View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12638_low_1 (Length: 727)

Name: NF12638_low_1
Description: NF12638
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12638_low_1
NF12638_low_1
[»] chr1 (62 HSPs)
chr1 (15-716)||(6582930-6583629)
chr1 (435-528)||(31290921-31291014)
chr1 (439-527)||(16147648-16147736)
chr1 (330-410)||(9313309-9313389)
chr1 (435-529)||(34774957-34775053)
chr1 (437-528)||(27102279-27102369)
chr1 (332-408)||(7857636-7857712)
chr1 (334-410)||(17033571-17033647)
chr1 (327-409)||(31585781-31585863)
chr1 (328-401)||(34774850-34774922)
chr1 (333-401)||(46814496-46814564)
chr1 (262-313)||(24658818-24658869)
chr1 (435-525)||(9313212-9313302)
chr1 (327-409)||(32864582-32864664)
chr1 (439-529)||(32882463-32882553)
chr1 (585-675)||(34775143-34775233)
chr1 (585-675)||(46768447-46768537)
chr1 (333-410)||(24658913-24658990)
chr1 (332-409)||(41920435-41920512)
chr1 (123-298)||(10785489-10785656)
chr1 (235-309)||(32864708-32864783)
chr1 (343-410)||(38544758-38544825)
chr1 (456-526)||(16577368-16577438)
chr1 (348-409)||(5459160-5459221)
chr1 (332-409)||(24449951-24450028)
chr1 (333-394)||(27031876-27031937)
chr1 (334-414)||(27102176-27102256)
chr1 (443-525)||(10785364-10785447)
chr1 (327-409)||(19598614-19598696)
chr1 (247-313)||(20113664-20113730)
chr1 (247-313)||(30686047-30686113)
chr1 (328-410)||(40933842-40933924)
chr1 (247-313)||(41920325-41920391)
chr1 (77-178)||(7857357-7857458)
chr1 (332-409)||(24684499-24684576)
chr1 (332-409)||(30685925-30686002)
chr1 (585-674)||(32882638-32882727)
chr1 (264-313)||(38544879-38544928)
chr1 (251-312)||(52278375-52278436)
chr1 (357-393)||(27905420-27905456)
chr1 (274-313)||(9313431-9313470)
chr1 (576-675)||(10785181-10785280)
chr1 (250-313)||(24450073-24450136)
chr1 (170-209)||(30686147-30686186)
chr1 (334-401)||(42374148-42374215)
chr1 (482-529)||(52278437-52278484)
chr1 (371-409)||(5389442-5389480)
chr1 (247-313)||(5389564-5389630)
chr1 (247-313)||(7857527-7857593)
chr1 (235-313)||(16147416-16147494)
chr1 (263-313)||(31585903-31585953)
chr1 (585-675)||(32863266-32863356)
chr1 (263-313)||(42374052-42374102)
chr1 (364-410)||(46692839-46692885)
chr1 (328-401)||(4651759-4651832)
chr1 (364-393)||(18787241-18787270)
chr1 (263-312)||(19598532-19598581)
chr1 (360-409)||(22239688-22239737)
chr1 (130-167)||(27102059-27102096)
chr1 (269-306)||(34774767-34774804)
chr1 (129-213)||(46814705-46814790)
chr1 (440-489)||(50589148-50589197)
[»] chr3 (47 HSPs)
chr3 (86-313)||(25647397-25647623)
chr3 (123-313)||(4464077-4464265)
chr3 (329-528)||(14879415-14879615)
chr3 (75-313)||(37123094-37123321)
chr3 (330-410)||(14193921-14194001)
chr3 (332-414)||(37123365-37123447)
chr3 (86-309)||(14193652-14193874)
chr3 (332-395)||(23328385-23328448)
chr3 (435-526)||(25647772-25647863)
chr3 (435-528)||(33143850-33143943)
chr3 (335-410)||(40023592-40023667)
chr3 (438-528)||(14755166-14755256)
chr3 (243-313)||(14755405-14755475)
chr3 (335-409)||(19176488-19176562)
chr3 (348-409)||(43012374-43012435)
chr3 (359-414)||(33143965-33144020)
chr3 (335-409)||(9584074-9584148)
chr3 (435-517)||(28937627-28937709)
chr3 (440-529)||(39021177-39021267)
chr3 (332-394)||(45398779-45398841)
chr3 (328-410)||(47945685-47945767)
chr3 (332-409)||(2392527-2392604)
chr3 (332-409)||(2394274-2394351)
chr3 (330-395)||(25647665-25647730)
chr3 (241-313)||(19176369-19176441)
chr3 (441-529)||(23328249-23328337)
chr3 (332-407)||(34475777-34475852)
chr3 (247-313)||(2392649-2392715)
chr3 (247-313)||(2394396-2394462)
chr3 (356-410)||(14755285-14755339)
chr3 (364-414)||(39021292-39021342)
chr3 (364-409)||(17550972-17551017)
chr3 (332-409)||(20611766-20611843)
chr3 (334-410)||(5556555-5556631)
chr3 (117-209)||(47235462-47235554)
chr3 (591-675)||(48893073-48893156)
chr3 (343-410)||(1652906-1652973)
chr3 (328-395)||(30935425-30935492)
chr3 (262-313)||(40023713-40023764)
chr3 (441-531)||(43012469-43012560)
chr3 (263-313)||(823577-823627)
chr3 (263-309)||(5556459-5556505)
chr3 (592-650)||(14194209-14194267)
chr3 (585-675)||(50518809-50518898)
chr3 (265-313)||(23328491-23328537)
chr3 (435-528)||(37123468-37123559)
chr3 (248-313)||(47235589-47235654)
[»] chr4 (48 HSPs)
chr4 (327-675)||(39420756-39421116)
chr4 (329-529)||(53823321-53823522)
chr4 (130-313)||(22811301-22811482)
chr4 (438-528)||(48098422-48098512)
chr4 (435-528)||(41117869-41117962)
chr4 (435-528)||(49528158-49528251)
chr4 (328-410)||(19815244-19815326)
chr4 (435-528)||(38637135-38637228)
chr4 (328-410)||(22811180-22811262)
chr4 (329-491)||(2061677-2061839)
chr4 (329-410)||(25753152-25753233)
chr4 (75-309)||(38639554-38639788)
chr4 (332-395)||(31050697-31050760)
chr4 (250-313)||(31050803-31050866)
chr4 (327-410)||(46698805-46698888)
chr4 (263-313)||(53823563-53823613)
chr4 (264-313)||(19672991-19673040)
chr4 (142-313)||(25752942-25753111)
chr4 (336-409)||(35800476-35800549)
chr4 (343-407)||(21387227-21387291)
chr4 (262-313)||(19815366-19815417)
chr4 (328-410)||(19673080-19673161)
chr4 (332-409)||(8255010-8255087)
chr4 (332-409)||(8268428-8268505)
chr4 (440-529)||(19815121-19815210)
chr4 (264-312)||(46698928-46698976)
chr4 (247-310)||(8254899-8254962)
chr4 (247-310)||(8268317-8268380)
chr4 (347-410)||(16501729-16501792)
chr4 (371-410)||(38637252-38637291)
chr4 (263-312)||(12296064-12296113)
chr4 (435-528)||(16832923-16833016)
chr4 (263-312)||(21988062-21988111)
chr4 (327-395)||(2825761-2825829)
chr4 (241-313)||(30964307-30964379)
chr4 (346-414)||(49747524-49747592)
chr4 (328-414)||(19311359-19311443)
chr4 (438-528)||(25753261-25753351)
chr4 (360-394)||(26474847-26474881)
chr4 (328-410)||(38929806-38929888)
chr4 (327-401)||(48098311-48098385)
chr4 (593-675)||(49747807-49747889)
chr4 (348-409)||(4305724-4305785)
chr4 (263-312)||(28966763-28966812)
chr4 (578-675)||(38636953-38637050)
chr4 (440-489)||(38929918-38929967)
chr4 (364-409)||(40813802-40813847)
chr4 (578-675)||(41117688-41117784)
[»] chr7 (53 HSPs)
chr7 (86-313)||(8744868-8745092)
chr7 (327-528)||(8745131-8745332)
chr7 (333-528)||(24324699-24324895)
chr7 (132-313)||(16954414-16954592)
chr7 (72-312)||(42533395-42533633)
chr7 (328-410)||(3478331-3478413)
chr7 (328-410)||(42533272-42533354)
chr7 (329-409)||(16954633-16954713)
chr7 (123-310)||(1320548-1320730)
chr7 (330-529)||(6716637-6716836)
chr7 (328-410)||(1320773-1320855)
chr7 (332-410)||(6584892-6584970)
chr7 (235-313)||(6716878-6716956)
chr7 (435-525)||(42533158-42533248)
chr7 (328-409)||(16828957-16829038)
chr7 (329-386)||(44755606-44755663)
chr7 (343-410)||(12480880-12480947)
chr7 (328-410)||(34389941-34390023)
chr7 (327-407)||(25160793-25160873)
chr7 (591-673)||(6492852-6492934)
chr7 (237-311)||(44755490-44755564)
chr7 (357-406)||(9349757-9349806)
chr7 (332-409)||(10244165-10244242)
chr7 (333-410)||(13311823-13311900)
chr7 (332-409)||(38306244-38306321)
chr7 (328-401)||(38485535-38485608)
chr7 (348-401)||(41089777-41089830)
chr7 (585-673)||(24324520-24324607)
chr7 (440-523)||(23983298-23983381)
chr7 (250-313)||(35745968-35746031)
chr7 (327-405)||(23983174-23983251)
chr7 (95-208)||(37794725-37794838)
chr7 (247-313)||(37794872-37794938)
chr7 (247-313)||(38306133-38306199)
chr7 (435-489)||(44755675-44755729)
chr7 (348-401)||(3419685-3419738)
chr7 (332-409)||(5860309-5860386)
chr7 (348-409)||(33435108-33435169)
chr7 (332-401)||(47325914-47325983)
chr7 (265-313)||(3478243-3478291)
chr7 (117-209)||(33434856-33434948)
chr7 (247-307)||(33434982-33435042)
chr7 (364-395)||(27993571-27993602)
chr7 (247-313)||(3419799-3419865)
chr7 (235-305)||(12480749-12480818)
chr7 (364-394)||(25153235-25153265)
chr7 (332-410)||(35745847-35745925)
chr7 (247-313)||(47326028-47326094)
chr7 (440-529)||(3478443-3478532)
chr7 (348-409)||(3867115-3867176)
chr7 (264-309)||(11379273-11379318)
chr7 (332-409)||(37794972-37795049)
chr7 (337-406)||(46133302-46133371)
[»] chr2 (53 HSPs)
chr2 (123-313)||(37770783-37770971)
chr2 (327-528)||(37770544-37770744)
chr2 (440-529)||(10173478-10173567)
chr2 (329-529)||(1269463-1269664)
chr2 (436-528)||(34230288-34230380)
chr2 (74-309)||(41086932-41087165)
chr2 (327-415)||(14106539-14106627)
chr2 (97-312)||(1269208-1269420)
chr2 (245-311)||(22885276-22885342)
chr2 (440-529)||(16952283-16952372)
chr2 (440-529)||(17022948-17023037)
chr2 (440-529)||(17060254-17060343)
chr2 (437-528)||(7696050-7696141)
chr2 (435-510)||(41086717-41086792)
chr2 (247-313)||(14106666-14106732)
chr2 (332-409)||(387156-387233)
chr2 (331-395)||(9560823-9560887)
chr2 (441-529)||(14106421-14106509)
chr2 (346-410)||(14405195-14405259)
chr2 (585-675)||(41113460-41113547)
chr2 (335-401)||(7874277-7874343)
chr2 (122-219)||(7695819-7695916)
chr2 (349-410)||(22885153-22885214)
chr2 (266-311)||(29487024-29487069)
chr2 (332-409)||(39338886-39338963)
chr2 (328-408)||(23650364-23650444)
chr2 (263-306)||(4471813-4471856)
chr2 (262-313)||(7874180-7874231)
chr2 (184-313)||(10173721-10173848)
chr2 (348-403)||(10524096-10524151)
chr2 (334-409)||(13337259-13337334)
chr2 (435-502)||(13337360-13337427)
chr2 (440-487)||(22885076-22885123)
chr2 (440-487)||(33788575-33788622)
chr2 (349-399)||(10173609-10173659)
chr2 (352-410)||(16959985-16960043)
chr2 (333-415)||(25504924-25505006)
chr2 (585-675)||(37770370-37770458)
chr2 (247-313)||(39339008-39339074)
chr2 (263-312)||(2062797-2062846)
chr2 (133-313)||(17105173-17105350)
chr2 (346-414)||(34230198-34230266)
chr2 (328-394)||(17105390-17105457)
chr2 (331-393)||(8520384-8520446)
chr2 (593-647)||(13699051-13699105)
chr2 (352-410)||(15126430-15126488)
chr2 (335-393)||(41086825-41086883)
chr2 (263-312)||(3745249-3745298)
chr2 (344-409)||(4471918-4471983)
chr2 (585-674)||(4975016-4975105)
chr2 (585-674)||(4992924-4993013)
chr2 (263-312)||(15126546-15126595)
chr2 (354-415)||(33788647-33788708)
[»] scaffold0050 (4 HSPs)
scaffold0050 (75-313)||(36407-36646)
scaffold0050 (330-409)||(36688-36767)
scaffold0050 (439-528)||(36799-36888)
scaffold0050 (585-675)||(36978-37068)
[»] chr6 (24 HSPs)
chr6 (123-313)||(20701945-20702132)
chr6 (124-311)||(3880727-3880912)
chr6 (435-528)||(3880500-3880593)
chr6 (435-528)||(20701705-20701798)
chr6 (327-390)||(3880623-3880686)
chr6 (247-313)||(15132664-15132730)
chr6 (328-407)||(32935362-32935441)
chr6 (255-313)||(16510444-16510502)
chr6 (343-407)||(26534742-26534806)
chr6 (328-410)||(20701823-20701905)
chr6 (335-401)||(34105399-34105465)
chr6 (350-415)||(9224042-9224107)
chr6 (336-407)||(26216042-26216112)
chr6 (235-305)||(9223903-9223972)
chr6 (435-489)||(15120538-15120592)
chr6 (346-395)||(21266110-21266159)
chr6 (364-395)||(7546464-7546495)
chr6 (265-312)||(13098706-13098753)
chr6 (263-306)||(15943908-15943951)
chr6 (333-392)||(16510339-16510398)
chr6 (247-313)||(3117364-3117430)
chr6 (585-647)||(17278249-17278311)
chr6 (364-409)||(3117508-3117553)
chr6 (365-394)||(13423482-13423511)
[»] chr5 (47 HSPs)
chr5 (327-410)||(7392051-7392134)
chr5 (123-315)||(14302570-14302759)
chr5 (129-313)||(7195380-7195563)
chr5 (435-528)||(8297554-8297647)
chr5 (579-675)||(30097598-30097694)
chr5 (75-313)||(26046106-26046341)
chr5 (327-525)||(7195145-7195342)
chr5 (329-410)||(13954254-13954334)
chr5 (94-313)||(13954375-13954590)
chr5 (435-530)||(7391936-7392032)
chr5 (327-411)||(14302449-14302533)
chr5 (333-395)||(26045999-26046062)
chr5 (235-313)||(7392173-7392251)
chr5 (235-313)||(8297329-8297407)
chr5 (332-409)||(698344-698421)
chr5 (435-528)||(33258784-33258877)
chr5 (329-410)||(33258902-33258983)
chr5 (348-409)||(34378097-34378158)
chr5 (334-410)||(24072286-24072362)
chr5 (327-410)||(8297446-8297529)
chr5 (435-505)||(21402761-21402832)
chr5 (241-312)||(22675456-22675527)
chr5 (335-410)||(39024470-39024545)
chr5 (328-410)||(17854087-17854169)
chr5 (435-528)||(26045866-26045959)
chr5 (598-650)||(14302188-14302240)
chr5 (435-495)||(14302365-14302425)
chr5 (460-528)||(26405447-26405515)
chr5 (334-410)||(39184207-39184283)
chr5 (344-407)||(23426339-23426402)
chr5 (333-415)||(8730901-8730983)
chr5 (356-410)||(22675344-22675398)
chr5 (264-310)||(24072411-24072457)
chr5 (598-712)||(26405226-26405344)
chr5 (349-414)||(29087481-29087546)
chr5 (359-395)||(12046265-12046301)
chr5 (261-313)||(29087367-29087419)
chr5 (591-650)||(8297749-8297808)
chr5 (578-632)||(7195063-7195117)
chr5 (440-526)||(17853971-17854056)
chr5 (247-313)||(18593115-18593181)
chr5 (328-406)||(31721656-31721734)
chr5 (348-409)||(18593242-18593303)
chr5 (331-408)||(25991989-25992066)
chr5 (598-675)||(26045683-26045760)
chr5 (585-673)||(33109922-33110007)
chr5 (617-650)||(37108103-37108136)
[»] scaffold0200 (2 HSPs)
scaffold0200 (329-529)||(19363-19564)
scaffold0200 (178-312)||(19189-19320)
[»] scaffold0063 (3 HSPs)
scaffold0063 (336-528)||(58114-58306)
scaffold0063 (236-313)||(57989-58066)
scaffold0063 (91-155)||(57913-57977)
[»] scaffold0119 (2 HSPs)
scaffold0119 (329-529)||(42038-42239)
scaffold0119 (97-312)||(42282-42494)
[»] chr8 (33 HSPs)
chr8 (75-309)||(17657147-17657382)
chr8 (331-528)||(17656904-17657101)
chr8 (468-562)||(8862469-8862563)
chr8 (328-410)||(10248573-10248655)
chr8 (245-313)||(10248695-10248763)
chr8 (327-401)||(15821408-15821482)
chr8 (332-409)||(24995416-24995493)
chr8 (328-410)||(17720726-17720807)
chr8 (247-313)||(24995538-24995604)
chr8 (328-410)||(30236148-30236230)
chr8 (335-409)||(31207383-31207457)
chr8 (328-409)||(9519478-9519559)
chr8 (349-410)||(15906686-15906747)
chr8 (332-409)||(36630820-36630897)
chr8 (578-665)||(8862352-8862439)
chr8 (585-652)||(10248309-10248376)
chr8 (246-313)||(31210333-31210400)
chr8 (327-394)||(35062435-35062502)
chr8 (456-510)||(12197988-12198042)
chr8 (456-510)||(12442416-12442470)
chr8 (327-409)||(16457482-16457563)
chr8 (343-409)||(32945724-32945790)
chr8 (332-401)||(32066324-32066393)
chr8 (332-393)||(34389042-34389103)
chr8 (86-213)||(10248791-10248918)
chr8 (247-313)||(9519371-9519437)
chr8 (435-489)||(10248494-10248548)
chr8 (344-406)||(10552263-10552325)
chr8 (247-313)||(34389148-34389214)
chr8 (247-313)||(36630709-36630775)
chr8 (440-489)||(17720647-17720696)
chr8 (332-409)||(37986879-37986956)
chr8 (247-312)||(37987002-37987067)
[»] scaffold1613 (2 HSPs)
scaffold1613 (343-410)||(1037-1104)
scaffold1613 (264-313)||(1158-1207)
[»] scaffold1384 (1 HSPs)
scaffold1384 (578-674)||(1372-1472)
[»] scaffold0062 (1 HSPs)
scaffold0062 (328-394)||(47072-47138)
[»] scaffold0068 (1 HSPs)
scaffold0068 (332-401)||(35800-35869)


