View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12637_low_36 (Length: 243)

Name: NF12637_low_36
Description: NF12637
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12637_low_36
NF12637_low_36
[»] chr3 (32 HSPs)
chr3 (10-226)||(12248329-12248545)
chr3 (10-222)||(23758404-23758616)
chr3 (10-222)||(13382153-13382366)
chr3 (10-222)||(13392747-13392960)
chr3 (10-220)||(4744864-4745074)
chr3 (10-220)||(5511820-5512030)
chr3 (10-220)||(5546505-5546715)
chr3 (10-220)||(16477405-16477615)
chr3 (10-220)||(5626861-5627071)
chr3 (10-220)||(12295704-12295914)
chr3 (10-220)||(41684800-41685010)
chr3 (10-220)||(5875146-5875356)
chr3 (10-220)||(24661041-24661251)
chr3 (10-189)||(9992794-9992973)
chr3 (10-220)||(24392956-24393167)
chr3 (10-189)||(6499864-6500043)
chr3 (10-212)||(8775839-8776040)
chr3 (10-212)||(18485172-18485373)
chr3 (10-212)||(38195906-38196107)
chr3 (10-212)||(39373236-39373437)
chr3 (10-212)||(28323701-28323902)
chr3 (10-182)||(6219538-6219710)
chr3 (12-183)||(16390427-16390598)
chr3 (10-183)||(19779600-19779773)
chr3 (10-184)||(37867664-37867838)
chr3 (10-184)||(37876182-37876356)
chr3 (10-180)||(20682617-20682787)
chr3 (100-222)||(10654248-10654369)
chr3 (10-180)||(14466815-14466985)
chr3 (10-180)||(13122889-13123059)
chr3 (10-104)||(10635920-10636014)
chr3 (17-185)||(29470675-29470843)
[»] chr2 (16 HSPs)
chr2 (10-222)||(9907060-9907272)
chr2 (10-222)||(9772231-9772446)
chr2 (10-222)||(40223439-40223651)
chr2 (10-220)||(43346507-43346717)
chr2 (10-220)||(10268090-10268300)
chr2 (10-220)||(10278667-10278877)
chr2 (42-222)||(34803303-34803483)
chr2 (10-220)||(11404345-11404559)
chr2 (10-212)||(35254150-35254351)
chr2 (10-212)||(35264759-35264960)
chr2 (10-212)||(27222537-27222738)
chr2 (10-182)||(24337264-24337436)
chr2 (10-184)||(29245393-29245567)
chr2 (10-184)||(43083835-43084009)
chr2 (10-180)||(22959203-22959373)
chr2 (10-179)||(4211085-4211254)
[»] chr4 (15 HSPs)
chr4 (10-222)||(451716-451928)
chr4 (10-222)||(30935979-30936191)
chr4 (10-222)||(21997556-21997768)
chr4 (10-220)||(55754716-55754926)
chr4 (10-220)||(36019477-36019687)
chr4 (10-220)||(10750056-10750266)
chr4 (10-220)||(10963825-10964035)
chr4 (10-226)||(18761969-18762184)
chr4 (10-212)||(24641466-24641667)
chr4 (10-212)||(27657799-27658000)
chr4 (10-184)||(24026926-24027100)
chr4 (10-182)||(17919294-17919466)
chr4 (10-184)||(19953843-19954017)
chr4 (10-180)||(16257112-16257282)
chr4 (12-184)||(40469482-40469654)
[»] chr1 (17 HSPs)
chr1 (10-222)||(12731595-12731807)
chr1 (10-222)||(12742188-12742400)
chr1 (10-220)||(7508387-7508597)
chr1 (10-220)||(36245931-36246141)
chr1 (10-220)||(38096173-38096383)
chr1 (10-220)||(51655375-51655585)
chr1 (10-212)||(35400043-35400244)
chr1 (10-212)||(35647568-35647769)
chr1 (10-212)||(47617437-47617637)
chr1 (10-212)||(5834323-5834524)
chr1 (10-212)||(3172719-3172920)
chr1 (10-184)||(4168401-4168575)
chr1 (10-184)||(19180085-19180259)
chr1 (10-182)||(5649257-5649429)
chr1 (10-182)||(21864824-21864996)
chr1 (10-180)||(12622677-12622847)
chr1 (17-185)||(153158-153326)
[»] chr5 (34 HSPs)
chr5 (10-222)||(15994353-15994565)
chr5 (10-222)||(31842987-31843199)
chr5 (10-220)||(23371531-23371741)
chr5 (10-220)||(23706378-23706588)
chr5 (10-220)||(36583571-36583781)
chr5 (10-220)||(42052390-42052600)
chr5 (10-220)||(9345562-9345772)
chr5 (10-220)||(15768362-15768572)
chr5 (10-220)||(24589126-24589336)
chr5 (10-220)||(30228518-30228728)
chr5 (10-220)||(37731024-37731234)
chr5 (10-220)||(17616641-17616851)
chr5 (10-220)||(17728498-17728708)
chr5 (10-220)||(31358115-31358325)
chr5 (10-220)||(6985320-6985530)
chr5 (10-220)||(14039619-14039829)
chr5 (10-220)||(14448098-14448308)
chr5 (10-220)||(14559130-14559340)
chr5 (10-220)||(22685025-22685235)
chr5 (10-220)||(23305868-23306078)
chr5 (10-220)||(24817913-24818123)
chr5 (10-220)||(27469583-27469793)
chr5 (10-220)||(27043281-27043491)
chr5 (10-220)||(39491959-39492169)
chr5 (10-212)||(35225084-35225285)
chr5 (10-182)||(40399989-40400161)
chr5 (10-184)||(5291675-5291849)
chr5 (10-184)||(27604554-27604728)
chr5 (14-187)||(31447510-31447683)
chr5 (10-183)||(39361270-39361443)
chr5 (10-180)||(22156074-22156244)
chr5 (10-225)||(36697196-36697431)
chr5 (95-185)||(1110295-1110385)
chr5 (95-185)||(20796728-20796818)
[»] chr7 (23 HSPs)
chr7 (10-222)||(466541-466752)
chr7 (10-220)||(2715185-2715395)
chr7 (10-220)||(8011635-8011845)
chr7 (10-220)||(9086382-9086592)
chr7 (10-220)||(40051652-40051862)
chr7 (10-220)||(26698677-26698887)
chr7 (10-220)||(24735878-24736088)
chr7 (10-220)||(26399644-26399854)
chr7 (10-220)||(11097162-11097376)
chr7 (10-212)||(1988702-1988903)
chr7 (10-212)||(11006351-11006552)
chr7 (10-212)||(42866992-42867193)
chr7 (10-185)||(21001956-21002131)
chr7 (10-184)||(5686723-5686897)
chr7 (10-184)||(9434427-9434601)
chr7 (10-184)||(6876791-6876965)
chr7 (12-189)||(19992966-19993143)
chr7 (10-182)||(22090372-22090544)
chr7 (10-180)||(4213219-4213389)
chr7 (10-180)||(17959623-17959793)
chr7 (10-180)||(168090-168260)
chr7 (10-178)||(8618587-8618755)
chr7 (107-181)||(15887291-15887365)
[»] chr6 (22 HSPs)
chr6 (10-222)||(12856061-12856273)
chr6 (10-220)||(26865906-26866116)
chr6 (10-220)||(3662458-3662668)
chr6 (10-220)||(25788842-25789052)
chr6 (10-220)||(27342841-27343051)
chr6 (10-220)||(27403581-27403791)
chr6 (10-220)||(16931508-16931718)
chr6 (10-220)||(12726317-12726527)
chr6 (10-220)||(26026533-26026743)
chr6 (10-220)||(17983618-17983832)
chr6 (10-185)||(9122013-9122188)
chr6 (10-189)||(27373928-27374107)
chr6 (10-189)||(27464281-27464460)
chr6 (12-184)||(25590360-25590532)
chr6 (10-180)||(34816655-34816825)
chr6 (10-178)||(32971358-32971526)
chr6 (10-225)||(27385525-27385760)
chr6 (10-225)||(27475938-27476173)
chr6 (10-225)||(4631999-4632234)
chr6 (10-225)||(32310543-32310778)
chr6 (93-184)||(7669375-7669466)
chr6 (107-181)||(12359298-12359372)
[»] chr8 (19 HSPs)
chr8 (10-220)||(209087-209297)
chr8 (10-220)||(722710-722920)
chr8 (10-220)||(29077856-29078066)
chr8 (10-220)||(32087203-32087413)
chr8 (10-220)||(242959-243168)
chr8 (10-220)||(796329-796538)
chr8 (10-222)||(15766081-15766296)
chr8 (10-222)||(15790218-15790433)
chr8 (10-213)||(3358139-3358342)
chr8 (10-220)||(36294075-36294285)
chr8 (10-220)||(9342280-9342490)
chr8 (10-212)||(13687498-13687699)
chr8 (10-212)||(36079089-36079290)
chr8 (10-184)||(26112468-26112642)
chr8 (10-184)||(19129938-19130112)
chr8 (10-180)||(6152292-6152462)
chr8 (10-225)||(44482268-44482503)
chr8 (107-181)||(19226134-19226208)
chr8 (107-181)||(30324259-30324333)
[»] scaffold0133 (1 HSPs)
scaffold0133 (10-220)||(32279-32489)
[»] scaffold0906 (1 HSPs)
scaffold0906 (10-225)||(3424-3645)
[»] scaffold0105 (1 HSPs)
scaffold0105 (10-212)||(46482-46683)
[»] scaffold1216 (1 HSPs)
scaffold1216 (12-184)||(267-439)
[»] scaffold0454 (1 HSPs)
scaffold0454 (10-212)||(2420-2642)
[»] scaffold0199 (2 HSPs)
scaffold0199 (96-201)||(23787-23892)
scaffold0199 (10-124)||(23885-23999)
[»] scaffold0022 (1 HSPs)
scaffold0022 (17-185)||(52481-52649)
[»] scaffold0747 (1 HSPs)
scaffold0747 (12-74)||(3567-3629)
[»] scaffold0398 (2 HSPs)
scaffold0398 (107-185)||(3338-3416)
scaffold0398 (107-185)||(11593-11671)
[»] scaffold1002 (1 HSPs)
scaffold1002 (96-185)||(2863-2952)
[»] scaffold0251 (1 HSPs)
scaffold0251 (107-181)||(23758-23832)


Alignment Details
Target: chr3 (Bit Score: 201; Significance: 1e-110; HSPs: 32)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 10 - 226
Target Start/End: Original strand, 12248329 - 12248545
Alignment:
Q  10 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaatgaagggaaaaggatgagctact 109  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||    
T  12248329 tggacatcactccttactatccagaagaagaatacatcacaagggctgctagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 12248428  T
Q  110 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaacactagcttgttttttacttttgt 209  Q
    ||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12248429 tcagaagaaggatgatcagatcaagcatctcttagaacagttgtttaagcaagcccaaccttagttgcacacccaacactagcttgttttttacttttgt 12248528  T
Q  210 tcttagtagctttatct 226  Q
    |||||||||||||||||    
T  12248529 tcttagtagctttatct 12248545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 10 - 222
Target Start/End: Complemental strand, 23758616 - 23758404
Alignment:
Q  10 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaatgaagggaaaaggatgagctact 109  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  23758616 tggacatcactccttactatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 23758517  T
Q  110 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaacactagcttgttttttacttttgt 209  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  23758516 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaacactaacttgttttttacttttgt 23758417  T
Q  210 tcttagtagcttt 222  Q
    |||||||||||||    
T  23758416 tcttagtagcttt 23758404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 10 - 222
Target Start/End: Original strand, 13382153 - 13382366
Alignment:
Q  10 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaagga-aatgaagggaaaaggatgagctac 108  Q
    ||||||||||||||| ||||||||| ||||| ||||||||||||||||| |||||||| |||||| ||||||| | ||||| ||||||||||||||||||    
T  13382153 tggacatcactcctttctatccagaggaagagtacatcacaagggctgctagaattcaggctgggtataaaagaagaatga-gggaaaaggatgagctac 13382251  T
Q  109 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaacactagcttg-ttttttactttt 207  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  13382252 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaacactagcttgtttttttactttt 13382351  T
Q  208 gttcttagtagcttt 222  Q
    |||||||||||||||    
T  13382352 gttcttagtagcttt 13382366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 10 - 222
Target Start/End: Original strand, 13392747 - 13392960
Alignment:
Q  10 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaagga-aatgaagggaaaaggatgagctac 108  Q
    ||||||||||||||| ||||||||| ||||| ||||||||||||||||| |||||||| |||||| ||||||| | ||||| ||||||||||||||||||    
T  13392747 tggacatcactcctttctatccagaggaagagtacatcacaagggctgctagaattcaggctgggtataaaagaagaatga-gggaaaaggatgagctac 13392845  T
Q  109 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaacactagcttg-ttttttactttt 207  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  13392846 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaacactagcttgtttttttactttt 13392945  T
Q  208 gttcttagtagcttt 222  Q
    |||||||||||||||    
T  13392946 gttcttagtagcttt 13392960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 10 - 220
Target Start/End: Complemental strand, 4745074 - 4744864
Alignment:
Q  10 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaagga-aatgaagggaaaaggatgagctac 108  Q
    ||||||||||||||| ||||||||||||||| |||||||| |||||||| |||||||| |||||  ||||||| | ||||| ||||||||||||||||||    
T  4745074 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaaagaagaatga-gggaaaaggatgagctac 4744976  T
Q  109 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaacactagcttgttttttacttttg 208  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  4744975 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactctagcttgttttttacttttg 4744876  T
Q  209 ttcttagtagct 220  Q
    ||||||||||||    
T  4744875 ttcttagtagct 4744864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 10 - 220
Target Start/End: Complemental strand, 5512030 - 5511820
Alignment:
Q  10 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaagga-aatgaagggaaaaggatgagctac 108  Q
    ||||||||||||||| ||||||||||||||| |||||||| |||||||| |||||||| |||||  ||||||| | ||||| ||||||||||||||||||    
T  5512030 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaaagaagaatga-gggaaaaggatgagctac 5511932  T
Q  109 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaacactagcttgttttttacttttg 208  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  5511931 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactctagcttgttttttacttttg 5511832  T
Q  209 ttcttagtagct 220  Q
    ||||||||||||    
T  5511831 ttcttagtagct 5511820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 10 - 220
Target Start/End: Original strand, 5546505 - 5546715
Alignment:
Q  10 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaagga-aatgaagggaaaaggatgagctac 108  Q
    ||||||||||||||| ||||||||||||||| |||||||| |||||||| |||||||| |||||  ||||||| | ||||| ||||||||||||||||||    
T  5546505 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaaagaagaatga-gggaaaaggatgagctac 5546603  T
Q  109 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaacactagcttgttttttacttttg 208  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  5546604 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactctagcttgttttttacttttg 5546703  T
Q  209 ttcttagtagct 220  Q
    ||||||||||||    
T  5546704 ttcttagtagct 5546715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 10 - 220
Target Start/End: Complemental strand, 16477615 - 16477405
Alignment:
Q  10 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaagga-aatgaagggaaaaggatgagctac 108  Q
    ||||||||||||||| ||||||||||||||| |||||||| |||||||| |||||||| |||||  ||||| | | ||||| ||||||||||||||||||    
T  16477615 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaacgaagaatga-gggaaaaggatgagctac 16477517  T
Q  109 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaacactagcttgttttttacttttg 208  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  16477516 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactctagcttgttttttacttttg 16477417  T
Q  209 ttcttagtagct 220  Q
    ||||||||||||    
T  16477416 ttcttagtagct 16477405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 10 - 220
Target Start/End: Original strand, 5626861 - 5627071
Alignment:
Q  10 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaagga-aatgaagggaaaaggatgagctac 108  Q
    ||||||||||||||| ||||||||||||||| |||||||| |||||||| |||||||| |||||  ||||| | | ||||| ||||||||||||||||||    
T  5626861 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaacgaagaatga-gggaaaaggatgagctac 5626959  T
Q  109 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaacactagcttgttttttacttttg 208  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  5626960 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactctagcttgttttttacttttg 5627059  T
Q  209 ttcttagtagct 220  Q
    ||||| ||||||    
T  5627060 ttcttcgtagct 5627071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 10 - 220
Target Start/End: Original strand, 12295704 - 12295914
Alignment:
Q  10 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaagga-aatgaagggaaaaggatgagctac 108  Q
    ||||||||||||||| ||||||||||||||| |||||||| |||||||| |||||||| |||||  ||||| | | ||||| ||||||||||||||||||    
T  12295704 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaacgaagaatga-gggaaaaggatgagctac 12295802  T
Q  109 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaacactagcttgttttttacttttg 208  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  12295803 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactctagcttgttttttacttttg 12295902  T
Q  209 ttcttagtagct 220  Q
    ||||| ||||||    
T  12295903 ttcttcgtagct 12295914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 10 - 220
Target Start/End: Complemental strand, 41685010 - 41684800
Alignment:
Q  10 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaagga-aatgaagggaaaaggatgagctac 108  Q
    ||||||||||||||| ||||||||||||||| |||||||| |||||||| |||||||| |||||  ||||| | | ||||| ||||||||||||||||||    
T  41685010 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaacgaagaatga-gggaaaaggatgagctac 41684912  T
Q  109 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaacactagcttgttttttacttttg 208  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  41684911 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactctagcttgttttttacttttg 41684812  T
Q  209 ttcttagtagct 220  Q
    ||||| ||||||    
T  41684811 ttcttcgtagct 41684800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 10 - 220
Target Start/End: Original strand, 5875146 - 5875356
Alignment:
Q  10 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaagga-aatgaagggaaaaggatgagctac 108  Q
    ||||||||||||||| ||||||||||||||| |||||||| |||||||| |||||||| |||||   ||||   | ||||| ||||||||||||||||||    
T  5875146 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatttaaacaaagaatga-gggaaaaggatgagctac 5875244  T
Q  109 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaacactagcttgttttttacttttg 208  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  5875245 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactctagcttgttttttacttttg 5875344  T
Q  209 ttcttagtagct 220  Q
    ||||||||||||    
T  5875345 ttcttagtagct 5875356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 10 - 220
Target Start/End: Complemental strand, 24661251 - 24661041
Alignment:
Q  10 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaagga-aatgaagggaaaaggatgagctac 108  Q
    ||||||||||||||| ||||||||||||||| |||||||| |||||||| |||||||| |||||   |||| | | ||||| ||||||||||||||||||    
T  24661251 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatttaaacgaagaatga-gggaaaaggatgagctac 24661153  T
Q  109 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaacactagcttgttttttacttttg 208  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  24661152 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactctagcttgttttttacttttg 24661053  T
Q  209 ttcttagtagct 220  Q
    ||||| ||||||    
T  24661052 ttcttcgtagct 24661041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 10 - 189
Target Start/End: Original strand, 9992794 - 9992973
Alignment:
Q  10 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaagga-aatgaagggaaaaggatgagctac 108  Q
    ||||||||||||||| |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| | ||||| | ||||||||||||||||    
T  9992794 tggacatcactcctttctatcccgaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaagaagaatga-gagaaaaggatgagctac 9992892  T
Q  109 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaacact 189  Q
    || |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9992893 ttaagaagaaggatgatcatatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaacact 9992973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 10 - 220
Target Start/End: Original strand, 24392956 - 24393167
Alignment:
Q  10 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaagga-aatgaagggaaaaggatgagctac 108  Q
    ||||||||||||||| |||| |||||||||| |||||||| |||||||| |||||||| |||||   |||| | | ||||| ||||||||||||||||||    
T  24392956 tggacatcactcctttctattcagaagaagagtacatcactagggctgctagaattcaggctggatttaaacgaagaatga-gggaaaaggatgagctac 24393054  T
Q  109 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaacactagcttg-ttttttactttt 207  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  24393055 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactctagcttgtttttttactttt 24393154  T
