| |||||||||||||||||||||||||||||    
T  4463305 tatttaatcttgtttttaaaagaaa-tcatcttttccaataaaaacttttgcttatactcatgaaattaattgcaaattacatttaattttctctctctt 4463403  T
Q  107 tcattttctccataaccaatagccaataaaaattg 141  Q
    ||||||| ||||||||||||||||| | |||||||    
T  4463404 tcattttttccataaccaatagccagtgaaaattg 4463438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 53 - 167
Target Start/End: Complemental strand, 37562933 - 37562819
Alignment:
Q  53 ttttgtttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaattgnnnnnnnatct 152  Q
    |||||||||||||||||||| ||||||||||||||||| |||||||||| ||||||||||| ||||||| ||||||| ||| |||||||       ||||    
T  37562933 ttttgtttattctcataaaattaaatgcaaattacattcaattttctctgtctttcattttttccataaacaatagctaatgaaaattgtttttacatct 37562834  T
Q  153 tcctataaaactttt 167  Q
    |||||||||||||||    
T  37562833 tcctataaaactttt 37562819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 52 - 140
Target Start/End: Complemental strand, 38130288 - 38130200
Alignment:
Q  52 cttttgtttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaatt 140  Q
    ||||||||||||||||||||| |||||| | |||||||| |||||||||||||||||||||| ||||||||||||||||||| ||||||    
T  38130288 cttttgtttattctcataaaattaaatgtagattacattcaattttctctctctttcattttttccataaccaatagccaatgaaaatt 38130200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 59 - 167
Target Start/End: Complemental strand, 43590127 - 43590019
Alignment:
Q  59 ttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaattgnnnnnnnatcttcctat 158  Q
    |||||||||||||| ||||||||||||||||| |||||||||| ||||||||||| ||||||||||||||||||| |||||||       |||| |||||    
T  43590127 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatctccctat 43590028  T
Q  159 aaaactttt 167  Q
    |||||||||    
T  43590027 aaaactttt 43590019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 53 - 167
Target Start/End: Complemental strand, 37522761 - 37522646
Alignment:
Q  53 ttttgtttattctcataaaaat-aaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaattgnnnnnnnatc 151  Q
    |||||| ||||||||||||||| |||||||||||||||| |||||||||| ||||||||||| ||||||| ||||||||||| |||||||       |||    
T  37522761 ttttgtctattctcataaaaattaaatgcaaattacattcaattttctctgtctttcattttttccataaacaatagccaatgaaaattgtttttacatc 37522662  T
Q  152 ttcctataaaactttt 167  Q
    ||||||||||||||||    
T  37522661 ttcctataaaactttt 37522646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 52 - 167
Target Start/End: Original strand, 38280836 - 38280951
Alignment:
Q  52 cttttgtttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaattgnnnnnnnatc 151  Q
    ||||||||||||||||||||| ||||||||||||| ||| |||||||||||||||||||||| ||||||| ||||| ||||| |||||||       ||     
T  38280836 cttttgtttattctcataaaattaaatgcaaattatattcaattttctctctctttcattttttccataatcaataaccaatgaaaattgtttttacatt 38280935  T
Q  152 ttcctataaaactttt 167  Q
    ||||||||||||||||    
T  38280936 ttcctataaaactttt 38280951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 6 - 141
Target Start/End: Original strand, 19413085 - 19413219
Alignment:
Q  6 ttatttaatcttgtttttaaaacaaaatcatcttttccnnnnnnnncttttgtttattctcataaaaataaatgcaaattacatttaattttctctctct 105  Q
    ||||||||||||||||| |||| |||||||||||||||        |||||   ||||||||| ||| ||||||||||||||||||||||||| ||||||    
T  19413085 ttatttaatcttgttttaaaaa-aaaatcatcttttccaataaaaactttttcatattctcatgaaattaaatgcaaattacatttaattttccctctct 19413183  T
Q  106 ttcattttctccataaccaatagccaataaaaattg 141  Q
    || ||||| |||||||||||| |||||| |||||||    
T  19413184 tttattttttccataaccaattgccaatgaaaattg 19413219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 52 - 134
Target Start/End: Complemental strand, 5984287 - 5984205
Alignment:
Q  52 cttttgtttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaata 134  Q
    ||||||||||||||||||||| |||||| |||||||||| ||| ||||||||||||||||||||| |||||||||| ||||||    
T  5984287 cttttgtttattctcataaaattaaatgtaaattacattaaatattctctctctttcattttctctataaccaataaccaata 5984205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 7 - 141
Target Start/End: Original strand, 25840809 - 25840942
Alignment:
Q  7 tatttaatcttgtttttaaaacaaaatcatcttttccnnnnnnnncttttgtttattctcataaaaataaatgcaaattacatttaattttctctctctt 106  Q
    ||||||||||||||||| ||| |||||||||||||||        |||||  |||||||||| ||| |||||||||||||||||||||||||||||||||    
T  25840809 tatttaatcttgttttttaaa-aaaatcatcttttccaataaaaactttttcttattctcatgaaattaaatgcaaattacatttaattttctctctctt 25840907  T
Q  107 tcattttctccataaccaatagccaataaaaattg 141  Q
    | ||||| ||||||| |||| | |||| |||||||    
T  25840908 ttattttttccataaacaattgtcaatgaaaattg 25840942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 52 - 167
Target Start/End: Original strand, 34425320 - 34425434
Alignment:
Q  52 cttttgtttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaattgnnnnnnnatc 151  Q
    ||||||||||||||||||||| ||||||||||||| ||| |||||||||||||||| ||||| ||||||| ||||||||||| |||||||       ||     
T  34425320 cttttgtttattctcataaaattaaatgcaaattatattcaattttctctctcttttatttt-tccataatcaatagccaatgaaaattgtttttacata 34425418  T
Q  152 ttcctataaaactttt 167  Q
    ||||||||||||||||    
T  34425419 ttcctataaaactttt 34425434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 53 - 163
Target Start/End: Original strand, 32017694 - 32017803
Alignment:
Q  53 ttttgtttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaattgnnnnnnnatct 152  Q