Alignment Details
Target: chr1 (Bit Score: 515; Significance: 0; HSPs: 62)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 515; E-Value: 0
Query Start/End: Original strand, 15 - 716
Target Start/End: Complemental strand, 6583629 - 6582930
Alignment:
Q  15 aatcacatctagactgagctatttggagactttggaaaattgccaataatttagcaa--gtagcctctggtattcggatccttgttcgtagtcagtaact 112  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||  ||||  |||||||||||||| |||||||||||||| |||||    
T  6583629 aatcacatctagactgaactatttggagactttggaaaattgccaataatttagcaatagtagtatctggtattcggattcttgttcgtagtcactaact 6583530  T
Q  113 cttgttgtggtttttagggttgttaaggtgtttagggtgtttgaaggaagtgggtctcgttgtgttgagctttttccttttgatcagtttgttgtttgca 212  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||    
T  6583529 cttgttgtggttattagggttgttaaggtgtttagggtgtttgaaggaagtgggtctcgttgtgttgagtttttttcttttgatcagtttgttgtttgca 6583430  T
Q  213 cgaccgcatatatatcacgtcgttgtcatactttttgtgtgttggttgtcggtgggccggttacttttgcttcaagatcgggagtcggtgtctagctgca 312  Q
    | |||||||||    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  6583429 ccaccgcatat----cacgtcgttgtcatactttttgtgtgttggttgtcggtgggccggttacttttgcttcgagatcgggagtcggtgtctagctgca 6583334  T
Q  313 agcgtgatttgtcaagggtgaggggtgcctttctgatttggtcctaaagtttggtggaccgatcacttttgattcgagatcggcagtcaattctttggat 412  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  6583333 agcgtgatttgtcaagggtgaggggtgcctttctgatttggtcctaaagtctggtggaccgatcacttttgattcgagatcggcagtcaattctttggat 6583234  T
Q  413 cagnnnnnnnnnnnnnnnnnnnatggtttctttcggtgaatcagaggtcgagaggtggtggaagttgattgatctttcagataggagcttttcggatgcg 512  Q
    |||                   |||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  6583233 cagttttggttttttgctttttatggtttctttcggtgaatcggaggtcgagaggtggtggaagctgattgatctttcagataggagcttttcggatgcg 6583134  T
Q  513 gctcagctttggtgttgggtgtttttctttgggggtgagtaatgacgacgagtgaggttgggtatgttgttctcgtgtaggagtatgttttaggtggtaa 612  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||  |||||||||||||||||||||||||||| ||||||||||||| |    
T  6583133 gctcagctttggtgttgggtgtttttctttgggggtgagtaatgacaacgagtggtgttgggtatgttgttctcgtgtaggagtctgttttaggtggtga 6583034  T
Q  613 cgtatattttggtgggtgttatcatcatgggtgttttttatagtatttattttcgggtgttccactttatagccttttgtttatattcctagtttcaccg 712  Q
    ||| ||||||||||||||||||||||||| ||||||||||| || |||||||||||||||||| |  ||||||||||||||||||||||||||||||| |    
T  6583033 cgtgtattttggtgggtgttatcatcatgagtgttttttatggtgtttattttcgggtgttccgccgtatagccttttgtttatattcctagtttcactg 6582934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 435 - 528
Target Start/End: Complemental strand, 31291014 - 31290921
Alignment:
Q  435 atggtttctttcggtgaatcagaggtcgagaggtggtggaagttgattgatctttcagataggagcttttcggatgcggctcagctttggtgtt 528  Q
    |||||||||||||||| ||| |||||||||||||||||||||||| |||||||||| ||||||||||||||||||| |||||||||||||||||    
T  31291014 atggtttctttcggtggatcggaggtcgagaggtggtggaagttgcttgatctttcggataggagcttttcggatgtggctcagctttggtgtt 31290921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 439 - 527
Target Start/End: Original strand, 16147648 - 16147736
Alignment:
Q  439 tttctttcggtgaatcagaggtcgagaggtggtggaagttgattgatctttcagataggagcttttcggatgcggctcagctttggtgt 527  Q
    |||||||||||  ||| ||||| ||||||||||| ||||||| |||||||||||||| |||||||||||||| ||||||||||||||||    
T  16147648 tttctttcggtagatcggaggtggagaggtggtgaaagttgaatgatctttcagatatgagcttttcggatgtggctcagctttggtgt 16147736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 330 - 410
Target Start/End: Complemental strand, 9313389 - 9313309
Alignment:
Q  330 gtgaggggtgcctttctgatttggtcctaaagtttggtggaccgatcacttttgattcgagatcggcagtcaattctttgg 410  Q
    |||||||||||| |||||||||||||||||||| | |||| | ||||||||||||||||||||||| ||||| ||||||||    
T  9313389 gtgaggggtgcccttctgatttggtcctaaagtctagtgggctgatcacttttgattcgagatcgggagtcagttctttgg 9313309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 435 - 529
Target Start/End: Original strand, 34774957 - 34775053
Alignment:
Q  435 atggtttctttcggtgaatcagaggtcgagaggtggtggaagttgattga-tctttcagataggagctttt-cggatgcggctcagctttggtgttg 529  Q
    |||||||||||||||||||  ||||| ||||||||||||||| ||||||| | ||||||||||||| |||| |||||| ||||||||||||||||||    
T  34774957 atggtttctttcggtgaattggaggttgagaggtggtggaagctgattgattgtttcagataggagtttttccggatgtggctcagctttggtgttg 34775053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 437 - 528
Target Start/End: Original strand, 27102279 - 27102369
Alignment:
Q  437 ggtttctttcggtgaatcagaggtcgagaggtggtggaagttgattgatctttcagataggagcttttcggatgcggctcagctttggtgtt 528  Q
    |||||||||||||| ||| ||||||||||||||||||||| ||| ||||||||||||||||||| |||| | || ||||||||||| |||||    
T  27102279 ggtttctttcggtggatcggaggtcgagaggtggtggaagctgaatgatctttcagataggagcgtttc-gttgtggctcagctttagtgtt 27102369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 332 - 408
Target Start/End: Original strand, 7857636 - 7857712
Alignment:
Q  332 gaggggtgcctttctgatttggtcctaaagtttggtggaccgatcacttttgattcgagatcggcagtcaattcttt 408  Q
    |||||||||| | |||||||||| ||||||| |||||| ||||||||||||||||||||||||| |||||| |||||    
T  7857636 gaggggtgccctgctgatttggttctaaagtctggtgggccgatcacttttgattcgagatcgggagtcaactcttt 7857712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 334 - 410
Target Start/End: Original strand, 17033571 - 17033647
Alignment:
Q  334 ggggtgcctttctgatttggtcctaaagtttggtggaccgatcacttttgattcgagatcggcagtcaattctttgg 410  Q
    |||||||| |||||||||||||||| ||| |||||| |||||||||||||| |||||||||| ||||| ||||||||    
T  17033571 ggggtgcccttctgatttggtcctatagtctggtgggccgatcacttttgaatcgagatcgggagtcagttctttgg 17033647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 327 - 409
Target Start/End: Complemental strand, 31585863 - 31585781
Alignment:
Q  327 agggtgaggggtgcctttctgatttggtcctaaagtttggtggaccgatcacttttgattcgagatcggcagtcaattctttg 409  Q
    ||||||||||||||| | || ||||||| ||| ||| |||||| ||||||||||||||||||||||||| ||||| |||||||    
T  31585863 agggtgaggggtgccctgctaatttggtactatagtctggtgggccgatcacttttgattcgagatcgggagtcagttctttg 31585781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 328 - 401
Target Start/End: Original strand, 34774850 - 34774922
Alignment:
Q  328 gggtgaggggtgcctttctgatttggtcctaaagtttggtggaccgatcacttttgattcgagatcggcagtca 401  Q
    ||||||| |||||| ||||||||||||||||| || ||||||||||||||||||||| |||||||||| |||||    
T  34774850 gggtgagtggtgcccttctgatttggtcctaacgtctggtggaccgatcacttttga-tcgagatcgggagtca 34774922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 333 - 401
Target Start/End: Complemental strand, 46814564 - 46814496
Alignment:
Q  333 aggggtgcctttctgatttggtcctaaagtttggtggaccgatcacttttgattcgagatcggcagtca 401  Q
    ||||||||| | |||||||||| ||||||| |||||| ||||||||||||||||||||||||| |||||    
T  46814564 aggggtgccctgctgatttggttctaaagtctggtgggccgatcacttttgattcgagatcgggagtca 46814496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 262 - 313
Target Start/End: Original strand, 24658818 - 24658869
Alignment:
Q  262 cggtgggccggttacttttgcttcaagatcgggagtcggtgtctagctgcaa 313  Q
    |||||||||||||| ||||||||||||||||||||| |||||||||||||||    
T  24658818 cggtgggccggttatttttgcttcaagatcgggagttggtgtctagctgcaa 24658869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 435 - 525
Target Start/End: Complemental strand, 9313302 - 9313212
Alignment:
Q  435 atggtttctttcggtgaatcagaggtcgagaggtggtggaagttgattgatctttcagataggagcttttcggatgcggctcagctttggt 525  Q
    |||||||||||||||| ||| ||||| || ||||||||| |||||  ||||| |||| ||| ||| |||||||||| ||||||||||||||    
T  9313302 atggtttctttcggtggatcggaggtggataggtggtggcagttgtatgatccttcaaatacgagtttttcggatgtggctcagctttggt 9313212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 327 - 409
Target Start/End: Complemental strand, 32864664 - 32864582
Alignment:
Q  327 agggtgaggggtgcctttctgatttggtcctaaagtttggtggaccgatcacttttgattcgagatcggcagtcaattctttg 409  Q
    ||||||||||||||| ||| |||||||||||||||  |||||| || ||||||||| |||||||||||| ||||  |||||||    
T  32864664 agggtgaggggtgcccttccgatttggtcctaaaggctggtgggccaatcacttttaattcgagatcggaagtcggttctttg 32864582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 439 - 529
Target Start/End: Original strand, 32882463 - 32882553
Alignment:
Q  439 tttctttcggtgaatcagaggtcgagaggtggtggaagttgattgatctttcagataggagcttttcggatgcggctcagctttggtgttg 529  Q
    |||||||||||||||| ||| |||| |||||||| ||| | | ||||||||| |  |||||||||||| ||| ||||||||||||||||||    
T  32882463 tttctttcggtgaatcggagatcgacaggtggtgaaagcttaatgatctttcggtcaggagcttttcgaatgtggctcagctttggtgttg 32882553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 585 - 675
Target Start/End: Original strand, 34775143 - 34775233
Alignment:
Q  585 tcgtgtaggagtatgttttaggtggtaacgtatattttggtgggtgttatcatcatgggtgttttttatagtatttattttcgggtgttcc 675  Q
    ||||| |||||| ||||||||||| | |||| |||||||||||||||| || |||| ||| |||||||  || ||||||||||||||||||    
T  34775143 tcgtgaaggagtctgttttaggtgatgacgtgtattttggtgggtgttgtcctcattggtattttttaaggtgtttattttcgggtgttcc 34775233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 585 - 675
Target Start/End: Original strand, 46768447 - 46768537
Alignment:
Q  585 tcgtgtaggagtatgttttaggtggtaacgtatattttggtgggtgttatcatcatgggtgttttttatagtatttattttcgggtgttcc 675  Q
    ||||| |||||| ||||||||||||| ||||  ||||||||||||||| || ||  ||||||||||||  || ||||||||||||||||||    
T  46768447 tcgtgaaggagtctgttttaggtggtgacgtgaattttggtgggtgttgtcctcgggggtgttttttagggtgtttattttcgggtgttcc 46768537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 333 - 410
Target Start/End: Original strand, 24658913 - 24658990
Alignment:
Q  333 aggggtgcctttctgatttggtcctaaagtttggtggaccgatcacttttgattcgagatcggcagtcaattctttgg 410  Q
    ||||||||| | |||||||||| ||||||| |||||| || |||||||||||||||||||||| |||||  |||||||    
T  24658913 aggggtgccctgctgatttggttctaaagtctggtgggccaatcacttttgattcgagatcgggagtcagctctttgg 24658990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 332 - 409
Target Start/End: Original strand, 41920435 - 41920512
Alignment:
Q  332 gaggggtgcctttctgatttggtcctaaagtttggtggaccgatcacttttgattcgagatcggcagtcaattctttg 409  Q
    |||||||||| | || ||||||| ||| ||| |||||| ||||||||||||||||||||||||| ||||| |||||||    
T  41920435 gaggggtgccctgctaatttggtactacagtctggtgggccgatcacttttgattcgagatcgggagtcagttctttg 41920512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 123 - 298
Target Start/End: Complemental strand, 10785656 - 10785489
Alignment:
Q  123 tttttagggttgttaaggtgtttagggtgtttgaaggaagtgggtctcgttgtgttgagctttttccttttgatcagtttgttgtttgcacgaccgcata 222  Q
    ||||| ||||||||||||||||||||||||||| ||| ||  |||| | ||| | ||||| ||||||||||||||     |||||||||||  |||| ||    
T  10785656 tttttggggttgttaaggtgtttagggtgtttggagggagcaggtcccattgagctgagccttttccttttgatc-----gttgtttgcacccccgccta 10785562  T
Q  223 tatatcacgtcgttgtcatactttttgtgtgttggttgtcggtgggccggttacttttgcttcaagatcgggagtc 298  Q
    | | |   ||  ||||| |||| |||||||| |||||  |||||||||||||| ||||||||| ||||||||||||    
T  10785561 tct-tgtggt--ttgtcttactgtttgtgtgctggtttccggtgggccggttaattttgcttcgagatcgggagtc 10785489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 235 - 309
Target Start/End: Complemental strand, 32864783 - 32864708
Alignment:
Q  235 ttgtcatactttttgtgtgttggttgtc-ggtgggccggttacttttgcttcaagatcgggagtcggtgtctagct 309  Q
    ||||||||| ||||||||| | ||| || ||||||||||||||||||||||| | ||| |||||||||||||||||    
T  32864783 ttgtcatacgttttgtgtgctagttttccggtgggccggttacttttgcttcgaaatcaggagtcggtgtctagct 32864708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 343 - 410
Target Start/End: Complemental strand, 38544825 - 38544758
Alignment:
Q  343 ttctgatttggtcctaaagtttggtggaccgatcacttttgattcgagatcggcagtcaattctttgg 410  Q
    ||||||||||||| | |||| |||||| |||||| |||||||||||||||||| ||||| ||||||||    
T  38544825 ttctgatttggtcatgaagtctggtgggccgatcgcttttgattcgagatcgggagtcagttctttgg 38544758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 456 - 526
Target Start/End: Original strand, 16577368 - 16577438
Alignment:
Q  456 gaggtcgagaggtggtggaagttgattgatctttcagataggagcttttcggatgcggctcagctttggtg 526  Q
    ||||| ||||||||||||||| ||| ||||||||   |||||||||||||||||| |||||| ||||||||    
T  16577368 gaggttgagaggtggtggaagctgaatgatctttggaataggagcttttcggatgtggctcaactttggtg 16577438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 348 - 409
Target Start/End: Original strand, 5459160 - 5459221
Alignment:
Q  348 atttggtcctaaagtttggtggaccgatcacttttgattcgagatcggcagtcaattctttg 409  Q
    ||||||| ||| ||| |||||| ||||||||||||||||||||||||| |||||||| ||||    
T  5459160 atttggtgctatagtctggtgggccgatcacttttgattcgagatcgggagtcaattatttg 5459221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 332 - 409
Target Start/End: Complemental strand, 24450028 - 24449951
Alignment:
Q  332 gaggggtgcctttctgatttggtcctaaagtttggtggaccgatcacttttgattcgagatcggcagtcaattctttg 409  Q
    |||||||||| | ||  |||||| ||| |||||||||| |||||||||||||||| |||||||| ||||| |||||||    
T  24450028 gaggggtgccctgctattttggtactatagtttggtgggccgatcacttttgatttgagatcggaagtcagttctttg 24449951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 333 - 394
Target Start/End: Complemental strand, 27031937 - 27031876
Alignment:
Q  333 aggggtgcctttctgatttggtcctaaagtttggtggaccgatcacttttgattcgagatcg 394  Q
    ||||||||| | |||||||||| ||||||| | |||| ||||||||||||||||||||||||    
T  27031937 aggggtgccctgctgatttggttctaaagtctagtgggccgatcacttttgattcgagatcg 27031876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 334 - 414
Target Start/End: Original strand, 27102176 - 27102256
Alignment:
Q  334 ggggtgcctttctgatttggtcctaaagtttggtggaccgatcacttttgattcgagatcggcagtcaattctttggatca 414  Q
    |||||||| ||||| |||||||  ||||| |   || ||||||||||||||||||||||||| ||||| ||||||||||||    
T  27102176 ggggtgcccttctgttttggtctcaaagtctaacgggccgatcacttttgattcgagatcgggagtcagttctttggatca 27102256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 443 - 525
Target Start/End: Complemental strand, 10785447 - 10785364
Alignment:
Q  443 tttcggtgaatcagaggtcgagaggtggtggaagttgattgatctt-tcagataggagcttttcggatgcggctcagctttggt 525  Q
    ||||||||  || ||||||| ||||||||||||| ||| |||| || || |||||||||||||||| |||||||| ||||||||    
T  10785447 tttcggtggttcggaggtcgcgaggtggtggaagctgaatgattttctctgataggagcttttcgggtgcggctctgctttggt 10785364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 327 - 409
Target Start/End: Original strand, 19598614 - 19598696
Alignment:
Q  327 agggtgaggggtgcctttctgatttggtcctaaagtttggtggaccgatcacttttgattcgagatcggcagtcaattctttg 409  Q
    ||||| |||||||||  |||| || |||||| |||| |||||| |||||| |||||||||||||||||  ||||| |||||||    
T  19598614 agggtaaggggtgcccgtctggttgggtcctgaagtctggtgggccgatcgcttttgattcgagatcgagagtcagttctttg 19598696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 247 - 313
Target Start/End: Complemental strand, 20113730 - 20113664
Alignment:
Q  247 ttgtgtgttggttgtcggtgggccggttacttttgcttcaagatcgggagtcggtgtctagctgcaa 313  Q
    ||||||| | ||| ||||||||||||||  ||| ||||| |||||||||||||| ||||||||||||    
T  20113730 ttgtgtgctagttttcggtgggccggttcatttggcttcgagatcgggagtcggggtctagctgcaa 20113664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 247 - 313
Target Start/End: Complemental strand, 30686113 - 30686047
Alignment:
Q  247 ttgtgtgttggttgtcggtgggccggttacttttgcttcaagatcgggagtcggtgtctagctgcaa 313  Q
    ||||||||||||| ||||||||||||||  ||| ||||| |||||||||||||  ||||| ||||||    
T  30686113 ttgtgtgttggttttcggtgggccggttcatttggcttcgagatcgggagtcgaggtctaactgcaa 30686047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 328 - 410
Target Start/End: Original strand, 40933842 - 40933924
Alignment:
Q  328 gggtgaggggtgcctttctgatttggtcctaaagtttggtggaccgatcacttttgattcgagatcggcagtcaattctttgg 410  Q
    |||||||||||| | | ||| |||||| | ||||||||||| ||||||| ||||||||| |||||||| ||||| || |||||    
T  40933842 gggtgaggggtgtcctcctgttttggttcgaaagtttggtgaaccgatcgcttttgatttgagatcggaagtcagttatttgg 40933924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 247 - 313
Target Start/End: Original strand, 41920325 - 41920391
Alignment:
Q  247 ttgtgtgttggttgtcggtgggccggttacttttgcttcaagatcgggagtcggtgtctagctgcaa 313  Q
    ||||||| | ||| ||||||||||||||  ||| ||||| |||||||||||||| ||||||||||||    
T  41920325 ttgtgtgctagttttcggtgggccggttcatttggcttcgagatcgggagtcggggtctagctgcaa 41920391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 77 - 178
Target Start/End: Original strand, 7857357 - 7857458
Alignment:
Q  77 ctctggtattcggatccttgttcgtagtcagtaactcttgttgtggtttttagggttgttaaggtgtttagggtgtttgaaggaagtgggtctcgttgtg 176  Q
    ||||| || |||| ||| ||||||| |||| || ||||||||   || ||| ||||||| ||||||||||||||||||| ||| |||| ||| |||||||    
T  7857357 ctctgttactcgggtccatgttcgtcgtcactagctcttgtttgcgtctttggggttgtcaaggtgtttagggtgtttggagggagtgtgtcccgttgtg 7857456  T
Q  177 tt 178  Q
    ||    
T  7857457 tt 7857458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 332 - 409
Target Start/End: Complemental strand, 24684576 - 24684499
Alignment:
Q  332 gaggggtgcctttctgatttggtcctaaagtttggtggaccgatcacttttgattcgagatcggcagtcaattctttg 409  Q
    |||||||||| | || ||||| | ||||||| |||||| |||||||||||| ||||||||||||  |||| |||||||    
T  24684576 gaggggtgccctactaatttgattctaaagtctggtgggccgatcacttttaattcgagatcggatgtcagttctttg 24684499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 332 - 409
Target Start/End: Complemental strand, 30686002 - 30685925
Alignment:
Q  332 gaggggtgcctttctgatttggtcctaaagtttggtggaccgatcacttttgattcgagatcggcagtcaattctttg 409  Q
    |||||||||| | || ||||||| ||| ||| | |||| |||||||||||||||| |||||||| ||||| |||||||    
T  30686002 gaggggtgccctgctaatttggtactatagtcttgtgggccgatcacttttgatttgagatcgggagtcagttctttg 30685925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 585 - 674
Target Start/End: Original strand, 32882638 - 32882727
Alignment:
Q  585 tcgtgtaggagtatgttttaggtggtaacgtatattttggtgggtgttatcatcatgggtgttttttatagtatttattttcgggtgttc 674  Q
    ||||| ||||||  |||||||| ||| | ||||||||||||||||||| || ||  |||||| |||||  || |||||||||||||||||    
T  32882638 tcgtgaaggagtcagttttaggcggtgatgtatattttggtgggtgttgtcctcgggggtgtcttttagggtgtttattttcgggtgttc 32882727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 264 - 313
Target Start/End: Complemental strand, 38544928 - 38544879
Alignment:
Q  264 gtgggccggttacttttgcttcaagatcgggagtcggtgtctagctgcaa 313  Q
    |||||||| ||||||||||||| |||| |||||| |||||||||||||||    
T  38544928 gtgggccgattacttttgcttcgagattgggagttggtgtctagctgcaa 38544879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 251 - 312
Target Start/End: Original strand, 52278375 - 52278436
Alignment:
Q  251 gtgttggttgtcggtgggccggttacttttgcttcaagatcgggagtcggtgtctagctgca 312  Q
    ||||||||| ||||||| ||| ||||||||||||| ||| | |||| |||||||||||||||    
T  52278375 gtgttggttttcggtggaccgattacttttgcttcgagaccaggagccggtgtctagctgca 52278436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 357 - 393
Target Start/End: Original strand, 27905420 - 27905456
Alignment:
Q  357 taaagtttggtggaccgatcacttttgattcgagatc 393  Q
    |||||| ||||||||||||||||||||||||||||||    
T  27905420 taaagtctggtggaccgatcacttttgattcgagatc 27905456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 274 - 313
Target Start/End: Complemental strand, 9313470 - 9313431
Alignment:
Q  274 tacttttgcttcaagatcgggagtcggtgtctagctgcaa 313  Q
    |||||||||||| ||||||||||| |||||||||||||||    
T  9313470 tacttttgcttcgagatcgggagttggtgtctagctgcaa 9313431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 576 - 675
Target Start/End: Complemental strand, 10785280 - 10785181
Alignment:
Q  576 atgttgttctcgtgtaggagtatgttttaggtggtaacgtatattttggtgggtgttatcatcatgggtgttttttatagtatttattttcgggtgttcc 675  Q
    |||| ||| ||||| |||||| ||||||| ||| |||| | ||||||| |||||||| || ||| ||||||||||||  || ||||| || |||||||||    
T  10785280 atgtcgttttcgtgaaggagtctgttttaagtgataacatgtattttgatgggtgttgtcctcaagggtgttttttaaggtgtttatatttgggtgttcc 10785181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 250 - 313
Target Start/End: Complemental strand, 24450136 - 24450073
Alignment:
Q  250 tgtgttggttgtcggtgggccggttacttttgcttcaagatcgggagtcggtgtctagctgcaa 313  Q
    |||||||||| ||| ||||||| ||  ||| ||||| |||||||||||||| ||||||||||||    
T  24450136 tgtgttggttttcgatgggccgattcatttggcttcgagatcgggagtcggggtctagctgcaa 24450073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 209
Target Start/End: Complemental strand, 30686186 - 30686147
Alignment:
Q  170 cgttgtgttgagctttttccttttgatcagtttgttgttt 209  Q
    ||||||||||||| |||||||||||||| |||||||||||    
T  30686186 cgttgtgttgagccttttccttttgatctgtttgttgttt 30686147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 334 - 401
Target Start/End: Original strand, 42374148 - 42374215
Alignment:
Q  334 ggggtgcctttctgatttggtcctaaagtttggtggaccgatcacttttgattcgagatcggcagtca 401  Q
    |||||||| ||||||||||||| |   || ||||||||||||| ||||||||| |||||||| |||||    
T  42374148 ggggtgcccttctgatttggtcatgttgtctggtggaccgatcgcttttgatttgagatcgggagtca 42374215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 482 - 529
Target Start/End: Original strand, 52278437 - 52278484
Alignment:
Q  482 tgatctttcagataggagcttttcggatgcggctcagctttggtgttg 529  Q
    |||||||||||||||||| |||||||||| |||||| ||||| |||||    
T  52278437 tgatctttcagataggagtttttcggatgtggctcaactttgatgttg 52278484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 371 - 409
Target Start/End: Complemental strand, 5389480 - 5389442
Alignment:
Q  371 ccgatcacttttgattcgagatcggcagtcaattctttg 409  Q
    ||||||||||||||||||||||||| ||||| |||||||    
T  5389480 ccgatcacttttgattcgagatcgggagtcagttctttg 5389442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 247 - 313
Target Start/End: Complemental strand, 5389630 - 5389564
Alignment:
Q  247 ttgtgtgttggttgtcggtgggccggttacttttgcttcaagatcgggagtcggtgtctagctgcaa 313  Q
    ||||||| ||||| || |||||||||||  ||| ||||| |||||||||||| | ||||||||||||    