Q  208 gttcttagtagct 220  Q
    |||||| ||||||    
T  24393155 gttcttcgtagct 24393167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 10 - 189
Target Start/End: Original strand, 6499864 - 6500043
Alignment:
Q  10 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaagga-aatgaagggaaaaggatgagctac 108  Q
    ||||||||||||||| ||||| ||||||||| |||||||||||||||||||||||||||||||||| |||||| | ||||| | ||||||||||||||||    
T  6499864 tggacatcactcctttctatcaagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatga-gagaaaaggatgagctac 6499962  T
Q  109 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaacact 189  Q
    ||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||    
T  6499963 ttcagaagaaggatgatcagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcacacccaacact 6500043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 10 - 212
Target Start/End: Complemental strand, 8776040 - 8775839
Alignment:
Q  10 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaagga-aatgaagggaaaaggatgagctac 108  Q
    ||||||||||||||| |||||| |||||||| || |||||||| ||||||||||||||||||||||||  ||| | ||||| ||||||||||||||||||    
T  8776040 tggacatcactcctttctatcctgaagaagagtatatcacaagagctgcaagaattcatgctgggcatgtaagaagaatga-gggaaaaggatgagctac 8775942  T
Q  109 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaacactagcttgttttttacttttg 208  Q
    || ||||||| ||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  8775941 ttaagaagaaagatgaacagatcaagtatctcttagaacagctgtataagcaagcccaaccttagttgcacacccaactctagcttgt-ttttacttttg 8775843  T
Q  209 ttct 212  Q
    ||||    
T  8775842 ttct 8775839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 10 - 212
Target Start/End: Complemental strand, 18485373 - 18485172
Alignment:
Q  10 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaagga-aatgaagggaaaaggatgagctac 108  Q
    ||||||||||||||| |||||| |||||||| || |||||||| ||||||||||||||||||||||||  ||| | ||||| ||||||||||||||||||    
T  18485373 tggacatcactcctttctatcctgaagaagagtatatcacaagagctgcaagaattcatgctgggcatgtaagaagaatga-gggaaaaggatgagctac 18485275  T
Q  109 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaacactagcttgttttttacttttg 208  Q
    || ||||||| ||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  18485274 ttaagaagaaagatgaacagatcaagtatctcttagaacagctgtataagcaagcccaaccttagttgcacacccaactctagcttgt-ttttacttttg 18485176  T
Q  209 ttct 212  Q
    ||||    
T  18485175 ttct 18485172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 10 - 212
Target Start/End: Complemental strand, 38196107 - 38195906
Alignment:
Q  10 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaagga-aatgaagggaaaaggatgagctac 108  Q
    ||||||||||||||| |||||| |||||||| || |||||||| ||||||||||||||||||||||||  ||| | ||||| ||||||||||||||||||    
T  38196107 tggacatcactcctttctatcctgaagaagagtatatcacaagagctgcaagaattcatgctgggcatgtaagaagaatga-gggaaaaggatgagctac 38196009  T
Q  109 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaacactagcttgttttttacttttg 208  Q
    || ||||||| ||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  38196008 ttaagaagaaagatgaacagatcaagtatctcttagaacagctgtataagcaagcccaaccttagttgcacacccaactctagcttgt-ttttacttttg 38195910  T
Q  209 ttct 212  Q
    ||||    
T  38195909 ttct 38195906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 10 - 212
Target Start/End: Complemental strand, 39373437 - 39373236
Alignment:
Q  10 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaagga-aatgaagggaaaaggatgagctac 108  Q
    ||||||||||||||| |||||| |||||||| || |||||||| ||||||||||||||||||||||||  ||| | ||||| ||||||||||||||||||    
T  39373437 tggacatcactcctttctatcctgaagaagagtatatcacaagagctgcaagaattcatgctgggcatgtaagaagaatga-gggaaaaggatgagctac 39373339  T
Q  109 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaacactagcttgttttttacttttg 208  Q
    || ||||||| ||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  39373338 ttaagaagaaagatgaacagatcaagtatctcttagaacagctgtataagcaagcccaaccttagttgcacacccaactctagcttgt-ttttacttttg 39373240  T
Q  209 ttct 212  Q
    ||||    
T  39373239 ttct 39373236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 10 - 212
Target Start/End: Original strand, 28323701 - 28323902
Alignment:
Q  10 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaagga-aatgaagggaaaaggatgagctac 108  Q
    ||||||||||||||| |||||| |||||||| || ||| |||| ||||||||||||||||||||||||  ||| | ||||| ||||||||||||||||||    
T  28323701 tggacatcactcctttctatcctgaagaagagtatatctcaagagctgcaagaattcatgctgggcatgtaagaagaatga-gggaaaaggatgagctac 28323799  T
Q  109 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaacactagcttgttttttacttttg 208  Q
    || ||||||| ||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  28323800 ttaagaagaaagatgaacagatcaagtatctcttagaacagctgtataagcaagcccaaccttagttgcacacccaactctagcttg-tttttacttttg 28323898  T
Q  209 ttct 212  Q
    ||||    
T  28323899 ttct 28323902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 10 - 182
Target Start/End: Original strand, 6219538 - 6219710
Alignment:
Q  10 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaagga-aatgaagggaaaaggatgagctac 108  Q
    ||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||| | |||| || ||||||||||||||||    
T  6219538 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggtataaaagaagaatg-agagaaaaggatgagctac 6219636  T
Q  109 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacc 182  Q
    || || |||||||||| || || ||||||||||| |||||| |||| |||||||||||||||||||||||||||    
T  6219637 ttaagcagaaggatgaacaaattaagtatctcttggaacagatgtacaagcaagcccaaccttagttgcacacc 6219710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 12 - 183
Target Start/End: Original strand, 16390427 - 16390598
Alignment:
Q  12 gacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaagga-aatgaagggaaaaggatgagctactt 110  Q
    ||||||||||||| ||||||||||||||| |||||||||||||| || |||||||||||||||  |||||| | ||||| | ||||||||||||||||||    
T  16390427 gacatcactcctttctatccagaagaagagtacatcacaagggcagccagaattcatgctgggtttaaaagaagaatga-gagaaaaggatgagctactt 16390525  T
Q  111 cagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacaccc 183  Q
    |||||||||||||| || || ||||||||||| |||||| |||||||||||||||||||||||||||||||||    
T  16390526 cagaagaaggatgagcaaattaagtatctcttggaacagatgtataagcaagcccaaccttagttgcacaccc 16390598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 10 - 183
Target Start/End: Complemental strand, 19779773 - 19779600
Alignment:
Q  10 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaagga-aatgaagggaaaaggatgagctac 108  Q
    ||||||||||||||| ||||||||||||||| ||||||| ||||||||||||||||||||||||| ||||||| | ||||| | ||||||||||||||||    
T  19779773 tggacatcactcctttctatccagaagaagagtacatcataagggctgcaagaattcatgctgggtataaaagaagaatga-gagaaaaggatgagctac 19779675  T
Q  109 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacaccc 183  Q
    || ||||||||||||| || || |||||||| || |||||| |||| ||||||||||||||||||||||||||||    
T  19779674 ttaagaagaaggatgagcaaattaagtatcttttggaacagatgtacaagcaagcccaaccttagttgcacaccc 19779600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 10 - 184
Target Start/End: Complemental strand, 37867838 - 37867664
Alignment:
Q  10 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaagga-aatgaagggaaaaggatgagctac 108  Q
    ||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||  |||||| | |||| || ||||||||||||||||    
T  37867838 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggtttaaaagaagaatg-agagaaaaggatgagctac 37867740  T
Q  109 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacaccca 184  Q
    || ||||||||||||| || || |||||||| || ||| || |||| |||||||||||||||||||||||||||||    
T  37867739 ttaagaagaaggatgagcaaattaagtatcttttggaatagatgtacaagcaagcccaaccttagttgcacaccca 37867664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 10 - 184
Target Start/End: Complemental strand, 37876356 - 37876182
Alignment:
Q  10 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaagga-aatgaagggaaaaggatgagctac 108  Q
    ||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||  |||||| | |||| || ||||||||||||||||    
T  37876356 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggtttaaaagaagaatg-agagaaaaggatgagctac 37876258  T
Q  109 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacaccca 184  Q
    || ||||||||||||| || || |||||||| || ||| || |||| |||||||||||||||||||||||||||||    
T  37876257 ttaagaagaaggatgagcaaattaagtatcttttggaatagatgtacaagcaagcccaaccttagttgcacaccca 37876182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 10 - 180
Target Start/End: Original strand, 20682617 - 20682787
Alignment:
Q  10 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaagga-aatgaagggaaaaggatgagctac 108  Q
    ||||||||||||||| |||| |||||||||| ||||||||||||||  ||||||||||||||||| ||||||| | ||||| ||||||||||||||||||    
T  20682617 tggacatcactcctttctatacagaagaagagtacatcacaagggcatcaagaattcatgctgggtataaaagaagaatga-gggaaaaggatgagctac 20682715  T
Q  109 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcaca 180  Q
    |  ||||||||||||| || ||||||||||| || |||||| |||| |||||| ||||||||||||||||||    
T  20682716 tcaagaagaaggatgagcaaatcaagtatctattggaacagatgtacaagcaaacccaaccttagttgcaca 20682787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 100 - 222
Target Start/End: Original strand, 10654248 - 10654369
Alignment:
Q  100 atgagctacttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaacactagcttgtttt 199  Q
    ||||||||||||||||||| |||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||| |||    
T  10654248 atgagctacttcagaagaaagatgatcaaatcaagtatctcttagaatagttgtataagcaagcccaaccttagttgcacacccaactctagcttg-ttt 10654346  T
Q  200 ttacttttgttcttagtagcttt 222  Q
    |||||||||||||  ||||||||    
T  10654347 ttacttttgttctctgtagcttt 10654369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 10 - 180
Target Start/End: Complemental strand, 14466985 - 14466815
Alignment:
Q  10 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaatgaagggaaaaggatgagctact 109  Q
    ||||||||||||||| ||||||||||||||| |||||| |||||||  ||||||||||||||||| | ||||| | ||  ||||||||||||||||||||    
T  14466985 tggacatcactcctttctatccagaagaagagtacatctcaagggcaacaagaattcatgctgggtacaaaagaagattgagggaaaaggatgagctact 14466886  T
Q  110 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcaca 180  Q
      | ||||||||||| || ||||||||||| || |||||| |||| |||||| ||||||||||||||||||    
T  14466885 caaaaagaaggatgagcaaatcaagtatctattggaacagatgtacaagcaaacccaaccttagttgcaca 14466815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 10 - 180
Target Start/End: Complemental strand, 13123059 - 13122889
Alignment:
Q  10 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaatgaagggaaaaggatgagctact 109  Q
    ||||||||||||||| ||||||||||||||| |||||| |||||||  ||||||||||| ||||| | ||||| | ||  ||||||||||||||||||||    
T  13123059 tggacatcactcctttctatccagaagaagagtacatctcaagggcaacaagaattcattctgggtacaaaagaagattgagggaaaaggatgagctact 13122960  T
Q  110 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcaca 180  Q
      | ||||||||||| || ||||||||||| || |||||| |||| |||||| ||||||||||||||||||    
T  13122959 caaaaagaaggatgagcaaatcaagtatctattggaacagatgtacaagcaaacccaaccttagttgcaca 13122889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 10 - 104
Target Start/End: Original strand, 10635920 - 10636014
Alignment:
Q  10 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaatgaagggaaaaggatgag 104  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||   || ||||||||||||    
T  10635920 tggacatcactccttactatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgag 10636014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 17 - 185
Target Start/End: Original strand, 29470675 - 29470843
Alignment:
Q  17 cactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaatgaagggaaaaggatgagctacttcagaag 116  Q
    |||||||| |||||||||||| ||  ||||  ||||| |||| |||||||||||||||   ||||| | |   || | ||||||||| | ||||||||||    
T  29470675 cactcctttctatccagaagatgaggacatttcaaggactgctagaattcatgctgggttgaaaagtagactgagagcaaaggatgaacaacttcagaag 29470774  T
Q  117 aaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaa 185  Q
    |||||||| || || |||||||| || ||||||||||||||||||||| ||||||||||||||||||||    
T  29470775 aaggatgagcaaattaagtatctattggaacagttgtataagcaagccaaaccttagttgcacacccaa 29470843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 201; Significance: 1e-110; HSPs: 16)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 10 - 222
Target Start/End: Original strand, 9907060 - 9907272
Alignment:
Q  10 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaatgaagggaaaaggatgagctact 109  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  9907060 tggacatcactccttactatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 9907159  T
Q  110 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaacactagcttgttttttacttttgt 209  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9907160 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagtaagcccaaccttagttgcacacccaacactagcttgttttttacttttgt 9907259  T
Q  210 tcttagtagcttt 222  Q
    |||||||||||||    
T  9907260 tcttagtagcttt 9907272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 10 - 222
Target Start/End: Original strand, 9772231 - 9772446
Alignment:
Q  10 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaatgaagggaaaaggatgagctact 109  Q
    ||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  9772231 tggacatcactccttactatccagaagaagagtacatcacaagagctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 9772330  T
Q  110 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaacactagcttg---ttttttacttt 206  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   |||||||||||    
T  9772331 tcagaagaaagatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaacactagcttgtttttttttacttt 9772430  T
Q  207 tgttcttagtagcttt 222  Q
    ||||||| ||||||||    
T  9772431 tgttcttcgtagcttt 9772446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 10 - 222
Target Start/End: Complemental strand, 40223651 - 40223439
Alignment:
Q  10 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaagga-aatgaagggaaaaggatgagctac 108  Q
    ||||||||||||||| ||||||||||||||| ||||||||||||||||| |||||||| |||||| ||||||| | ||||| ||||||||||||||||||    
T  40223651 tggacatcactcctttctatccagaagaagagtacatcacaagggctgctagaattcaggctgggtataaaagaagaatga-gggaaaaggatgagctac 40223553  T
Q  109 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaacactagcttgttttttacttttg 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40223552 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaacactagcttgttttttacttttg 40223453  T
Q  209 ttcttagtagcttt 222  Q
    ||||||||||||||    
T  40223452 ttcttagtagcttt 40223439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 10 - 220
Target Start/End: Complemental strand, 43346717 - 43346507
Alignment:
Q  10 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaagga-aatgaagggaaaaggatgagctac 108  Q
    ||||||||||||||| ||||||||||||||| |||||||| |||||||| |||||||| |||||  ||||||| | ||||| ||||||||||||||||||    
T  43346717 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaaagaagaatga-gggaaaaggatgagctac 43346619  T
Q  109 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaacactagcttgttttttacttttg 208  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  43346618 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactctagcttgttttttacttttg 43346519  T
Q  209 ttcttagtagct 220  Q
    ||||||||||||    
T  43346518 ttcttagtagct 43346507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 10 - 220
Target Start/End: Complemental strand, 10268300 - 10268090
Alignment:
Q  10 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaagga-aatgaagggaaaaggatgagctac 108  Q
    ||||||||||||||| ||||||||||||||| |||||||| |||||||| |||||||| |||||  ||||| | | ||||| ||||||||||||||||||    
T  10268300 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaacgaagaatga-gggaaaaggatgagctac 10268202  T
Q  109 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaacactagcttgttttttacttttg 208  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  10268201 ttcagaaaaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactctagcttgttttttacttttg 10268102  T
Q  209 ttcttagtagct 220  Q
    ||||| ||||||    
T  10268101 ttcttcgtagct 10268090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 10 - 220
Target Start/End: Complemental strand, 10278877 - 10278667
Alignment:
Q  10 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaagga-aatgaagggaaaaggatgagctac 108  Q
    ||||||||||||||| ||||||||||||||| |||||||| |||||||| |||||||| |||||  ||||| | | ||||| ||||||||||||||||||    
T  10278877 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaacgaagaatga-gggaaaaggatgagctac 10278779  T
Q  109 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaacactagcttgttttttacttttg 208  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  10278778 ttcagaaaaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactctagcttgttttttacttttg 10278679  T
Q  209 ttcttagtagct 220  Q
    ||||| ||||||    
T  10278678 ttcttcgtagct 10278667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 42 - 222
Target Start/End: Original strand, 34803303 - 34803483
Alignment:
Q  42 tacatcacaagggctgcaagaattcatgctgggcataaaagga-aatgaagggaaaaggatgagctacttcagaagaaggatgatcagatcaagtatctc 140  Q
    ||||||||||||| ||| |||||||| |||||| ||||||| | ||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  34803303 tacatcacaagggttgctagaattcaggctgggtataaaagaagaatga-gggaaaaggatgaactacttcagaagaaggatgatcagatcaagtatctc 34803401  T
Q  141 ttagaacagttgtataagcaagcccaaccttagttgcacacccaacactagcttgttttttacttttgttcttagtagcttt 222  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34803402 ttagaacagttgtataagcaagcccaaccttagttgcacacccaacactagcttgttttttacttttgttcttagtagcttt 34803483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 10 - 220
Target Start/End: Original strand, 11404345 - 11404559
Alignment:
Q  10 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaagga-aatgaagggaaaaggatgagctac 108  Q
    ||||||||||||||| ||||||||||||||| |||||||| |||||||| |||||||| |||||   |||| | | ||||| ||||||||||||||||||    
T  11404345 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatttaaacgaagaatga-gggaaaaggatgagctac 11404443  T
Q  109 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaacactagcttg----ttttttact 204  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    |||||||||    
T  11404444 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactctagcttgttttttttttact 11404543  T
Q  205 tttgttcttagtagct 220  Q
    ||||||||||||||||    
T  11404544 tttgttcttagtagct 11404559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 10 - 212
Target Start/End: Complemental strand, 35254351 - 35254150
Alignment:
Q  10 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaagga-aatgaagggaaaaggatgagctac 108  Q
    ||||||||||||||| |||||| |||||||| || |||||||| ||||||||||||||||||||||||  ||| | ||||| ||||||||||||||||||    