    |||||||||||||||||||| ||||||||||||||||| || |||||||||||||| |||| |||||||||||||| |||| |||||||       ||||    
T  32017694 ttttgtttattctcataaaattaaatgcaaattacattcaactttctctctctttcgtttt-tccataaccaatagacaatgaaaattgtttttacatct 32017792  T
Q  153 tcctataaaac 163  Q
    |||||||||||    
T  32017793 tcctataaaac 32017803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 7 - 133
Target Start/End: Original strand, 8225409 - 8225531
Alignment:
Q  7 tatttaatcttgtttttaaaacaaaatcatcttttccnnnnnnnncttttgtttattctcataaaaataaatgcaaattacatttaattttctctctctt 106  Q
    ||||||||||||||||| ||| |||||| ||||||||        ||||||||||||||||||||| |||||||||||||| || |||||  ||||||||    
T  8225409 tatttaatcttgttttttaaa-aaaatc-tcttttccaagaaaaacttttgtttattctcataaaattaaatgcaaattacgttcaattt--tctctctt 8225504  T
Q  107 tcattttctccataaccaatagccaat 133  Q
    ||||||| |||||||||||||||||||    
T  8225505 tcattttttccataaccaatagccaat 8225531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 6 - 141
Target Start/End: Complemental strand, 39505448 - 39505316
Alignment:
Q  6 ttatttaatcttgtttttaaaacaaaatcatcttttccnnnnnnnncttttgtttattctcataaaaataaatgcaaattacatttaattttctctctct 105  Q
    |||||||||||| ||||||||| ||||| |||||||||        |||||  |||||||||| ||| ||||||||||||||||||||||||||||||||    
T  39505448 ttatttaatcttatttttaaaa-aaaat-atcttttccaataaaaactttttcttattctcatgaaattaaatgcaaattacatttaattttctctctct 39505351  T
Q  106 ttcattttctccataaccaatagccaataaaaattg 141  Q
    || ||||| |||||||| ||| |||||| |||||||    
T  39505350 tttatttt-tccataacgaattgccaatgaaaattg 39505316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 52 - 141
Target Start/End: Complemental strand, 9957588 - 9957502
Alignment:
Q  52 cttttgtttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaattg 141  Q
    ||||||||||||||||||||| ||||||||||||||||| || ||  ||||||||||||||| | ||||||||||||||||| |||||||    
T  9957588 cttttgtttattctcataaaattaaatgcaaattacattcaactt--tctctctttcatttt-ttcataaccaatagccaatgaaaattg 9957502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 59 - 141
Target Start/End: Original strand, 17351384 - 17351466
Alignment:
Q  59 ttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaattg 141  Q
    |||||||||| ||| |||||| |||||||||| |||||||||||| | ||||||||||||||| ||||||||||| |||||||    
T  17351384 ttattctcatgaaattaaatgaaaattacattcaattttctctctatgtcattttctccataatcaatagccaattaaaattg 17351466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 7 - 139
Target Start/End: Complemental strand, 41625727 - 41625596
Alignment:
Q  7 tatttaatcttgtttttaaaacaaaatcatcttttccnnnnnnnncttttgtttattctcataaaaataaatgcaaattacatttaattttctctctctt 106  Q
    |||||| |||||||||||||| |||||||||||||||        ||| |||||||| |||| ||| ||||| ||||||||||||||||||| |||||||    
T  41625727 tatttattcttgtttttaaaaaaaaatcatcttttccaacaaaaacttatgtttattttcatgaaattaaattcaaattacatttaattttccctctctt 41625628  T
Q  107 tcattttctccataaccaatagccaataaaaat 139  Q
     |||||| | ||||| ||||||| ||| |||||    
T  41625627 ccatttt-ttcataatcaatagcgaatgaaaat 41625596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 52 - 141
Target Start/End: Original strand, 11858309 - 11858398
Alignment:
Q  52 cttttgtttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaattg 141  Q
    ||||||||||||||||| ||  ||||| |||||||| || |||||| ||||| || |||||||||||||| ||||| |||||||||||||    
T  11858309 cttttgtttattctcatgaacttaaatacaaattacgttcaattttttctcttttccattttctccataatcaataaccaataaaaattg 11858398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 52 - 141
Target Start/End: Complemental strand, 43454495 - 43454406
Alignment:
Q  52 cttttgtttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaattg 141  Q
    |||||||||| ||||||| || |||||| |||||||||| |||||||||||||||| ||||||| | ||||||||||  ||| |||||||    
T  43454495 cttttgtttaatctcatagaattaaatgtaaattacattcaattttctctctcttttattttcttcttaaccaatagtaaatgaaaattg 43454406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 53 - 105
Target Start/End: Complemental strand, 12730151 - 12730099
Alignment:
Q  53 ttttgtttattctcataaaaataaatgcaaattacatttaattttctctctct 105  Q
    |||||||||||||||||||| ||||||||||||||||| ||||||||||||||    
T  12730151 ttttgtttattctcataaaattaaatgcaaattacattcaattttctctctct 12730099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 97 - 141
Target Start/End: Complemental strand, 12792903 - 12792859
Alignment:
Q  97 tctctctctttcattttctccataaccaatagccaataaaaattg 141  Q
    ||||||||||||||||||||||||||||||||||||| |||||||    
T  12792903 tctctctctttcattttctccataaccaatagccaatgaaaattg 12792859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 69 - 165
Target Start/End: Complemental strand, 12912449 - 12912353
Alignment:
Q  69 aaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaattgnnnnnnnatcttcctataaaactt 165  Q
    |||| |||||||||| | |||||||||| |||||||||||||||| || | |||||||| ||||| |||||||       |||||||||||||||||    
T  12912449 aaaattaaatgcaaagtgcatttaatttgctctctctttcattttttcaacaaccaataaccaatgaaaattgtttttacatcttcctataaaactt 12912353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 55 - 105
Target Start/End: Original strand, 23233391 - 23233441
Alignment:
Q  55 ttgtttattctcataaaaataaatgcaaattacatttaattttctctctct 105  Q
    |||||||||||||||||||||||||||||||||||| || | |||||||||    
T  23233391 ttgtttattctcataaaaataaatgcaaattacattcaactctctctctct 23233441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 52 - 105
Target Start/End: Complemental strand, 104394 - 104341