T  5389630 ttgtgtgctggttttcagtgggccggttcatttggcttcgagatcgggagtccgggtctagctgcaa 5389564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 247 - 313
Target Start/End: Original strand, 7857527 - 7857593
Alignment:
Q  247 ttgtgtgttggttgtcggtgggccggttacttttgcttcaagatcgggagtcggtgtctagctgcaa 313  Q
    ||||||| |||||  | |||||||| ||| ||||||||| ||||||||||| ||||||||| |||||    
T  7857527 ttgtgtgctggtttccagtgggccgattatttttgcttcgagatcgggagttggtgtctagttgcaa 7857593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 235 - 313
Target Start/End: Original strand, 16147416 - 16147494
Alignment:
Q  235 ttgtcatactttttgtgtgttggttgtcggtgggccggttacttttgcttcaagatcgggagtcggtgtctagctgcaa 313  Q
    ||||| ||||| ||||||||| | |  |||||||||| ||||||||  ||| ||||||||||||  |||||||||||||    
T  16147416 ttgtcttacttattgtgtgttaggttccggtgggccgattacttttagttcgagatcgggagtcactgtctagctgcaa 16147494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 263 - 313
Target Start/End: Complemental strand, 31585953 - 31585903
Alignment:
Q  263 ggtgggccggttacttttgcttcaagatcgggagtcggtgtctagctgcaa 313  Q
    ||||||||||||  ||| ||||| |||||||||||||| ||||||||||||    
T  31585953 ggtgggccggttcatttggcttcgagatcgggagtcggggtctagctgcaa 31585903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 585 - 675
Target Start/End: Complemental strand, 32863356 - 32863266
Alignment:
Q  585 tcgtgtaggagtatgttttaggtggtaacgtatattttggtgggtgttatcatcatgggtgttttttatagtatttattttcgggtgttcc 675  Q
    ||||| |||| | ||||||||| ||| |||| ||| |||||||||||| || || |||||||||||  | || ||||||||| ||||||||    
T  32863356 tcgtggaggattctgttttaggcggtgacgtgtatgttggtgggtgttgtcctcttgggtgtttttcttggtgtttattttcaggtgttcc 32863266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 263 - 313
Target Start/End: Original strand, 42374052 - 42374102
Alignment:
Q  263 ggtgggccggttacttttgcttcaagatcgggagtcggtgtctagctgcaa 313  Q
    ||||| ||||||||||||| ||| |||||||||||| |||||||| |||||    
T  42374052 ggtggaccggttacttttgattcgagatcgggagtcagtgtctagttgcaa 42374102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 364 - 410
Target Start/End: Complemental strand, 46692885 - 46692839
Alignment:
Q  364 tggtggaccgatcacttttgattcgagatcggcagtcaattctttgg 410  Q
    |||||| ||||||||||||||||||||||||| ||| | ||||||||    
T  46692885 tggtgggccgatcacttttgattcgagatcgggagttagttctttgg 46692839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 328 - 401
Target Start/End: Original strand, 4651759 - 4651832
Alignment:
Q  328 gggtgaggggtgcctttctgatttggtcctaaagtttggtggaccgatcacttttgattcgagatcggcagtca 401  Q
    |||| ||||||||| |||||| || || |  |||| ||| || ||||||||||||||||||||||||| |||||    
T  4651759 gggtaaggggtgcccttctgaatttgttccgaagtctggggggccgatcacttttgattcgagatcgggagtca 4651832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 364 - 393
Target Start/End: Complemental strand, 18787270 - 18787241
Alignment:
Q  364 tggtggaccgatcacttttgattcgagatc 393  Q
    ||||||||||||||||||||||||||||||    
T  18787270 tggtggaccgatcacttttgattcgagatc 18787241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 263 - 312
Target Start/End: Original strand, 19598532 - 19598581
Alignment:
Q  263 ggtgggccggttacttttgcttcaagatcgggagtcggtgtctagctgca 312  Q
    ||||||||||||||||||||||| ||||| | ||| || |||||||||||    
T  19598532 ggtgggccggttacttttgcttcgagatcagaagttggcgtctagctgca 19598581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 360 - 409
Target Start/End: Original strand, 22239688 - 22239737
Alignment:
Q  360 agtttggtggaccgatcacttttgattcgagatcggcagtcaattctttg 409  Q
    |||||| ||||||||||||||||||||| ||||||  ||||||| |||||    
T  22239688 agtttgatggaccgatcacttttgattcaagatcgagagtcaatgctttg 22239737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 167
Target Start/End: Original strand, 27102059 - 27102096
Alignment:
Q  130 ggttgttaaggtgtttagggtgtttgaaggaagtgggt 167  Q
    |||||||||||||||||||||||||| |||||| ||||    
T  27102059 ggttgttaaggtgtttagggtgtttggaggaagcgggt 27102096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 269 - 306
Target Start/End: Original strand, 34774767 - 34774804
Alignment:
Q  269 ccggttacttttgcttcaagatcgggagtcggtgtcta 306  Q
    ||||||||||||||||| ||| ||||||||||||||||    
T  34774767 ccggttacttttgcttcgagaacgggagtcggtgtcta 34774804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 213
Target Start/End: Complemental strand, 46814790 - 46814705
Alignment:
Q  129 gggttgttaaggtgtttagggtgtttgaaggaagtgggtctcgttgt-gttgagctttttccttttgatcagtttgttgtttgcac 213  Q
    |||||||| |||||||||||||||||| |||  | | ||| |||||| ||||||| |||||||| |||  | ||||||||||||||    
T  46814790 gggttgtttaggtgtttagggtgtttggagggtgcgtgtcccgttgtggttgagccttttccttgtgactattttgttgtttgcac 46814705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 440 - 489
Target Start/End: Complemental strand, 50589197 - 50589148
Alignment:
Q  440 ttctttcggtgaatcagaggtcgagaggtggtggaagttgattgatcttt 489  Q
    ||||||||||| | ||||||| | |||||||| |||||||||||||||||    
T  50589197 ttctttcggtggaccagaggttgtgaggtggtagaagttgattgatcttt 50589148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 94; Significance: 2e-45; HSPs: 47)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 86 - 313
Target Start/End: Original strand, 25647397 - 25647623
Alignment:
Q  86 tcggatccttgttcgtagtcagtaactcttgtt-gtggtttttagggttgttaaggtgtttagggtgtttgaaggaagtgggtctcgttgtgttgagctt 184  Q
    |||| ||||||||||| |||| || |||||||| ||| |||||| |||||||||||||||||||||||||| |||||| | ||| ||||| |||| || |    
T  25647397 tcgggtccttgttcgtcgtcactagctcttgttcgtgatttttaaggttgttaaggtgtttagggtgtttggaggaagcgagtcccgttgagttgtgcct 25647496  T
Q  185 tttccttttgatcagtttgttgtttgcacgaccgcatatatatcacgtcg-ttgtcatac-tttttgtgtgttggttgtcggtgggccggttacttttgc 282  Q
    ||||||||||| | ||||||||||||||| ||    | ||||||| |||| ||||||| | ||||||||||||||||  || ||||||||||||||||||    
T  25647497 tttccttttgacctgtttgttgtttgcaccac----tgtatatcatgtcgtttgtcattcttttttgtgtgttggtttccgatgggccggttacttttgc 25647592  T
Q  283 ttcaagatcgggagtcggtgtctagctgcaa 313  Q
    ||| ||| |||||||||||||||||||||||    
T  25647593 ttcgagaacgggagtcggtgtctagctgcaa 25647623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 123 - 313
Target Start/End: Complemental strand, 4464265 - 4464077
Alignment:
Q  123 tttttagggttgttaaggtgtttagggtgtttgaaggaagtgggtctcgttgtgttgagctttttccttttgatcagtttgttgtttgcacgaccgcata 222  Q
    ||||| |||||||| ||||||||| || ||||| |||| | ||||  | || || |||||||||||||||||||| ||||||||||||||| ||||| ||    
T  4464265 tttttggggttgtttaggtgtttatggagtttggagga-gcgggttcctttctgctgagctttttccttttgatcggtttgttgtttgcaccaccgctta 4464167  T
Q  223 tatatcacgtcgttgtcatactttttgtgtgttggttgt-cggtgggccggttacttttgcttcaagatcgggagtcggtgtctagctgcaa 313  Q
    | | |  |||  ||||||| ||||||||||||||||| | |||||||||||||||||||||||| ||||||||||||||||||||| |||||    
T  4464166 tct-tgtcgtt-ttgtcatcctttttgtgtgttggtttttcggtgggccggttacttttgcttcgagatcgggagtcggtgtctagttgcaa 4464077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 329 - 528
Target Start/End: Original strand, 14879415 - 14879615
Alignment:
Q  329 ggtgaggggtgcctttctgatttggtcctaaagtttggtggaccgatcacttttgattcgagatcggcagtcaattctttggatca-gnnnnnnnnnnnn 427  Q
    ||||| ||||||| |||||||| ||||||||||| |||||| ||||||||||||||||||||||||| ||||  ||| |||||||| |                
T  14879415 ggtgacgggtgcccttctgattgggtcctaaagtctggtgggccgatcacttttgattcgagatcgggagtctgttcgttggatcaagttttggttttgg 14879514  T
Q  428 nnnnnnnatggtttctttcggtgaatcagaggtcgagaggtggtggaagttgattgatctttcagataggagcttttcggatgcggctcagctttggtgt 527  Q
           |||||||||||||||| ||  ||||||||||||||||||||| | | ||||||||||||||||||||||||||||| ||||| | ||||||||    
T  14879515 actttttatggtttctttcggtggataggaggtcgagaggtggtggaagcttaatgatctttcagataggagcttttcggatgtggctcgggtttggtgt 14879614  T
Q  528 t 528  Q
    |    
T  14879615 t 14879615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 75 - 313
Target Start/End: Original strand, 37123094 - 37123321
Alignment:
Q  75 gcctctggtattcggatccttgttcgtagtcagtaactcttgtt-gtggtttttagggttgttaaggtgtttagggtgtttgaaggaagtgggtctcgtt 173  Q
    |||||||||| |||| ||||||||||| |||| || |||||||| ||| ||||| |||||||||||| |||||||||||||| |||||| ||||  | ||    
T  37123094 gcctctggtactcgggtccttgttcgtcgtcactagctcttgtttgtgttttttggggttgttaaggagtttagggtgtttggaggaagcgggttccatt 37123193  T
Q  174 gtgttgagctttttccttttgatcagtttgttgtttgcacgaccgcatatatatcacgtcgttgtcatactttttgtgtgttggttgtcggtgggccggt 273  Q
    | ||||||  |||||||||||||| | | |||||||||||   |||    | |||| |   ||||||||||||||||||| ||||| |        || |    
T  37123194 gagttgagtcttttccttttgatctgctggttgtttgcaccttcgc----acatcatgcatttgtcatactttttgtgtgctggtttt--------cgat 37123281  T
Q  274 tacttttgcttcaagatcgggagtcggtgtctagctgcaa 313  Q
    |||||||||||| |||||||||||||||||||||||||||    
T  37123282 tacttttgcttcgagatcgggagtcggtgtctagctgcaa 37123321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 330 - 410
Target Start/End: Original strand, 14193921 - 14194001
Alignment:
Q  330 gtgaggggtgcctttctgatttggtcctaaagtttggtggaccgatcacttttgattcgagatcggcagtcaattctttgg 410  Q
    |||||||||||| |||||||||||||||||||| ||| ||||||||||||||||||||||||| || ||||  ||||||||    
T  14193921 gtgaggggtgcccttctgatttggtcctaaagtctggcggaccgatcacttttgattcgagattgggagtcggttctttgg 14194001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 332 - 414
Target Start/End: Original strand, 37123365 - 37123447
Alignment:
Q  332 gaggggtgcctttctgatttggtcctaaagtttggtggaccgatcacttttgattcgagatcggcagtcaattctttggatca 414  Q
    |||||||||| || || |||||||||||| |||||||| |||||||||||||||||||||| || ||||| ||||||||||||    
T  37123365 gaggggtgcccttatgttttggtcctaaattttggtgggccgatcacttttgattcgagattgggagtcagttctttggatca 37123447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 86 - 309
Target Start/End: Original strand, 14193652 - 14193874
Alignment:
Q  86 tcggatccttgttcgtagtcagtaactcttgtt-gtggtttttagggttgttaaggtgtttagggtgtttgaaggaagtgggtctcgttgtgttgagctt 184  Q
    |||| ||||| ||||| |||| || |||||||| | | ||||| |||||||||||||||||||||| |||| |||||| | ||| ||||| |||| || |    
T  14193652 tcgggtccttattcgtcgtcactagctcttgttcgcgatttttggggttgttaaggtgtttagggtttttggaggaagcgagtcccgttgagttgtgcct 14193751  T
Q  185 tttccttttgatcagtttgttgtttgcacgaccgcatatatatcacgtcg-ttgtcatac-tttttgtgtgttggttgtcggtgggccggttacttttgc 282  Q
    ||||||||||||  |||| |||||| ||| ||||    ||||||| |||| ||||||| | |||||||||| | |||   | || ||||  |||||||||    
T  14193752 tttccttttgattcgtttcttgtttacaccaccg----tatatcaagtcgtttgtcattcttttttgtgtgctagtttctgatgcgccgactacttttgc 14193847  T
Q  283 ttcaagatcgggagtcggtgtctagct 309  Q
    ||| | |||||||||||||||||||||    
T  14193848 ttcgatatcgggagtcggtgtctagct 14193874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 332 - 395
Target Start/End: Complemental strand, 23328448 - 23328385
Alignment:
Q  332 gaggggtgcctttctgatttggtcctaaagtttggtggaccgatcacttttgattcgagatcgg 395  Q
    |||||||||| |  ||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  23328448 gaggggtgccctgttgatttggttctaaagtttggtggaccgatcacttttgattcgagatcgg 23328385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 435 - 526
Target Start/End: Original strand, 25647772 - 25647863
Alignment:
Q  435 atggtttctttcggtgaatcagaggtcgagaggtggtggaagttgattgatctttcagataggagcttttcggatgcggctcagctttggtg 526  Q
    ||||||||||| |||| ||| ||||||||||||||||| ||||||| ||||||||| | || |||||||||||| | ||||||| |||||||    
T  25647772 atggtttcttttggtggatcggaggtcgagaggtggtgaaagttgaatgatctttcggttatgagcttttcggacgtggctcagttttggtg 25647863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 435 - 528
Target Start/End: Complemental strand, 33143943 - 33143850
Alignment:
Q  435 atggtttctttcggtgaatcagaggtcgagaggtggtggaagttgattgatctttcagataggagcttttcggatgcggctcagctttggtgtt 528  Q
    |||||||||||||||| ||||||||||| ||||||||||||| |||||||||| | | ||||||| ||||  | || || ||||||||||||||    
T  33143943 atggtttctttcggtggatcagaggtcgcgaggtggtggaagctgattgatctcttatataggagttttttcgttgtggatcagctttggtgtt 33143850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 335 - 410
Target Start/End: Complemental strand, 40023667 - 40023592
Alignment:
Q  335 gggtgcctttctgatttggtcctaaagtttggtggaccgatcacttttgattcgagatcggcagtcaattctttgg 410  Q
    ||||||| | ||||||| ||  |||||| |||||||||||||||||||||||||||||||| |||| |||||||||    
T  40023667 gggtgccctgctgattttgttttaaagtctggtggaccgatcacttttgattcgagatcgggagtcgattctttgg 40023592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 438 - 528
Target Start/End: Complemental strand, 14755256 - 14755166
Alignment:
Q  438 gtttctttcggtgaatcagaggtcgagaggtggtggaagttgattgatctttcagataggagcttttcggatgcggctcagctttggtgtt 528  Q
    |||||||||| || ||| ||||||||||| ||||||||||||| ||||||||| |  | |||||| | ||||| |||||||||||||||||    
T  14755256 gtttctttcgatggatcggaggtcgagagatggtggaagttgaatgatctttcggggatgagcttgttggatgtggctcagctttggtgtt 14755166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 243 - 313
Target Start/End: Complemental strand, 14755475 - 14755405
Alignment:
Q  243 ctttttgtgtgttggttgtcggtgggccggttacttttgcttcaagatcgggagtcggtgtctagctgcaa 313  Q
    ||||||||||| || ||  || ||||||||||||||||||||| ||||||||||||||| |||||||||||    
T  14755475 ctttttgtgtgctgatttccgatgggccggttacttttgcttcgagatcgggagtcggtatctagctgcaa 14755405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 335 - 409
Target Start/End: Original strand, 19176488 - 19176562
Alignment:
Q  335 gggtgcctttctgatttggtcctaaagtttggtggaccgatcacttttgattcgagatcggcagtcaattctttg 409  Q
    ||||||| | || ||||||| ||||||| |||||| ||||||||||||||||||||||||| ||||| |||||||    
T  19176488 gggtgccctgctaatttggttctaaagtctggtgggccgatcacttttgattcgagatcgggagtcagttctttg 19176562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 348 - 409
Target Start/End: Original strand, 43012374 - 43012435
Alignment:
Q  348 atttggtcctaaagtttggtggaccgatcacttttgattcgagatcggcagtcaattctttg 409  Q
    ||||||| ||||||| |||||| ||||||||||||||||||||||||| ||||| |||||||    
T  43012374 atttggttctaaagtctggtggcccgatcacttttgattcgagatcgggagtcagttctttg 43012435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 359 - 414
Target Start/End: Complemental strand, 33144020 - 33143965
Alignment:
Q  359 aagtttggtggaccgatcacttttgattcgagatcggcagtcaattctttggatca 414  Q
    |||| ||||||| |||||||||||||||||||||||| ||||| ||||||||||||    
T  33144020 aagtctggtggatcgatcacttttgattcgagatcgggagtcagttctttggatca 33143965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 335 - 409
Target Start/End: Complemental strand, 9584148 - 9584074
Alignment:
Q  335 gggtgcctttctgatttggtcctaaagtttggtggaccgatcacttttgattcgagatcggcagtcaattctttg 409  Q
    ||||||| | || ||||| | ||||||| ||||||| |||||||||||||||||||||||| ||||| |||||||    
T  9584148 gggtgccctgctaatttgatactaaagtctggtggatcgatcacttttgattcgagatcgggagtcagttctttg 9584074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 435 - 517
Target Start/End: Complemental strand, 28937709 - 28937627
Alignment:
Q  435 atggtttctttcggtgaatcagaggtcgagaggtggtggaagttgattgatctttcagataggagcttttcggatgcggctca 517  Q
    |||||||||||||||| ||| |||||| |||| ||||||||| ||| |||| ||||||  |||||||||| ||||| ||||||    
T  28937709 atggtttctttcggtggatcggaggtcaagagatggtggaagctgaatgatgtttcagggaggagctttttggatgtggctca 28937627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 440 - 529
Target Start/End: Complemental strand, 39021267 - 39021177
Alignment:
Q  440 ttctttcggtgaatcagaggtcgagaggtggtggaagttgattgatc-tttcagataggagcttttcggatgcggctcagctttggtgttg 529  Q
    |||||| |||| ||| ||||||||||| |||||| || ||||||||| |||| |||| ||| |||||||||| |||| |||||||||||||    
T  39021267 ttcttttggtggatcggaggtcgagagatggtggtagctgattgatcttttcggatatgagtttttcggatgtggcttagctttggtgttg 39021177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 332 - 394
Target Start/End: Original strand, 45398779 - 45398841
Alignment:
Q  332 gaggggtgcctttctgatttggtcctaaagtttggtggaccgatcacttttgattcgagatcg 394  Q
    |||||||||| | |||||||||   |||||| |||||||||||||||||||||||||||||||    
T  45398779 gaggggtgccctgctgatttggatttaaagtctggtggaccgatcacttttgattcgagatcg 45398841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 328 - 410
Target Start/End: Original strand, 47945685 - 47945767
Alignment:
Q  328 gggtgaggggtgcctttctgatttggtcctaaagtttggtggaccgatcacttttgattcgagatcggcagtcaattctttgg 410  Q
    |||| |||||||||  |||| || |||||||||||  ||||| ||||||||||||||||||||||||| ||||| || |||||    
T  47945685 gggtaaggggtgcccgtctggttgggtcctaaagtccggtgggccgatcacttttgattcgagatcgggagtcagttatttgg 47945767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 332 - 409
Target Start/End: Complemental strand, 2392604 - 2392527
Alignment:
Q  332 gaggggtgcctttctgatttggtcctaaagtttggtggaccgatcacttttgattcgagatcggcagtcaattctttg 409  Q
    |||||||||| | || ||||||| ||| ||  ||||||||||||||||||||||||||||| || ||||| |||||||    
T  2392604 gaggggtgccctgctaatttggtactatagcctggtggaccgatcacttttgattcgagattggaagtcagttctttg 2392527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 332 - 409
Target Start/End: Complemental strand, 2394351 - 2394274
Alignment:
Q  332 gaggggtgcctttctgatttggtcctaaagtttggtggaccgatcacttttgattcgagatcggcagtcaattctttg 409  Q
    |||||||||| | || ||||||| ||| ||  ||||||||||||||||||||||||||||| || ||||| |||||||    
T  2394351 gaggggtgccctgctaatttggtactatagcctggtggaccgatcacttttgattcgagattggaagtcagttctttg 2394274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 330 - 395
Target Start/End: Original strand, 25647665 - 25647730
Alignment:
Q  330 gtgaggggtgcctttctgatttggtcctaaagtttggtggaccgatcacttttgattcgagatcgg 395  Q
    |||| ||||||| |||||||||||||||||||| ||  || || ||||||||||||||||||||||    
T  25647665 gtgaagggtgcccttctgatttggtcctaaagtctgacgggcctatcacttttgattcgagatcgg 25647730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 241 - 313
Target Start/End: Original strand, 19176369 - 19176441
Alignment:
Q  241 tactttttgtgtgttggttgtcggtgggccggttacttttgcttcaagatcgggagtcggtgtctagctgcaa 313  Q
    ||||| ||||||| ||||| ||||||||| |||| |||| ||||| ||||| |||||||| ||||||||||||    
T  19176369 tacttattgtgtgctggttttcggtgggctggttcctttggcttcgagatcaggagtcggggtctagctgcaa 19176441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 441 - 529
Target Start/End: Complemental strand, 23328337 - 23328249
Alignment:
Q  441 tctttcggtgaatcagaggtcgagaggtggtggaagttgattgatctttcagataggagcttttcggatgcggctcagctttggtgttg 529  Q
    |||||||||| ||| ||||||||||||| ||||||| |  ||| || ||| | ||||||||||||| ||| |||||||||| |||||||    
T  23328337 tctttcggtggatcggaggtcgagaggttgtggaagctccttgttcattcggttaggagcttttcgaatgtggctcagcttgggtgttg 23328249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 332 - 407
Target Start/End: Complemental strand, 34475852 - 34475777
Alignment:
Q  332 gaggggtgcctttctgatttggtcctaaagtttggtggaccgatcacttttgattcgagatcggcagtcaattctt 407  Q
    |||||||||| | || ||||| | ||| ||| |||||| ||||||||||||||||||||||||| |||||| ||||    
T  34475852 gaggggtgccctgctaatttgtttctatagtctggtgggccgatcacttttgattcgagatcgggagtcaaatctt 34475777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 247 - 313
Target Start/End: Complemental strand, 2392715 - 2392649
Alignment:
Q  247 ttgtgtgttggttgtcggtgggccggttacttttgcttcaagatcgggagtcggtgtctagctgcaa 313  Q
    ||||||| ||||| ||| |||| |||||  ||| |||||||||||||||||||| ||||||||||||    
T  2392715 ttgtgtgctggttttcgatgggacggttcatttggcttcaagatcgggagtcggggtctagctgcaa 2392649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 247 - 313
Target Start/End: Complemental strand, 2394462 - 2394396
Alignment:
Q  247 ttgtgtgttggttgtcggtgggccggttacttttgcttcaagatcgggagtcggtgtctagctgcaa 313  Q
    ||||||| ||||| ||| |||| |||||  ||| |||||||||||||||||||| ||||||||||||    
T  2394462 ttgtgtgctggttttcgatgggacggttcatttggcttcaagatcgggagtcggggtctagctgcaa 2394396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 356 - 410
Target Start/End: Complemental strand, 14755339 - 14755285
Alignment:
Q  356 ctaaagtttggtggaccgatcacttttgattcgagatcggcagtcaattctttgg 410  Q
    ||||||| |||||| ||||||||||||||||| ||||||| ||||| ||||||||    
T  14755339 ctaaagtctggtgggccgatcacttttgattcaagatcgggagtcagttctttgg 14755285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 364 - 414
Target Start/End: Complemental strand, 39021342 - 39021292
Alignment:
Q  364 tggtggaccgatcacttttgattcgagatcggcagtcaattctttggatca 414  Q
    |||||| |||||||||||||||||||| |||| ||||| ||||||||||||    
T  39021342 tggtgggccgatcacttttgattcgaggtcgggagtcagttctttggatca 39021292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 364 - 409
Target Start/End: Original strand, 17550972 - 17551017
Alignment:
Q  364 tggtggaccgatcacttttgattcgagatcggcagtcaattctttg 409  Q
    |||||| ||||||||||||||||||||||||| ||||| |||||||    
T  17550972 tggtgggccgatcacttttgattcgagatcgggagtcagttctttg 17551017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 332 - 409
Target Start/End: Original strand, 20611766 - 20611843
Alignment:
Q  332 gaggggtgcctttctgatttggtcctaaagtttggtggaccgatcacttttgattcgagatcggcagtcaattctttg 409  Q
    |||||||||| | || |||| || ||| |||||| ||| ||||||| ||||||||||||||||| ||||| |||||||    
T  20611766 gaggggtgccctgctaatttcgtactatagtttgttgggccgatcatttttgattcgagatcgggagtcagttctttg 20611843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 334 - 410
Target Start/End: Original strand, 5556555 - 5556631
Alignment:
Q  334 ggggtgcctttctgatttggtcctaaagtttggtggaccgatcacttttgattcgagatcggcagtcaattctttgg 410  Q
    |||||||| || |||||||||| |  ||| ||||||  ||||| |||||||||||||||||| ||||| ||||||||    
T  5556555 ggggtgcccttttgatttggtcttgtagtctggtggggcgatcgcttttgattcgagatcgggagtcagttctttgg 5556631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 117 - 209
Target Start/End: Original strand, 47235462 - 47235554
Alignment:
Q  117 ttgtggtttttagggttgttaaggtgtttagggtgtttgaaggaagtgggtctcgttgtgttgagctttttccttttgatcagtttgttgttt 209  Q
    ||||| ||||| |||| ||| ||||||||| || ||||| |||  | | ||| ||||||||||||| |||||||||||||  |||||||||||    
T  47235462 ttgtgtttttttgggtggtttaggtgtttacggagtttggagggtgcgtgtcacgttgtgttgagccttttccttttgatttgtttgttgttt 47235554  T