T  35254351 tggacatcactcctttctatcctgaagaagagtatatcacaagagctgcaagaattcatgctgggcatgtaagaagaatga-gggaaaaggatgagctac 35254253  T
Q  109 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaacactagcttgttttttacttttg 208  Q
    || ||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  35254252 ttaagaagaaagatgaacagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactctagcttgt-ttttacttttg 35254154  T
Q  209 ttct 212  Q
    ||||    
T  35254153 ttct 35254150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 10 - 212
Target Start/End: Complemental strand, 35264960 - 35264759
Alignment:
Q  10 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaagga-aatgaagggaaaaggatgagctac 108  Q
    ||||||||||||||| |||||| |||||||| || |||||||| ||||||||||||||||||||||||  ||| | ||||| ||||||||||||||||||    
T  35264960 tggacatcactcctttctatcctgaagaagagtatatcacaagagctgcaagaattcatgctgggcatgtaagaagaatga-gggaaaaggatgagctac 35264862  T
Q  109 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaacactagcttgttttttacttttg 208  Q
    || ||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  35264861 ttaagaagaaagatgaacagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactctagcttgt-ttttacttttg 35264763  T
Q  209 ttct 212  Q
    ||||    
T  35264762 ttct 35264759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 10 - 212
Target Start/End: Complemental strand, 27222738 - 27222537
Alignment:
Q  10 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaagga-aatgaagggaaaaggatgagctac 108  Q
    ||||||||||||||| |||||| |||||||| || |||||||| ||||||||||||||||||||||||  ||| | ||||| ||||||||||||||||||    
T  27222738 tggacatcactcctttctatcctgaagaagagtatatcacaagagctgcaagaattcatgctgggcatgtaagaagaatga-gggaaaaggatgagctac 27222640  T
Q  109 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaacactagcttgttttttacttttg 208  Q
    || ||||||| ||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  27222639 ttaagaagaaagatgaacagatcaagtatctcttagaacagctgtataagcaagcccaaccttagttgcacacccaactctagcttgt-ttttacttttg 27222541  T
Q  209 ttct 212  Q
    ||||    
T  27222540 ttct 27222537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 10 - 182
Target Start/End: Original strand, 24337264 - 24337436
Alignment:
Q  10 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaagga-aatgaagggaaaaggatgagctac 108  Q
    ||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||| | |||| || ||||||||||||||||    
T  24337264 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggtataaaagaagaatg-agagaaaaggatgagctac 24337362  T
Q  109 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacc 182  Q
    |  ||||||||||||| || || |||||||| || |||||| |||| |||||||||||||||||||||||||||    
T  24337363 tcaagaagaaggatgagcaaattaagtatcttttggaacagatgtacaagcaagcccaaccttagttgcacacc 24337436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 10 - 184
Target Start/End: Complemental strand, 29245567 - 29245393
Alignment:
Q  10 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaagga-aatgaagggaaaaggatgagctac 108  Q
    ||||||||||||||| ||||||||||||||| ||||| |||||||||||||||||||||||||||  |||||| | ||||| | ||||||||||||||||    
T  29245567 tggacatcactcctttctatccagaagaagagtacattacaagggctgcaagaattcatgctgggtttaaaagaagaatga-gagaaaaggatgagctac 29245469  T
Q  109 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacaccca 184  Q
    || ||||||||||||| || || |||||||| || |||||| |||| |||||||||||||||||||||||||||||    
T  29245468 ttaagaagaaggatgagcaaattaagtatcttttggaacagatgtacaagcaagcccaaccttagttgcacaccca 29245393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 10 - 184
Target Start/End: Complemental strand, 43084009 - 43083835
Alignment:
Q  10 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaagga-aatgaagggaaaaggatgagctac 108  Q
    ||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||| ||||  |||||| | ||||| | ||||||||||||||||    
T  43084009 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaattcatgttgggtttaaaagaagaatga-gagaaaaggatgagctac 43083911  T
Q  109 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacaccca 184  Q
    || ||||||||||||| || || |||||||| || |||||| |||| |||||||||||||||||||||||||||||    
T  43083910 ttaagaagaaggatgagcaaattaagtatcttttggaacagatgtacaagcaagcccaaccttagttgcacaccca 43083835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 10 - 180
Target Start/End: Original strand, 22959203 - 22959373
Alignment:
Q  10 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaatgaagggaaaaggatgagctact 109  Q
    ||||||||||||||| ||||||||||||||| |||||| |||||||  ||||||||||||||||| | ||||| | ||  |||||||| |||||||||||    
T  22959203 tggacatcactcctttctatccagaagaagagtacatctcaagggcaacaagaattcatgctgggtacaaaagaagattgagggaaaaagatgagctact 22959302  T
Q  110 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcaca 180  Q
      | ||||||||||| || ||||||||||| || |||||| |||| |||||| ||||||||||||||||||    
T  22959303 caaaaagaaggatgagcaaatcaagtatctattggaacagatgtacaagcaaacccaaccttagttgcaca 22959373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 10 - 179
Target Start/End: Complemental strand, 4211254 - 4211085
Alignment:
Q  10 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaagga-aatgaagggaaaaggatgagctac 108  Q
    ||||||||||||||| ||||||||||||||| |||||| |||||||  ||||||||||||||||  | ||||| | ||||| | ||||||||||||||||    
T  4211254 tggacatcactcctttctatccagaagaagagtacatctcaagggcaacaagaattcatgctggatacaaaagaagaatga-gagaaaaggatgagctac 4211156  T
Q  109 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcac 179  Q
    |  | ||||||||||| || ||||||||||| || |||||| |||| |||||| |||||||||||||||||    
T  4211155 tcaaaaagaaggatgagcaaatcaagtatctattggaacagatgtacaagcaaacccaaccttagttgcac 4211085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 197; Significance: 1e-107; HSPs: 15)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 10 - 222
Target Start/End: Complemental strand, 451928 - 451716
Alignment:
Q  10 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaatgaagggaaaaggatgagctact 109  Q
    |||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  451928 tggacatctctccttactatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 451829  T
Q  110 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaacactagcttgttttttacttttgt 209  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  451828 tcagaagaaagatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaacactagcttgttttttacttttgt 451729  T
Q  210 tcttagtagcttt 222  Q
    |||||||||||||    
T  451728 tcttagtagcttt 451716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 10 - 222
Target Start/End: Original strand, 30935979 - 30936191
Alignment:
Q  10 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaatgaagggaaaaggatgagctact 109  Q
    |||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  30935979 tggacatctctccttactatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 30936078  T
Q  110 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaacactagcttgttttttacttttgt 209  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30936079 tcagaagaaagatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaacactagcttgttttttacttttgt 30936178  T
Q  210 tcttagtagcttt 222  Q
    |||||||||||||    
T  30936179 tcttagtagcttt 30936191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 10 - 222
Target Start/End: Complemental strand, 21997768 - 21997556
Alignment:
Q  10 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaatgaagggaaaaggatgagctact 109  Q
    |||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||    
T  21997768 tggacatctctccttactatccagaagaagagtacatcacaagggctgcaagaattcatgttgggcataaaaggaaattaagggaaaaggatgagctact 21997669  T
Q  110 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaacactagcttgttttttacttttgt 209  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21997668 tcagaagaaagatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaacactagcttgttttttacttttgt 21997569  T
Q  210 tcttagtagcttt 222  Q
    |||||||||||||    
T  21997568 tcttagtagcttt 21997556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 10 - 220
Target Start/End: Original strand, 55754716 - 55754926
Alignment:
Q  10 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaagga-aatgaagggaaaaggatgagctac 108  Q
    ||||||||||||||| ||||||||||||||| |||||||| |||||||| |||||||| |||||  ||||||| | ||||| | ||||||||||||||||    
T  55754716 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaaagaagaatga-gagaaaaggatgagctac 55754814  T
Q  109 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaacactagcttgttttttacttttg 208  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  55754815 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactctagcttgttttttacttttg 55754914  T
Q  209 ttcttagtagct 220  Q
    ||||||||||||    
T  55754915 ttcttagtagct 55754926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 10 - 220
Target Start/End: Complemental strand, 36019687 - 36019477
Alignment:
Q  10 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaagga-aatgaagggaaaaggatgagctac 108  Q
    ||||||||||||||| ||||||||||||||| |||||||| |||||||| |||||||| |||||  ||||| | | ||||| ||||||||||||||||||    
T  36019687 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaacgaagaatga-gggaaaaggatgagctac 36019589  T
Q  109 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaacactagcttgttttttacttttg 208  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  36019588 ttcagaagaaggatgatcagatcaagtatctcttagaacaattgtataagcaagcccaaccttagttgcacacccaactctagcttgttttttacttttg 36019489  T
Q  209 ttcttagtagct 220  Q
    ||||| ||||||    
T  36019488 ttcttcgtagct 36019477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 10 - 220
Target Start/End: Original strand, 10750056 - 10750266
Alignment:
Q  10 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaagga-aatgaagggaaaaggatgagctac 108  Q
    ||||||||||||||| ||||||||||||||| |||||||| |||||||| |||||||| |||||   |||| | | ||||| ||||||||||||||||||    
T  10750056 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatttaaacgaagaatga-gggaaaaggatgagctac 10750154  T
Q  109 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaacactagcttgttttttacttttg 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  10750155 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtctaagcaagcccaaccttagttgcacacccaactctagcttgttttttacttttg 10750254  T
Q  209 ttcttagtagct 220  Q
    ||||| ||||||    
T  10750255 ttcttcgtagct 10750266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 10 - 220
Target Start/End: Original strand, 10963825 - 10964035
Alignment:
Q  10 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaagga-aatgaagggaaaaggatgagctac 108  Q
    ||||||||||||||| ||||||||||||||| |||||||| |||||||| |||||||| |||||   |||| | | ||||| ||||||||||||||||||    
T  10963825 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatttaaacgaagaatga-gggaaaaggatgagctac 10963923  T
Q  109 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaacactagcttgttttttacttttg 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  10963924 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtctaagcaagcccaaccttagttgcacacccaactctagcttgttttttacttttg 10964023  T
Q  209 ttcttagtagct 220  Q
    ||||| ||||||    
T  10964024 ttcttcgtagct 10964035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 10 - 226
Target Start/End: Original strand, 18761969 - 18762184
Alignment:
Q  10 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaagga-aatgaagggaaaaggatgagctac 108  Q
    ||||||||||||||| |||||||||||| |||||||||||| ||||||||||||||||||||||||||  ||| | ||||| ||||||||||||||||||    
T  18761969 tggacatcactcctttctatccagaagaggaatacatcacatgggctgcaagaattcatgctgggcatgtaagaagaatga-gggaaaaggatgagctac 18762067  T
Q  109 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaacactagcttgttttttacttttg 208  Q
    || ||||||| ||||| || ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||| |||||||| |||    
T  18762068 ttaagaagaaagatgaacaaatcaagtatctcttagaacagctgtataagcaagcccaaccttagttgcacacccaactctagcttg-tttttactcttg 18762166  T
Q  209 ttcttagtagctttatct 226  Q
    ||||  |||| |||||||    
T  18762167 ttctgtgtagttttatct 18762184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 10 - 212
Target Start/End: Complemental strand, 24641667 - 24641466
Alignment:
Q  10 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaagga-aatgaagggaaaaggatgagctac 108  Q
    ||||||||||||||| |||||| |||||||| || |||||||| ||||||||||||||||||||||||  ||| | ||||| ||||||||||||||||||    
T  24641667 tggacatcactcctttctatcctgaagaagagtatatcacaagagctgcaagaattcatgctgggcatgtaagaagaatga-gggaaaaggatgagctac 24641569  T
Q  109 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaacactagcttgttttttacttttg 208  Q
    || ||||||| ||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  24641568 ttaagaagaaagatgaacagatcaagtatctcttagaacagctgtataagcaagcccaaccttagttgcacacccaactctagcttgt-ttttacttttg 24641470  T
Q  209 ttct 212  Q
    ||||    
T  24641469 ttct 24641466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 10 - 212
Target Start/End: Complemental strand, 27658000 - 27657799
Alignment:
Q  10 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaagga-aatgaagggaaaaggatgagctac 108  Q
    ||||||||||||||| |||||| |||||||| || |||||||| |||||||| |||||||||||||||  ||| | ||||| ||||||||||||||||||    
T  27658000 tggacatcactcctttctatcctgaagaagagtatatcacaagagctgcaaggattcatgctgggcatgtaagaagaatga-gggaaaaggatgagctac 27657902  T
Q  109 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaacactagcttgttttttacttttg 208  Q
    || | ||||| ||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  27657901 ttaaaaagaaagatgaacagatcaagtatctcttagaacagctgtataagcaagcccaaccttagttgcacacccaactctagcttgt-ttttacttttg 27657803  T
Q  209 ttct 212  Q
    ||||    
T  27657802 ttct 27657799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 10 - 184
Target Start/End: Original strand, 24026926 - 24027100
Alignment:
Q  10 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaagga-aatgaagggaaaaggatgagctac 108  Q
    ||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||| | ||||| ||||||||||||||||||    
T  24026926 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggtataaaagaagaatga-gggaaaaggatgagctac 24027024  T
Q  109 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacaccca 184  Q
    |  ||||||||||||| || ||||||||||| || |||||| |||| |||||||||||||||||||||||||||||    
T  24027025 tcaagaagaaggatgagcaaatcaagtatcttttggaacagatgtacaagcaagcccaaccttagttgcacaccca 24027100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 10 - 182
Target Start/End: Complemental strand, 17919466 - 17919294
Alignment:
Q  10 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaagga-aatgaagggaaaaggatgagctac 108  Q
    ||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||| | |||| |||||||||||||||||||    
T  17919466 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggtataaaagaagaatg-agggaaaaggatgagctac 17919368  T
Q  109 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacc 182  Q
    |  ||||||||||||| || ||||||||||| || |||||| |||| ||| |||||||||||||||||||||||    
T  17919367 tcaagaagaaggatgagcaaatcaagtatcttttggaacagatgtacaagaaagcccaaccttagttgcacacc 17919294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 10 - 184
Target Start/End: Original strand, 19953843 - 19954017
Alignment:
Q  10 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaatgaagggaaaaggatgagctact 109  Q
    ||||||||||||||| ||| ||||||||| | ||||||||||||||||||||||||||||||||| ||||||| | |  |||||||||||||||||||||    
T  19953843 tggacatcactcctttctacccagaagaatagtacatcacaagggctgcaagaattcatgctgggtataaaagaagaataagggaaaaggatgagctact 19953942  T
Q  110 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacaccca 184  Q
      ||||||||||||| || || |||||||| || |||||| |||| ||||||| |||||||||||||||||||||    
T  19953943 caagaagaaggatgagcaaattaagtatcttttggaacagatgtacaagcaagtccaaccttagttgcacaccca 19954017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 10 - 180
Target Start/End: Complemental strand, 16257282 - 16257112
Alignment:
Q  10 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaatgaagggaaaaggatgagctact 109  Q
    ||||||||||||||| ||||||||||||||| |||||| |||||||  ||||||||||||||||| | ||||| | ||  |||||||| |||||||||||    
T  16257282 tggacatcactcctttctatccagaagaagagtacatctcaagggcaacaagaattcatgctgggtacaaaagaagattgagggaaaaagatgagctact 16257183  T
Q  110 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcaca 180  Q
      | ||||||||||| || ||||||||||| || |||||| |||| |||||| ||||||||||||||||||    
T  16257182 caaaaagaaggatgagcaaatcaagtatctattggaacagatgtacaagcaaacccaaccttagttgcaca 16257112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 12 - 184
Target Start/End: Original strand, 40469482 - 40469654
Alignment:
Q  12 gacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaagga-aatgaagggaaaaggatgagctactt 110  Q
    |||| |||||| | ||||| ||||||||| ||||| ||||||||||| ||||||||||||||   |||||| | ||||| | ||||||||||||||||||    
T  40469482 gacaacactcccttctatctagaagaagagtacattacaagggctgctagaattcatgctggatttaaaagaagaatga-gagaaaaggatgagctactt 40469580  T
Q  111 cagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacaccca 184  Q
    |||||||||||||| || || ||||| || || |||||  |||||||||||||| |||||||||||||||||||    
T  40469581 cagaagaaggatgagcaaattaagtaccttttggaacaaatgtataagcaagccaaaccttagttgcacaccca 40469654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 197; Significance: 1e-107; HSPs: 17)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 10 - 222
Target Start/End: Complemental strand, 12731807 - 12731595
Alignment:
Q  10 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaatgaagggaaaaggatgagctact 109  Q
    |||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  12731807 tggacatctctccttactatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 12731708  T
Q  110 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaacactagcttgttttttacttttgt 209  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12731707 tcagaagaaagatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaacactagcttgttttttacttttgt 12731608  T
Q  210 tcttagtagcttt 222  Q
    |||||||||||||    
T  12731607 tcttagtagcttt 12731595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 10 - 222
Target Start/End: Complemental strand, 12742400 - 12742188
Alignment:
Q  10 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaatgaagggaaaaggatgagctact 109  Q
    |||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  12742400 tggacatctctccttactatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 12742301  T
Q  110 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaacactagcttgttttttacttttgt 209  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12742300 tcagaagaaagatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaacactagcttgttttttacttttgt 12742201  T
Q  210 tcttagtagcttt 222  Q
    |||||||||||||    
T  12742200 tcttagtagcttt 12742188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 10 - 220
Target Start/End: Complemental strand, 7508597 - 7508387
Alignment:
Q  10 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaagga-aatgaagggaaaaggatgagctac 108  Q