Alignment:
Q  52 cttttgtttattctcataaaaataaatgcaaattacatttaattttctctctct 105  Q
    ||||||| ||||||||||||| |||||||| |||||||| ||||||||||||||    
T  104394 cttttgtctattctcataaaattaaatgcatattacattcaattttctctctct 104341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 59 - 140
Target Start/End: Original strand, 7071234 - 7071315
Alignment:
Q  59 ttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaatt 140  Q
    |||||||||| ||| ||||| ||||||||||| ||||||| | ||||| |||||||||| ||| |||||| |||| ||||||    
T  7071234 ttattctcatgaaattaaatacaaattacattcaattttcacgctcttccattttctccgtaatcaatagtcaatgaaaatt 7071315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 53 - 105
Target Start/End: Complemental strand, 12792972 - 12792919
Alignment:
Q  53 ttttgtttattctcataaaaataaatgcaaattacatttaattt-tctctctct 105  Q
    |||||||||||||||||||| ||||||||||||||||| ||||| |||||||||    
T  12792972 ttttgtttattctcataaaattaaatgcaaattacattcaatttctctctctct 12792919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 64 - 141
Target Start/End: Complemental strand, 42104408 - 42104331
Alignment:
Q  64 ctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaattg 141  Q
    ||||| ||| |||||||||| |||||| |||||| || ||||| ||||||||||||||  |||||||||| |||||||    
T  42104408 ctcatgaaattaaatgcaaaatacattcaattttatcactcttccattttctccataattaatagccaatgaaaattg 42104331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 97 - 141
Target Start/End: Complemental strand, 12730001 - 12729957
Alignment:
Q  97 tctctctctttcattttctccataaccaatagccaataaaaattg 141  Q
    ||||||||| ||||||||||||||||||||||||||| |||||||    
T  12730001 tctctctctctcattttctccataaccaatagccaatgaaaattg 12729957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 69 - 165
Target Start/End: Complemental strand, 10154083 - 10153987
Alignment:
Q  69 aaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaattgnnnnnnnatcttcctataaaactt 165  Q
    |||| |||||||||| | |||| ||||| || |||||||||||||||| || ||||||| ||||| |||||||       |||||||||||||||||    
T  10154083 aaaattaaatgcaaagtgcattcaatttgctatctctttcattttctcaatgaccaataaccaatgaaaattgtttttacatcttcctataaaactt 10153987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 74 - 140
Target Start/End: Original strand, 8146734 - 8146800
Alignment:
Q  74 taaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaatt 140  Q
    ||||||||||||||| ||||||| ||||| || ||||||||||||||||  ||| ||||| ||||||    
T  8146734 taaatgcaaattacaattaatttgctctccctctcattttctccataacagataaccaatgaaaatt 8146800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 97 - 138
Target Start/End: Original strand, 23233445 - 23233486
Alignment:
Q  97 tctctctctttcattttctccataaccaatagccaataaaaa 138  Q
    ||||||||||||||||||||||||||||||||  ||||||||    
T  23233445 tctctctctttcattttctccataaccaatagttaataaaaa 23233486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 53 - 117
Target Start/End: Complemental strand, 446060 - 445996
Alignment:
Q  53 ttttgtttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttctcc 117  Q
    |||| |||||| |||| ||| |||||| ||||| |||| |||||| |||||||||||||||||||    
T  446060 ttttttttattatcatgaaattaaatgaaaattgcattcaattttttctctctttcattttctcc 445996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 59 - 134
Target Start/End: Original strand, 1238522 - 1238597
Alignment:
Q  59 ttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaata 134  Q
    ||||||| |||||| ||||  ||||||||||| |||||||| ||||   ||||||||| ||||||||||| |||||    
T  1238522 ttattcttataaaattaaaaacaaattacattcaattttctttctcccccattttctctataaccaataggcaata 1238597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 69 - 165
Target Start/End: Complemental strand, 3463970 - 3463874
Alignment:
Q  69 aaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaattgnnnnnnnatcttcctataaaactt 165  Q
    |||| |||||||||| | |||| ||||| |||||| |||||||||||| |||| |||   |||||||||||||       |||||||||||||||||    
T  3463970 aaaattaaatgcaaagtgcattcaatttgctctctttttcattttctctataatcaactaccaataaaaattgtttttatatcttcctataaaactt 3463874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 67 - 141
Target Start/End: Complemental strand, 29493669 - 29493595
Alignment:
Q  67 ataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaattg 141  Q
    |||||| | ||||||||||| ||| ||||| | ||||||   |||||||||||||||||||  ||||||||||||    
T  29493669 ataaaattgaatgcaaattatattcaatttacactctctcctattttctccataaccaataatcaataaaaattg 29493595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 165
Target Start/End: Complemental strand, 5369155 - 5369090
Alignment:
Q  100 ctctctttcattttctccataaccaatagccaataaaaattgnnnnnnnatcttcctataaaactt 165  Q
    ||||||||||||||||| |||||||| | ||||| |||||||       |||||||||||||||||    
T  5369155 ctctctttcattttctcaataaccaacaaccaatgaaaattgtttttacatcttcctataaaactt 5369090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 74; Significance: 5e-34; HSPs: 42)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 52 - 141
Target Start/End: Original strand, 29203493 - 29203582
Alignment:
Q  52 cttttgtttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaattg 141  Q
    ||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  29203493 cttttgtttattctcataaaattaaatgcaaattacattcaattttctctctctttcattttttccataaccaatagccaatgaaaattg 29203582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 52 - 167
Target Start/End: Original strand, 20716167 - 20716282
Alignment:
Q  52 cttttgtttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaattgnnnnnnnatc 151  Q
    ||||||||||||||||||||| ||||||||||||||||| ||||||||| |||||||||||| ||||||||||||||||||| |||||||       |||    
T  20716167 cttttgtttattctcataaaattaaatgcaaattacattcaattttctcactctttcattttttccataaccaatagccaatgaaaattgtttttacatc 20716266  T
Q  152 ttcctataaaactttt 167  Q
    || |||||||||||||    
T  20716267 tttctataaaactttt 20716282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 7 - 141
Target Start/End: Complemental strand, 35310951 - 35310818
Alignment:
Q  7 tatttaatcttgtttttaaaacaaaatcatcttttccnnnnnnnncttttgtttattctcataaaaataaatgcaaattacatttaattttctctctctt 106  Q
    ||||||||||||||||| ||| ||||||||||||| |        ||||||||||||||||| ||| ||||| |||||||||||||||||||||||||||    
T  35310951 tatttaatcttgttttttaaa-aaaatcatctttttcaataaaaacttttgtttattctcatgaaattaaatacaaattacatttaattttctctctctt 35310853  T
Q  107 tcattttctccataaccaatagccaataaaaattg 141  Q
     |||||| ||||||||||||||||||| |||||||    
T  35310852 ccattttttccataaccaatagccaatgaaaattg 35310818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 52 - 141
Target Start/End: Complemental strand, 1585512 - 1585423
Alignment:
Q  52 cttttgtttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaattg 141  Q
    ||||||||||||||||||||| |||||| |||||||||| ||||||||||||||| |||||||||||||| |||||||||||||||||||    
T  1585512 cttttgtttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttctccataatcaatagccaataaaaattg 1585423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 53 - 167
Target Start/End: Original strand, 14332748 - 14332862
Alignment:
Q  53 ttttgtttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaattgnnnnnnnatct 152  Q
    |||||||||||||||||||| ||||||||||||||||| |||||||||| ||||||||||| | |||||||||| ||||||||||||||       ||||    
T  14332748 ttttgtttattctcataaaattaaatgcaaattacattcaattttctctttctttcatttttttcataaccaatggccaataaaaattgtttttacatct 14332847  T
Q  153 tcctataaaactttt 167  Q
    |||||||||||||||    
T  14332848 tcctataaaactttt 14332862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 53 - 167
Target Start/End: Original strand, 20281579 - 20281693
Alignment:
Q  53 ttttgtttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaattgnnnnnnnatct 152  Q
    |||||||||||||||||||| ||||||||||||||||| |||||||| | ||||||||||| ||||||||||||||||||| |||||||       ||||    
T  20281579 ttttgtttattctcataaaattaaatgcaaattacattcaattttctttttctttcattttttccataaccaatagccaatgaaaattgtttttacatct 20281678  T
Q  153 tcctataaaactttt 167  Q
    |||||||||||||||    
T  20281679 tcctataaaactttt 20281693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 53 - 167
Target Start/End: Original strand, 26916313 - 26916427
Alignment:
Q  53 ttttgtttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaattgnnnnnnnatct 152  Q
    |||||||||||||||||||| ||||||||||||||||| |||||| | | ||||||||||| |||||||||||||||||||||||||||       ||||    
T  26916313 ttttgtttattctcataaaattaaatgcaaattacattcaattttatttttctttcattttttccataaccaatagccaataaaaattgtttttacatct 26916412  T
Q  153 tcctataaaactttt 167  Q
    |||||||||||||||    
T  26916413 tcctataaaactttt 26916427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 7 - 167
Target Start/End: Original strand, 4058658 - 4058817
Alignment:
Q  7 tatttaatcttgtttttaaaacaaaatcatcttttccnnnnnnnncttttgtttattctcataaaaataaatgcaaattacatttaattttctctctctt 106  Q
    ||||||||||||||||| ||| |||||| | ||||||        ||||| ||||||||||||||| |||||||||||| |||| |||||||||||||||    
T  4058658 tatttaatcttgttttttaaa-aaaatctttttttccaagaaaaacttttatttattctcataaaattaaatgcaaatttcattcaattttctctctctt 4058756  T
Q  107 tcattttctccataaccaatagccaataaaaattgnnnnnnnatcttcctataaaactttt 167  Q
    ||||||| ||||||||||||| ||||| |||||||       |||||||||||||||||||    
T  4058757 tcattttttccataaccaataaccaatgaaaattgtttttacatcttcctataaaactttt 4058817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 59 - 167
Target Start/End: Original strand, 47867873 - 47867981
Alignment:
Q  59 ttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaattgnnnnnnnatcttcctat 158  Q
    |||||||||||||| ||||||||||||||||| |||||||||| ||||||||||| ||||||||||||||||||| |||||||       ||||||||||    
T  47867873 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 47867972  T
Q  159 aaaactttt 167  Q
    |||||||||    
T  47867973 aaaactttt 47867981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 59 - 167
Target Start/End: Original strand, 2229241 - 2229349
Alignment:
Q  59 ttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaattgnnnnnnnatcttcctat 158  Q
    |||||||||||| | ||||||||||||||||| |||||||| | ||||||||||| |||||||||||||||||||||||||||       ||||||||||    
T  2229241 ttattctcataatattaaatgcaaattacattcaattttctttttctttcattttttccataaccaatagccaataaaaattgtttttacatcttcctat 2229340  T
Q  159 aaaactttt 167  Q
    |||||||||    
T  2229341 aaaactttt 2229349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 52 - 141
Target Start/End: Complemental strand, 5483443 - 5483354
Alignment:
Q  52 cttttgtttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaattg 141  Q
    ||||||||||||||||| ||| |||||||| |||||||| ||||||||||||||| ||||||||||||||||| |||||||| |||||||    
T  5483443 cttttgtttattctcatgaaattaaatgcatattacattcaattttctctctcttccattttctccataaccagtagccaatgaaaattg 5483354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 53 - 167
Target Start/End: Complemental strand, 41414774 - 41414661
Alignment:
Q  53 ttttgtttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaattgnnnnnnnatct 152  Q
    ||||||||||||| |||||| ||||||||||||||||| |||||| ||||||||||||||| | ||||| |||||||||||||||||||       ||||    
T  41414774 ttttgtttattcttataaaattaaatgcaaattacattcaattttttctctctttcatttt-ttcataatcaatagccaataaaaattgtttttacatct 41414676  T
Q  153 tcctataaaactttt 167  Q
    |||||||||||||||    
T  41414675 tcctataaaactttt 41414661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 7 - 140
Target Start/End: Complemental strand, 52535794 - 52535662
Alignment:
Q  7 tatttaatcttgtttttaaaacaaaatcatcttttccnnnnnnnncttttgtttattctcataaaaataaatgcaaattacatttaattttctctctctt 106  Q
    |||||||||||||||||  || |||||| ||||||||        ||||||||||||||||||||| ||||||||||||| ||| |||||||||||||||    
T  52535794 tatttaatcttgtttttttaaaaaaatc-tcttttccaagaaaaacttttgtttattctcataaaattaaatgcaaattatattcaattttctctctctt 52535696  T
Q  107 tcattttctccataaccaatagccaataaaaatt 140  Q
    ||| ||| || |||||||||||||||| ||||||    
T  52535695 tcactttttctataaccaatagccaatgaaaatt 52535662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 53 - 167
Target Start/End: Complemental strand, 56318234 - 56318120
Alignment:
Q  53 ttttgtttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaattgnnnnnnnatct 152  Q
    ||||||||||| |||||||| |||||| |||||||||| |||||||||||||||||||||| ||||||||||||||| ||| |||||||       ||||    
T  56318234 ttttgtttattatcataaaattaaatgtaaattacattcaattttctctctctttcattttttccataaccaatagctaatgaaaattgtttttacatct 56318135  T
Q  153 tcctataaaactttt 167  Q
    ||||||||| |||||    
T  56318134 tcctataaacctttt 56318120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 52 - 141
Target Start/End: Complemental strand, 17794706 - 17794617
Alignment:
Q  52 cttttgtttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaattg 141  Q
    ||||||||||||||||||||| |||||| |||||||||| ||||||||||||||| || ||| ||||||| ||||||||||| |||||||    
T  17794706 cttttgtttattctcataaaattaaatgtaaattacattcaattttctctctcttccaatttttccataatcaatagccaatgaaaattg 17794617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 65 - 167
Target Start/End: Original strand, 24940365 - 24940467
Alignment:
Q  65 tcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaattgnnnnnnnatcttcctataaaact 164  Q
    |||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||  |||||||       |||||| |||||||||    
T  24940365 tcataaaattaaatggaaattacatttaattttctctctctttcattttctccataaccaataaccaacgaaaattgtttttacatcttcttataaaact 24940464  T
Q  165 ttt 167  Q
    |||    
T  24940465 ttt 24940467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 52 - 141
Target Start/End: Original strand, 39078144 - 39078233
Alignment:
Q  52 cttttgtttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaattg 141  Q
    ||||||||||||||||||||| |||||||| |||||||| |||||||| ||||||||||||| || ||||| |||||||||| |||||||    
T  39078144 cttttgtttattctcataaaattaaatgcacattacattcaattttctttctctttcattttttcaataactaatagccaatgaaaattg 39078233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 53 - 141
Target Start/End: Original strand, 35529660 - 35529748
Alignment:
Q  53 ttttgtttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaattg 141  Q
    |||||||||| ||||||||| |||||||||||||| || |||||| ||||||||||||||| ||||||||||||| ||||| |||||||    
T  35529660 ttttgtttatgctcataaaattaaatgcaaattactttcaattttatctctctttcattttttccataaccaatacccaatgaaaattg 35529748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 7 - 141
Target Start/End: Original strand, 42915473 - 42915606
Alignment:
Q  7 tatttaatcttgtttttaaaacaaaatcatcttttccnnnnnnnncttttgtttattctcataaaaataaatgcaaattacatttaattttctctctctt 106  Q
    |||||||||||||||||||||  ||||||| ||||||        |||||  |||||||||| ||| |||||||||||||||||||||||||||||||||    
T  42915473 tatttaatcttgtttttaaaa--aaatcatattttccaataaaaactttttcttattctcatgaaattaaatgcaaattacatttaattttctctctctt 42915570  T
Q  107 tca-ttttctccataaccaatagccaataaaaattg 141  Q
    | | |||| |||||||||||| |||||| |||||||    
T  42915571 ttatttttttccataaccaattgccaatgaaaattg 42915606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 52 - 167
Target Start/End: Original strand, 55580656 - 55580772
Alignment:
Q  52 cttttgtttattctcataaaaataaatgcaaattacatttaattttctctctctttca-ttttctccataaccaatagccaataaaaattgnnnnnnnat 150  Q
    ||||||||||||||||||||| ||||||||||||||||| || ||||||| ||||||| |||| |||||||| |||||||||| |||||||       ||    
T  55580656 cttttgtttattctcataaaattaaatgcaaattacattaaaatttctctttctttcatttttttccataactaatagccaatgaaaattgtttttacat 55580755  T
Q  151 cttcctataaaactttt 167  Q
    ||||||||| |||||||    
T  55580756 cttcctatacaactttt 55580772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 52 - 167
Target Start/End: Original strand, 10069684 - 10069799
Alignment:
Q  52 cttttgtttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaattgnnnnnnnatc 151  Q
    ||||||||||||||||||||| ||||||||||| ||||| |||||||  | ||||||| ||| ||||||||||||||||||| |||||||       |||    
T  10069684 cttttgtttattctcataaaattaaatgcaaataacattcaattttccttttctttcactttttccataaccaatagccaatgaaaattgtttttacatc 10069783  T
Q  152 ttcctataaaactttt 167  Q
    || |||||||||||||    
T  10069784 tttctataaaactttt 10069799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 53 - 141
Target Start/End: Complemental strand, 28669164 - 28669077
Alignment:
Q  53 ttttgtttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaattg 141  Q