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Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 591 - 675
Target Start/End: Complemental strand, 48893156 - 48893073
Alignment:
Q  591 aggagtatgttttaggtggtaacgtatattttggtgggtgttatcatcatgggtgttttttatagtatttattttcgggtgttcc 675  Q
    |||||| | ||||||||||| || | |||||||||||||||| || ||| ||||| |||||| ||| ||||||||||| ||||||    
T  48893156 aggagtctcttttaggtggtgacatgtattttggtgggtgttgtcttcaggggtg-tttttaaagtgtttattttcggatgttcc 48893073  T

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Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 343 - 410
Target Start/End: Complemental strand, 1652973 - 1652906
Alignment:
Q  343 ttctgatttggtcctaaagtttggtggaccgatcacttttgattcgagatcggcagtcaattctttgg 410  Q
    ||||||||||||||| || | | |||| ||||||||||||||||||||||| | ||| | ||||||||    
T  1652973 ttctgatttggtcctgaactcttgtgggccgatcacttttgattcgagatcaggagttagttctttgg 1652906  T

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Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 328 - 395
Target Start/End: Complemental strand, 30935492 - 30935425
Alignment:
Q  328 gggtgaggggtgcctttctgatttggtcctaaagtttggtggaccgatcacttttgattcgagatcgg 395  Q
    |||| ||||||||| ||||||||||||  | ||||||||||| | |||| |||||||||| |||||||    
T  30935492 gggtaaggggtgcccttctgatttggttttgaagtttggtgggctgatcgcttttgattcaagatcgg 30935425  T

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Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 262 - 313
Target Start/End: Complemental strand, 40023764 - 40023713
Alignment:
Q  262 cggtgggccggttacttttgcttcaagatcgggagtcggtgtctagctgcaa 313  Q
    |||||| ||||||| ||||||||| ||||||| ||| |||||||||||||||    
T  40023764 cggtggaccggttatttttgcttcgagatcggaagttggtgtctagctgcaa 40023713  T

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Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 441 - 531
Target Start/End: Original strand, 43012469 - 43012560
Alignment:
Q  441 tctttcggtgaatcagaggtcgagaggtggtggaagttgattgatctttcagataggagcttttcg-gatgcggctcagctttggtgttggg 531  Q
    |||||||||||||||||||||| ||||| ||||||||||  ||||| ||| |  ||| ||| ||||  ||| |||||||||| |||||||||    
T  43012469 tctttcggtgaatcagaggtcgcgaggttgtggaagttgcatgatcgttcggtcaggtgctcttcgaaatgtggctcagcttgggtgttggg 43012560  T

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Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 263 - 313
Target Start/End: Complemental strand, 823627 - 823577
Alignment:
Q  263 ggtgggccggttacttttgcttcaagatcgggagtcggtgtctagctgcaa 313  Q
    ||||| ||||||| ||||||||||||||| ||||| ||||||||| |||||    
T  823627 ggtggaccggttaattttgcttcaagatcaggagttggtgtctagttgcaa 823577  T

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Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 263 - 309
Target Start/End: Original strand, 5556459 - 5556505
Alignment:
Q  263 ggtgggccggttacttttgcttcaagatcgggagtcggtgtctagct 309  Q
    ||||||||||||||||||| ||| ||||||| ||| |||||||||||    
T  5556459 ggtgggccggttacttttgattcgagatcggaagttggtgtctagct 5556505  T

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Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 592 - 650
Target Start/End: Original strand, 14194209 - 14194267
Alignment:
Q  592 ggagtatgttttaggtggtaacgtatattttggtgggtgttatcatcatgggtgttttt 650  Q
    ||||| ||||||||||||| |||| |||||||||||||||  || ||||| ||||||||    
T  14194209 ggagtctgttttaggtggtgacgtgtattttggtgggtgtggtcctcatgagtgttttt 14194267  T

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Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 585 - 675
Target Start/End: Complemental strand, 50518898 - 50518809
Alignment:
Q  585 tcgtgtaggagtatgttttaggtggtaacgtatattttggtgggtgttatcatcatgggtgttttttatagtatttattttcgggtgttcc 675  Q
    ||||| |||||| |||||||| |||| | || ||||||| |||||||  || |||||||||| |||||  || ||||||||||||||||||    
T  50518898 tcgtgaaggagtctgttttagatggtgaggtgtattttgttgggtgtggtcctcatgggtgt-ttttagggtgtttattttcgggtgttcc 50518809  T

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Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 265 - 313
Target Start/End: Complemental strand, 23328537 - 23328491
Alignment:
Q  265 tgggccggttacttttgcttcaagatcgggagtcggtgtctagctgcaa 313  Q
    ||||||||||  ||||||||| ||||||||||| |||||||||||||||    
T  23328537 tgggccggtt--ttttgcttcgagatcgggagttggtgtctagctgcaa 23328491  T

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Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 435 - 528
Target Start/End: Original strand, 37123468 - 37123559
Alignment:
Q  435 atggtttctttcggtgaatcagaggtcgagaggtggtggaagttgattgatctttcagataggagcttttcggatgcggctcagctttggtgtt 528  Q
    |||||||||||||  || || ||| |||| |||||||||||| ||  |||||||||||| | ||||||||| |||| |||||||||||| ||||    
T  37123468 atggtttctttcgagga-tcggagttcgataggtggtggaagctgtatgatctttcagacatgagcttttc-gatgtggctcagctttgatgtt 37123559  T

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Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 248 - 313
Target Start/End: Original strand, 47235589 - 47235654
Alignment:
Q  248 tgtgtgttggttgtcggtgggccggttacttttgcttcaagatcgggagtcggtgtctagctgcaa 313  Q
    |||||| ||||| ||| ||||||||||  ||| ||||| |||||||||||| | ||||||||||||    
T  47235589 tgtgtgctggttttcgatgggccggttcatttggcttcgagatcgggagtcagggtctagctgcaa 47235654  T

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Target: chr4 (Bit Score: 93; Significance: 7e-45; HSPs: 48)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 93; E-Value: 7e-45
Query Start/End: Original strand, 327 - 675
Target Start/End: Complemental strand, 39421116 - 39420756
Alignment:
Q  327 agggtgaggggtgcctttctgatttggtcctaaagtttggtggaccgatcacttttgattcgagatcggcagtcaattctttggatcagnnnnnnnnnnn 426  Q
    ||||||||||||||| ||||||| ||||| || ||  |||||| ||||||||||||||||||||||||| ||||||||| || ||||||               
T  39421116 agggtgaggggtgcccttctgatatggtcttatagcctggtgggccgatcacttttgattcgagatcgggagtcaattccttagatcagttttggttttg 39421017  T
Q  427 nnnnnnnnatggtttctttcggtgaatcagaggtcgagaggtggtggaagttgattgatctttcagataggagcttttcggatgcggctcagctttggtg 526  Q
            ||||||| |||||||| ||| ||| ||||||||||||||||  |||||||| |||||||||||||||||||  ||| |||| ||||| ||||    
T  39421016 ggctttttatggtttttttcggtggatcggagatcgagaggtggtggaaactgattgatatttcagataggagcttttcaaatgtggcttagcttcggtg 39420917  T
Q  527 ttgggtgtttttctttgggggtgagtaatgacgacgagtgaggttgggtat-------------gttgttctcgtgtaggagtatgttttaggtggtaac 613  Q
    |||||| |||||||||||| ||||||| |||||||| |||  ||||| |||             |||||||||||||||||||  ||||||| |||| ||    
T  39420916 ttgggtctttttctttgggtgtgagtagtgacgacgggtggtgttggatatcgtttatacggtggttgttctcgtgtaggagtcagttttagatggtgac 39420817  T
Q  614 gtatattttggtgggtgttatcatcatgggtgttttttatagtatttattttcgggtgttcc 675  Q
    || ||||||||| ||||||||  ||||| ||||||||||| || || |||||||||||||||    
T  39420816 gtgtattttggt-ggtgttatgctcatgagtgttttttatggtgttcattttcgggtgttcc 39420756  T

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Target: chr4; HSP #2
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 329 - 529
Target Start/End: Complemental strand, 53823522 - 53823321
Alignment:
Q  329 ggtgaggggtgcctttctgatttggtcctaaagtttggtggaccgatcacttttgattcgagatcggcagtcaattctttggatcagnnnnnnnnnnnnn 428  Q
    ||||||||||||| ||||||||||||| |||||| ||||||||| |||||||||||||||||||||| ||||| |||||||| |||                  
T  53823522 ggtgaggggtgcccttctgatttggtcataaagtctggtggaccaatcacttttgattcgagatcgggagtcagttctttggctcaagtttggttttggg 53823423  T
Q  429 nnnnnnatggtttctttcggtgaatcagaggtcgagaggtggtggaagttgattgatc-tttcagataggagcttttcggatgcggctcagctttggtgt 527  Q
          |||||||||||||||  |||  |||||||||||||||||||||||||||||| |||  ||||||||||||| ||||| ||||||||||||||||    
T  53823422 ttttttatggtttctttcggttgatcgaaggtcgagaggtggtggaagttgattgatctttttggataggagcttttaggatgtggctcagctttggtgt 53823323  T
Q  528 tg 529  Q
    ||    
T  53823322 tg 53823321  T

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Target: chr4; HSP #3
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 130 - 313
Target Start/End: Complemental strand, 22811482 - 22811301
Alignment:
Q  130 ggttgttaaggtgtttagggtgtttgaaggaagtgggtctcgttgtgttgagctttttccttttgatcagtttgtt-gtttgcacgaccgcatatatatc 228  Q
    |||||||||||||||||||| ||||| |||||| ||||| |||||   | ||| |||||||||||||  |||| || |||||||| ||||||||||| ||    
T  22811482 ggttgttaaggtgtttagggagtttggaggaagcgggtcccgttgatctaagccttttccttttgatatgtttttttgtttgcactaccgcatatatgtc 22811383  T
Q  229 acgtcgttgtcatacttttt-gtgtgttggttgtcggtgggccggttacttttgcttcaagatcgggagtcggtgtctagctgcaa 313  Q
      ||  ||||||| |||||| ||||| ||||| |||||||| |||||||||||||||| ||||||| | | ||||||||| |||||    
T  22811382 --gt--ttgtcattcttttttgtgtgctggttttcggtgggtcggttacttttgcttcgagatcggaacttggtgtctagttgcaa 22811301  T

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Target: chr4; HSP #4
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 438 - 528
Target Start/End: Original strand, 48098422 - 48098512
Alignment:
Q  438 gtttctttcggtgaatcagaggtcgagaggtggtggaagttgattgatctttcagataggagcttttcggatgcggctcagctttggtgtt 528  Q
    |||||||||| || |||  |||||||||||||||||||| |||  |||||||||||||||||||||||||||| |||||| ||||||||||    
T  48098422 gtttctttcgatggatcgaaggtcgagaggtggtggaagatgaacgatctttcagataggagcttttcggatgtggctcaactttggtgtt 48098512  T

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Target: chr4; HSP #5
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 435 - 528
Target Start/End: Complemental strand, 41117962 - 41117869
Alignment:
Q  435 atggtttctttcggtgaatcagaggtcgagaggtggtggaagttgattgatctttcagataggagcttttcggatgcggctcagctttggtgtt 528  Q
    ||||||||||||| || ||||||||||||||||||||||||| ||| |||||||||  ||||||||||| |||| | ||||||| |||||||||    
T  41117962 atggtttctttcgatggatcagaggtcgagaggtggtggaagctgaatgatctttcgaataggagctttgcggaggtggctcaggtttggtgtt 41117869  T

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Target: chr4; HSP #6
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 435 - 528
Target Start/End: Original strand, 49528158 - 49528251
Alignment:
Q  435 atggtttctttcggtgaatcagaggtcgagaggtggtggaagttgattgatctttcagataggagcttttcggatgcggctcagctttggtgtt 528  Q
    |||||||||||||||| ||| ||||||| ||||||||||||| ||| ||||||||| ||||| |||||| |||||| || ||||||||||||||    
T  49528158 atggtttctttcggtggatcggaggtcgggaggtggtggaagatgaatgatctttcggatagaagctttgcggatgtggttcagctttggtgtt 49528251  T

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Target: chr4; HSP #7
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 328 - 410
Target Start/End: Complemental strand, 19815326 - 19815244
Alignment:
Q  328 gggtgaggggtgcctttctgatttggtcctaaagtttggtggaccgatcacttttgattcgagatcggcagtcaattctttgg 410  Q
    |||||||||||||| ||||| |||||||||||||| |||||||||||| |||||| |||||||||| | ||||| ||||||||    
T  19815326 gggtgaggggtgcccttctgttttggtcctaaagtctggtggaccgattactttttattcgagatcaggagtcagttctttgg 19815244  T