    ||||||||||||||| ||||||||||||||| |||||||| |||||||| |||||||| |||||  ||||| | | ||||| ||||||||||||||||||    
T  7508597 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaacgaagaatga-gggaaaaggatgagctac 7508499  T
Q  109 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaacactagcttgttttttacttttg 208  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  7508498 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactctagcttgttttttacttttg 7508399  T
Q  209 ttcttagtagct 220  Q
    ||||| ||||||    
T  7508398 ttcttcgtagct 7508387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 10 - 220
Target Start/End: Original strand, 36245931 - 36246141
Alignment:
Q  10 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaagga-aatgaagggaaaaggatgagctac 108  Q
    ||||||||||||||| ||||||| ||||||| |||||||| |||||||| |||||||| |||||  ||||||| | ||||| ||||||||||||||||||    
T  36245931 tggacatcactcctttctatccataagaagagtacatcactagggctgctagaattcaggctggatataaaagaagaatga-gggaaaaggatgagctac 36246029  T
Q  109 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaacactagcttgttttttacttttg 208  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  36246030 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactctagcttgttttttacttttg 36246129  T
Q  209 ttcttagtagct 220  Q
    ||||| ||||||    
T  36246130 ttcttcgtagct 36246141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 10 - 220
Target Start/End: Complemental strand, 38096383 - 38096173
Alignment:
Q  10 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaagga-aatgaagggaaaaggatgagctac 108  Q
    ||||||||||||||| ||||||||||||||| |||||||| |||||||| |||||||| |||||  ||||||| | ||||| | ||||||||||||||||    
T  38096383 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaaagaagaatga-gagaaaaggatgagctac 38096285  T
Q  109 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaacactagcttgttttttacttttg 208  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  38096284 ttcaaaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactctagcttgttttttacttttg 38096185  T
Q  209 ttcttagtagct 220  Q
    ||||||||||||    
T  38096184 ttcttagtagct 38096173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 10 - 220
Target Start/End: Original strand, 51655375 - 51655585
Alignment:
Q  10 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaagga-aatgaagggaaaaggatgagctac 108  Q
    ||||||||||||||| ||||||||||||||| |||||||| |||||||| |||||||| |||||   |||| | | ||||| ||||||||||||||||||    
T  51655375 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatttaaacgaagaatga-gggaaaaggatgagctac 51655473  T
Q  109 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaacactagcttgttttttacttttg 208  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  51655474 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactctagcttgttttttacttttg 51655573  T
Q  209 ttcttagtagct 220  Q
    ||||| ||||||    
T  51655574 ttcttcgtagct 51655585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 10 - 212
Target Start/End: Original strand, 35400043 - 35400244
Alignment:
Q  10 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaagga-aatgaagggaaaaggatgagctac 108  Q
    ||||||||||||||| |||||| |||||||| || |||||||| ||||||||||||||||||||||||  ||| | ||||| ||||||||||||||||||    
T  35400043 tggacatcactcctttctatcctgaagaagagtatatcacaagagctgcaagaattcatgctgggcatgtaagaagaatga-gggaaaaggatgagctac 35400141  T
Q  109 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaacactagcttgttttttacttttg 208  Q
    || ||||||| ||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  35400142 ttaagaagaaagatgaacagatcaagtatctcttagaacagctgtataagcaagcccaaccttagttgcacacccaactctagcttg-tttttacttttg 35400240  T
Q  209 ttct 212  Q
    ||||    
T  35400241 ttct 35400244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 10 - 212
Target Start/End: Original strand, 35647568 - 35647769
Alignment:
Q  10 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaagga-aatgaagggaaaaggatgagctac 108  Q
    ||||||||||||||| |||||| |||||||| || |||||||| ||||||||||||||||||||||||  ||| | ||||| ||||||||||||||||||    
T  35647568 tggacatcactcctttctatcctgaagaagagtatatcacaagagctgcaagaattcatgctgggcatgtaagaagaatga-gggaaaaggatgagctac 35647666  T
Q  109 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaacactagcttgttttttacttttg 208  Q
    || ||||||| ||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  35647667 ttaagaagaaagatgaacagatcaagtatctcttagaacagctgtataagcaagcccaaccttagttgcacacccaactctagcttg-tttttacttttg 35647765  T
Q  209 ttct 212  Q
    ||||    
T  35647766 ttct 35647769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 10 - 212
Target Start/End: Original strand, 47617437 - 47617637
Alignment:
Q  10 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaagga-aatgaagggaaaaggatgagctac 108  Q
    ||||||||||||||| |||||| |||||||| || |||||||| ||||||||||||||||||||||||  ||| | ||||| ||||||||||||||||||    
T  47617437 tggacatcactcctttctatcctgaagaagagtatatcacaagagctgcaagaattcatgctgggcatgtaagaagaatga-gggaaaaggatgagctac 47617535  T
Q  109 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaacactagcttgttttttacttttg 208  Q
    || ||||||| ||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||  |||||||||||    
T  47617536 ttaagaagaaagatgaacagatcaagtatctcttagaacagctgtataagcaagcccaaccttagttgcacacccaactctagcttg--ttttacttttg 47617633  T
Q  209 ttct 212  Q
    ||||    
T  47617634 ttct 47617637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 10 - 212
Target Start/End: Complemental strand, 5834524 - 5834323
Alignment:
Q  10 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaagga-aatgaagggaaaaggatgagctac 108  Q
    ||||||||||||||| |||||| |||||||| || |||||||| |||||||| |||||||||||||||  ||| | ||||| ||||||||||||||||||    
T  5834524 tggacatcactcctttctatcctgaagaagagtatatcacaagagctgcaaggattcatgctgggcatgtaagaagaatga-gggaaaaggatgagctac 5834426  T
Q  109 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaacactagcttgttttttacttttg 208  Q
    || ||||||| ||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  5834425 ttaagaagaaagatgaacagatcaagtatctcttagaacagctgtataagcaagcccaaccttagttgcacacccaactctagcttgt-ttttacttttg 5834327  T
Q  209 ttct 212  Q
    ||||    
T  5834326 ttct 5834323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 10 - 212
Target Start/End: Complemental strand, 3172920 - 3172719
Alignment:
Q  10 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaagga-aatgaagggaaaaggatgagctac 108  Q
    ||||||||||||||| |||||| |||||||| || |||||||| |||||||| |||||||||||||||  ||| | ||||| ||||||||||||||||||    
T  3172920 tggacatcactcctttctatcctgaagaagagtatatcacaagagctgcaaggattcatgctgggcatgtaagaagaatga-gggaaaaggatgagctac 3172822  T
Q  109 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaacactagcttgttttttacttttg 208  Q
    || | ||||| ||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  3172821 ttaaaaagaaagatgaacagatcaagtatctcttagaacagctgtataagcaagcccaaccttagttgcacacccaactctagcttgt-ttttacttttg 3172723  T
Q  209 ttct 212  Q
    ||||    
T  3172722 ttct 3172719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 10 - 184
Target Start/End: Complemental strand, 4168575 - 4168401
Alignment:
Q  10 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaagga-aatgaagggaaaaggatgagctac 108  Q
    ||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||| | |||| || ||||||||||||||||    
T  4168575 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggtataaaagaagaatg-agagaaaaggatgagctac 4168477  T
Q  109 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacaccca 184  Q
    || ||||||||||||| || || |||||||| || |||||| |||| |||||||||||||||||||||||||||||    
T  4168476 ttaagaagaaggatgagcaaattaagtatcttttggaacagatgtacaagcaagcccaaccttagttgcacaccca 4168401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 10 - 184
Target Start/End: Complemental strand, 19180259 - 19180085
Alignment:
Q  10 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaagga-aatgaagggaaaaggatgagctac 108  Q
    ||||||||||||||| ||||| ||||||||| || || |||||||||||||||||||||||||||  |||||| | ||||| | ||||||||||||||||    
T  19180259 tggacatcactcctttctatctagaagaagagtatattacaagggctgcaagaattcatgctgggtttaaaagaagaatga-gagaaaaggatgagctac 19180161  T
Q  109 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacaccca 184  Q
    || ||||||||||||| || || ||||||||||| |||||| ||||||||||||||||||||||||||||||||||    
T  19180160 ttaagaagaaggatgagcaaattaagtatctcttggaacagatgtataagcaagcccaaccttagttgcacaccca 19180085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 10 - 182
Target Start/End: Original strand, 5649257 - 5649429
Alignment:
Q  10 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaagga-aatgaagggaaaaggatgagctac 108  Q
    ||||||||||||||| ||| ||||||||||| ||||||||||||||||||||||||||||||||| ||||||| | |||| || ||||||||||||||||    
T  5649257 tggacatcactcctttctacccagaagaagagtacatcacaagggctgcaagaattcatgctgggtataaaagaagaatg-agagaaaaggatgagctac 5649355  T
Q  109 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacc 182  Q
    |  | ||||||||||| ||||| |||||||| || |||||| |||| |||||||||||||||||||||||||||    
T  5649356 tcaataagaaggatgagcagattaagtatcttttggaacagatgtacaagcaagcccaaccttagttgcacacc 5649429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 10 - 182
Target Start/End: Complemental strand, 21864996 - 21864824
Alignment:
Q  10 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaagga-aatgaagggaaaaggatgagctac 108  Q
    ||||||||||||||| ||||||||||||||| ||||||||||||||  ||||||||||||||||| ||||||| | ||||| ||||||||||||||||||    
T  21864996 tggacatcactcctttctatccagaagaagagtacatcacaagggcaacaagaattcatgctgggtataaaagaagaatga-gggaaaaggatgagctac 21864898  T
Q  109 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacc 182  Q
    |  | ||||||||||| || ||||||||||| || |||||| |||| |||||| ||||||||||||||||||||    
T  21864897 tcaaaaagaaggatgagcaaatcaagtatctattggaacagatgtacaagcaaacccaaccttagttgcacacc 21864824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 10 - 180
Target Start/End: Original strand, 12622677 - 12622847
Alignment:
Q  10 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaagga-aatgaagggaaaaggatgagctac 108  Q
    ||||||||||||||| ||||||||||||||| |||||| |||||||  ||||||||||||||||  | ||||| | ||||| ||||||||||||||||||    
T  12622677 tggacatcactcctttctatccagaagaagagtacatctcaagggcaacaagaattcatgctggatacaaaagaagaatga-gggaaaaggatgagctac 12622775  T
Q  109 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcaca 180  Q
    |  | |||||||| || || ||||||||||| || |||||| |||| |||||| ||||||||||||||||||    
T  12622776 tcaaaaagaaggacgagcaaatcaagtatctattggaacagatgtacaagcaaacccaaccttagttgcaca 12622847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 17 - 185
Target Start/End: Original strand, 153158 - 153326
Alignment:
Q  17 cactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaatgaagggaaaaggatgagctacttcagaag 116  Q
    |||||||| |||||||||||| || |||||  ||||| |||| |||||||||||||||   ||||| | |   || | |||| |||| | ||||||||||    
T  153158 cactcctttctatccagaagatgagtacatttcaaggactgctagaattcatgctgggttgaaaagtagactgagagcaaagaatgaacaacttcagaag 153257  T
Q  117 aaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaa 185  Q
    |||||||| || || |||||||| || ||||||||||||||||||||| ||||||||||||||||||||    
T  153258 aaggatgagcaaattaagtatctattggaacagttgtataagcaagccaaaccttagttgcacacccaa 153326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 193; Significance: 1e-105; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 10 - 222
Target Start/End: Complemental strand, 15994565 - 15994353
Alignment:
Q  10 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaatgaagggaaaaggatgagctact 109  Q
    |||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  15994565 tggacatctctccttactatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaatgatgagctact 15994466  T
Q  110 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaacactagcttgttttttacttttgt 209  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15994465 tcagaagaaagatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaacactagcttgttttttacttttgt 15994366  T
Q  210 tcttagtagcttt 222  Q
    |||||||||||||    
T  15994365 tcttagtagcttt 15994353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 10 - 222
Target Start/End: Original strand, 31842987 - 31843199
Alignment:
Q  10 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaatgaagggaaaaggatgagctact 109  Q
    ||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  31842987 tggacatcactccttactatccagaagaagagtacatcacaagagctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 31843086  T
Q  110 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaacactagcttgttttttacttttgt 209  Q
    ||||||||| |||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31843087 tcagaagaaagatgatcagatcaagtatttcttagaatagttgtataagcaagcccaaccttagttgcacacccaacactagcttgttttttacttttgt 31843186  T
Q  210 tcttagtagcttt 222  Q
    |||||||||||||    
T  31843187 tcttagtagcttt 31843199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 10 - 220
Target Start/End: Original strand, 23371531 - 23371741
Alignment:
Q  10 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaagga-aatgaagggaaaaggatgagctac 108  Q
    ||||||||||||||| ||||||||||||||| |||||||| |||||||| |||||||| |||||  ||||||| | ||||| ||||||||||||||||||    
T  23371531 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaaagaagaatga-gggaaaaggatgagctac 23371629  T
Q  109 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaacactagcttgttttttacttttg 208  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  23371630 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactctagcttgttttttacttttg 23371729  T
Q  209 ttcttagtagct 220  Q
    ||||||||||||    
T  23371730 ttcttagtagct 23371741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 10 - 220
Target Start/End: Original strand, 23706378 - 23706588
Alignment:
Q  10 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaagga-aatgaagggaaaaggatgagctac 108  Q
    ||||||||||||||| ||||||||||||||| |||||||| |||||||| |||||||| |||||  ||||||| | ||||| ||||||||||||||||||    
T  23706378 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaaagaagaatga-gggaaaaggatgagctac 23706476  T
Q  109 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaacactagcttgttttttacttttg 208  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  23706477 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactctagcttgttttttacttttg 23706576  T
Q  209 ttcttagtagct 220  Q
    ||||||||||||    
T  23706577 ttcttagtagct 23706588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 10 - 220
Target Start/End: Complemental strand, 36583781 - 36583571
Alignment:
Q  10 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaagga-aatgaagggaaaaggatgagctac 108  Q
    ||||||||||||||| ||||||||||||||| |||||||| |||||||| |||||||| |||||  ||||||| | ||||| ||||||||||||||||||    
T  36583781 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaaagaagaatga-gggaaaaggatgagctac 36583683  T
Q  109 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaacactagcttgttttttacttttg 208  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  36583682 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactctagcttgttttttacttttg 36583583  T
Q  209 ttcttagtagct 220  Q
    ||||||||||||    
T  36583582 ttcttagtagct 36583571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 10 - 220
Target Start/End: Original strand, 42052390 - 42052600
Alignment:
Q  10 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaagga-aatgaagggaaaaggatgagctac 108  Q
    ||||||||||||||| ||||||||||||||| |||||||| |||||||| |||||||| |||||  ||||||| | ||||| ||||||||||||||||||    
T  42052390 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaaagaagaatga-gggaaaaggatgagctac 42052488  T
Q  109 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaacactagcttgttttttacttttg 208  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  42052489 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactctagcttgttttttacttttg 42052588  T
Q  209 ttcttagtagct 220  Q
    ||||||||||||    
T  42052589 ttcttagtagct 42052600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 10 - 220
Target Start/End: Original strand, 9345562 - 9345772
Alignment:
Q  10 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaagga-aatgaagggaaaaggatgagctac 108  Q
    ||||||||||||||| ||||||||||||||| |||||||| |||||||| |||||||| |||||  ||||||| | ||||| ||||||||||||||||||    
T  9345562 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaaagaagaatga-gggaaaaggatgagctac 9345660  T
Q  109 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaacactagcttgttttttacttttg 208  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  9345661 tttagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactctagcttgttttttacttttg 9345760  T
Q  209 ttcttagtagct 220  Q
    ||||||||||||    
T  9345761 ttcttagtagct 9345772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 10 - 220
Target Start/End: Original strand, 15768362 - 15768572
Alignment:
Q  10 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaagga-aatgaagggaaaaggatgagctac 108  Q
    ||||||||||||||| ||||||||||||||| |||||||| |||||||| |||||||| |||||  ||||||| | ||||| | ||||||||||||||||    
T  15768362 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaaagaagaatga-gagaaaaggatgagctac 15768460  T
Q  109 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaacactagcttgttttttacttttg 208  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  15768461 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactctagcttgttttttacttttg 15768560  T
Q  209 ttcttagtagct 220  Q
    ||||||||||||    
T  15768561 ttcttagtagct 15768572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 10 - 220
Target Start/End: Complemental strand, 24589336 - 24589126
Alignment:
Q  10 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaagga-aatgaagggaaaaggatgagctac 108  Q
    ||||||||||||||| ||||||||||||||| |||||||| |||||||| |||||||| |||||  ||||||| | ||||| || |||||||||||||||    
T  24589336 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaaagaagaatga-ggtaaaaggatgagctac 24589238  T
Q  109 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaacactagcttgttttttacttttg 208  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  24589237 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactctagcttgttttttacttttg 24589138  T
Q  209 ttcttagtagct 220  Q
    ||||||||||||    
T  24589137 ttcttagtagct 24589126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 10 - 220
Target Start/End: Complemental strand, 30228728 - 30228518
Alignment:
Q  10 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaagga-aatgaagggaaaaggatgagctac 108  Q
    ||||||| ||||||| ||||||||||||||| |||||||| |||||||| |||||||| |||||  ||||||| | ||||| ||||||||||||||||||    
T  30228728 tggacattactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaaagaagaatga-gggaaaaggatgagctac 30228630  T