    |||||||||||||||||||| ||||| ||||||||||| |||||||||||||||||||||| | |||||| |||| ||||| |||||||    
T  28669164 ttttgtttattctcataaaattaaatacaaattacattcaattttctctctctttcatttt-ttcataactaataaccaatgaaaattg 28669077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 53 - 141
Target Start/End: Complemental strand, 50080615 - 50080527
Alignment:
Q  53 ttttgtttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaattg 141  Q
    ||||| |||||| ||| ||| ||||||||||||||||| ||||||| ||||||| |||||| ||||||| |||||||||||||||||||    
T  50080615 ttttgcttattcgcatgaaattaaatgcaaattacattcaattttcactctcttccattttatccataatcaatagccaataaaaattg 50080527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 81 - 167
Target Start/End: Complemental strand, 16604982 - 16604896
Alignment:
Q  81 aaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaattgnnnnnnnatcttcctataaaactttt 167  Q
    |||||||||| |||||||||||||||||||||| |||||||| |||||||||| |||||||       |||||||||||||||||||    
T  16604982 aaattacattcaattttctctctctttcattttttccataactaatagccaatgaaaattgttttaacatcttcctataaaactttt 16604896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 7 - 141
Target Start/End: Complemental strand, 48793834 - 48793704
Alignment:
Q  7 tatttaatcttgtttttaaaacaaaatcatcttttccnnnnnnnncttttgtttattctcataaaaataaatgcaaattacatttaattttctctctctt 106  Q
    ||||||||||||||||| |||  ||||||||||||||        |||||  |||||||||| ||| ||||||||||||||||||||||||||  |||||    
T  48793834 tatttaatcttgttttttaaa--aaatcatcttttccaataaaaactttttcttattctcatgaaattaaatgcaaattacatttaattttct--ctctt 48793739  T
Q  107 tcattttctccataaccaatagccaataaaaattg 141  Q
    | ||||| | |||||||||| |||||| |||||||    
T  48793738 ttatttttttcataaccaattgccaatgaaaattg 48793704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 7 - 140
Target Start/End: Complemental strand, 8683512 - 8683383
Alignment:
Q  7 tatttaatcttgtttttaaaacaaaatcatcttttccnnnnnnnncttttgtttattctcataaaaataaatgcaaattacatttaattttctctctctt 106  Q
    ||||||||||||||||||||| |||||||||||||||         |||| || |||||||| ||| ||||| ||||||||||||||||||||  |||||    
T  8683512 tatttaatcttgtttttaaaa-aaaatcatcttttccaatatttttttttctt-attctcatgaaattaaatacaaattacatttaattttct--ctctt 8683417  T
Q  107 tcattttctccataaccaatagccaataaaaatt 140  Q
    | ||||| |||||||||||| |||||| ||||||    
T  8683416 ttattttttccataaccaattgccaatgaaaatt 8683383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 81 - 167
Target Start/End: Original strand, 7654633 - 7654719
Alignment:
Q  81 aaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaattgnnnnnnnatcttcctataaaactttt 167  Q
    |||||||||| |||||||||| ||||||||||| ||||||| ||||||||||| |||||||       |||||||||||||||||||    
T  7654633 aaattacattcaattttctctttctttcattttttccataatcaatagccaatgaaaattgtttttatatcttcctataaaactttt 7654719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 52 - 141
Target Start/End: Original strand, 50145723 - 50145812
Alignment:
Q  52 cttttgtttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaattg 141  Q
    ||||||| |||| |||| ||| ||||||  ||||||||||||||||| ||||||| |||||||||||| | ||||||||||| |||||||    
T  50145723 cttttgtatattttcatgaaattaaatgttaattacatttaattttccctctcttccattttctccattatcaatagccaatgaaaattg 50145812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 53 - 141
Target Start/End: Complemental strand, 25297386 - 25297298
Alignment:
Q  53 ttttgtttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaattg 141  Q
    ||||| |||||||||| ||| |||||| |||||||||| |||||||  ||||||  ||||||||||||| ||||||||||| |||||||    
T  25297386 ttttgcttattctcatgaaattaaatgtaaattacattcaattttccatctcttctattttctccataatcaatagccaatgaaaattg 25297298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 69 - 141
Target Start/End: Complemental strand, 8178387 - 8178315
Alignment:
Q  69 aaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaattg 141  Q
    |||| |||||||||| | |||| ||||| ||||||||||||||||||| |||||||||| |||||| ||||||    
T  8178387 aaaattaaatgcaaagtgcattcaatttgctctctctttcattttctcaataaccaataaccaatacaaattg 8178315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 52 - 100
Target Start/End: Complemental strand, 21722831 - 21722783
Alignment:
Q  52 cttttgtttattctcataaaaataaatgcaaattacatttaattttctc 100  Q
    ||||||||||||||||| ||| ||||| |||||||||||||||||||||    
T  21722831 cttttgtttattctcatgaaattaaatacaaattacatttaattttctc 21722783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 74 - 141
Target Start/End: Complemental strand, 17799277 - 17799210
Alignment:
Q  74 taaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaattg 141  Q
    |||||||||||| ||||||||||  |||| || |||||||||||||||| |||| ||||| |||||||    
T  17799277 taaatgcaaattgcatttaatttgttctccctctcattttctccataacaaataaccaatgaaaattg 17799210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 82 - 140
Target Start/End: Original strand, 5815486 - 5815544
Alignment:
Q  82 aattacatttaattttctctctctttcattttctccataaccaatagccaataaaaatt 140  Q
    ||||||||| ||||||||||||||| | |||| ||||||| |||||| |||||||||||    
T  5815486 aattacattcaattttctctctcttcctttttttccataatcaatagtcaataaaaatt 5815544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 53 - 115
Target Start/End: Original strand, 14583717 - 14583779
Alignment:
Q  53 ttttgtttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttct 115  Q
    ||||| |||||||||| ||| ||||||||||||||||| |||| || ||||||| ||||||||    
T  14583717 ttttgcttattctcatgaaattaaatgcaaattacattcaattatcactctcttccattttct 14583779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 53 - 141