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Target: chr4; HSP #8
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 435 - 528
Target Start/End: Complemental strand, 38637228 - 38637135
Alignment:
Q  435 atggtttctttcggtgaatcagaggtcgagaggtggtggaagttgattgatctttcagataggagcttttcggatgcggctcagctttggtgtt 528  Q
    ||||||||||| |||| ||| ||||||||||||||||||||| ||| |||||||||||||| ||||||| | || |||| ||| ||||||||||    
T  38637228 atggtttcttttggtggatcggaggtcgagaggtggtggaagctgaatgatctttcagataagagctttgccgaggcggttcaactttggtgtt 38637135  T

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Target: chr4; HSP #9
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 328 - 410
Target Start/End: Complemental strand, 22811262 - 22811180
Alignment:
Q  328 gggtgaggggtgcctttctgatttggtcctaaagtttggtggaccgatcacttttgattcgagatcggcagtcaattctttgg 410  Q
    |||||||| ||||| ||||||||||||| |||||| |||||| ||||||| |||| |||||||||||| ||||| ||||||||    
T  22811262 gggtgaggagtgcccttctgatttggtcttaaagtctggtgggccgatcattttttattcgagatcgggagtcagttctttgg 22811180  T

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Target: chr4; HSP #10
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 329 - 491
Target Start/End: Complemental strand, 2061839 - 2061677
Alignment:
Q  329 ggtgaggggtgcctttctgatttggtcctaaagtttggtggaccgatcacttttgattcgagatcggcagtcaattctttggatcagnnnnnnnnnnnnn 428  Q
    ||||||||||||| |  ||||||| ||||||||| |||||| | |||||||||||||||||||| |  ||||| |||||||||||||                 
T  2061839 ggtgaggggtgccctcttgatttgatcctaaagtctggtgggctgatcacttttgattcgagattgagagtcagttctttggatcagttttgattttggg 2061740  T
Q  429 nnnnnnatggtttctttcggtgaatcagaggtcgagaggtggtggaagttgattgatctttca 491  Q
          ||| |||||||||||| ||| ||||||||||||||||||||||||| ||||||||||    
T  2061739 cttttgatgatttctttcggtggatcggaggtcgagaggtggtggaagttgaatgatctttca 2061677  T

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Target: chr4; HSP #11
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 329 - 410
Target Start/End: Original strand, 25753152 - 25753233
Alignment:
Q  329 ggtgaggggtgcctttctgatttggtcctaaagtttggtggaccgatcacttttgattcgagatcggcagtcaattctttgg 410  Q
    ||||||| |||||  ||| ||||||||||||||| ||||||  |||||||||||||||||||||||| ||||| ||||||||    
T  25753152 ggtgaggagtgcccgtcttatttggtcctaaagtctggtggggcgatcacttttgattcgagatcgggagtcagttctttgg 25753233  T

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Target: chr4; HSP #12
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 75 - 309
Target Start/End: Complemental strand, 38639788 - 38639554
Alignment:
Q  75 gcctctggtattcggatccttgttcgtagtcagtaactcttgttgtgg---tttttagggttgttaaggtgtttagggtgtttgaaggaagtgggtctcg 171  Q
    ||||||| || |||||||||||||||| |||| ||||||||||| ||    ||||| |||||  ||||||||||| |||||| | || | | | ||| |     
T  38639788 gcctctgttactcggatccttgttcgtcgtcactaactcttgttttgcgttttttttgggtt--taaggtgtttaaggtgttgggagaatgcgagtccct 38639691  T
Q  172 ttgtgttgagctttttccttttgatcagtttgttgtttgcacgaccgcatatatatcacgtcgttgtcatactttttgtgtgttggttgtc-ggtgggcc 270  Q
    |||||  |||| ||||||||||||||  ||||||| |||||| ||||| |||  || | ||  ||||||||||| ||||||| ||||  || ||||||||    
T  38639690 ttgtgccgagccttttccttttgatctttttgttgcttgcaccaccgcttatc-atgatgtt-ttgtcatacttattgtgtgctggtactccggtgggcc 38639593  T
Q  271 ggttacttttgcttcaagatcgggagtcggtgtctagct 309  Q
    ||||| ||||||||| |||||||||| ||||| ||||||    
T  38639592 ggttagttttgcttcgagatcgggagccggtgcctagct 38639554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 332 - 395
Target Start/End: Complemental strand, 31050760 - 31050697
Alignment:
Q  332 gaggggtgcctttctgatttggtcctaaagtttggtggaccgatcacttttgattcgagatcgg 395  Q
    |||||||||| | |||||||||| ||||||| |||||| |||||||||||||||||||||||||    
T  31050760 gaggggtgccctactgatttggttctaaagtctggtgggccgatcacttttgattcgagatcgg 31050697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 250 - 313
Target Start/End: Complemental strand, 31050866 - 31050803
Alignment:
Q  250 tgtgttggttgtcggtgggccggttacttttgcttcaagatcgggagtcggtgtctagctgcaa 313  Q
    ||||||||||  |||||||||||||||||||||||| ||| |||||||||||| ||||||||||    
T  31050866 tgtgttggtttccggtgggccggttacttttgcttcgagaccgggagtcggtgactagctgcaa 31050803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 327 - 410
Target Start/End: Complemental strand, 46698888 - 46698805
Alignment:
Q  327 agggtgaggggtgcctttctgatttggtcctaaagtttggtggaccgatcacttttgattcgagatcggcagtcaattctttgg 410  Q
    |||||| |||||||| |||||||||||||||  ||| |||||| |||||  |||||||||||||||||| ||||| ||||||||    
T  46698888 agggtgtggggtgcccttctgatttggtcctgtagtctggtgggccgattgcttttgattcgagatcgggagtcagttctttgg 46698805  T