Q  109 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaacactagcttgttttttacttttg 208  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  30228629 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactctagcttgttttttacttttg 30228530  T
Q  209 ttcttagtagct 220  Q
    ||||||||||||    
T  30228529 ttcttagtagct 30228518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 10 - 220
Target Start/End: Complemental strand, 37731234 - 37731024
Alignment:
Q  10 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaagga-aatgaagggaaaaggatgagctac 108  Q
    ||||||||||||||| ||||||||||||||| |||||||| |||||||| |||||||| |||||  ||||||| | ||||| | ||||||||||||||||    
T  37731234 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaaagaagaatga-gagaaaaggatgagctac 37731136  T
Q  109 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaacactagcttgttttttacttttg 208  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  37731135 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactctagcttgttttttacttttg 37731036  T
Q  209 ttcttagtagct 220  Q
    ||||||||||||    
T  37731035 ttcttagtagct 37731024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 10 - 220
Target Start/End: Original strand, 17616641 - 17616851
Alignment:
Q  10 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaagga-aatgaagggaaaaggatgagctac 108  Q
    ||||||||||||||| ||||||||||||||| |||||||| |||||||| |||||||| |||||  | ||||| | ||||| | ||||||||||||||||    
T  17616641 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatacaaaagaagaatga-gagaaaaggatgagctac 17616739  T
Q  109 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaacactagcttgttttttacttttg 208  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  17616740 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactctagcttgttttttacttttg 17616839  T
Q  209 ttcttagtagct 220  Q
    ||||||||||||    
T  17616840 ttcttagtagct 17616851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 10 - 220
Target Start/End: Original strand, 17728498 - 17728708
Alignment:
Q  10 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaagga-aatgaagggaaaaggatgagctac 108  Q
    ||||||||||||||| ||||||||||||||| |||||||| |||||||| |||||||| |||||  | ||||| | ||||| | ||||||||||||||||    
T  17728498 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatacaaaagaagaatga-gagaaaaggatgagctac 17728596  T
Q  109 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaacactagcttgttttttacttttg 208  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  17728597 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactctagcttgttttttacttttg 17728696  T
Q  209 ttcttagtagct 220  Q
    ||||||||||||    
T  17728697 ttcttagtagct 17728708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 10 - 220
Target Start/End: Original strand, 31358115 - 31358325
Alignment:
Q  10 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaagga-aatgaagggaaaaggatgagctac 108  Q
    ||||||||||||||| ||||||||||||||| |||||||| |||||||| |||||||| |||||  | ||||| | ||||| | ||||||||||||||||    
T  31358115 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatacaaaagaagaatga-gagaaaaggatgagctac 31358213  T
Q  109 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaacactagcttgttttttacttttg 208  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  31358214 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactctagcttgttttttacttttg 31358313  T
Q  209 ttcttagtagct 220  Q
    ||||||||||||    
T  31358314 ttcttagtagct 31358325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 10 - 220
Target Start/End: Original strand, 6985320 - 6985530
Alignment:
Q  10 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaagga-aatgaagggaaaaggatgagctac 108  Q
    ||||||||||||||| ||||||||||||||| |||||||| |||||||| |||||||| |||||   |||| | | ||||| ||||||||||||||||||    
T  6985320 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatttaaacgaagaatga-gggaaaaggatgagctac 6985418  T
Q  109 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaacactagcttgttttttacttttg 208  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  6985419 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactctagcttgttttttacttttg 6985518  T
Q  209 ttcttagtagct 220  Q
    ||||| ||||||    
T  6985519 ttcttcgtagct 6985530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 10 - 220
Target Start/End: Original strand, 14039619 - 14039829
Alignment:
Q  10 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaagga-aatgaagggaaaaggatgagctac 108  Q
    ||||||||||||||| ||||||||||||||| |||||||| |||||||| |||||||| |||||   |||| | | ||||| ||||||||||||||||||    
T  14039619 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatttaaacgaagaatga-gggaaaaggatgagctac 14039717  T
Q  109 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaacactagcttgttttttacttttg 208  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  14039718 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactctagcttgttttttacttttg 14039817  T
Q  209 ttcttagtagct 220  Q
    ||||| ||||||    
T  14039818 ttcttcgtagct 14039829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 10 - 220
Target Start/End: Complemental strand, 14448308 - 14448098
Alignment:
Q  10 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaagga-aatgaagggaaaaggatgagctac 108  Q
    ||||||||||||||| ||||||||||||||| |||||||| |||||||| |||||||| |||||   |||| | | ||||| ||||||||||||||||||    
T  14448308 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatttaaacgaagaatga-gggaaaaggatgagctac 14448210  T
Q  109 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaacactagcttgttttttacttttg 208  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  14448209 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactctagcttgttttttacttttg 14448110  T
Q  209 ttcttagtagct 220  Q
    |||| |||||||    
T  14448109 ttctcagtagct 14448098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 10 - 220
Target Start/End: Complemental strand, 14559340 - 14559130
Alignment:
Q  10 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaagga-aatgaagggaaaaggatgagctac 108  Q
    ||||||||||||||| ||||||||||||||| |||||||| |||||||| |||||||| |||||   |||| | | ||||| ||||||||||||||||||    
T  14559340 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatttaaacgaagaatga-gggaaaaggatgagctac 14559242  T
Q  109 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaacactagcttgttttttacttttg 208  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  14559241 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactctagcttgttttttacttttg 14559142  T
Q  209 ttcttagtagct 220  Q
    |||| |||||||    
T  14559141 ttctcagtagct 14559130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 10 - 220
Target Start/End: Original strand, 22685025 - 22685235
Alignment:
Q  10 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaagga-aatgaagggaaaaggatgagctac 108  Q
    ||||||||||||||| ||||||||||||||| |||||||| |||||||| |||||||| |||||   |||| | | ||||| ||||||||||||||||||    
T  22685025 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatttaaacgaagaatga-gggaaaaggatgagctac 22685123  T
Q  109 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaacactagcttgttttttacttttg 208  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  22685124 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactctagcttgttttttacttttg 22685223  T
Q  209 ttcttagtagct 220  Q
    ||||| ||||||    
T  22685224 ttcttcgtagct 22685235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 10 - 220
Target Start/End: Original strand, 23305868 - 23306078
Alignment:
Q  10 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaagga-aatgaagggaaaaggatgagctac 108  Q
    ||||||||||||||| ||||||||||||||| |||||||| |||||||| |||||||| |||||   |||| | | ||||| ||||||||||||||||||    
T  23305868 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatttaaacgaagaatga-gggaaaaggatgagctac 23305966  T
Q  109 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaacactagcttgttttttacttttg 208  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  23305967 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactctagcttgttttttacttttg 23306066  T
Q  209 ttcttagtagct 220  Q
    ||||| ||||||    
T  23306067 ttcttcgtagct 23306078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 10 - 220
Target Start/End: Complemental strand, 24818123 - 24817913
Alignment:
Q  10 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaagga-aatgaagggaaaaggatgagctac 108  Q
    ||||||||| ||||| ||||||||||||||| |||||||| |||||||| |||||||| |||||  ||||| | | ||||| ||||||||||||||||||    
T  24818123 tggacatcaatcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaacgaagaatga-gggaaaaggatgagctac 24818025  T
Q  109 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaacactagcttgttttttacttttg 208  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  24818024 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactctagcttgttttttacttttg 24817925  T
Q  209 ttcttagtagct 220  Q
    ||||| ||||||    
T  24817924 ttcttcgtagct 24817913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 10 - 220
Target Start/End: Original strand, 27469583 - 27469793
Alignment:
Q  10 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaagga-aatgaagggaaaaggatgagctac 108  Q
    ||||||||||||||| ||||||||||||||| |||||||| |||||||| |||||||| |||||   |||| | | ||||| ||||||||||||||||||    
T  27469583 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatttaaacgaagaatga-gggaaaaggatgagctac 27469681  T
Q  109 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaacactagcttgttttttacttttg 208  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  27469682 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactctagcttgttttttacttttg 27469781  T
Q  209 ttcttagtagct 220  Q
    ||||| ||||||    
T  27469782 ttcttcgtagct 27469793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 10 - 220
Target Start/End: Complemental strand, 27043491 - 27043281
Alignment:
Q  10 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaagga-aatgaagggaaaaggatgagctac 108  Q
    ||||||||||||||| ||||||||||||||| |||||||| |||||||| |||||||| |||||   |||| | | ||||| ||||||||||||||||||    
T  27043491 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatttaaacgaagaatga-gggaaaaggatgagctac 27043393  T
Q  109 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaacactagcttgttttttacttttg 208  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | | |||||||||||||||||    
T  27043392 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactccaacttgttttttacttttg 27043293  T
Q  209 ttcttagtagct 220  Q
    ||||||||||||    
T  27043292 ttcttagtagct 27043281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 10 - 220
Target Start/End: Complemental strand, 39492169 - 39491959
Alignment:
Q  10 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaagga-aatgaagggaaaaggatgagctac 108  Q
    ||||||||||||||| ||||||||||||||| |||||||| |||||||| |||||||| |||||   |||| | | ||||| || |||||||||||||||    
T  39492169 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatttaaacgaagaatga-ggaaaaaggatgagctac 39492071  T
Q  109 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaacactagcttgttttttacttttg 208  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  39492070 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactctagcttgttttttacttttg 39491971  T
Q  209 ttcttagtagct 220  Q
    ||||| ||||||    
T  39491970 ttcttcgtagct 39491959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 10 - 212
Target Start/End: Original strand, 35225084 - 35225285
Alignment:
Q  10 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaagga-aatgaagggaaaaggatgagctac 108  Q
    ||||||||||||||| |||||| |||||||| || |||||||| |||||||| |||||||||||||||  ||| | ||||| ||||||||||||||||||    
T  35225084 tggacatcactcctttctatcctgaagaagagtatatcacaagagctgcaaggattcatgctgggcatgtaagaagaatga-gggaaaaggatgagctac 35225182  T
Q  109 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaacactagcttgttttttacttttg 208  Q
    || ||||||| ||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  35225183 ttaagaagaaagatgaacagatcaagtatctcttagaacagctgtataagcaagcccaaccttagttgcacacccaactctagcttg-tttttacttttg 35225281  T
Q  209 ttct 212  Q
    ||||    
T  35225282 ttct 35225285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 10 - 182
Target Start/End: Original strand, 40399989 - 40400161
Alignment:
Q  10 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaagga-aatgaagggaaaaggatgagctac 108  Q
    ||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||| | |||| || ||||||||||||||||    
T  40399989 tggacatcactcctttctatccagaagaagaatacattacaagggctgcaagaattcatgctgggtataaaagaagaatg-agagaaaaggatgagctac 40400087  T
Q  109 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacc 182  Q
    || ||||||||||||| || || |||||||| || |||||| |||| |||||||||||||| ||||||||||||    
T  40400088 ttaagaagaaggatgagcaaattaagtatcttttggaacagatgtacaagcaagcccaaccctagttgcacacc 40400161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 10 - 184
Target Start/End: Complemental strand, 5291849 - 5291675
Alignment:
Q  10 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaagga-aatgaagggaaaaggatgagctac 108  Q
    ||||||||||||||| ||||||||||||||| ||||| | |||||||||||||||||||||||||  |||||| | ||||| | ||||||||||||||||    
T  5291849 tggacatcactcctttctatccagaagaagagtacattataagggctgcaagaattcatgctgggtttaaaagaagaatga-gagaaaaggatgagctac 5291751  T
Q  109 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacaccca 184  Q
    || ||||||||||||| || || ||||||||||| ||| || ||||||||||||||||||||||||||||||||||    
T  5291750 ttaagaagaaggatgagcaaattaagtatctcttggaatagatgtataagcaagcccaaccttagttgcacaccca 5291675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 10 - 184
Target Start/End: Complemental strand, 27604728 - 27604554
Alignment:
Q  10 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaagga-aatgaagggaaaaggatgagctac 108  Q
    ||||||||||||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||  |||||| | ||||| | ||||||||||||||||    
T  27604728 tggacatcactcctttctatccagaagaagagtacatcacaaggactgcaagaattcatgctgggtttaaaagaagaatga-gagaaaaggatgagctac 27604630  T
Q  109 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacaccca 184  Q
    || ||||||||||||| || || |||||||| || |||||| |||| |||||||||||||||||||||||||||||    
T  27604629 ttaagaagaaggatgagcaaattaagtatcttttggaacagatgtacaagcaagcccaaccttagttgcacaccca 27604554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 14 - 187
Target Start/End: Original strand, 31447510 - 31447683
Alignment:
Q  14 catcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaagga-aatgaagggaaaaggatgagctacttca 112  Q
    ||||||||||| ||||||||||||||| ||||| ||||||||||| |||||||||||||||  |||||| | ||||| | ||||||||||||||||||||    
T  31447510 catcactcctttctatccagaagaagagtacattacaagggctgctagaattcatgctgggtttaaaagaagaatga-gagaaaaggatgagctacttca 31447608  T
Q  113 gaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaaca 187  Q
    |||||||||||| || || |||||| | || |||||| |||||||||||||||||||||||||||||||||||||    
T  31447609 gaagaaggatgagcaaattaagtatattttggaacagatgtataagcaagcccaaccttagttgcacacccaaca 31447683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 10 - 183
Target Start/End: Original strand, 39361270 - 39361443
Alignment:
Q  10 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaagga-aatgaagggaaaaggatgagctac 108  Q
    ||||||||||||||| ||| ||||||||||| ||||||||||||||||||||||||||||||||| ||||||| | |||| |||||||||||||||||||    
T  39361270 tggacatcactcctttctacccagaagaagagtacatcacaagggctgcaagaattcatgctgggtataaaagaagaatg-agggaaaaggatgagctac 39361368  T
Q  109 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacaccc 183  Q
    |  ||||||| ||||| || || |||||||| || |||||| |||| ||||||||||||||||||||||||||||    
T  39361369 tcaagaagaatgatgagcaaattaagtatcttttggaacagatgtacaagcaagcccaaccttagttgcacaccc 39361443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 10 - 180
Target Start/End: Original strand, 22156074 - 22156244
Alignment:
Q  10 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaatgaagggaaaaggatgagctact 109  Q
    ||||||||||||||| ||||||||||||||| |||||| |||||||  ||||||||||||||||| | ||||| | ||  |||||||| |||||||||||    
T  22156074 tggacatcactcctttctatccagaagaagagtacatctcaagggcaacaagaattcatgctgggtacaaaagaagattgagggaaaaagatgagctact 22156173  T
Q  110 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcaca 180  Q
      | ||||||||||| || ||||||||||| || |||||| |||| |||||| ||||||||||||||||||    
T  22156174 caaaaagaaggatgagcaaatcaagtatctattggaacagatgtacaagcaaacccaaccttagttgcaca 22156244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 10 - 225
Target Start/End: Original strand, 36697196 - 36697431
Alignment:
Q  10 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaatgaag------ggaa-------- 95  Q
    ||||||||||||||| ||||||||| | ||||||||||||||| |||||||||||| ||||||||||||| ||||| | |||      ||||            
T  36697196 tggacatcactcctttctatccagaggcagaatacatcacaagagctgcaagaatttatgctgggcataagaggaagttaagagagaaggaagaactact 36697295  T
Q  96 -------aaggatgagctacttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaacac 188  Q
           ||||||||||||||||||||||||||||| ||||| |    |||||||||||||||| | ||||||||||||||||||||||||||||||| |    
T  36697296 tcagaagaaggatgagctacttcagaagaaggatgaacagattagacttctcttagaacagttgaagaagcaagcccaaccttagttgcacacccaactc 36697395  T
Q  189 tagcttgttttttacttttgttcttagtagctttatc 225  Q
    ||||||| || |||||||||||||  |||| ||||||    
T  36697396 tagcttg-ttcttacttttgttctgtgtagttttatc 36697431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 95 - 185
Target Start/End: Complemental strand, 1110385 - 1110295
Alignment:
Q  95 aaaggatgagctacttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaa 185  Q
    ||||||||| | |||||||||||||||||| || || |||||||| || ||||||||||||||||||||| ||||||||||||||||||||    
T  1110385 aaaggatgaacaacttcagaagaaggatgagcaaattaagtatctattggaacagttgtataagcaagccaaaccttagttgcacacccaa 1110295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 95 - 185
Target Start/End: Original strand, 20796728 - 20796818
Alignment:
Q  95 aaaggatgagctacttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaa 185  Q
    ||||||||| | |||||||||||||||||| ||||| || ||||| || |||||| ||||||||| |||| ||||||||||||||||||||    
T  20796728 aaaggatgaacaacttcagaagaaggatgagcagattaaatatcttttggaacagatgtataagctagccaaaccttagttgcacacccaa 20796818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 185; Significance: 1e-100; HSPs: 23)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 10 - 222
Target Start/End: Original strand, 466541 - 466752
Alignment:
Q  10 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaatgaagggaaaaggatgagctact 109  Q
    |||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  466541 tggacatctctccttactatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 466640  T
Q  110 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaacactagcttgttttttacttttgt 209  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||    
T  466641 tcagaagaaagatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactctagcttg-tttttacttttgt 466739  T