Target Start/End: Complemental strand, 12002799 - 12002716
Alignment:
Q  53 ttttgtttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaattg 141  Q
    ||||| ||||| |||| ||| ||||||||||||||||| ||| |     ||||| || |||||||||||||||| ||||||||||||||    
T  12002799 ttttgcttattttcatgaaattaaatgcaaattacattcaatat-----ctcttccagtttctccataaccaatggccaataaaaattg 12002716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 69 - 141
Target Start/End: Complemental strand, 47516339 - 47516267
Alignment:
Q  69 aaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaattg 141  Q
    |||| ||||| |||| | ||||| |||| ||||||||||||||||||| |||||||| | ||||| |||||||    
T  47516339 aaaattaaatacaaagtgcatttgatttgctctctctttcattttctcaataaccaacaaccaatgaaaattg 47516267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 100
Target Start/End: Complemental strand, 32280151 - 32280104
Alignment:
Q  53 ttttgtttattctcataaaaataaatgcaaattacatttaattttctc 100  Q
    ||||| |||||||||| ||| ||||||||||||||||| |||||||||    
T  32280151 ttttgcttattctcatgaaactaaatgcaaattacattcaattttctc 32280104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 141
Target Start/End: Original strand, 19351833 - 19351923
Alignment:
Q  52 cttttgtttattctcataaaaataaatgcaaattacatttaa-ttttctctctctttcattttctccataaccaatagccaataaaaattg 141  Q
    |||||| ||||| | || ||| ||||||||||||||||| || |||||||||| || |||| | | |||||| |||||||||| |||||||    
T  19351833 cttttgcttattttgatgaaattaaatgcaaattacattcaatttttctctctattccattgttttcataactaatagccaatgaaaattg 19351923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 52 - 121
Target Start/End: Complemental strand, 32323426 - 32323358
Alignment:
Q  52 cttttgtttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataa 121  Q
    |||||| ||||| |||| ||| |||||| ||||||| || ||||||||||||||| ||||||||| ||||    
T  32323426 cttttgcttattatcatgaaattaaatgtaaattac-ttcaattttctctctcttccattttctcaataa 32323358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 126
Target Start/End: Original strand, 53848471 - 53848528
Alignment:
Q  69 aaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaat 126  Q
    ||||||||||||||| | |||| ||||| || ||||||||||||| || |||||||||    
T  53848471 aaaaataaatgcaaagtgcattcaatttgctttctctttcattttttcaataaccaat 53848528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 140
Target Start/End: Complemental strand, 5841904 - 5841856
Alignment:
Q  92 aattttctctctctttcattttctccataaccaatagccaataaaaatt 140  Q
    ||||| |||||||||||||||| || |||||||||| ||||| ||||||    
T  5841904 aatttgctctctctttcattttttcaataaccaataaccaatgaaaatt 5841856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 165
Target Start/End: Complemental strand, 46070639 - 46070574
Alignment:
Q  100 ctctctttcattttctccataaccaatagccaataaaaattgnnnnnnnatcttcctataaaactt 165  Q
    ||||||||||||||||| |||||||| | ||||| |||||||       |||||||||||||||||    
T  46070639 ctctctttcattttctcaataaccaacaaccaatgaaaattgtttttacatcttcctataaaactt 46070574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 52 - 167
Target Start/End: Complemental strand, 44943 - 44828
Alignment:
Q  52 cttttgtttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaattgnnnnnnnatc 151  Q
    ||||||||||||||| ||||| ||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||| |||||||       ||     
T  44943 cttttgtttattctcgtaaaattaaatgcaaattacatttaattttccctctctttcattttttccataaccaatagccaatgaaaattgttttttaata 44844  T
Q  152 ttcctataaaactttt 167  Q
    ||||||||||||||||    
T  44843 ttcctataaaactttt 44828  T

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Target: scaffold0442 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0442
Description:

Target: scaffold0442; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 53 - 167
Target Start/End: Original strand, 10035 - 10149
Alignment:
Q  53 ttttgtttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaattgnnnnnnnatct 152  Q
    ||||||||||||||||| || ||||||||||||||||| |||||||||||||||||||||| |||||||||||||| |||| |||||||       ||||    
T  10035 ttttgtttattctcatacaattaaatgcaaattacattcaattttctctctctttcattttttccataaccaatagtcaatgaaaattgtttttacatct 10134  T
Q  153 tcctataaaactttt 167  Q
    |||||||||||||||    
T  10135 tcctataaaactttt 10149  T

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Target: scaffold0774 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0774
Description:

Target: scaffold0774; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 55 - 167
Target Start/End: Complemental strand, 3597 - 3485
Alignment:
Q  55 ttgtttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaattgnnnnnnnatcttc 154  Q
    ||||||||||||||| || ||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||| ||||||        ||||||    
T  3597 ttgtttattctcatacaattaaatgcaaattacattcaattttctctctctttcattttttccataaccaatagccaatgaaaattatttttacatcttc 3498  T
Q  155 ctataaaactttt 167  Q
    |||||||||||||    
T  3497 ctataaaactttt 3485  T

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Target: scaffold0018 (Bit Score: 62; Significance: 7e-27; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 53 - 167
Target Start/End: Original strand, 154851 - 154965
Alignment:
Q  53 ttttgtttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaattgnnnnnnnatct 152  Q
    |||| ||||||||||||||| ||||||||||||||||| |||||||||| ||||||||||| |||||||||||||||||||  ||||||       ||||    