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Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 263 - 313
Target Start/End: Complemental strand, 53823613 - 53823563
Alignment:
Q  263 ggtgggccggttacttttgcttcaagatcgggagtcggtgtctagctgcaa 313  Q
    ||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  53823613 ggtgggccggttacttttgcttcgagatcgggagtcggtgtctaactgcaa 53823563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 264 - 313
Target Start/End: Original strand, 19672991 - 19673040
Alignment:
Q  264 gtgggccggttacttttgcttcaagatcgggagtcggtgtctagctgcaa 313  Q
    |||||||||||||||||||||| |||||||||||| ||||||||||||||    
T  19672991 gtgggccggttacttttgcttcgagatcgggagtcagtgtctagctgcaa 19673040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 142 - 313
Target Start/End: Original strand, 25752942 - 25753111
Alignment:
Q  142 gtttagggtgtttgaaggaagtgggtctcgttgt-gttgagctttttccttttgatcagtttgttgtttgcacgaccgcatatatatcacgtcgttgtca 240  Q
    |||||||||||||| | |||| |||||  ||||  ||||| | |||||||||||||   |||||||||||||| ||| ||||| |||  |||  ||| |     
T  25752942 gtttagggtgtttggaagaagcgggtcatgttggagttgaaccttttccttttgatatatttgttgtttgcacaaccacatat-tatgtcgt--ttgcct 25753038  T
Q  241 tactttttgtgtgttggttgtcggtgggccggttacttttgcttcaagatcgggagtcggtgtctagctgcaa 313  Q
    |||||||||| || |||||  || ||||| | ||| ||||||||| |||||||||||||||||||||||||||    
T  25753039 tactttttgtttgctggtttccgatgggcagcttaattttgcttcgagatcgggagtcggtgtctagctgcaa 25753111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 336 - 409
Target Start/End: Original strand, 35800476 - 35800549
Alignment:
Q  336 ggtgcctttctgatttggtcctaaagtttggtggaccgatcacttttgattcgagatcggcagtcaattctttg 409  Q
    |||||| |||||||||||| || |||| ||||| ||||||| |||||||||||||||||| ||||| |||||||    
T  35800476 ggtgcccttctgatttggttctgaagtctggtgaaccgatcgcttttgattcgagatcggaagtcagttctttg 35800549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 343 - 407
Target Start/End: Complemental strand, 21387291 - 21387227
Alignment:
Q  343 ttctgatttggtcctaaagtttggtggaccgatcacttttgattcgagatcggcagtcaattctt 407  Q
    |||||||||||| ||  ||| |||||||||||||||||||||||||||||||| ||||| |||||    
T  21387291 ttctgatttggtgctggagtctggtggaccgatcacttttgattcgagatcggaagtcagttctt 21387227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 262 - 313
Target Start/End: Complemental strand, 19815417 - 19815366
Alignment:
Q  262 cggtgggccggttacttttgcttcaagatcgggagtcggtgtctagctgcaa 313  Q
    ||||||||| |||||||||||||| |||||| ||||||||||||||||||||    
T  19815417 cggtgggccagttacttttgcttcgagatcgagagtcggtgtctagctgcaa 19815366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 328 - 410
Target Start/End: Original strand, 19673080 - 19673161
Alignment:
Q  328 gggtgaggggtgcctttctgatttggtcctaaagtttggtggaccgatcacttttgattcgagatcggcagtcaattctttgg 410  Q
    |||||||||||||| ||||| |||||||||||||| |||||||||  || ||||| |||||||||| | ||||| ||||||||    
T  19673080 gggtgaggggtgcccttctgttttggtcctaaagtctggtggaccattccctttt-attcgagatcaggagtcagttctttgg 19673161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 332 - 409
Target Start/End: Original strand, 8255010 - 8255087
Alignment:
Q  332 gaggggtgcctttctgatttggtcctaaagtttggtggaccgatcacttttgattcgagatcggcagtcaattctttg 409  Q
    |||||||||| | || ||||||| ||||||| |||||| ||||||||||||||| ||||||| | ||||| |||||||    
T  8255010 gaggggtgccctgctaatttggtactaaagtctggtgggccgatcacttttgatccgagatcagaagtcagttctttg 8255087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 332 - 409
Target Start/End: Original strand, 8268428 - 8268505
Alignment:
Q  332 gaggggtgcctttctgatttggtcctaaagtttggtggaccgatcacttttgattcgagatcggcagtcaattctttg 409  Q
    |||||||||| | || ||||||| ||||||| |||||| ||||||||||||||| ||||||| | ||||| |||||||    
T  8268428 gaggggtgccctgctaatttggtactaaagtctggtgggccgatcacttttgatccgagatcagaagtcagttctttg 8268505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 440 - 529
Target Start/End: Complemental strand, 19815210 - 19815121
Alignment:
Q  440 ttctttcggtgaatcagaggtcgagaggtggtggaagttgattgatctttcagataggagcttttcggatgcggctcagctttggtgttg 529  Q
    ||||||||||| | | ||||||||||| ||||||||| | | ||||||||| ||||||| |||||| |||| |||| | |||||||||||    
T  19815210 ttctttcggtggaccggaggtcgagagatggtggaagctaaatgatctttcggataggaacttttccgatgtggctaaactttggtgttg 19815121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 264 - 312
Target Start/End: Complemental strand, 46698976 - 46698928
Alignment:
Q  264 gtgggccggttacttttgcttcaagatcgggagtcggtgtctagctgca 312  Q
    |||||||| ||||||||||||| ||||||||||| ||||||||||||||    
T  46698976 gtgggccgattacttttgcttcgagatcgggagttggtgtctagctgca 46698928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 247 - 310
Target Start/End: Original strand, 8254899 - 8254962
Alignment:
Q  247 ttgtgtgttggttgtcggtgggccggttacttttgcttcaagatcgggagtcggtgtctagctg 310  Q
    ||||||||||||| ||||||||||||||  ||| ||||| |||||||||||||  |||||||||    
T  8254899 ttgtgtgttggttttcggtgggccggttcttttggcttcgagatcgggagtcgaggtctagctg 8254962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 247 - 310
Target Start/End: Original strand, 8268317 - 8268380
Alignment:
Q  247 ttgtgtgttggttgtcggtgggccggttacttttgcttcaagatcgggagtcggtgtctagctg 310  Q
    ||||||||||||| ||||||||||||||  ||| ||||| |||||||||||||  |||||||||    
T  8268317 ttgtgtgttggttttcggtgggccggttcttttggcttcgagatcgggagtcgaggtctagctg 8268380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 347 - 410
Target Start/End: Original strand, 16501729 - 16501792
Alignment:
Q  347 gatttggtcctaaagtttggtggaccgatcacttttgattcgagatcggcagtcaattctttgg 410  Q
    |||||| |||| ||||||||||| |||||| |||||||||||||||||| |||||  |||||||    
T  16501729 gatttgatcctgaagtttggtgggccgatcgcttttgattcgagatcgggagtcagctctttgg 16501792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 371 - 410
Target Start/End: Complemental strand, 38637291 - 38637252
Alignment:
Q  371 ccgatcacttttgattcgagatcggcagtcaattctttgg 410  Q
    ||||||||||||||||||||||||| ||||||||||||||    
T  38637291 ccgatcacttttgattcgagatcgggagtcaattctttgg 38637252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 263 - 312
Target Start/End: Original strand, 12296064 - 12296113
Alignment:
Q  263 ggtgggccggttacttttgcttcaagatcgggagtcggtgtctagctgca 312  Q
    ||||||||| ||||||||||||| ||||||||||| || |||||||||||    
T  12296064 ggtgggccgattacttttgcttcgagatcgggagttggcgtctagctgca 12296113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 435 - 528
Target Start/End: Complemental strand, 16833016 - 16832923
Alignment:
Q  435 atggtttctttcggtgaatcagaggtcgagaggtggtggaagttgattgatctttcagataggagcttttcggatgcggctcagctttggtgtt 528  Q
    |||||||||||| |||  || || ||| ||||||| | |||| ||| ||||||||  |||| |||||||||||||| |||||| ||||||||||    
T  16833016 atggtttctttcagtggttcggaagtcaagaggtgattgaagctgaatgatctttgggatatgagcttttcggatgtggctcaactttggtgtt 16832923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 263 - 312
Target Start/End: Complemental strand, 21988111 - 21988062
Alignment:
Q  263 ggtgggccggttacttttgcttcaagatcgggagtcggtgtctagctgca 312  Q
    ||||||||||||||||||| ||| ||||| ||||| ||||||||||||||    
T  21988111 ggtgggccggttacttttgtttcgagatcaggagttggtgtctagctgca 21988062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 327 - 395
Target Start/End: Original strand, 2825761 - 2825829
Alignment:
Q  327 agggtgaggggtgcctttctgatttggtcctaaagtttggtggaccgatcacttttgattcgagatcgg 395  Q
    |||| |||||||||  | |||||||||| |||||||  ||||| ||||||| |||||||||||||||||    
T  2825761 agggcgaggggtgctctgctgatttggttctaaagtccggtgggccgatcatttttgattcgagatcgg 2825829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 241 - 313
Target Start/End: Original strand, 30964307 - 30964379
Alignment:
Q  241 tactttttgtgtgttggttgtcggtgggccggttacttttgcttcaagatcgggagtcggtgtctagctgcaa 313  Q
    ||||| ||||||| ||||| ||| ||||||||||  ||| ||||| ||||||| |||||| ||||||||||||    
T  30964307 tacttattgtgtgctggttttcgatgggccggttcatttggcttcgagatcggaagtcggggtctagctgcaa 30964379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 346 - 414
Target Start/End: Original strand, 49747524 - 49747592
Alignment:
Q  346 tgatttggtcctaaagtttggtggaccgatcacttttgattcgagatcggcagtcaattctttggatca 414  Q
    ||||||||| ||||||| |||||  |||||||||||||||| |||||||  ||||| |||||| |||||    
T  49747524 tgatttggttctaaagtctggtgagccgatcacttttgatttgagatcgagagtcagttcttttgatca 49747592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 328 - 414
Target Start/End: Complemental strand, 19311443 - 19311359
Alignment:
Q  328 gggtgaggggtgcctttctgatttggtcctaaagtttggtggaccgatcacttttgattcgagatcggcagtcaattctttggatca 414  Q
    |||||||||||| | ||||||||||||  ||| || ||||||  |||||||||||||||||||| ||| ||||| || |||||||||    
T  19311443 gggtgaggggtgtccttctgatttggttttaa-gtctggtgggtcgatcacttttgattcgaga-cgggagtcagttatttggatca 19311359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 438 - 528
Target Start/End: Original strand, 25753261 - 25753351
Alignment:
Q  438 gtttctttcggtgaatcagaggtcgagaggtggtggaagttgattgatctttcagataggagcttttcggatgcggctcagctttggtgtt 528  Q
    ||||||||||||| ||| |||||||| |||  ||||||| ||| ||||||||| || || ||||||| ||||| || ||| ||||| ||||    
T  25753261 gtttctttcggtggatcggaggtcgataggcagtggaagctgaatgatctttcggagagaagctttttggatgtggttcaactttgatgtt 25753351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 360 - 394
Target Start/End: Original strand, 26474847 - 26474881
Alignment:
Q  360 agtttggtggaccgatcacttttgattcgagatcg 394  Q
    |||||||||| ||||||||||||||||||||||||    
T  26474847 agtttggtgggccgatcacttttgattcgagatcg 26474881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 328 - 410
Target Start/End: Original strand, 38929806 - 38929888
Alignment:
Q  328 gggtgaggggtgcctttctgatttggtcctaaagtttggtggaccgatcacttttgattcgagatcggcagtcaattctttgg 410  Q
    |||| |||||||||  |||| || |||||| |||| || ||| |||||||||||||||||||||||   ||||| ||||||||    
T  38929806 gggtaaggggtgcccgtctggttgggtcctgaagtctgctgggccgatcacttttgattcgagatcaagagtcagttctttgg 38929888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 327 - 401
Target Start/End: Original strand, 48098311 - 48098385
Alignment:
Q  327 agggtgaggggtgcctttctgatttggtcctaaagtttggtggaccgatcacttttgattcgagatcggcagtca 401  Q
    |||||||| |||||| ||||||||||||| |||||   | ||| || |||||||||| ||||||||||| |||||    
T  48098311 agggtgagaggtgcccttctgatttggtcataaagcccgatgggcctatcacttttgtttcgagatcgggagtca 48098385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 593 - 675
Target Start/End: Original strand, 49747807 - 49747889
Alignment:
Q  593 gagtatgttttaggtggtaacgtatattttggtgggtgttatcatcatgggtgttttttatagtatttattttcgggtgttcc 675  Q
    |||| ||||||||||||| || |  ||||||||||||||| || |||  |||||||||||| || |||||||| || ||||||    
T  49747807 gagtctgttttaggtggtgacatgaattttggtgggtgttgtcctcagaggtgttttttatggtgtttatttttggatgttcc 49747889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 348 - 409
Target Start/End: Original strand, 4305724 - 4305785
Alignment:
Q  348 atttggtcctaaagtttggtggaccgatcacttttgattcgagatcggcagtcaattctttg 409  Q
    ||||||| ||| ||| ||||||  |||||||||||||||||||||||| ||| | |||||||    
T  4305724 atttggtactatagtctggtggggcgatcacttttgattcgagatcgggagttagttctttg 4305785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 263 - 312
Target Start/End: Original strand, 28966763 - 28966812
Alignment:
Q  263 ggtgggccggttacttttgcttcaagatcgggagtcggtgtctagctgca 312  Q
    ||||||||||||||||| ||||| ||||||| ||| || |||||||||||    
T  28966763 ggtgggccggttactttggcttcgagatcggaagttggcgtctagctgca 28966812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 578 - 675
Target Start/End: Complemental strand, 38637050 - 38636953
Alignment:
Q  578 gttgttctcgtgtaggagtatgttttaggtggtaacgtatattttggtgggtgttatcatcatgggtgttttttatagtatttattttcgggtgttcc 675  Q
    |||||| ||||| |||||| ||||||||||||| || | |||||| ||||||||| || ||  |||| || ||||  || ||||||||| ||||||||    
T  38637050 gttgttttcgtgaaggagtttgttttaggtggtgacatgtattttcgtgggtgttgtcctcgggggttttatttaaggtgtttattttcaggtgttcc 38636953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 440 - 489
Target Start/End: Original strand, 38929918 - 38929967
Alignment:
Q  440 ttctttcggtgaatcagaggtcgagaggtggtggaagttgattgatcttt 489  Q
    ||||||||||||  | ||||| | ||||||||||||||||||||||||||    
T  38929918 ttctttcggtgatccggaggttgtgaggtggtggaagttgattgatcttt 38929967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 364 - 409
Target Start/End: Complemental strand, 40813847 - 40813802
Alignment:
Q  364 tggtggaccgatcacttttgattcgagatcggcagtcaattctttg 409  Q
    |||||| ||||||||||||||||||||||||| || ||||| ||||    
T  40813847 tggtgggccgatcacttttgattcgagatcgggagccaattttttg 40813802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 578 - 675
Target Start/End: Complemental strand, 41117784 - 41117688
Alignment:
Q  578 gttgttctcgtgtaggagtatgttttaggtggtaacgtatattttggtgggtgttatcatcatgggtgttttttatagtatttattttcgggtgttcc 675  Q
    |||||| ||||| | |||| |||| |||||||| |  | |||||||||||||||| || |||| |||||| ||||  || ||||||||||||||||||    
T  41117784 gttgttttcgtgcatgagtctgttctaggtggtgatatgtattttggtgggtgttgtcctcat-ggtgttatttagggtgtttattttcgggtgttcc 41117688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 88; Significance: 6e-42; HSPs: 53)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 86 - 313
Target Start/End: Original strand, 8744868 - 8745092
Alignment:
Q  86 tcggatccttgttcgtagtcagtaactcttgttgtggtttttagggttgttaaggtgtttagggtgtttgaaggaagtgggtctcgttgtgttgagcttt 185  Q
    |||| ||||||||||| |||| || | ||||||   ||||||  ||||||||||||||||| | |||||| |||||| | |||| |||| ||||||| ||    
T  8744868 tcggttccttgttcgtcgtcactagcccttgtttgcgttttttcggttgttaaggtgtttacgatgtttggaggaagcgagtcttgttgagttgagcctt 8744967  T
Q  186 ttccttttgatcagtttgttgtttgcacgaccgcatatatatcacgtcgtt-gtcatactttttgtgtgttggttgtcggtgggccggttacttttgctt 284  Q
     |||||||||||  |||||||||||||| |||||||||    || |||||| ||||| ||||||||||| ||||| ||||||||||||||||||||||||    
T  8744968 ctccttttgatctatttgttgtttgcaccaccgcatat----catgtcgtttgtcatgctttttgtgtgctggttttcggtgggccggttacttttgctt 8745063  T
Q  285 caagatcgggagtcggtgtctagctgcaa 313  Q
    | ||||||| || ||||||||||||||||    
T  8745064 cgagatcggaaggcggtgtctagctgcaa 8745092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 327 - 528
Target Start/End: Original strand, 8745131 - 8745332
Alignment:
Q  327 agggtgaggggtgcctttctgatttggtcctaaagtttggtggaccgatcacttttgattcgagatcggcagtcaattctttggatcagnnnnnnnnnnn 426  Q
    ||||||||||||| | |||||||||||||||||| | |||||| ||||||||||||||||||||||||| | ||| ||| ||||||||                
T  8745131 agggtgaggggtggccttctgatttggtcctaaattctggtgggccgatcacttttgattcgagatcgggattcagttcgttggatcaagtttggttttg 8745230  T
Q  427 nnnnnnnnatggtttctttcggtgaatcagaggtcgagaggtggtggaagttgattgatctttcagataggagcttttcggatgcggctcagctttggtg 526  Q
            |||||||||||||||| ||| ||||||||||||| ||||||| ||  ||||||||||||||||||||||||||||| |||||||||||||||    
T  8745231 ggctttttatggtttctttcggtggatcggaggtcgagaggttgtggaagctgcatgatctttcagataggagcttttcggatgtggctcagctttggtg 8745330  T
Q  527 tt 528  Q
    ||    
T  8745331 tt 8745332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 333 - 528
Target Start/End: Complemental strand, 24324895 - 24324699
Alignment:
Q  333 aggggtgcctttctgatttggtcctaaagtttggtggaccgatcacttttgattcgagatcggcagtcaattctttggatc-agnnnnnnnnnnnnnnnn 431  Q
    ||||||||| ||||||||||||| ||||||||||||| ||||||| ||||||||||||||||| |||||||||||||| || ||                    
T  24324895 aggggtgcccttctgatttggtcttaaagtttggtgggccgatcaattttgattcgagatcgggagtcaattctttggctcaagttttggttttgggctt 24324796  T
Q  432 nnnatggtttctttcggtgaatcagaggtcgagaggtggtggaagttgattgatctttcagataggagcttttcggatgcggctcagctttggtgtt 528  Q
       ||||||||||| |||| ||| ||||||||| ||||||||||| ||| ||||||||| | |||||||||||||| || |||||||||||||||||    
T  24324795 tttatggtttctttaggtggatcggaggtcgaggggtggtggaagctgaatgatctttcggttaggagcttttcggctgtggctcagctttggtgtt 24324699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 132 - 313
Target Start/End: Original strand, 16954414 - 16954592
Alignment:
Q  132 ttgttaaggtgtttagggtgtttgaaggaagtgggtctcgttgtgttgagctttttccttttgatcagtttgttgtttgcacgaccgcatatatatcacg 231  Q
    ||||||||||||||||||| |||| ||| || ||||||||||| ||||||| ||||||||| |||  ||||||||||||||| || |||||| | |  ||    
T  16954414 ttgttaaggtgtttagggtttttggaggtagcgggtctcgttgagttgagccttttcctttggatatgtttgttgtttgcaccactgcatatct-tgtcg 16954512  T
Q  232 tcgttgtcatactttttgtgtgttggttgtcggtgggccggttacttttgcttcaagatcgggagtcggtgtctagctgcaa 313  Q
    |  |||||||||||  |||||| |||||  || ||||||| ||||||||||||| |||||| |||| |||||||||||||||    
T  16954513 t--ttgtcatacttactgtgtgctggtttccgatgggccgattacttttgcttccagatcgagagttggtgtctagctgcaa 16954592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 72 - 312
Target Start/End: Complemental strand, 42533633 - 42533395
Alignment:
Q  72 gtagcctctggtattcggatccttgttcgtagtcagtaactcttgtt-gtggtttttagggttgttaaggtgtttagggtgtttgaaggaagtgggtctc 170  Q
    ||||| |||| || |||| ||| ||||||| |||| |  |||||||| ||| ||||| |||||||||||||||||| |||| ||| |||||| | ||| |    
T  42533633 gtagcatctgttactcgggtccatgttcgtcgtcattggctcttgtttgtgattttt-gggttgttaaggtgtttaaggtggttggaggaagcgtgtccc 42533535  T
Q  171 gttgtgttgagctttttccttttgatcagtttg-ttgtttgcacgaccgcatatatatcacgtcgtt-gtcatactttttgtgtgttggttgtcggtggg 268  Q
    |||||  ||||| |||||||||||||  ||||| |||||||||| ||||    ||| ||  |||||| ||||||||||||||||| ||||   || ||||    
T  42533534 gttgttctgagccttttccttttgatttgtttggttgtttgcaccaccg----tatctcttgtcgtttgtcatactttttgtgtgctggtctccgatggg 42533439  T
Q  269 ccggttacttttgcttcaagatcgggagtcggtgtctagctgca 312  Q
    ||||||||||||||||| |||||||||||| ||||| |||||||    
T  42533438 ccggttacttttgcttcgagatcgggagtctgtgtccagctgca 42533395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 328 - 410
Target Start/End: Original strand, 3478331 - 3478413
Alignment:
Q  328 gggtgaggggtgcctttctgatttggtcctaaagtttggtggaccgatcacttttgattcgagatcggcagtcaattctttgg 410  Q
    |||||||||||||| ||||| ||||||||||||||||||||| ||||||||||||||||||||||||| ||| | ||||||||    
T  3478331 gggtgaggggtgcccttctgttttggtcctaaagtttggtgggccgatcacttttgattcgagatcgggagttagttctttgg 3478413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 328 - 410
Target Start/End: Complemental strand, 42533354 - 42533272
Alignment:
Q  328 gggtgaggggtgcctttctgatttggtcctaaagtttggtggaccgatcacttttgattcgagatcggcagtcaattctttgg 410  Q
    |||||||||||||| | |||||||||||||||||| |||||| | ||||||||||||||||||||||| ||||||| ||||||    
T  42533354 gggtgaggggtgccctcctgatttggtcctaaagtctggtgggctgatcacttttgattcgagatcgggagtcaatcctttgg 42533272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 329 - 409
Target Start/End: Original strand, 16954633 - 16954713
Alignment:
Q  329 ggtgaggggtgcctttctgatttggtcctaaagtttggtggaccgatcacttttgattcgagatcggcagtcaattctttg 409  Q
    ||||||||||||| |||||||||||||||||||| |||| ||||||||||||||| ||||||||||  ||||| |||||||    
T  16954633 ggtgaggggtgcccttctgatttggtcctaaagtctggttgaccgatcacttttgtttcgagatcgaaagtcagttctttg 16954713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 123 - 310
Target Start/End: Original strand, 1320548 - 1320730
Alignment:
Q  123 tttttagggttgttaaggtgtttagggtgtttgaaggaagtgggtctcgttgtgttgagctttttccttttgatcagtttgttgtttgcacgaccgcata 222  Q
    |||||||| |||||| |||||||| ||||||||  ||||||||||| ||||| | ||||  ||| |||||  ||| ||||||||||||||| ||||||||    
T  1320548 tttttaggattgtta-ggtgtttatggtgtttggtggaagtgggtcccgttgagctgagtctttccctttgaatctgtttgttgtttgcaccaccgcata 1320646  T
Q  223 tatatcacgtcg-ttgtcatactttttgtgtgttggttgtcggtgggccggttacttttgcttcaagatcgggagtcggtgtctagctg 310  Q
    |    || |||| ||| |||||||||| ||||||||||  |||||| ||| ||  ||||||||| ||||||||||| ||||||||||||    
T  1320647 t----catgtcggttgccatactttttctgtgttggtttccggtggaccgattt-ttttgcttcgagatcgggagttggtgtctagctg 1320730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 330 - 529
Target Start/End: Complemental strand, 6716836 - 6716637
Alignment:
Q  330 gtgaggggtgcctttctgatttggtcctaaagtttggtggaccgatcacttttgattcgagatcggcagtcaattctttggatcagnnnnnnnnnnnnnn 429  Q
    |||||||||||| |||||||||  || |||||| |||| | ||||||||||||||||||||||||| ||||| |||||||| |||                   
T  6716836 gtgaggggtgcccttctgatttaatcataaagtctggttggccgatcacttttgattcgagatcgggagtcagttctttggctcaagtttggtcttgggt 6716737  T
Q  430 nnnnnatggtttctttcggtgaatcagaggtcgagaggtggtggaagttgattgatc-tttcagataggagcttttcggatgcggctcagctttggtgtt 528  Q
         |||||||||||||||| ||| || |||||||||||||||||| ||||||||| |||| |||| ||  ||| |||||| |||||||||||||||||    
T  6716736 tttttatggtttctttcggtggatc-gaagtcgagaggtggtggaagctgattgatcttttcggataagatttttccggatgtggctcagctttggtgtt 6716638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 328 - 410
Target Start/End: Original strand, 1320773 - 1320855
Alignment:
Q  328 gggtgaggggtgcctttctgatttggtcctaaagtttggtggaccgatcacttttgattcgagatcggcagtcaattctttgg 410  Q
    |||||||||||||| || |||||||||| |||||| |||||| ||||||||||||||||| | ||||| ||||| ||||||||    
T  1320773 gggtgaggggtgcccttttgatttggtcataaagtctggtgggccgatcacttttgattcaaaatcggaagtcagttctttgg 1320855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 332 - 410
Target Start/End: Original strand, 6584892 - 6584970
Alignment:
Q  332 gaggggtgcctttctgatttggtcctaaagtttggtggaccgatcacttttgattcgagatcggcagtcaattctttgg 410  Q
    |||||||||| | |||||||||| ||||||| |||||| ||||||||||||||||||||||||| |||||  |||||||    
T  6584892 gaggggtgccctgctgatttggttctaaagtctggtgggccgatcacttttgattcgagatcgggagtcagctctttgg 6584970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 235 - 313
Target Start/End: Complemental strand, 6716956 - 6716878
Alignment:
Q  235 ttgtcatactttttgtgtgttggttgtcggtgggccggttacttttgcttcaagatcgggagtcggtgtctagctgcaa 313  Q
    ||||| ||||||||| ||| ||||| |||||||||| ||||||||| |||  |||||||||||||||||||||||||||    
T  6716956 ttgtcttactttttgcgtgctggttttcggtgggccagttacttttactttgagatcgggagtcggtgtctagctgcaa 6716878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 435 - 525
Target Start/End: Complemental strand, 42533248 - 42533158
Alignment:
Q  435 atggtttctttcggtgaatcagaggtcgagaggtggtggaagttgattgatctttcagataggagcttttcggatgcggctcagctttggt 525  Q
    |||||||||||||||| ||||||||||| |||||||||| |  |||  ||||||||||||| |||||||||||||  || |||||||||||    
T  42533248 atggtttctttcggtggatcagaggtcgtgaggtggtggcaactgaacgatctttcagataagagcttttcggatatggatcagctttggt 42533158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 328 - 409
Target Start/End: Complemental strand, 16829038 - 16828957
Alignment:
Q  328 gggtgaggggtgcctttctgatttggtcctaaagtttggtggaccgatcacttttgattcgagatcggcagtcaattctttg 409  Q
    |||||||||||||| |||||||||||||||||||| |||| | | ||||||||||| ||||||||||  ||||| |||||||    
T  16829038 gggtgaggggtgcccttctgatttggtcctaaagtctggttggctgatcacttttgtttcgagatcgaaagtcagttctttg 16828957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 329 - 386
Target Start/End: Original strand, 44755606 - 44755663
Alignment:
Q  329 ggtgaggggtgcctttctgatttggtcctaaagtttggtggaccgatcacttttgatt 386  Q
    ||||||||||||| |||||||||||||||||||| |||||| ||||||||||||||||    
T  44755606 ggtgaggggtgcccttctgatttggtcctaaagtctggtgggccgatcacttttgatt 44755663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 343 - 410
Target Start/End: Original strand, 12480880 - 12480947
Alignment:
Q  343 ttctgatttggtcctaaagtttggtggaccgatcacttttgattcgagatcggcagtcaattctttgg 410  Q
    ||||||||| ||||| ||||||||||| |||||| |||||||||||||||||| ||||| ||||||||    
T  12480880 ttctgattttgtcctgaagtttggtgggccgatcgcttttgattcgagatcgggagtcagttctttgg 12480947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 328 - 410
Target Start/End: Original strand, 34389941 - 34390023
Alignment:
Q  328 gggtgaggggtgcctttctgatttggtcctaaagtttggtggaccgatcacttttgattcgagatcggcagtcaattctttgg 410  Q
    |||||||| ||||| | ||||||||||  |||||| |||||| ||||||||||||||||||||||||| |||||  |||||||    
T  34389941 gggtgaggagtgccctgctgatttggttttaaagtctggtgggccgatcacttttgattcgagatcgggagtcagctctttgg 34390023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 327 - 407
Target Start/End: Original strand, 25160793 - 25160873
Alignment:
Q  327 agggtgaggggtgcctttctgatttggtcctaaagtttggtggaccgatcacttttgattcgagatcggcagtcaattctt 407  Q
    |||| |||||||||| | || ||||||| ||| ||| |||||||||||| ||||||||||||||||||| |||||| ||||    
T  25160793 agggcgaggggtgccctgctaatttggttctatagtctggtggaccgattacttttgattcgagatcggaagtcaaatctt 25160873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 591 - 673
Target Start/End: Complemental strand, 6492934 - 6492852
Alignment:
Q  591 aggagtatgttttaggtggtaacgtatattttggtgggtgttatcatcatgggtgttttttatagtatttattttcgggtgtt 673  Q
    |||||| ||||||||||||| ||||  |||||||||| |||| || |||| |||||||||||| || ||||||||| ||||||    
T  6492934 aggagtctgttttaggtggtgacgtgaattttggtggatgttgtcctcataggtgttttttatggtgtttattttcaggtgtt 6492852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 237 - 311
Target Start/End: Original strand, 44755490 - 44755564
Alignment:
Q  237 gtcatactttttgtgtgttggttgtcggtgggccggttacttttgcttcaagatcgggagtcggtgtctagctgc 311  Q
    ||||||||||||||||| |||||  |||||||||  ||| ||||||||  || ||||||||||||||||||||||    
T  44755490 gtcatactttttgtgtgctggttagcggtgggcccattaattttgctttgaggtcgggagtcggtgtctagctgc 44755564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 357 - 406
Target Start/End: Original strand, 9349757 - 9349806
Alignment:
Q  357 taaagtttggtggaccgatcacttttgattcgagatcggcagtcaattct 406  Q
    |||||| |||||| ||||||||||||||||||||||||| ||||||||||    
T  9349757 taaagtctggtgggccgatcacttttgattcgagatcgggagtcaattct 9349806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 332 - 409
Target Start/End: Original strand, 10244165 - 10244242
Alignment:
Q  332 gaggggtgcctttctgatttggtcctaaagtttggtggaccgatcacttttgattcgagatcggcagtcaattctttg 409  Q
    |||||||||| | || ||||||| ||| | | |||||| ||||||||||||||||||||||||| ||||| |||||||    
T  10244165 gaggggtgccctgctaatttggtgctataatctggtgggccgatcacttttgattcgagatcgggagtcagttctttg 10244242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 333 - 410
Target Start/End: Original strand, 13311823 - 13311900
Alignment:
Q  333 aggggtgcctttctgatttggtcctaaagtttggtggaccgatcacttttgattcgagatcggcagtcaattctttgg 410  Q
    |||||||||  |||| ||||||| |  ||| |||||| ||||||||||||||||||||||||| ||||| ||||||||    
T  13311823 aggggtgcccgtctggtttggtcatgtagtctggtgggccgatcacttttgattcgagatcgggagtcagttctttgg 13311900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 332 - 409
Target Start/End: Original strand, 38306244 - 38306321
Alignment:
Q  332 gaggggtgcctttctgatttggtcctaaagtttggtggaccgatcacttttgattcgagatcggcagtcaattctttg 409  Q
    |||||||||| | || ||||||| ||| ||| |||||| |||||||||||||||||||||| || ||||| |||||||    
T  38306244 gaggggtgccctgctaatttggtactatagtctggtgggccgatcacttttgattcgagattgggagtcagttctttg 38306321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 328 - 401
Target Start/End: Original strand, 38485535 - 38485608
Alignment:
Q  328 gggtgaggggtgcctttctgatttggtcctaaagtttggtggaccgatcacttttgattcgagatcggcagtca 401  Q
    |||| ||||||||| |||||| || || || |||| |||||| ||||||||||||||||||||||||| |||||    
T  38485535 gggtaaggggtgcccttctgaatttgttctgaagtctggtgggccgatcacttttgattcgagatcgggagtca 38485608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 348 - 401
Target Start/End: Complemental strand, 41089830 - 41089777
Alignment:
Q  348 atttggtcctaaagtttggtggaccgatcacttttgattcgagatcggcagtca 401  Q
    ||||||| ||||||| ||||||||||||||||||||||||||||| || |||||    
T  41089830 atttggtactaaagtctggtggaccgatcacttttgattcgagattgggagtca 41089777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 585 - 673
Target Start/End: Complemental strand, 24324607 - 24324520
Alignment:
Q  585 tcgtgtaggagtatgttttaggtggtaacgtatattttggtgggtgttatcatcatgggtgttttttatagtatttattttcgggtgtt 673  Q
    ||||| |||||| ||||||| ||||| |||| |||||||||| ||||| || ||| |||||||||| | ||| ||||||||||||||||    
T  24324607 tcgtgaaggagtctgttttaagtggtgacgtgtattttggtgagtgttgtcctcaagggtgttttt-agagtgtttattttcgggtgtt 24324520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 440 - 523
Target Start/End: Original strand, 23983298 - 23983381
Alignment:
Q  440 ttctttcggtgaatcagaggtcgagaggtggtggaagttgattgatctttcagataggagcttttcggatgcggctcagctttg 523  Q
    ||||||||||| ||| ||||| |||||||||||  |||||| |||||||||  ||| |||||||||||||  || |||||||||    
T  23983298 ttctttcggtgtatcggaggttgagaggtggtgacagttgaatgatctttcgaatatgagcttttcggatctggttcagctttg 23983381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 250 - 313
Target Start/End: Complemental strand, 35746031 - 35745968
Alignment:
Q  250 tgtgttggttgtcggtgggccggttacttttgcttcaagatcgggagtcggtgtctagctgcaa 313  Q
    |||||||||| ||||||| ||||||||||||||||| ||||||| ||| |||| ||||| ||||    
T  35746031 tgtgttggttttcggtggaccggttacttttgcttcgagatcggaagttggtgactagcagcaa 35745968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 327 - 405
Target Start/End: Original strand, 23983174 - 23983251
Alignment:
Q  327 agggtgaggggtgcctttctgatttggtcctaaagtttggtggaccgatcacttttgattcgagatcggcagtcaattc 405  Q
    ||||||||||||||||| || |||||||| | |||| ||||||  |||||  ||||||||||||||||| |||||||||    
T  23983174 agggtgaggggtgcctt-ctaatttggtcttgaagtctggtgggtcgatcgtttttgattcgagatcgggagtcaattc 23983251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 95 - 208
Target Start/End: Original strand, 37794725 - 37794838
Alignment:
Q  95 tgttcgtagtcagtaactcttgtt-gtggtttttagggttgttaaggtgtttagggtgtttgaaggaagtgggtctcgttgtgttgagctttttcctttt 193  Q
    ||||||| |||| || |||||||| ||| ||||| |||| ||| ||||||||| || |||||||||  ||| ||| | ||||||||||| ||||||||||    
T  37794725 tgttcgtcgtcactagctcttgtttgtgcttttt-gggtggtttaggtgtttacggagtttgaagggtgtgtgtcacattgtgttgagcattttcctttt 37794823  T
Q  194 gatcagtttgttgtt 208  Q
    |||  ||||||||||    
T  37794824 gatttgtttgttgtt 37794838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 247 - 313
Target Start/End: Original strand, 37794872 - 37794938
Alignment:
Q  247 ttgtgtgttggttgtcggtgggccggttacttttgcttcaagatcgggagtcggtgtctagctgcaa 313  Q
    ||||||| ||||| ||||||||||||||  ||| ||||| ||||||||||| || ||||||||||||    
T  37794872 ttgtgtgctggttttcggtgggccggttcatttggcttcgagatcgggagttggggtctagctgcaa 37794938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 247 - 313
Target Start/End: Original strand, 38306133 - 38306199
Alignment:
Q  247 ttgtgtgttggttgtcggtgggccggttacttttgcttcaagatcgggagtcggtgtctagctgcaa 313  Q
    ||||||| ||||| ||||||||||||||  ||| ||||| ||| |||||||||| ||||||||||||    
T  38306133 ttgtgtgctggttttcggtgggccggttcatttggcttcgagaacgggagtcggggtctagctgcaa 38306199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 435 - 489
Target Start/End: Original strand, 44755675 - 44755729
Alignment:
Q  435 atggtttctttcggtgaatcagaggtcgagaggtggtggaagttgattgatcttt 489  Q
    |||||||||||||||  |||||||||||| |||||||||||| ||| ||||||||    
T  44755675 atggtttctttcggtatatcagaggtcgataggtggtggaagctgaatgatcttt 44755729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 348 - 401
Target Start/End: Complemental strand, 3419738 - 3419685
Alignment:
Q  348 atttggtcctaaagtttggtggaccgatcacttttgattcgagatcggcagtca 401  Q
    ||||||| ||||||| |||||| | ||||||||||||||||||||||| |||||    
T  3419738 atttggtactaaagtgtggtgggctgatcacttttgattcgagatcgggagtca 3419685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 332 - 409
Target Start/End: Complemental strand, 5860386 - 5860309
Alignment:
Q  332 gaggggtgcctttctgatttggtcctaaagtttggtggaccgatcacttttgattcgagatcggcagtcaattctttg 409  Q
    |||||||||| | || ||||||| ||| |||  ||||| || ||| |||||||||||||||||| |||||||||||||    
T  5860386 gaggggtgccctgctaatttggtactatagtccggtgggcctatcgcttttgattcgagatcgggagtcaattctttg 5860309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 348 - 409
Target Start/End: Original strand, 33435108 - 33435169
Alignment:
Q  348 atttggtcctaaagtttggtggaccgatcacttttgattcgagatcggcagtcaattctttg 409  Q
    ||||||| ||||||| |||||   |||||||||||||||||||||||| ||||| |||||||    
T  33435108 atttggtactaaagtctggtgagacgatcacttttgattcgagatcgggagtcagttctttg 33435169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 332 - 401
Target Start/End: Complemental strand, 47325983 - 47325914
Alignment:
Q  332 gaggggtgcctttctgatttggtcctaaagtttggtggaccgatcacttttgattcgagatcggcagtca 401  Q
    |||||||||||| || ||||||| ||| ||| |||||| |||||| ||||||||| |||||||| |||||    
T  47325983 gaggggtgccttgctaatttggtactatagtctggtgggccgatcgcttttgatttgagatcgggagtca 47325914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 265 - 313
Target Start/End: Original strand, 3478243 - 3478291
Alignment:
Q  265 tgggccggttacttttgcttcaagatcgggagtcggtgtctagctgcaa 313  Q
    ||||||| |||||||||||||  ||||||||||||||| ||||||||||    
T  3478243 tgggccgattacttttgcttcgggatcgggagtcggtgactagctgcaa 3478291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 117 - 209
Target Start/End: Original strand, 33434856 - 33434948
Alignment:
Q  117 ttgtggtttttagggttgttaaggtgtttagggtgtttgaaggaagtgggtctcgttgtgttgagctttttccttttgatcagtttgttgttt 209  Q
    ||||| ||||| |||| ||| |||| ||||||||||||| ||| || ||||| |||||||| |||| ||||||||| |||  ||| |||||||    
T  33434856 ttgtgcttttttgggtggtttaggtatttagggtgtttggagggagcgggtcccgttgtgtcgagccttttcctttcgataggttggttgttt 33434948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 247 - 307
Target Start/End: Original strand, 33434982 - 33435042
Alignment:
Q  247 ttgtgtgttggttgtcggtgggccggttacttttgcttcaagatcgggagtcggtgtctag 307  Q
    |||||||||||||  |||||||||| ||||||||||||| ||||||| |||| | ||||||    
T  33434982 ttgtgtgttggtttccggtgggccgattacttttgcttcgagatcggtagtccgggtctag 33435042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 364 - 395
Target Start/End: Complemental strand, 27993602 - 27993571
Alignment:
Q  364 tggtggaccgatcacttttgattcgagatcgg 395  Q
    ||||||||||||||||||||||||||||||||    
T  27993602 tggtggaccgatcacttttgattcgagatcgg 27993571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 247 - 313
Target Start/End: Complemental strand, 3419865 - 3419799
Alignment:
Q  247 ttgtgtgttggttgtcggtgggccggttacttttgcttcaagatcgggagtcggtgtctagctgcaa 313  Q
    ||||||| ||||| |||| | |||||||  ||| ||||| |||||||||||||| ||||||||||||    
T  3419865 ttgtgtgctggttttcggcgagccggttcatttggcttcgagatcgggagtcggggtctagctgcaa 3419799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 235 - 305
Target Start/End: Original strand, 12480749 - 12480818
Alignment:
Q  235 ttgtcatactttttgtgtgttggttgtcggtgggccggttacttttgcttcaagatcgggagtcggtgtct 305  Q
    ||||| ||| ||||||||||||| ||| ||||||||| ||| ||||||||| ||||||||||  |||||||    
T  12480749 ttgtcttaccttttgtgtgttggatgttggtgggccgatta-ttttgcttcgagatcgggagctggtgtct 12480818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 364 - 394
Target Start/End: Original strand, 25153235 - 25153265
Alignment:
Q  364 tggtggaccgatcacttttgattcgagatcg 394  Q
    |||||||||||||||||||||||||||||||    
T  25153235 tggtggaccgatcacttttgattcgagatcg 25153265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 332 - 410
Target Start/End: Complemental strand, 35745925 - 35745847
Alignment:
Q  332 gaggggtgcctttctgatttggtcctaaagtttggtggaccgatcacttttgattcgagatcggcagtcaattctttgg 410  Q
    |||||||||| | || |||| || ||||||| || ||| | ||||||||||||||||||||||| |||||  |||||||    
T  35745925 gaggggtgccctactaattttgttctaaagtctgatgggctgatcacttttgattcgagatcggaagtcatctctttgg 35745847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 247 - 313
Target Start/End: Complemental strand, 47326094 - 47326028
Alignment:
Q  247 ttgtgtgttggttgtcggtgggccggttacttttgcttcaagatcgggagtcggtgtctagctgcaa 313  Q
    ||||||| ||||| ||| ||||||||||  ||| ||||| |||||||||||||| ||||||| ||||    
T  47326094 ttgtgtgctggttttcgatgggccggttcatttggcttcgagatcgggagtcggggtctagcagcaa 47326028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 440 - 529
Target Start/End: Original strand, 3478443 - 3478532
Alignment:
Q  440 ttctttcggtgaatcagaggtcgagaggtggtggaagttgattgatctttcagataggagcttttcggatgcggctcagctttggtgttg 529  Q
    ||||||||||| ||| ||| ||||||||||| ||||| ||| ||||||||| |||  || |||||| ||   |||| |||||||||||||    
T  3478443 ttctttcggtggatcggagatcgagaggtggcggaagctgaatgatctttcggatgtgaacttttctgagttggctaagctttggtgttg 3478532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 348 - 409
Target Start/End: Original strand, 3867115 - 3867176
Alignment:
Q  348 atttggtcctaaagtttggtggaccgatcacttttgattcgagatcggcagtcaattctttg 409  Q
    ||||||| ||||| | |||||| | ||||||||||||||||||| ||| ||||| |||||||    
T  3867115 atttggtactaaaatatggtgggctgatcacttttgattcgagaccgggagtcagttctttg 3867176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 264 - 309
Target Start/End: Complemental strand, 11379318 - 11379273
Alignment:
Q  264 gtgggccggttacttttgcttcaagatcgggagtcggtgtctagct 309  Q
    ||||| |||||| ||||| ||||||||||||||| |||||||||||    
T  11379318 gtgggtcggttatttttgattcaagatcgggagttggtgtctagct 11379273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 332 - 409
Target Start/End: Original strand, 37794972 - 37795049
Alignment:
Q  332 gaggggtgcctttctgatttggtcctaaagtttggtggaccgatcacttttgattcgagatcggcagtcaattctttg 409  Q
    |||||||||| | || |||||||  || ||| |||||| ||| ||| ||||||||||||||||| ||||| |||||||    
T  37794972 gaggggtgccctgctaatttggtaatatagtatggtgggccgttcagttttgattcgagatcgggagtcagttctttg 37795049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 337 - 406
Target Start/End: Complemental strand, 46133371 - 46133302
Alignment:
Q  337 gtgcctttctgatttggtcctaaagtttggtggaccgatcacttttgattcgagatcggcagtcaattct 406  Q
    ||||| |||||||||||| || |||| |||||  |||||| ||||||||| |||||||| ||||| ||||    
T  46133371 gtgcccttctgatttggtgctgaagtctggtgagccgatcgcttttgatttgagatcgggagtcagttct 46133302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 80; Significance: 4e-37; HSPs: 53)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 123 - 313
Target Start/End: Complemental strand, 37770971 - 37770783
Alignment:
Q  123 tttttagggttgttaaggtgttt-agggtgtttgaaggaagtgggtctcgttgtgttgagctttttccttttgatcagtttgttgtttgcacgaccgcat 221  Q
    ||||| ||||||||||||||||| |||||||||| ||||| ||||||  |||||||||||||| |||||||||||   || ||||||||||| ||||       
T  37770971 tttttggggttgttaaggtgttttagggtgtttggaggaaatgggtcatgttgtgttgagcttcttccttttgatttattcgttgtttgcaccaccg--- 37770875  T
Q  222 atatatcacgtcg-ttgtcatactttttgtgtgttggttgtcggtgggccggttacttttgcttcaagatcgggagtcggtgtctagctgcaa 313  Q
     ||||||  |||| ||||||| |||||||| || ||||| ||||||||||||||||||||||||| ||||||||||| |||||||||| ||||    
T  37770874 -tatatcttgtcgtttgtcatgctttttgtttgctggttatcggtgggccggttacttttgcttcgagatcgggagttggtgtctagcagcaa 37770783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 327 - 528
Target Start/End: Complemental strand, 37770744 - 37770544
Alignment:
Q  327 agggtgaggggtgcctttctgatttggtcctaaagtttggtggaccgatcacttttgattcgagatcggcagtcaattctttggatcagnnnnnnnnnnn 426  Q
    |||||||||||||||  |||||||||||||||| ||||||||| |||||||||||||||||  |||| | |||||||||||| |||||                
T  37770744 agggtgaggggtgcccatctgatttggtcctaaggtttggtgggccgatcacttttgattctggatcaggagtcaattctttagatca-attttggtttt 37770646  T
Q  427 nnnnnnnnatggtttctttcggtgaatcagaggtcgagaggtggtggaagttgattgatctttcagataggagcttttcggatgcggctcagctttggtg 526  Q
            |||||||||||||||||||| |||||||||||||| |||||| ||| |||||||||||||| ||||||||| || | ||||| |||||||||    
T  37770645 gggcttttatggtttctttcggtgaatcggaggtcgagaggtgttggaagctgaatgatctttcagatatgagcttttctgaggtggctcggctttggtg 37770546  T
Q  527 tt 528  Q
    ||    
T  37770545 tt 37770544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 440 - 529
Target Start/End: Complemental strand, 10173567 - 10173478
Alignment:
Q  440 ttctttcggtgaatcagaggtcgagaggtggtggaagttgattgatctttcagataggagcttttcggatgcggctcagctttggtgttg 529  Q
    ||||||||||||||| ||||||||||||||||||||||||| ||||||||   ||| |||||||||||||| ||||||||||||||||||    
T  10173567 ttctttcggtgaatcggaggtcgagaggtggtggaagttgaatgatcttttgaatatgagcttttcggatgtggctcagctttggtgttg 10173478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 329 - 529
Target Start/End: Original strand, 1269463 - 1269664
Alignment:
Q  329 ggtgaggggtgcctttctgatttggtcctaaagtttggtggaccgatcacttttgattcgagatcggcagtcaattctttggatcagnnnnnnnnnnnnn 428  Q
    ||||||||||||| ||||||||| |||||||||| |||||| ||||||||||||||||||||||||| ||||| |||||||| |||                  
T  1269463 ggtgaggggtgcccttctgatttagtcctaaagtctggtgggccgatcacttttgattcgagatcggaagtcagttctttggctcaagtttggttttggg 1269562  T
Q  429 nnnnnnatggtttctttcggtgaatcagaggtcgagaggtggtggaagttgattgatc-tttcagataggagcttttcggatgcggctcagctttggtgt 527  Q
          |||||||||||| ||| ||| ||||||||||| ||||||||| ||| | ||| |||| ||||||||||||||| ||| ||||| ||||||||||    
T  1269563 atttttatggtttctttcagtggatcggaggtcgagagttggtggaagctgaataatcttttcggataggagcttttcgaatgtggctctgctttggtgt 1269662  T
Q  528 tg 529  Q
    ||    
T  1269663 tg 1269664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 436 - 528
Target Start/End: Original strand, 34230288 - 34230380
Alignment:
Q  436 tggtttctttcggtgaatcagaggtcgagaggtggtggaagttgattgatctttcagataggagcttttcggatgcggctcagctttggtgtt 528  Q
    ||||||||||||||| ||| ||||| ||||||||||||||| ||| |||||||||| ||| ||||||||| |||| |||||| ||||||||||    
T  34230288 tggtttctttcggtggatcggaggttgagaggtggtggaagctgaatgatctttcaaataagagcttttcagatgtggctcaactttggtgtt 34230380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 74 - 309
Target Start/End: Complemental strand, 41087165 - 41086932
Alignment:
Q  74 agcctctggtattcggatccttgttcgtagtcagtaactcttgt-tgtggtttttagggttgttaaggtgtttagggtgtttgaaggaagtgggtctcgt 172  Q
    |||||||| || |||| ||||| ||||| || | || ||||||| || | ||||| ||||||||||||||| ||||||||||| ||| || ||||| |||    
T  41087165 agcctctgttactcgggtccttattcgtcgttactagctcttgtatgcgttttttggggttgttaaggtgtctagggtgtttggaggtagcgggtcccgt 41087066  T
Q  173 tgtgttgagctttttccttttgatcagtttgttgtttgcacgaccgcatatatatcacgtcgttgtcatactttttgtgtgttggttgtcggtgggccgg 272  Q
    || | | ||| ||||||| |||||| |||||||| |||||| ||||| ||| | |  |||  ||||| ||||| |||||||  ||||  |||||| |||     
T  41087065 tgagctaagccttttcctattgatctgtttgttgcttgcactaccgcttatct-tgtcgt--ttgtcctacttgttgtgtgcaggtttccggtggaccga 41086969  T
Q  273 ttacttttgcttcaagatcgggagtcggtgtctagct 309  Q
    ||||||||||||  ||||||||| |||||||| ||||    
T  41086968 ttacttttgctttgagatcgggaatcggtgtccagct 41086932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 327 - 415
Target Start/End: Complemental strand, 14106627 - 14106539
Alignment:
Q  327 agggtgaggggtgcctttctgatttggtcctaaagtttggtggaccgatcacttttgattcgagatcggcagtcaattctttggatcag 415  Q
    |||| |||||||||| | |||||||||||||||||| |||||| ||||||||||||||||| ||||||| |||||  ||||| ||||||    
T  14106627 agggcgaggggtgccctgctgatttggtcctaaagtctggtgggccgatcacttttgattcaagatcgggagtcagctctttagatcag 14106539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 97 - 312
Target Start/End: Original strand, 1269208 - 1269420
Alignment:
Q  97 ttcgtagtcagtaactcttgttgtggtttttagggttgttaaggtgtttagggtgtttgaaggaagtgggtctcgttgtgttgagctttttccttttgat 196  Q
    ||||| |||| || ||||||||   |||||| |||||||||| ||||||| |||||||| ||| ||  | |||| ||| | | ||| ||||||||| |||    
T  1269208 ttcgtcgtcactagctcttgtttgcgtttttggggttgttaaagtgtttatggtgtttggagggagccgatctcattgagctaagccttttcctttggat 1269307  T