Q  210 tcttagtagcttt 222  Q
    |||||||||||||    
T  466740 tcttagtagcttt 466752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 172; E-Value: 1e-92
Query Start/End: Original strand, 10 - 220
Target Start/End: Original strand, 2715185 - 2715395
Alignment:
Q  10 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaagga-aatgaagggaaaaggatgagctac 108  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| |||||| ||||||| | ||||| ||||||||||||||||||    
T  2715185 tggacatcactccttactatccagaagaagagtacatcacaagggctgctagaattcaggctgggtataaaagaagaatga-gggaaaaggatgagctac 2715283  T
Q  109 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaacactagcttgttttttacttttg 208  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2715284 ttcaaaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaacactagcttgttttttacttttg 2715383  T
Q  209 ttcttagtagct 220  Q
    ||||||||||||    
T  2715384 ttcttagtagct 2715395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 10 - 220
Target Start/End: Original strand, 8011635 - 8011845
Alignment:
Q  10 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaagga-aatgaagggaaaaggatgagctac 108  Q
    ||||||||||||||| ||||||||||||||| |||||||| |||||||| |||||||| |||||  ||||||| | ||||| | ||||||||||||||||    
T  8011635 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaaagaagaatga-gagaaaaggatgagctac 8011733  T
Q  109 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaacactagcttgttttttacttttg 208  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  8011734 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactctagcttgttttttacttttg 8011833  T
Q  209 ttcttagtagct 220  Q
    ||||||||||||    
T  8011834 ttcttagtagct 8011845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 10 - 220
Target Start/End: Complemental strand, 9086592 - 9086382
Alignment:
Q  10 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaagga-aatgaagggaaaaggatgagctac 108  Q
    ||||||||||||||| ||||||||||||||| |||||||| |||||||| |||||||| |||||  ||||| | | ||||| ||||||||||||||||||    
T  9086592 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaacgaagaatga-gggaaaaggatgagctac 9086494  T
Q  109 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaacactagcttgttttttacttttg 208  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  9086493 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactctagcttgttttttacttttg 9086394  T
Q  209 ttcttagtagct 220  Q
    ||||||||||||    
T  9086393 ttcttagtagct 9086382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 10 - 220
Target Start/End: Original strand, 40051652 - 40051862
Alignment:
Q  10 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaagga-aatgaagggaaaaggatgagctac 108  Q
    ||||||||||||||| ||||||||||||||| |||||||| |||||||| |||||||| |||||  ||||||| | ||||| ||||||||||||||||||    
T  40051652 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaaagaataatga-gggaaaaggatgagctac 40051750  T
Q  109 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaacactagcttgttttttacttttg 208  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  40051751 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactctagcttgttttttacttttg 40051850  T
Q  209 ttcttagtagct 220  Q
    ||||| ||||||    
T  40051851 ttcttcgtagct 40051862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 10 - 220
Target Start/End: Original strand, 26698677 - 26698887
Alignment:
Q  10 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaagga-aatgaagggaaaaggatgagctac 108  Q
    ||||||||||||||| ||||||||||||||| |||||||| |||||||| |||||||| |||||  ||||||| | ||||| ||||||||||||||||||    
T  26698677 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaaagaagaatga-gggaaaaggatgagctac 26698775  T
Q  109 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaacactagcttgttttttacttttg 208  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||    
T  26698776 ttcagaagaaggatgatcagatcaagtatctcttagaatagttgtataagcaagcccaaccttagttgcacatccaactctagcttgttttttacttttg 26698875  T
Q  209 ttcttagtagct 220  Q
    ||||||||||||    
T  26698876 ttcttagtagct 26698887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 10 - 220
Target Start/End: Complemental strand, 24736088 - 24735878
Alignment:
Q  10 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaagga-aatgaagggaaaaggatgagctac 108  Q
    ||||||||||||||| ||||||||||||||| |||||||| |||||||| |||||||| |||||   |||| | | ||||| ||||||||||||||||||    
T  24736088 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatttaaacgaagaatga-gggaaaaggatgagctac 24735990  T
Q  109 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaacactagcttgttttttacttttg 208  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  24735989 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactctagcttgttttttacttttg 24735890  T
Q  209 ttcttagtagct 220  Q
    ||||| ||||||    
T  24735889 ttcttcgtagct 24735878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 10 - 220
Target Start/End: Original strand, 26399644 - 26399854
Alignment:
Q  10 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaagga-aatgaagggaaaaggatgagctac 108  Q
    ||||||||||||||| ||||||||||||||| |||||||| |||||||| |||||||| |||||   |||| | | ||||| ||||||||||||||||||    
T  26399644 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatttaaacgaagaatga-gggaaaaggatgagctac 26399742  T
Q  109 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaacactagcttgttttttacttttg 208  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  26399743 ttcagaagaaggatgatcagatcaagtatctcttagaactgttgtataagcaagcccaaccttagttgcacacccaactctagcttgttttttacttttg 26399842  T
Q  209 ttcttagtagct 220  Q
    ||||||||||||    
T  26399843 ttcttagtagct 26399854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 10 - 220
Target Start/End: Complemental strand, 11097376 - 11097162
Alignment:
Q  10 tggacatcactccttactatccagaagaagaatacatcacaag-ggctgcaagaattcatgctgggcataaaagga-aatgaagggaaaaggatgagcta 107  Q
    ||||||||||||||| ||||||||||||||| |||||||| || |||||| |||||||| |||||  ||||||| | ||||| |||||||||||||||||    
T  11097376 tggacatcactcctttctatccagaagaagagtacatcactagtggctgctagaattcaggctggatataaaagaagaatga-gggaaaaggatgagcta 11097278  T
Q  108 cttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaacactagcttgtt---ttttact 204  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||   |||||||    
T  11097277 cttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactctagcttgtttttttttact 11097178  T
Q  205 tttgttcttagtagct 220  Q
    ||||||||||||||||    
T  11097177 tttgttcttagtagct 11097162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 10 - 212
Target Start/End: Complemental strand, 1988903 - 1988702
Alignment:
Q  10 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaagga-aatgaagggaaaaggatgagctac 108  Q
    ||||||||||||||| ||||||||||||||| |||||||| |||||||| |||||||| |||||  ||||||| | ||||| | ||||||||||||||||    
T  1988903 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaaagaagaatga-gagaaaaggatgagctac 1988805  T
Q  109 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaacactagcttgttttttacttttg 208  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  1988804 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactctagcttgt-ttttacttttg 1988706  T
Q  209 ttct 212  Q
    ||||    
T  1988705 ttct 1988702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 10 - 212
Target Start/End: Complemental strand, 11006552 - 11006351
Alignment:
Q  10 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaagga-aatgaagggaaaaggatgagctac 108  Q
    ||||||||||||||| |||||| |||||||| || |||||||| ||||||||||||||||||||||||  ||| | ||||| ||||||||||||||||||    
T  11006552 tggacatcactcctttctatcctgaagaagagtatatcacaagagctgcaagaattcatgctgggcatgtaagaagaatga-gggaaaaggatgagctac 11006454  T
Q  109 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaacactagcttgttttttacttttg 208  Q
    || ||||||| ||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  11006453 ttaagaagaaagatgaacagatcaagtatctcttagaacagctgtataagcaagcccaaccttagttgcacacccaactctagcttgt-ttttacttttg 11006355  T
Q  209 ttct 212  Q
    ||||    
T  11006354 ttct 11006351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 10 - 212
Target Start/End: Complemental strand, 42867193 - 42866992
Alignment:
Q  10 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaagga-aatgaagggaaaaggatgagctac 108  Q
    ||||||||||||||| |||||| |||||||| || |||||||| ||||||||||||||||||||||||  ||| | ||||| ||||||||||||||||||    
T  42867193 tggacatcactcctttctatcctgaagaagagtatatcacaagagctgcaagaattcatgctgggcatgtaagaagaatga-gggaaaaggatgagctac 42867095  T
Q  109 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaacactagcttgttttttacttttg 208  Q
    || ||||||| ||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  42867094 ttaagaagaaagatgaacagatcaagtatctcttagaacagctgtataagcaagcccaaccttagttgcacacccaactctagcttgt-ttttacttttg 42866996  T
Q  209 ttct 212  Q
    ||||    
T  42866995 ttct 42866992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 10 - 185
Target Start/End: Original strand, 21001956 - 21002131
Alignment:
Q  10 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaagga-aatgaagggaaaaggatgagctac 108  Q
    ||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||  |||||| | ||||| | ||||||||||||||||    
T  21001956 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggtttaaaagaagaatga-gagaaaaggatgagctac 21002054  T
Q  109 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaa 185  Q
    || ||||||||||||| || || ||||||||||| |||||| |||||||||||||||||||||||||||||||||||    
T  21002055 ttaagaagaaggatgagcaaattaagtatctcttggaacagatgtataagcaagcccaaccttagttgcacacccaa 21002131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 10 - 184
Target Start/End: Complemental strand, 5686897 - 5686723
Alignment:
Q  10 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaagga-aatgaagggaaaaggatgagctac 108  Q
    ||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||  |||||| | ||||| | ||||||||||||||||    
T  5686897 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggtttaaaagaagaatga-gagaaaaggatgagctac 5686799  T
Q  109 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacaccca 184  Q
    || ||||||||||||| || || ||||||||||| |||||| ||||||||||||||||||||||||||||||||||    
T  5686798 ttaagaagaaggatgagcaaattaagtatctcttggaacagatgtataagcaagcccaaccttagttgcacaccca 5686723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 10 - 184
Target Start/End: Complemental strand, 9434601 - 9434427
Alignment:
Q  10 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaagga-aatgaagggaaaaggatgagctac 108  Q
    ||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||  |||||| | ||||| | ||||||||||||||||    
T  9434601 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggtttaaaagaagaatga-gagaaaaggatgagctac 9434503  T
Q  109 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacaccca 184  Q
    || ||||||||||||| || || ||||||||||| |||||| ||||||||||||||||||||||||||||||||||    
T  9434502 ttaagaagaaggatgagcaaattaagtatctcttggaacagatgtataagcaagcccaaccttagttgcacaccca 9434427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 10 - 184
Target Start/End: Original strand, 6876791 - 6876965
Alignment:
Q  10 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaagga-aatgaagggaaaaggatgagctac 108  Q
    ||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||| | |||| || ||||||||||||||||    
T  6876791 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggtataaaagaagaatg-agagaaaaggatgagctac 6876889  T
Q  109 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacaccca 184  Q
    || ||||||||||||| || || |||||||| || |||||| |||| |||||||||||||||||||||||||||||    
T  6876890 ttaagaagaaggatgagcaaattaagtatcttttggaacagatgtacaagcaagcccaaccttagttgcacaccca 6876965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 12 - 189
Target Start/End: Original strand, 19992966 - 19993143
Alignment:
Q  12 gacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaagga-aatgaagggaaaaggatgagctactt 110  Q
    ||||||||||||| ||||||||||||||| ||||||||||||||||| ||||||||||||||    ||||| | ||||| | |||||||||||| |||||    
T  19992966 gacatcactcctttctatccagaagaagagtacatcacaagggctgctagaattcatgctggattcaaaagaagaatga-gagaaaaggatgagttactt 19993064  T
Q  111 cagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaacact 189  Q
     ||||||||||||| || || ||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||    
T  19993065 aagaagaaggatgagcaaattaagtatctcttggaacagatgtataagcaagcccaaccttagttgcacacccaacact 19993143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 10 - 182
Target Start/End: Complemental strand, 22090544 - 22090372
Alignment:
Q  10 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaagga-aatgaagggaaaaggatgagctac 108  Q
    ||||||||||||||| ||||||||||||||| ||||||||||||||  | ||||||||||||||| ||||||| | ||||| ||||||||||||||||||    
T  22090544 tggacatcactcctttctatccagaagaagagtacatcacaagggcaaccagaattcatgctgggtataaaagaagaatga-gggaaaaggatgagctac 22090446  T
Q  109 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacc 182  Q
    |  | ||||||||||| || ||||||||||| || |||||| |||| |||||| ||||||||||||||||||||    
T  22090445 tcaaaaagaaggatgagcaaatcaagtatctattggaacagatgtacaagcaaacccaaccttagttgcacacc 22090372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 10 - 180
Target Start/End: Complemental strand, 4213389 - 4213219
Alignment:
Q  10 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaagga-aatgaagggaaaaggatgagctac 108  Q
    ||||||||||||||| ||||||||||||||| ||||| ||||||||  ||||||||||||||||| ||||||| | |||| |||||||| ||||||||||    
T  4213389 tggacatcactcctttctatccagaagaagagtacattacaagggcatcaagaattcatgctgggtataaaagaagaatg-agggaaaatgatgagctac 4213291  T
Q  109 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcaca 180  Q
    |  |||||||||||||  | ||||||||||| || |||||| |||| |||||| ||||||||||||||||||    
T  4213290 tcaagaagaaggatgagaaaatcaagtatctattggaacagatgtacaagcaaacccaaccttagttgcaca 4213219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 10 - 180
Target Start/End: Original strand, 17959623 - 17959793
Alignment:
Q  10 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaagga-aatgaagggaaaaggatgagctac 108  Q
    ||||||||||||||| ||||||||||||||| |||||| |||||||  ||||||||||||||||| | ||||| | ||||| ||||||||||||||||||    
T  17959623 tggacatcactcctttctatccagaagaagagtacatctcaagggcaacaagaattcatgctgggtacaaaagaagaatga-gggaaaaggatgagctac 17959721  T
Q  109 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcaca 180  Q
    |  | ||||||||||| || ||||||||||| || |||||| |||| |||||| ||||||||||||||||||    
T  17959722 tcaaaaagaaggatgagcaaatcaagtatctattggaacagatgtacaagcaaacccaaccttagttgcaca 17959793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 10 - 180
Target Start/End: Complemental strand, 168260 - 168090
Alignment:
Q  10 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaatgaagggaaaaggatgagctact 109  Q
    ||||||||||||||| ||||||||||||||| |||||| |||||||  ||||||||||||||||| | ||||| | ||  |||||||| |||||||||||    
T  168260 tggacatcactcctttctatccagaagaagagtacatctcaagggcaacaagaattcatgctgggtacaaaagaagattgagggaaaaagatgagctact 168161  T
Q  110 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcaca 180  Q
      | ||||||||||| || ||||||||||| || |||||| |||| |||||| ||||||||||||||||||    
T  168160 caaaaagaaggatgagcaaatcaagtatctattggaacagatgtacaagcaaacccaaccttagttgcaca 168090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 10 - 178
Target Start/End: Complemental strand, 8618755 - 8618587
Alignment:
Q  10 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaagga-aatgaagggaaaaggatgagctac 108  Q
    ||||||||||||||| ||||||||||||||| |||||| |||||||  ||||||||||||||||| | ||||  | |||| |||||||||||||||||||    
T  8618755 tggacatcactcctttctatccagaagaagagtacatctcaagggcaacaagaattcatgctgggtacaaaataagaatg-agggaaaaggatgagctac 8618657  T
Q  109 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgca 178  Q
    |  | ||||||||||| || ||||||||||| || |||||| |||| |||||| ||||||||||||||||    
T  8618656 tcaaaaagaaggatgagcaaatcaagtatctattggaacagatgtacaagcaaacccaaccttagttgca 8618587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 181
Target Start/End: Original strand, 15887291 - 15887365
Alignment:
Q  107 acttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacac 181  Q
    |||||||||||| ||||| ||| | || ||||| || |||||| ||| ||||| |||| ||||||||||||||||    
T  15887291 acttcagaagaatgatgagcaggttaaatatctattggaacagatgtctaagctagccaaaccttagttgcacac 15887365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 174; Significance: 1e-93; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 10 - 222
Target Start/End: Complemental strand, 12856273 - 12856061
Alignment:
Q  10 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaagga-aatgaagggaaaaggatgagctac 108  Q
    ||||||||||||||| ||||||||||||||| ||||||||||||||||| |||||||| |||||| ||||||| | ||||| ||||||||||||||||||    
T  12856273 tggacatcactcctttctatccagaagaagagtacatcacaagggctgctagaattcaggctgggtataaaagaagaatga-gggaaaaggatgagctac 12856175  T
Q  109 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaacactagcttgttttttacttttg 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12856174 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaacactagcttgttttttacttttg 12856075  T
Q  209 ttcttagtagcttt 222  Q
    ||||||||||||||    
T  12856074 ttcttagtagcttt 12856061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 10 - 220
Target Start/End: Complemental strand, 26866116 - 26865906
Alignment:
Q  10 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaagga-aatgaagggaaaaggatgagctac 108  Q
    ||||||||||||||| ||||||||||||||| ||||||||||||||||| |||||||| |||||  ||||||| | ||||| ||||||||||||||||||    
T  26866116 tggacatcactcctttctatccagaagaagagtacatcacaagggctgctagaattcaggctggatataaaagaagaatga-gggaaaaggatgagctac 26866018  T
Q  109 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaacactagcttgttttttacttttg 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26866017 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaacactagcttgttttttacttttg 26865918  T
Q  209 ttcttagtagct 220  Q
    ||||||||||||    
T  26865917 ttcttagtagct 26865906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 10 - 220
Target Start/End: Complemental strand, 3662668 - 3662458
Alignment:
Q  10 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaagga-aatgaagggaaaaggatgagctac 108  Q
    ||||||||||||||| ||||||||||||||| |||||||| |||||||| |||||||| |||||  ||||||| | ||||| ||||||||||||||||||    
T  3662668 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaaagaagaatga-gggaaaaggatgagctac 3662570  T
Q  109 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaacactagcttgttttttacttttg 208  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  3662569 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactctagcttgttttttacttttg 3662470  T
Q  209 ttcttagtagct 220  Q
    ||||||||||||    
T  3662469 ttcttagtagct 3662458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 10 - 220
Target Start/End: Complemental strand, 25789052 - 25788842