T  154851 ttttttttattctcataaaattaaatgcaaattacattaaattttctctatctttcattttttccataaccaatagccaatgtaaattgtttttacatct 154950  T
Q  153 tcctataaaactttt 167  Q
    | |||||||||||||    
T  154951 ttctataaaactttt 154965  T

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Target: scaffold0300 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0300
Description:

Target: scaffold0300; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 59 - 167
Target Start/End: Complemental strand, 738 - 630
Alignment:
Q  59 ttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaattgnnnnnnnatcttcctat 158  Q
    |||||||||||||| ||||||||||||||||| |||||| ||| ||||||||||| ||||||||||||||||||| |||||||       |||| |||||    
T  738 ttattctcataaaattaaatgcaaattacattcaattttatctttctttcattttttccataaccaatagccaatgaaaattgtttttacatctccctat 639  T
Q  159 aaaactttt 167  Q
    |||||||||    
T  638 aaaactttt 630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 60; Significance: 1e-25; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 7 - 141
Target Start/End: Original strand, 157740 - 157872
Alignment:
Q  7 tatttaatcttgtttttaaaacaaaatcatcttttccnnnnnnnncttttgtttattctcataaaaataaatgcaaattacatttaattttctctctctt 106  Q
    |||||||||||||||||||||  | |||||||||| |        |||||  |||||||||| ||| |||||||||||||||||||||||||||||||||    
T  157740 tatttaatcttgtttttaaaa--atatcatctttttcagtaaaaactttttcttattctcatgaaattaaatgcaaattacatttaattttctctctctt 157837  T
Q  107 tcattttctccataaccaatagccaataaaaattg 141  Q
    | ||||| |||||||||||| |||||| |||||||    
T  157838 ttattttttccataaccaattgccaatgaaaattg 157872  T

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Target: scaffold0009; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 52 - 141
Target Start/End: Complemental strand, 52774 - 52685
Alignment:
Q  52 cttttgtttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaattg 141  Q
    |||||| ||||| |||| ||| ||||||| |||||||||||||||||||||||||  ||||||||||||| |||||| |||| |||||||    
T  52774 cttttgcttattttcatgaaattaaatgcgaattacatttaattttctctctcttctattttctccataatcaatagtcaatgaaaattg 52685  T

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Target: scaffold0045 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 53 - 167
Target Start/End: Original strand, 77947 - 78061
Alignment:
Q  53 ttttgtttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaattgnnnnnnnatct 152  Q
    |||||||||||||||||||| |||||| |||||||||| ||||||| || ||||||||||| |||||||||||| |||||| |||||||       ||||    
T  77947 ttttgtttattctcataaaattaaatgtaaattacattcaattttcactttctttcattttttccataaccaatggccaatgaaaattgtttttacatct 78046  T
Q  153 tcctataaaactttt 167  Q
    ||||||| |||||||    
T  78047 tcctatacaactttt 78061  T

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Target: scaffold0132 (Bit Score: 56; Significance: 3e-23; HSPs: 2)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 52 - 127
Target Start/End: Original strand, 1001 - 1076
Alignment:
Q  52 cttttgtttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaata 127  Q
    ||||||||||||||||||||| |||| |||||||||||| ||||||||| |||||||||||| |||||||||||||    
T  1001 cttttgtttattctcataaaattaaacgcaaattacattgaattttctccctctttcattttttccataaccaata 1076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 52 - 127
Target Start/End: Original strand, 8961 - 9036
Alignment:
Q  52 cttttgtttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaata 127  Q
    ||||||||||||||||||||| |||| |||||||||||| ||||||||| |||||||||||| |||||||||||||    
T  8961 cttttgtttattctcataaaattaaacgcaaattacattgaattttctccctctttcattttttccataaccaata 9036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 58 - 141
Target Start/End: Original strand, 40174 - 40257
Alignment:
Q  58 tttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaattg 141  Q
    ||||||||||| ||| ||||||||||||||||| || |||||||||| | |||||| || |||||||||||||||| |||||||    
T  40174 tttattctcatgaaattaaatgcaaattacattcaactttctctctcatccattttttctataaccaatagccaatgaaaattg 40257  T

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Target: scaffold0012 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 52 - 138
Target Start/End: Original strand, 160239 - 160325
Alignment:
Q  52 cttttgtttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttctccataaccaatagccaataaaaa 138  Q
    |||||| ||||||| || ||| |||||  |||||||||| |||||||||| |||| ||||||  |||||||||||||||||| ||||    
T  160239 cttttgcttattcttatgaaattaaatataaattacattcaattttctctttcttccatttttcccataaccaatagccaatgaaaa 160325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 53 - 115
Target Start/End: Complemental strand, 233658 - 233596
Alignment:
Q  53 ttttgtttattctcataaaaataaatgcaaattacatttaattttctctctctttcattttct 115  Q
    ||||| |||||||||| ||| ||||||||||||||||| |||| || ||||||| ||||||||    
T  233658 ttttgcttattctcatgaaattaaatgcaaattacattcaattatcactctcttccattttct 233596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1786 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold1786
Description:

Target: scaffold1786; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 52 - 100
Target Start/End: Original strand, 853 - 900
Alignment:
Q  52 cttttgtttattctcataaaaataaatgcaaattacatttaattttctc 100  Q
    ||||||||||||||||| ||| ||||||||||||||| |||||||||||    
T  853 cttttgtttattctcatgaaattaaatgcaaattaca-ttaattttctc 900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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