View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12637_low_9 (Length: 451)
Name: NF12637_low_9
Description: NF12637
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12637_low_9 |
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Alignment Details
Target: chr6 (Bit Score: 390; Significance: 0; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 390; E-Value: 0
Query Start/End: Original strand, 12 - 433
Target Start/End: Original strand, 14736151 - 14736572
Alignment:
| Q |
12 |
agagagaagtatagttaacgggaccatcaaccgggttattgggagatcgtatgcgatattaagagacttaatgaaggtattcaagtgttagtgacctaag |
111 |
Q |
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| T |
14736151 |
agagagaagtatagttaacgggaccatcaaccgggttattgggagatcgtatgcgatattcagagacttaatgaaggtattcaagtgttagtgacctaag |
14736250 |
T |
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| Q |
112 |
acagagttgtacaaataagtggattaaggaacttactaacaaatgccaaatgtattggcgtgtttggttttgtttttctccatctccgaggtgtatgagc |
211 |
Q |
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| T |
14736251 |
acagagttgtacaaataagtggattaaggaacttactaacaaatgtcagatgtattggcgtgtttggttttgtttttctctatctccgaggtgtatgagc |
14736350 |
T |
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| Q |
212 |
caccacataaatcataaccaaggaaatgtgttatggaaattattcagcttgaggaattgaagattttctgattttggaaaagcacccatttatctatcaa |
311 |
Q |
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| T |
14736351 |
caccacacaaatcataaccaagaaaatgtgttatggaaattattcagcttgaggaattgaagattttctgattttggaaaagcactcatttatctatcaa |
14736450 |
T |
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| Q |
312 |
cccaagttagatatttttgaatgctatgtcgtcaagaccaagattaggaacgtcatttaagaatattcaccgaaatttgaatatctctctaaagacttga |
411 |
Q |
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| T |
14736451 |
cccaagttagatatttttgaatgatatgtcgtcaagaccaagattaggaacgtcatttaagaatattcaccgaaatttgaatatctctctaaagacttga |
14736550 |
T |
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| Q |
412 |
ggaaagatatgaatgacacagg |
433 |
Q |
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| T |
14736551 |
ggaaagatatgaatgacacagg |
14736572 |
T |
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