Alignment:
Q  10 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaagga-aatgaagggaaaaggatgagctac 108  Q
    ||||||||||||||| ||||||||||||||| |||||||| |||||||| |||||||| |||||  ||||||| | ||||| ||||||||||||||||||    
T  25789052 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaaagaagaatga-gggaaaaggatgagctac 25788954  T
Q  109 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaacactagcttgttttttacttttg 208  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  25788953 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactctagcttgttttttacttttg 25788854  T
Q  209 ttcttagtagct 220  Q
    ||||||||||||    
T  25788853 ttcttagtagct 25788842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 10 - 220
Target Start/End: Complemental strand, 27343051 - 27342841
Alignment:
Q  10 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaagga-aatgaagggaaaaggatgagctac 108  Q
    ||||||||||||||| ||||||||||||||| |||||||| |||||||| |||||||| |||||  ||||||| | ||||| ||||||||||||||||||    
T  27343051 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaaagaagaatga-gggaaaaggatgagctac 27342953  T
Q  109 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaacactagcttgttttttacttttg 208  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  27342952 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactctagcttgttttttacttttg 27342853  T
Q  209 ttcttagtagct 220  Q
    ||||| ||||||    
T  27342852 ttcttcgtagct 27342841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 10 - 220
Target Start/End: Complemental strand, 27403791 - 27403581
Alignment:
Q  10 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaagga-aatgaagggaaaaggatgagctac 108  Q
    ||||||||||||||| ||||||||||||||| |||||||| |||||||| |||||||| |||||  ||||||| | ||||| ||||||||||||||||||    
T  27403791 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaaagaagaatga-gggaaaaggatgagctac 27403693  T
Q  109 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaacactagcttgttttttacttttg 208  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  27403692 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactctagcttgttttttacttttg 27403593  T
Q  209 ttcttagtagct 220  Q
    ||||| ||||||    
T  27403592 ttcttcgtagct 27403581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 10 - 220
Target Start/End: Complemental strand, 16931718 - 16931508
Alignment:
Q  10 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaagga-aatgaagggaaaaggatgagctac 108  Q
    ||||||||||||||| ||||||||||||||| |||||||| |||||||| |||||||| |||||  ||||| | | ||||| ||||||||||||||||||    
T  16931718 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaacgaagaatga-gggaaaaggatgagctac 16931620  T
Q  109 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaacactagcttgttttttacttttg 208  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  16931619 ttcagaagaaggatgatcagatcaagtatctcttagaacagtngtataagcaagcccaaccttagttgcacacccaactctagcttgttttttacttttg 16931520  T
Q  209 ttcttagtagct 220  Q
    ||||||||||||    
T  16931519 ttcttagtagct 16931508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 10 - 220
Target Start/End: Original strand, 12726317 - 12726527
Alignment:
Q  10 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaagga-aatgaagggaaaaggatgagctac 108  Q
    ||||||||||||||| ||||||||||||||| |||||||| |||||||| |||||||| |||||   |||| | | ||||| ||||||||||||||||||    
T  12726317 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatttaaacgaagaatga-gggaaaaggatgagctac 12726415  T
Q  109 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaacactagcttgttttttacttttg 208  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  12726416 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactctagcttgttttttacttttg 12726515  T
Q  209 ttcttagtagct 220  Q
    ||||||||||||    
T  12726516 ttcttagtagct 12726527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 10 - 220
Target Start/End: Complemental strand, 26026743 - 26026533
Alignment:
Q  10 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaagga-aatgaagggaaaaggatgagctac 108  Q
    ||||||||||||||| ||||||||||||||| |||||||| |||||||| |||||||| |||||   |||| | | ||||| ||||||||||||||||||    
T  26026743 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatttaaacgaagaatga-gggaaaaggatgagctac 26026645  T
Q  109 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaacactagcttgttttttacttttg 208  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  26026644 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactctagcttgttttttacttttg 26026545  T
Q  209 ttcttagtagct 220  Q
    ||||| ||||||    
T  26026544 ttcttcgtagct 26026533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 10 - 220
Target Start/End: Original strand, 17983618 - 17983832
Alignment:
Q  10 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaagga-aatgaagggaaaaggatgagctac 108  Q
    ||||||||||||||| ||||||||||||||| |||||||| |||||||| |||||||| |||||  ||||||| | ||||| ||||||||||||||||||    
T  17983618 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaaagaagaatga-gggaaaaggatgagctac 17983716  T
Q  109 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaacactagcttg----ttttttact 204  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    |||||||||    
T  17983717 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactctagcttgttttttttttact 17983816  T
Q  205 tttgttcttagtagct 220  Q
    ||||||||||||||||    
T  17983817 tttgttcttagtagct 17983832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 10 - 185
Target Start/End: Original strand, 9122013 - 9122188
Alignment:
Q  10 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaagga-aatgaagggaaaaggatgagctac 108  Q
    ||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||  |||||| | ||||| | ||||||||||||||||    
T  9122013 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggtttaaaagaagaatga-gagaaaaggatgagctac 9122111  T
Q  109 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaa 185  Q
    || ||||||||||||| || || ||||||||||| |||||| |||||||||||||||||||||||||||||||||||    
T  9122112 ttaagaagaaggatgagcaaattaagtatctcttggaacagatgtataagcaagcccaaccttagttgcacacccaa 9122188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 10 - 189
Target Start/End: Complemental strand, 27374107 - 27373928
Alignment:
Q  10 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaagga-aatgaagggaaaaggatgagctac 108  Q
    ||||||||||||||| ||||| ||||||||| || |||||||||||||||||||||||||||||| ||||||| | ||||| | ||||||||||||||||    
T  27374107 tggacatcactcctttctatctagaagaagagtatatcacaagggctgcaagaattcatgctgggtataaaagaagaatga-gagaaaaggatgagctac 27374009  T
Q  109 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaacact 189  Q
    ||||||||||||||||||| || ||||| || || |||||| |||||||||||||||||||||||||||||||||||||||    
T  27374008 ttcagaagaaggatgatcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacacccaacact 27373928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 10 - 189
Target Start/End: Complemental strand, 27464460 - 27464281
Alignment:
Q  10 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaagga-aatgaagggaaaaggatgagctac 108  Q
    ||||||||||||||| ||||| ||||||||| || |||||||||||||||||||||||||||||| ||||||| | ||||| | ||||||||||||||||    
T  27464460 tggacatcactcctttctatctagaagaagagtatatcacaagggctgcaagaattcatgctgggtataaaagaagaatga-gagaaaaggatgagctac 27464362  T
Q  109 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaacact 189  Q
    ||||||||||||||||||| || ||||| || || |||||| |||||||||||||||||||||||||||||||||||||||    
T  27464361 ttcagaagaaggatgatcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacacccaacact 27464281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 12 - 184
Target Start/End: Complemental strand, 25590532 - 25590360
Alignment:
Q  12 gacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaa-atgaagggaaaaggatgagctactt 110  Q
    ||||||||||||| ||||||||||||||| ||||||||||||||||||||||| |||||||||  |||||| |  |||| | || |||||||| || |||    
T  25590532 gacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgctgggtttaaaagaaggatga-gagagaaggatgaacttctt 25590434  T
Q  111 cagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacaccca 184  Q
     ||||||||||||| || || ||||| |||||||||||| ||||||||||||||||||||||||||||||||||    
T  25590433 aagaagaaggatgagcaaattaagtacctcttagaacagatgtataagcaagcccaaccttagttgcacaccca 25590360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 10 - 180
Target Start/End: Original strand, 34816655 - 34816825
Alignment:
Q  10 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaatgaagggaaaaggatgagctact 109  Q
    ||||||||||||||| ||||||||||||||| |||||| |||||||  ||||||||||||||||| | ||||| | ||  |||||||| |||||||||||    
T  34816655 tggacatcactcctttctatccagaagaagagtacatctcaagggcaacaagaattcatgctgggtacaaaagaagattgagggaaaaagatgagctact 34816754  T
Q  110 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcaca 180  Q
      | ||||||||||| || ||||||||||| || |||||| |||| |||||| ||||||||||||||||||    
T  34816755 caaaaagaaggatgagcaaatcaagtatctattggaacagatgtacaagcaaacccaaccttagttgcaca 34816825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 10 - 178
Target Start/End: Original strand, 32971358 - 32971526
Alignment:
Q  10 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaatgaagggaaaaggatgagctact 109  Q
    ||||||||||||||| ||||||||||||||| |||||| |||||||  ||||||||||||||||| | ||||| | ||  |||||||| |||||||||||    
T  32971358 tggacatcactcctttctatccagaagaagagtacatctcaagggcaacaagaattcatgctgggtacaaaagaagattgagggaaaatgatgagctact 32971457  T
Q  110 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgca 178  Q
      | ||||||||||| || ||||||||||| || |||||| |||| |||||| ||||||||||||||||    
T  32971458 caaaaagaaggatgagcaaatcaagtatctattggaacagatgtacaagcaaacccaaccttagttgca 32971526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 10 - 225
Target Start/End: Complemental strand, 27385760 - 27385525
Alignment:
Q  10 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaatgaag------ggaa-------- 95  Q
    ||||||||||||||| ||||||||| | ||||||||||||||| |||||||||||||||||||||||||| ||||| | |||      ||||            
T  27385760 tggacatcactcctttctatccagaggcagaatacatcacaagagctgcaagaattcatgctgggcataagaggaagttaagagagaaggaagaactact 27385661  T
Q  96 -------aaggatgagctacttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaacac 188  Q
           ||||||||||||||||||||||||||||| ||||| |    |||||||||||||||| | ||||||||||||||||||||||||||||||| |    
T  27385660 tcagaagaaggatgagctacttcagaagaaggatgaacagattagacttctcttagaacagttgaagaagcaagcccaaccttagttgcacacccaactc 27385561  T
Q  189 tagcttgttttttacttttgttcttagtagctttatc 225  Q
    |||||||| |||||||||||||||  |||| ||||||    
T  27385560 tagcttgt-ttttacttttgttctgtgtagttttatc 27385525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 10 - 225
Target Start/End: Complemental strand, 27476173 - 27475938
Alignment:
Q  10 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaatgaag------ggaa-------- 95  Q
    ||||||||||||||| ||||||||| | ||||||||||||||| |||||||||||||||||||||||||| ||||| | |||      ||||            
T  27476173 tggacatcactcctttctatccagaggcagaatacatcacaagagctgcaagaattcatgctgggcataagaggaagttaagagagaaggaagaactact 27476074  T
Q  96 -------aaggatgagctacttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaacac 188  Q
           ||||||||||||||||||||||||||||| ||||| |    |||||||||||||||| | ||||||||||||||||||||||||||||||| |    
T  27476073 tcagaagaaggatgagctacttcagaagaaggatgaacagattagacttctcttagaacagttgaagaagcaagcccaaccttagttgcacacccaactc 27475974  T
Q  189 tagcttgttttttacttttgttcttagtagctttatc 225  Q
    |||||||| |||||||||||||||  |||| ||||||    
T  27475973 tagcttgt-ttttacttttgttctgtgtagttttatc 27475938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 10 - 225
Target Start/End: Complemental strand, 4632234 - 4631999
Alignment:
Q  10 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaatgaag------ggaa-------- 95  Q
    ||||||||||||||| ||||||||| | ||||||||||||||| |||||||||||| ||||||||||||| ||||| | |||      ||||            
T  4632234 tggacatcactcctttctatccagaggcagaatacatcacaagagctgcaagaatttatgctgggcataagaggaagttaagagagaaggaagaactact 4632135  T
Q  96 -------aaggatgagctacttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaacac 188  Q
           ||||||||||||||||||||||||||||| ||||| |    |||||||||||||||| | ||||||||||||||||||||||||||||||| |    
T  4632134 tcagaagaaggatgagctacttcagaagaaggatgaacagattagacttctcttagaacagttgaagaagcaagcccaaccttagttgcacacccaactc 4632035  T
Q  189 tagcttgttttttacttttgttcttagtagctttatc 225  Q
    ||||||| || |||||||||||||  |||| ||||||    
T  4632034 tagcttg-ttcttacttttgttctgtgtagttttatc 4631999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 10 - 225
Target Start/End: Original strand, 32310543 - 32310778
Alignment:
Q  10 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaatgaag------ggaa-------- 95  Q
    ||||||||||||||| ||||||||| | ||||||||||||||| |||||||||||| ||||||||||||| ||||| | |||      ||||            
T  32310543 tggacatcactcctttctatccagaggcagaatacatcacaagagctgcaagaatttatgctgggcataagaggaagttaagagagaaggaagaactact 32310642  T
Q  96 -------aaggatgagctacttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaacac 188  Q
           ||||||||||||||||||||||||||||| ||||| |    |||||||||||||||| | ||||||||||||||||||||||||||||||| |    
T  32310643 tcagaagaaggatgagctacttcagaagaaggatgaacagattagacttctcttagaacagttgaagaagcaagcccaaccttagttgcacacccaactc 32310742  T
Q  189 tagcttgttttttacttttgttcttagtagctttatc 225  Q
    ||||||| || |||||||||||||  |||| ||||||    
T  32310743 tagcttg-ttcttacttttgttctgtgtagttttatc 32310778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 93 - 184
Target Start/End: Original strand, 7669375 - 7669466
Alignment:
Q  93 gaaaaggatgagctacttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacaccca 184  Q
    |||||||||||||||||  ||||||||||||| || ||||||||||| || |||||| |||| |||||||||||||||||||||||||||||    
T  7669375 gaaaaggatgagctactcaagaagaaggatgagcaaatcaagtatcttttggaacagatgtacaagcaagcccaaccttagttgcacaccca 7669466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 107 - 181
Target Start/End: Complemental strand, 12359372 - 12359298
Alignment:
Q  107 acttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacac 181  Q
    |||||||||||||||||||||||| || ||||| || |||||| ||| ||||| |||| ||||||||||||||||    
T  12359372 acttcagaagaaggatgatcagattaaatatctattggaacagatgtctaagctagccaaaccttagttgcacac 12359298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 160; Significance: 2e-85; HSPs: 19)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 10 - 220
Target Start/End: Original strand, 209087 - 209297
Alignment:
Q  10 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaagga-aatgaagggaaaaggatgagctac 108  Q
    ||||||||||||||| ||||||||||||||| |||||||| |||||||| |||||||| |||||  ||||||| | ||||| ||||||||||||||||||    
T  209087 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaaagaagaatga-gggaaaaggatgagctac 209185  T
Q  109 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaacactagcttgttttttacttttg 208  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  209186 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactctagcttgttttttacttttg 209285  T
Q  209 ttcttagtagct 220  Q
    ||||||||||||    
T  209286 ttcttagtagct 209297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 10 - 220
Target Start/End: Original strand, 722710 - 722920
Alignment:
Q  10 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaagga-aatgaagggaaaaggatgagctac 108  Q
    ||||||||||||||| ||||||||||||||| |||||||| |||||||| |||||||| |||||  ||||||| | ||||| ||||||||||||||||||    
T  722710 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaaagaagaatga-gggaaaaggatgagctac 722808  T
Q  109 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaacactagcttgttttttacttttg 208  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  722809 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactctagcttgttttttacttttg 722908  T
Q  209 ttcttagtagct 220  Q
    ||||||||||||    
T  722909 ttcttagtagct 722920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 10 - 220
Target Start/End: Complemental strand, 29078066 - 29077856
Alignment:
Q  10 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaagga-aatgaagggaaaaggatgagctac 108  Q
    ||||||||||||||| ||||||||||||||| |||||||| |||||||| |||||||| |||||  ||||||| | ||||| ||||||||||||||||||    
T  29078066 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaaagaagaatga-gggaaaaggatgagctac 29077968  T
Q  109 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaacactagcttgttttttacttttg 208  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  29077967 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactctagcttgttttttacttttg 29077868  T
Q  209 ttcttagtagct 220  Q
    ||||||||||||    
T  29077867 ttcttagtagct 29077856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 10 - 220
Target Start/End: Original strand, 32087203 - 32087413
Alignment:
Q  10 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaagga-aatgaagggaaaaggatgagctac 108  Q
    ||||||||||||||| ||||||||||||||| |||||||| |||||||| |||||||| |||||  ||||||| | ||||| ||||||||||||||||||    
T  32087203 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaaagaagaatga-gggaaaaggatgagctac 32087301  T
Q  109 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaacactagcttgttttttacttttg 208  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  32087302 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactctagcttgttttttacttttg 32087401  T
Q  209 ttcttagtagct 220  Q
    ||||||||||||    
T  32087402 ttcttagtagct 32087413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 10 - 220
Target Start/End: Complemental strand, 243168 - 242959
Alignment:
Q  10 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaagga-aatgaagggaaaaggatgagctac 108  Q
    ||||||||||||||| ||||||||||||||| |||||||| |||||||| |||||||| |||||  ||||||| | ||||| ||||||||||||||||||    
T  243168 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaaagaagaatga-gggaaaaggatgagctac 243070  T
Q  109 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaacactagcttgttttttacttttg 208  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||    
T  243069 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactctagcttgttttttac-tttg 242971  T
Q  209 ttcttagtagct 220  Q
    ||||||||||||    
T  242970 ttcttagtagct 242959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 10 - 220
Target Start/End: Complemental strand, 796538 - 796329
Alignment:
Q  10 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaagga-aatgaagggaaaaggatgagctac 108  Q
    ||||||||||||||| ||||||||||||||| |||||||| |||||||| |||||||| |||||  ||||||| | ||||| ||||||||||||||||||    
T  796538 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaaagaagaatga-gggaaaaggatgagctac 796440  T
Q  109 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaacactagcttgttttttacttttg 208  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||    
T  796439 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactctagcttgttttttac-tttg 796341  T
Q  209 ttcttagtagct 220  Q
    ||||||||||||    
T  796340 ttcttagtagct 796329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 10 - 222
Target Start/End: Original strand, 15766081 - 15766296
Alignment:
Q  10 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaagga-aatgaagggaaaaggatgagctac 108  Q
    ||||||||||||||| ||||||||||||||| ||||||||||||||||| |||||||| |||||| ||||||| | ||||| |||||||| |||||||||    
T  15766081 tggacatcactcctttctatccagaagaagagtacatcacaagggctgctagaattcaggctgggtataaaagaagaatga-gggaaaagaatgagctac 15766179  T
Q  109 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaacactagcttg---ttttttactt 205  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||   ||||||||||    
T  15766180 tttagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactctagcttgtttttttttactt 15766279  T
Q  206 ttgttcttagtagcttt 222  Q
    |||||||||||||||||    
T  15766280 ttgttcttagtagcttt 15766296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 10 - 222
Target Start/End: Original strand, 15790218 - 15790433
Alignment:
Q  10 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaagga-aatgaagggaaaaggatgagctac 108  Q
    ||||||||||||||| ||||||||||||||| ||||||||||||||||| |||||||| |||||| ||||||| | ||||| ||||||||||||||||||    
T  15790218 tggacatcactcctttctatccagaagaagagtacatcacaagggctgctagaattcaggctgggtataaaagaagaatga-gggaaaaggatgagctac 15790316  T
Q  109 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaacactagcttg---ttttttactt 205  Q
    || ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||   ||||||||||    
T  15790317 tttagaagaaggatgatcggatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactctagcttgtttttttttactt 15790416  T
Q  206 ttgttcttagtagcttt 222  Q
    |||||||||||||||||    
T  15790417 ttgttcttagtagcttt 15790433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 10 - 213
Target Start/End: Original strand, 3358139 - 3358342
Alignment:
Q  10 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaagga-aatgaagggaaaaggatgagctac 108  Q
    ||||||||||||||| ||||||||||||||| |||||||| |||||||| |||||||| |||||   |||| | | ||||| ||||||||||||||||||    
T  3358139 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatttaaacgaagaatga-gggaaaaggatgagctac 3358237  T
Q  109 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaacactagcttgttttttacttttg 208  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  3358238 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactctagcttgttttttacttttg 3358337  T
Q  209 ttctt 213  Q
    |||||    
T  3358338 ttctt 3358342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 10 - 220
Target Start/End: Complemental strand, 36294285 - 36294075
Alignment:
Q  10 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaagga-aatgaagggaaaaggatgagctac 108  Q
    ||||||||||||||| ||||||||||||||| |||||||| |||||||| |||||||| |||||   |||| | | ||||| | ||||||||||||||||    
T  36294285 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatttaaacgaagaatga-gagaaaaggatgagctac 36294187  T
Q  109 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaacactagcttgttttttacttttg 208  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  36294186 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactctagcttgttttttacttttg 36294087  T
Q  209 ttcttagtagct 220  Q
    |||| |||||||    
T  36294086 ttctcagtagct 36294075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 10 - 220
Target Start/End: Complemental strand, 9342490 - 9342280
Alignment:
Q  10 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaagga-aatgaagggaaaaggatgagctac 108  Q
    ||||||||||||||| ||||||||||||||| |||||||| |||||||| |||||||| |||||   |||| | | ||||| ||||||||||||||||||    
T  9342490 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatttaaacgaagaatga-gggaaaaggatgagctac 9342392  T
Q  109 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaacactagcttgttttttacttttg 208  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | |||||||||||||    
T  9342391 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactctagcatattttttacttttg 9342292  T
Q  209 ttcttagtagct 220  Q
    ||||| ||||||    
T  9342291 ttcttcgtagct 9342280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 10 - 212
Target Start/End: Original strand, 13687498 - 13687699
Alignment:
Q  10 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaagga-aatgaagggaaaaggatgagctac 108  Q
    ||||||||||||||| |||||| |||||||| || |||||||| ||||||||||||||||||||||||  ||| | ||||| ||||||||||||||||||    
T  13687498 tggacatcactcctttctatcctgaagaagagtatatcacaagagctgcaagaattcatgctgggcatgtaagaagaatga-gggaaaaggatgagctac 13687596  T
Q  109 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaacactagcttgttttttacttttg 208  Q
    || ||||||| ||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  13687597 ttaagaagaaagatgaacagatcaagtatctcttagaacagctgtataagcaagcccaaccttagttgcacacccaactctagcttg-tttttacttttg 13687695  T
Q  209 ttct 212  Q
    ||||    
T  13687696 ttct 13687699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 10 - 212
Target Start/End: Complemental strand, 36079290 - 36079089
Alignment:
Q  10 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaagga-aatgaagggaaaaggatgagctac 108  Q
    ||||||||||||||| |||||| |||||||| || |||||||| ||||||||||||||||||||||||  ||| | ||||| ||||||||||||||||||    
T  36079290 tggacatcactcctttctatcctgaagaagagtatatcacaagagctgcaagaattcatgctgggcatgtaagaagaatga-gggaaaaggatgagctac 36079192  T
Q  109 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaacactagcttgttttttacttttg 208  Q
    || ||||||| ||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  36079191 ttaagaagaaagatgaacagatcaagtatctcttagaacagctgtataagcaagcccaaccttagttgcacacccaactctagcttgt-ttttacttttg 36079093  T
Q  209 ttct 212  Q
    ||||    
T  36079092 ttct 36079089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 10 - 184
Target Start/End: Complemental strand, 26112642 - 26112468
Alignment:
Q  10 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaagga-aatgaagggaaaaggatgagctac 108  Q
    ||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||| | |||| || ||||||||||||||||    
T  26112642 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggtataaaagaagaatg-agagaaaaggatgagctac 26112544  T
Q  109 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacaccca 184  Q
    || || |||||||||| || || |||||||| || |||||| |||| |||||||||||||||||||||||||||||    
T  26112543 ttaagcagaaggatgaacaaattaagtatcttttggaacagatgtacaagcaagcccaaccttagttgcacaccca 26112468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 10 - 184
Target Start/End: Complemental strand, 19130112 - 19129938
Alignment:
Q  10 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaagga-aatgaagggaaaaggatgagctac 108  Q
    ||||||||||||||| ||||||||||||||| ||||| |||||||||||||||||||||| ||||  |||||| | ||||| | ||||||||||||||||    
T  19130112 tggacatcactcctttctatccagaagaagagtacattacaagggctgcaagaattcatgttgggtttaaaagaagaatga-gagaaaaggatgagctac 19130014  T
Q  109 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacaccca 184  Q
    || ||||||||||| | || || |||||||| || |||||| |||| |||||||||||||||||||||||||||||    
T  19130013 ttaagaagaaggatcagcaaattaagtatcttttggaacagatgtacaagcaagcccaaccttagttgcacaccca 19129938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 10 - 180
Target Start/End: Complemental strand, 6152462 - 6152292
Alignment:
Q  10 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaatgaagggaaaaggatgagctact 109  Q
    ||||||||||||||| ||||| ||||||||| |||||| |||||||  ||||||||||||||||| | ||||| | ||  ||||||||||||||||||||    
T  6152462 tggacatcactcctttctatcgagaagaagagtacatctcaagggcaacaagaattcatgctgggtacaaaagaagattgagggaaaaggatgagctact 6152363  T
Q  110 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcaca 180  Q
      | |||||| |||| || ||||||||||| || |||||| |||| |||||| ||||||||||||||||||    
T  6152362 caaaaagaagaatgagcaaatcaagtatctattggaacagatgtacaagcaaacccaaccttagttgcaca 6152292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 10 - 225
Target Start/End: Complemental strand, 44482503 - 44482268
Alignment:
Q  10 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaatgaag------ggaa-------- 95  Q
    ||||||||||||||| ||||||||| | ||||||||||||||| |||||||||||| ||||||||||||| ||||| | |||      ||||            
T  44482503 tggacatcactcctttctatccagaggcagaatacatcacaagagctgcaagaatttatgctgggcataagaggaagttaagagagaaggaagaactact 44482404  T
Q  96 -------aaggatgagctacttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaacac 188  Q
           ||||||||||||||||||||||||||||| ||||| |    ||||||||||||| || | ||||||||||||||||||||||||||||||| |    
T  44482403 tcagaagaaggatgagctacttcagaagaaggatgaacagattagacttctcttagaacagctgaagaagcaagcccaaccttagttgcacacccaactc 44482304  T
Q  189 tagcttgttttttacttttgttcttagtagctttatc 225  Q
    ||||||| || |||||||||||||  |||| ||||||    
T  44482303 tagcttg-ttcttacttttgttctgtgtagttttatc 44482268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 107 - 181
Target Start/End: Complemental strand, 19226208 - 19226134
Alignment:
Q  107 acttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacac 181  Q
    |||||||||||||||||| ||||| || ||||| || |||||| ||| ||||| |||| ||||||||||||||||    
T  19226208 acttcagaagaaggatgagcagattaaatatctattggaacagatgtctaagctagccaaaccttagttgcacac 19226134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 107 - 181
Target Start/End: Original strand, 30324259 - 30324333
Alignment:
Q  107 acttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacac 181  Q
    |||||||||||||||||| ||||| || ||||| || |||||| ||| ||||| |||| ||||||||||||||||    
T  30324259 acttcagaagaaggatgagcagattaaatatcttttggaacagatgtctaagctagccaaaccttagttgcacac 30324333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0133 (Bit Score: 148; Significance: 3e-78; HSPs: 1)
Name: scaffold0133
Description:

Target: scaffold0133; HSP #1
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 10 - 220
Target Start/End: Complemental strand, 32489 - 32279
Alignment:
Q  10 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaagga-aatgaagggaaaaggatgagctac 108  Q
    ||||||||||||||| ||||||||||||||| |||||||| |||||||| |||||||| |||||   |||| | | ||||| ||||||||||||||||||    
T  32489 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatttaaacgaagaatga-gggaaaaggatgagctac 32391  T
Q  109 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaacactagcttgttttttacttttg 208  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  32390 ttcaaaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactctagcttgttttttacttttg 32291  T
Q  209 ttcttagtagct 220  Q
    ||||||||||||    
T  32290 ttcttagtagct 32279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0906 (Bit Score: 139; Significance: 7e-73; HSPs: 1)
Name: scaffold0906
Description:

Target: scaffold0906; HSP #1
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 10 - 225
Target Start/End: Original strand, 3424 - 3645
Alignment:
Q  10 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaatgaagggaaaaggatgagctact 109  Q
    |||| |||||||| | ||| ||||| ||||||||||||||||| |||||||||||||||||||||||||| || |||| |||||||||||||||||||||    
T  3424 tggatatcactcccttctacccagaggaagaatacatcacaagagctgcaagaattcatgctgggcataagagaaaattaagggaaaaggatgagctact 3523  T
Q  110 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaacactagc------ttgttttttac 203  Q
    |||||||||||||||||||||||  ||||||||||| |||||||||||||||||||||||||||||||||||||||  |||||      || ||||||||    
T  3524 tcagaagaaggatgatcagatcagatatctcttagagcagttgtataagcaagcccaaccttagttgcacacccaattctagctttttttttttttttac 3623  T
Q  204 ttttgttcttagtagctttatc 225  Q
    ||||||||||||||||||||||    
T  3624 ttttgttcttagtagctttatc 3645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0105 (Bit Score: 128; Significance: 3e-66; HSPs: 1)
Name: scaffold0105
Description:

Target: scaffold0105; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 10 - 212
Target Start/End: Original strand, 46482 - 46683
Alignment:
Q  10 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaagga-aatgaagggaaaaggatgagctac 108  Q
    ||||||||||||||| |||||| |||||||| || |||||||| ||||||||||||||||||||||||  ||| | ||||| ||||||||||||||||||    
T  46482 tggacatcactcctttctatcctgaagaagagtatatcacaagagctgcaagaattcatgctgggcatgtaagaagaatga-gggaaaaggatgagctac 46580  T
Q  109 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaacactagcttgttttttacttttg 208  Q
    || ||||||| ||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  46581 ttaagaagaaagatgaacagatcaagtatctcttagaacagctgtataagcaagcccaaccttagttgcacacccaactctagcttg-tttttacttttg 46679  T
Q  209 ttct 212  Q
    ||||    
T  46680 ttct 46683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1216 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold1216
Description:

Target: scaffold1216; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 12 - 184
Target Start/End: Complemental strand, 439 - 267
Alignment:
Q  12 gacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaagga-aatgaagggaaaaggatgagctactt 110  Q
    |||| |||||||| ||||||| ||||||| ||||| ||||||||||| ||||||||||||||   |||||| | ||||| | ||||||||||||||||||    
T  439 gacaacactcctttctatccataagaagagtacattacaagggctgctagaattcatgctggatttaaaagaagaatga-gagaaaaggatgagctactt 341  T
Q  111 cagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacaccca 184  Q
    |||||||||||||| || || ||||| || || |||||  |||||||||||||| |||||||||||||||||||    
T  340 cagaagaaggatgagcaaattaagtaccttttggaacaaatgtataagcaagccaaaccttagttgcacaccca 267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0454 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0454
Description:

Target: scaffold0454; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 10 - 212
Target Start/End: Complemental strand, 2642 - 2420
Alignment:
Q  10 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaatgaag------ggaa-------- 95  Q
    ||||||||||||||| ||||||||| | ||||||||||||||| |||||||||||| ||||||||||||| ||||| | |||      ||||            
T  2642 tggacatcactcctttctatccagaggcagaatacatcacaagagctgcaagaatttatgctgggcataagaggaagttaagagagaaggaagaactact 2543  T
Q  96 -------aaggatgagctacttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaacac 188  Q
           ||||||||||||||||||||||||||||| ||||| |    |||||||||||||||| | ||||||||||||||||||||||||||||||| |    
T  2542 tcagaagaaggatgagctacttcagaagaaggatgaacagattagacttctcttagaacagttgaagaagcaagcccaaccttagttgcacacccaactc 2443  T
Q  189 tagcttgttttttacttttgttct 212  Q
    ||||||| || |||||||||||||    
T  2442 tagcttg-ttcttacttttgttct 2420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0199 (Bit Score: 62; Significance: 7e-27; HSPs: 2)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 96 - 201
Target Start/End: Complemental strand, 23892 - 23787
Alignment:
Q  96 aaggatgagctacttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaacactagcttg 195  Q
    ||||||||||||||||||||||||||||| ||||| |   |||||||||| |||||  | || ||||||||||||||||||||||||||| |||||||||    
T  23892 aaggatgagctacttcagaagaaggatgaacagattagacatctcttagagcagttaaagaaacaagcccaaccttagttgcacacccaatactagcttg 23793  T
Q  196 tttttt 201  Q
    ||||||    
T  23792 tttttt 23787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0199; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 10 - 124
Target Start/End: Complemental strand, 23999 - 23885
Alignment:
Q  10 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaatgaagggaaaaggatgagctact 109  Q
    |||| |||||||||| ||||||||| | ||| |||||||||||  |||| |||||||  ||||||||||| |||||   ||| || ||||| || |||||    
T  23999 tggatatcactcctttctatccagaggcagattacatcacaagatctgctagaattcgagctgggcataataggaagctaagagagaaggaagaactact 23900  T
Q  110 tcagaagaaggatga 124  Q
    |||  ||||||||||    
T  23899 tcatcagaaggatga 23885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 17 - 185
Target Start/End: Original strand, 52481 - 52649
Alignment:
Q  17 cactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaatgaagggaaaaggatgagctacttcagaag 116  Q
    |||||||| |||||||||||| || |||||  ||||| |||| |||||||||||||||   ||||| | |   || | ||||||||| | ||||||||||    
T  52481 cactcctttctatccagaagatgagtacatttcaaggactgctagaattcatgctgggttgaaaagtagactgagagcaaaggatgaacaacttcagaag 52580  T
Q  117 aaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaa 185  Q
    |||||||| || || |||||||| || |||||| |||||||||||| | ||||||||||||||||||||    
T  52581 aaggatgagcaaattaagtatctattggaacagatgtataagcaagtcaaaccttagttgcacacccaa 52649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0747 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0747
Description:

Target: scaffold0747; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 3629 - 3567
Alignment:
Q  12 gacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctggg 74  Q
    ||||||||||||| ||||||||||||||| ||||||||||| ||||||||||| |||||||||    
T  3629 gacatcactcctttctatccagaagaagagtacatcacaagagctgcaagaatacatgctggg 3567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0398 (Bit Score: 47; Significance: 6e-18; HSPs: 2)
Name: scaffold0398
Description:

Target: scaffold0398; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 107 - 185
Target Start/End: Original strand, 3338 - 3416
Alignment:
Q  107 acttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaa 185  Q
    |||||||||||||||||| ||||| || ||||| || |||||| ||||||||| |||| ||||||||||||||||||||    
T  3338 acttcagaagaaggatgagcagattaaatatctattggaacagatgtataagctagccaaaccttagttgcacacccaa 3416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0398; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 107 - 185
Target Start/End: Original strand, 11593 - 11671
Alignment:
Q  107 acttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaa 185  Q
    |||||||||||||||||| ||||| || ||||| || |||||| ||||||||| |||| ||||||||||||||||||||    
T  11593 acttcagaagaaggatgagcagattaaatatctattggaacagatgtataagctagccaaaccttagttgcacacccaa 11671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1002 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold1002
Description:

Target: scaffold1002; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 96 - 185
Target Start/End: Original strand, 2863 - 2952
Alignment:
Q  96 aaggatgagctacttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaa 185  Q
    |||||||| | |||||||||||||||||| ||||| || |||||  | |||||| ||| ||||| |||| ||||||||||||||||||||    
T  2863 aaggatgaacaacttcagaagaaggatgagcagattaaatatctactggaacagatgtctaagctagccaaaccttagttgcacacccaa 2952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 107 - 181
Target Start/End: Complemental strand, 23832 - 23758
Alignment:
Q  107 acttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacac 181  Q
    |||||| ||||||||||| ||||| || ||||| || |||||| ||| ||||| |||| ||||||||||||||||    
T  23832 acttcaaaagaaggatgagcagattaaatatcttttggaacagatgtctaagctagccaaaccttagttgcacac 23758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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