Q  197 cagtttgttgtttgcacgaccgcatatatatcacgtcgtt-gtcatactttttgtgtgttggttgtcggtgggccggttacttttgcttcaagatcggga 295  Q
      ||||||||||||||| |||    || ||||| |||||| ||| |||| ||||| || |||||  || |||| |||||| ||||||||| |||||||||    
T  1269308 atgtttgttgtttgcaccacc----atctatcatgtcgtttgtcttactgtttgtatgctggttcccgatgggtcggttaattttgcttcgagatcggga 1269403  T
Q  296 gtcggtgtctagctgca 312  Q
    |||| ||||||||||||    
T  1269404 gtcgatgtctagctgca 1269420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 245 - 311
Target Start/End: Complemental strand, 22885342 - 22885276
Alignment:
Q  245 ttttgtgtgttggttgtcggtgggccggttacttttgcttcaagatcgggagtcggtgtctagctgc 311  Q
    ||||||||||||| ||  ||||||||||||||||||||||| ||||||||||| |||||||||||||    
T  22885342 ttttgtgtgttggatgctggtgggccggttacttttgcttcgagatcgggagttggtgtctagctgc 22885276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 440 - 529
Target Start/End: Complemental strand, 16952372 - 16952283
Alignment:
Q  440 ttctttcggtgaatcagaggtcgagaggtggtggaagttgattgatctttcagataggagcttttcggatgcggctcagctttggtgttg 529  Q
    ||||||||||| ||| ||||| ||||||||||||||| | |  |||||||| ||||||||||||||||||| || ||| |||||||||||    
T  16952372 ttctttcggtggatcggaggttgagaggtggtggaagctaaacgatctttcggataggagcttttcggatgtggatcaactttggtgttg 16952283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 440 - 529
Target Start/End: Complemental strand, 17023037 - 17022948
Alignment:
Q  440 ttctttcggtgaatcagaggtcgagaggtggtggaagttgattgatctttcagataggagcttttcggatgcggctcagctttggtgttg 529  Q
    ||||||||||| ||| ||||| ||||||||||||||| | |  |||||||| ||||||||||||||||||| || ||| |||||||||||    
T  17023037 ttctttcggtggatcggaggttgagaggtggtggaagctaaacgatctttcggataggagcttttcggatgtggatcaactttggtgttg 17022948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 440 - 529
Target Start/End: Complemental strand, 17060343 - 17060254
Alignment:
Q  440 ttctttcggtgaatcagaggtcgagaggtggtggaagttgattgatctttcagataggagcttttcggatgcggctcagctttggtgttg 529  Q
    ||||||||||| ||| ||||| ||||||||||||||| | |  |||||||| ||||||||||||||||||| || ||| |||||||||||    
T  17060343 ttctttcggtggatcggaggttgagaggtggtggaagctaaacgatctttcggataggagcttttcggatgtggatcaactttggtgttg 17060254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 437 - 528
Target Start/End: Original strand, 7696050 - 7696141
Alignment:
Q  437 ggtttctttcggtgaatcagaggtcgagaggtggtggaagttgattgatctttcagataggagcttttcggatgcggctcagctttggtgtt 528  Q
    |||||||||||||| |||  |||||| ||||||||||||| ||| ||||||||| |||||||| |||  ||||| |||||| ||||||||||    
T  7696050 ggtttctttcggtggatcgaaggtcgggaggtggtggaagctgaatgatctttcggataggagatttgaggatgtggctcaactttggtgtt 7696141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 435 - 510
Target Start/End: Complemental strand, 41086792 - 41086717
Alignment:
Q  435 atggtttctttcggtgaatcagaggtcgagaggtggtggaagttgattgatctttcagataggagcttttcggatg 510  Q
    |||||| ||||||||| ||| ||||||||||||||||||||| ||| ||||||||| |||| |||||||| |||||    
T  41086792 atggttcctttcggtggatcggaggtcgagaggtggtggaagctgaatgatctttcggataagagctttttggatg 41086717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 247 - 313
Target Start/End: Complemental strand, 14106732 - 14106666
Alignment:
Q  247 ttgtgtgttggttgtcggtgggccggttacttttgcttcaagatcgggagtcggtgtctagctgcaa 313  Q
    |||||||||||||  |||||||||||||||||||||||| |||  ||||||||||| ||||||||||    
T  14106732 ttgtgtgttggtttccggtgggccggttacttttgcttcgagacagggagtcggtgactagctgcaa 14106666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 332 - 409
Target Start/End: Original strand, 387156 - 387233
Alignment:
Q  332 gaggggtgcctttctgatttggtcctaaagtttggtggaccgatcacttttgattcgagatcggcagtcaattctttg 409  Q
    |||||||||| | || ||||||| ||||||| |||||| | |||||||||||||| |||||||| |||||||||||||    
T  387156 gaggggtgccctgctaatttggtactaaagtctggtgggctgatcacttttgatttgagatcgggagtcaattctttg 387233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 331 - 395
Target Start/End: Complemental strand, 9560887 - 9560823
Alignment:
Q  331 tgaggggtgcctttctgatttggtcctaaagtttggtggaccgatcacttttgattcgagatcgg 395  Q
    |||||||||||||  |||||||   | ||||||||||||||||||||||||||||||||||||||    
T  9560887 tgaggggtgccttgatgatttgtgtcgaaagtttggtggaccgatcacttttgattcgagatcgg 9560823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 441 - 529
Target Start/End: Complemental strand, 14106509 - 14106421
Alignment:
Q  441 tctttcggtgaatcagaggtcgagaggtggtggaagttgattgatctttcagataggagcttttcggatgcggctcagctttggtgttg 529  Q
    |||||||||| ||||||||||||||||| ||||||||||  ||||| ||| | || ||||||| || ||| |||||||||| |||||||    
T  14106509 tctttcggtggatcagaggtcgagaggttgtggaagttgtatgatcattcggttaagagctttacgaatgtggctcagcttgggtgttg 14106421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 346 - 410
Target Start/End: Original strand, 14405195 - 14405259
Alignment:
Q  346 tgatttggtcctaaagtttggtggaccgatcacttttgattcgagatcggcagtcaattctttgg 410  Q
    ||||||||| ||||||| |||||| ||||||||||||||||||||||||| |||||  |||||||    
T  14405195 tgatttggttctaaagtctggtgggccgatcacttttgattcgagatcgggagtcagctctttgg 14405259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 585 - 675
Target Start/End: Complemental strand, 41113547 - 41113460
Alignment:
Q  585 tcgtgtaggagtatgttttaggtggtaacgtatattttggtgggtgttatcatcatgggtgttttttatagtatttattttcgggtgttcc 675  Q
    ||||| |||||| |||||||||| ||||||| ||||||||||||||    | ||||||||||||||||  |||||||||||||| ||||||    
T  41113547 tcgtgaaggagtctgttttaggtagtaacgtttattttggtgggtg---ccctcatgggtgttttttagggtatttattttcggatgttcc 41113460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 335 - 401
Target Start/End: Original strand, 7874277 - 7874343
Alignment:
Q  335 gggtgcctttctgatttggtcctaaagtttggtggaccgatcacttttgattcgagatcggcagtca 401  Q
    ||||||| | |||||||||| ||||||| ||||||  |||||||||||||||||||||||| |||||    
T  7874277 gggtgccctgctgatttggttctaaagtctggtgggtcgatcacttttgattcgagatcgggagtca 7874343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 122 - 219
Target Start/End: Original strand, 7695819 - 7695916
Alignment:
Q  122 gtttttagggttgttaaggtgtttagggtgtttgaaggaagtgggtctcgttgtgttgagctttttccttttgatcagtttgttgtttgcacgaccgc 219  Q
    |||||| |||||||||||||||||||| |||||  | |||| |  |  | ||||||||||| |||||||||||||  ||||||||||||||| |||||    
T  7695819 gttttttgggttgttaaggtgtttaggctgtttagaagaagcgaattcctttgtgttgagccttttccttttgatatgtttgttgtttgcaccaccgc 7695916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 349 - 410
Target Start/End: Complemental strand, 22885214 - 22885153
Alignment:
Q  349 tttggtcctaaagtttggtggaccgatcacttttgattcgagatcggcagtcaattctttgg 410  Q
    |||| |||| |||| |||||| ||||||||||||||||||||||||| ||||| ||||||||    
T  22885214 tttgatcctgaagtctggtgggccgatcacttttgattcgagatcgggagtcagttctttgg 22885153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 266 - 311
Target Start/End: Original strand, 29487024 - 29487069
Alignment:
Q  266 gggccggttacttttgcttcaagatcgggagtcggtgtctagctgc 311  Q
    |||||||||||||||||||| ||||||||||| |||||||||||||    
T  29487024 gggccggttacttttgcttcgagatcgggagttggtgtctagctgc 29487069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 332 - 409
Target Start/End: Complemental strand, 39338963 - 39338886
Alignment:
Q  332 gaggggtgcctttctgatttggtcctaaagtttggtggaccgatcacttttgattcgagatcggcagtcaattctttg 409  Q
    |||||||||| | || ||||||| ||| ||| |||||| |||||| |||||||||||||||||| ||||| |||||||    
T  39338963 gaggggtgccctgctaatttggtactatagtctggtgggccgatcgcttttgattcgagatcgggagtcagttctttg 39338886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 328 - 408
Target Start/End: Original strand, 23650364 - 23650444
Alignment:
Q  328 gggtgaggggtgcctttctgatttggtcctaaagtttggtggaccgatcacttttgattcgagatcggcagtcaattcttt 408  Q
    ||||||||||| |||| || ||||||| ||| ||| |||||| | |||| |||||||||||||||||| ||||| ||||||    
T  23650364 gggtgaggggtaccttacttatttggttctagagtctggtgggctgatcgcttttgattcgagatcgggagtcatttcttt 23650444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 263 - 306
Target Start/End: Original strand, 4471813 - 4471856
Alignment:
Q  263 ggtgggccggttacttttgcttcaagatcgggagtcggtgtcta 306  Q
    ||||||||||||||||||||||||||||||||||| || |||||    
T  4471813 ggtgggccggttacttttgcttcaagatcgggagttggcgtcta 4471856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 262 - 313
Target Start/End: Original strand, 7874180 - 7874231
Alignment:
Q  262 cggtgggccggttacttttgcttcaagatcgggagtcggtgtctagctgcaa 313  Q
    |||||||||||||  ||||||||| ||||||||||| |||||||||||||||    
T  7874180 cggtgggccggttttttttgcttcgagatcgggagttggtgtctagctgcaa 7874231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 184 - 313
Target Start/End: Complemental strand, 10173848 - 10173721
Alignment:
Q  184 ttttccttttgatcagtttgttgtttgcacgaccgcatatatatcacgtcgtt--gtcatactttttgtgtgttggttgtcggtgggccggttacttttg 281  Q
    |||||||||||||  |||||| |||||||| |||||||||    || ||||||  ||| || || |||||| ||||||  ||||| || |||||||||||    
T  10173848 ttttccttttgatttgtttgtggtttgcaccaccgcatat----catgtcgttttgtcttatttattgtgtattggtttccggtgtgctggttacttttg 10173753  T
Q  282 cttcaagatcgggagtcggtgtctagctgcaa 313  Q
     |||  |||||| |||||||||||||||||||    
T  10173752 tttcgggatcggaagtcggtgtctagctgcaa 10173721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 348 - 403
Target Start/End: Original strand, 10524096 - 10524151
Alignment:
Q  348 atttggtcctaaagtttggtggaccgatcacttttgattcgagatcggcagtcaat 403  Q
    ||||||| ||| ||| |||||| ||||||||||||||||||||||||| |||||||    
T  10524096 atttggtgctatagtctggtgggccgatcacttttgattcgagatcgggagtcaat 10524151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 334 - 409
Target Start/End: Original strand, 13337259 - 13337334
Alignment:
Q  334 ggggtgcctttctgatttggtcctaaagtttggtggaccgatcacttttgattcgagatcggcagtcaattctttg 409  Q
    |||||||| ||||||||||  | |||||| || ||| ||||||||||||||||||| ||||| ||||| |||||||    
T  13337259 ggggtgcccttctgatttgaccttaaagtctgatgggccgatcacttttgattcgaaatcggaagtcagttctttg 13337334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 435 - 502
Target Start/End: Original strand, 13337360 - 13337427
Alignment:
Q  435 atggtttctttcggtgaatcagaggtcgagaggtggtggaagttgattgatctttcagataggagctt 502  Q
    |||||||||||||||| ||  ||||||||||||||||| |   ||| |||||||||||||||||||||    
T  13337360 atggtttctttcggtggataggaggtcgagaggtggtgaacactgaatgatctttcagataggagctt 13337427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 440 - 487
Target Start/End: Complemental strand, 22885123 - 22885076
Alignment:
Q  440 ttctttcggtgaatcagaggtcgagaggtggtggaagttgattgatct 487  Q
    ||||||||||| | ||||||| ||||||||||||||||||||||||||    
T  22885123 ttctttcggtggaccagaggttgagaggtggtggaagttgattgatct 22885076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 440 - 487
Target Start/End: Complemental strand, 33788622 - 33788575
Alignment:
Q  440 ttctttcggtgaatcagaggtcgagaggtggtggaagttgattgatct 487  Q
    ||||||||||||| ||||||| ||||||||||||||| ||||||||||    
T  33788622 ttctttcggtgaaccagaggttgagaggtggtggaagctgattgatct 33788575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 349 - 399
Target Start/End: Complemental strand, 10173659 - 10173609
Alignment:
Q  349 tttggtcctaaagtttggtggaccgatcacttttgattcgagatcggcagt 399  Q
    |||||||||||||| | |||| ||||||||||||||||||||||||| |||    
T  10173659 tttggtcctaaagtctagtgggccgatcacttttgattcgagatcggaagt 10173609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 352 - 410
Target Start/End: Original strand, 16959985 - 16960043
Alignment:
Q  352 ggtcctaaagtttggtggaccgatcacttttgattcgagatcggcagtcaattctttgg 410  Q
    ||||||||||| |||||| |||||| |||||||||||||||||  ||||| ||||||||    
T  16959985 ggtcctaaagtctggtgggccgatcgcttttgattcgagatcgagagtcagttctttgg 16960043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 333 - 415
Target Start/End: Complemental strand, 25505006 - 25504924
Alignment:
Q  333 aggggtgcctttctgatttggtcctaaagtttggtggaccgatcacttttgattcgagatcggcagtcaattctttggatcag 415  Q
    ||||||||| || |||||||||| |  ||| ||||||||| ||| ||||| |||||||||||| ||||| |||||||| ||||    
T  25505006 aggggtgcccttatgatttggtcttgcagtctggtggacctatcgcttttaattcgagatcgggagtcagttctttggttcag 25504924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 585 - 675
Target Start/End: Complemental strand, 37770458 - 37770370
Alignment:
Q  585 tcgtgtaggagtatgttttaggtggtaacgtatattttggtgggtgttatcatcatgggtgttttttatagtatttattttcgggtgttcc 675  Q
    ||||| |||||| ||||||||||||| ||||  ||||||||||||| |||| |||| |||| ||||||  || ||||||||||||||||||    
T  37770458 tcgtgaaggagtctgttttaggtggtgacgtggattttggtgggtggtatcctcat-ggtg-tttttagggtgtttattttcgggtgttcc 37770370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 247 - 313
Target Start/End: Complemental strand, 39339074 - 39339008
Alignment:
Q  247 ttgtgtgttggttgtcggtgggccggttacttttgcttcaagatcgggagtcggtgtctagctgcaa 313  Q
    ||||||| ||||| |||||||||| |||  ||| ||||| |||||||||||||| ||||||||||||    
T  39339074 ttgtgtgctggttttcggtgggccagttcatttggcttcgagatcgggagtcggggtctagctgcaa 39339008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 263 - 312
Target Start/End: Original strand, 2062797 - 2062846
Alignment:
Q  263 ggtgggccggttacttttgcttcaagatcgggagtcggtgtctagctgca 312  Q
    ||||||||  ||||||||||||| ||||||||||| ||||||||||||||    
T  2062797 ggtgggccaattacttttgcttcgagatcgggagttggtgtctagctgca 2062846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 133 - 313
Target Start/End: Original strand, 17105173 - 17105350
Alignment:
Q  133 tgttaaggtgtttagggtgtttgaaggaagtgggtctcgttgtgttgagctttttccttttgatcagtttgttgtttgcacgaccgcatatatatcacgt 232  Q
    ||||||||||||||||||||||  |||  |   ||| ||||||| ||||| |||||||||||||  ||||| ||||||||| | | |||||    || ||    
T  17105173 tgttaaggtgtttagggtgtttagagggtgcttgtcccgttgtgatgagccttttccttttgatttgtttggtgtttgcaccatctcatat----catgt 17105268  T
Q  233 cgttg-tcatactttttgtgtgttggttgtcggtgggccggttacttttgcttcaagatcgggagtcggtgtctagctgcaa 313  Q
    | ||  || ||| | ||||||| |||||  ||||||| |||||||||||||||  ||||  |||||||| ||||||||||||    
T  17105269 ctttcatcttacatattgtgtgctggtttccggtgggtcggttacttttgcttggagataaggagtcggcgtctagctgcaa 17105350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 346 - 414
Target Start/End: Original strand, 34230198 - 34230266
Alignment:
Q  346 tgatttggtcctaaagtttggtggaccgatcacttttgattcgagatcggcagtcaattctttggatca 414  Q
    ||||||| || ||||||||| ||| ||||||| |||| |||||||||| | ||||| ||||||||||||    
T  34230198 tgatttgatcgtaaagtttgatgggccgatcattttttattcgagatcaggagtcagttctttggatca 34230266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 328 - 394
Target Start/End: Original strand, 17105390 - 17105457
Alignment:
Q  328 gggtgaggggtgcctttctgatttggtcctaaagtttggtggaccgatcac-ttttgattcgagatcg 394  Q
    |||||||||||||| | |||||||||| || |||| || ||| |||||||| ||||||||||||||||    
T  17105390 gggtgaggggtgccctactgatttggtactgaagtctgatgggccgatcactttttgattcgagatcg 17105457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 331 - 393
Target Start/End: Original strand, 8520384 - 8520446
Alignment:
Q  331 tgaggggtgcctttctgatttggtcctaaagtttggtggaccgatcacttttgattcgagatc 393  Q
    |||||||||||||  ||||||| | ||| ||| || |||||| ||||||||||||||||||||    
T  8520384 tgaggggtgccttagtgatttgtttctagagtctgatggaccaatcacttttgattcgagatc 8520446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 593 - 647
Target Start/End: Complemental strand, 13699105 - 13699051
Alignment:
Q  593 gagtatgttttaggtggtaacgtatattttggtgggtgttatcatcatgggtgtt 647  Q
    |||| ||||||||||||| | || ||||||||||||||||||| ||| |||||||    
T  13699105 gagtgtgttttaggtggtgatgtttattttggtgggtgttatcttcaggggtgtt 13699051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 352 - 410
Target Start/End: Complemental strand, 15126488 - 15126430
Alignment:
Q  352 ggtcctaaagtttggtggaccgatcacttttgattcgagatcggcagtcaattctttgg 410  Q
    |||||| |||| |||||| ||||||| ||||||||||||||||| ||||  ||||||||    
T  15126488 ggtcctgaagtctggtgggccgatcatttttgattcgagatcgggagtcggttctttgg 15126430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 335 - 393
Target Start/End: Complemental strand, 41086883 - 41086825
Alignment:
Q  335 gggtgcctttctgatttggtcctaaagtttggtggaccgatcacttttgattcgagatc 393  Q
    ||||||| ||||||||||||| || ||| ||||||  | ||||||||||||||||||||    
T  41086883 gggtgcccttctgatttggtcatatagtctggtgggtcaatcacttttgattcgagatc 41086825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 263 - 312
Target Start/End: Original strand, 3745249 - 3745298
Alignment:
Q  263 ggtgggccggttacttttgcttcaagatcgggagtcggtgtctagctgca 312  Q
    |||||||||||||||||| |||  ||||||||||| || |||||||||||    
T  3745249 ggtgggccggttacttttactttgagatcgggagttggcgtctagctgca 3745298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 344 - 409
Target Start/End: Original strand, 4471918 - 4471983
Alignment:
Q  344 tctgatttggtcctaaagtttggtggaccgatcacttttgattcgagatcggcagtcaattctttg 409  Q
    |||| |||||||||  ||| |||||| |||||| | |||||||||||||||| ||||| |||||||    
T  4471918 tctggtttggtcctggagtctggtgggccgatcgcctttgattcgagatcgggagtcagttctttg 4471983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 585 - 674
Target Start/End: Original strand, 4975016 - 4975105
Alignment:
Q  585 tcgtgtaggagtatgttttaggtggtaacgtatattttggtgggtgttatcatcatgggtgttttttatagtatttattttcgggtgttc 674  Q
    ||||| || ||| |||||||||||||   || || |||||||||||||||| ||| || ||||||| |  || |||||||||||||||||    
T  4975016 tcgtgaagaagtctgttttaggtggtggtgtgtaatttggtgggtgttatcctcaaggatgtttttcagggtgtttattttcgggtgttc 4975105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 585 - 674
Target Start/End: Original strand, 4992924 - 4993013
Alignment:
Q  585 tcgtgtaggagtatgttttaggtggtaacgtatattttggtgggtgttatcatcatgggtgttttttatagtatttattttcgggtgttc 674  Q
    ||||| || ||| |||||||||||||   || || |||||||||||||||| ||| || ||||||| |  || |||||||||||||||||    
T  4992924 tcgtgaagaagtctgttttaggtggtggtgtgtaatttggtgggtgttatcctcaaggatgtttttcagggtgtttattttcgggtgttc 4993013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 263 - 312
Target Start/End: Complemental strand, 15126595 - 15126546
Alignment:
Q  263 ggtgggccggttacttttgcttcaagatcgggagtcggtgtctagctgca 312  Q
    |||||| | |||||||||||||| ||||||||||| || |||||||||||    
T  15126595 ggtgggtcagttacttttgcttcgagatcgggagttggcgtctagctgca 15126546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 354 - 415
Target Start/End: Complemental strand, 33788708 - 33788647
Alignment:
Q  354 tcctaaagtttggtggaccgatcacttttgattcgagatcggcagtcaattctttggatcag 415  Q
    |||| |||| |||||| |||||| ||||||||||||||| || ||||| |||||||| ||||    
T  33788708 tcctgaagtctggtgggccgatcgcttttgattcgagattgggagtcagttctttggttcag 33788647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 68; Significance: 5e-30; HSPs: 4)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 75 - 313
Target Start/End: Original strand, 36407 - 36646
Alignment:
Q  75 gcctctggtattcggatccttgttcgtagtcagtaactcttgttgtgg--tttttagggttgttaaggtg-tttagggtgtttgaaggaagtgggtctcg 171  Q
    ||||||| || |||| ||||||||||| ||||||| ||||||||   |  ||||| |||||||||||||| ||||||||||||  |||||| || |||||    
T  36407 gcctctgttactcgggtccttgttcgtcgtcagtagctcttgttcacgtttttttggggttgttaaggtgttttagggtgtttagaggaagcggatctcg 36506  T
Q  172 ttgtgttgagctttttccttttgatcagtttgttgtttgcacgaccgcatat-atatcacgtcgttgtcatac-tttttgtgtgttggttgtcggtgggc 269  Q
    ||| | || |  |||||||||||||  ||||||||||||||| ||||||||| || |||     ||||||| | ||||||||||||||||  ||||||||    
T  36507 ttgagctgtgacttttccttttgatatgtttgttgtttgcaccaccgcatatcatgtca----tttgtcattcttttttgtgtgttggtttccggtgggc 36602  T
Q  270 cggttacttttgcttcaagatcgggagtcggtgtctagctgcaa 313  Q
    || ||| ||||| ||| ||||| |||||||||||||||||||||    
T  36603 cgattaattttgattcgagatcaggagtcggtgtctagctgcaa 36646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050; HSP #2
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 330 - 409
Target Start/End: Original strand, 36688 - 36767
Alignment:
Q  330 gtgaggggtgcctttctgatttggtcctaaagtttggtggaccgatcacttttgattcgagatcggcagtcaattctttg 409  Q
    |||||||||||| |||||||||||||||||||| ||| || | ||||||||||||||||||||||| ||||| |||||||    
T  36688 gtgaggggtgcccttctgatttggtcctaaagtctggcgggctgatcacttttgattcgagatcgggagtcagttctttg 36767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050; HSP #3
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 439 - 528
Target Start/End: Original strand, 36799 - 36888
Alignment:
Q  439 tttctttcggtgaatcagaggtcgagaggtggtggaagttgattgatctttcagataggagcttttcggatgcggctcagctttggtgtt 528  Q
    |||||||||||| ||| |||||||||| |||||||||||||| || |||||| | |||||||||||||  || |||||||||||||||||    
T  36799 tttctttcggtggatcggaggtcgagatgtggtggaagttgaatggtctttcggttaggagcttttcgattgtggctcagctttggtgtt 36888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050; HSP #4
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 585 - 675
Target Start/End: Original strand, 36978 - 37068
Alignment:
Q  585 tcgtgtaggagtatgttttaggtggtaacgtatattttggtgggtgttatcatcatgggtgttttttatagtatttattttcgggtgttcc 675  Q
    ||||| |||||| ||||||||||||| |||| ||||||| |||||||  || ||||||||||||||||| || ||||||||||| ||||||    
T  36978 tcgtgaaggagtctgttttaggtggtgacgtgtattttgttgggtgtggtcctcatgggtgttttttatggtgtttattttcggatgttcc 37068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 68; Significance: 5e-30; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 123 - 313
Target Start/End: Complemental strand, 20702132 - 20701945
Alignment:
Q  123 tttttagggttgttaaggtgtttagggtgtttgaaggaagtgggtctcgttgtgttgagctttttccttttgatcagtttgttgtttgcacgaccgcata 222  Q
    ||||| || |||||||||||||||||||||||| |||||| ||||| ||||| |  |  |||||||| ||||||| ||||||||||||||| ||||| ||    
T  20702132 tttttgggattgttaaggtgtttagggtgtttggaggaagcgggtcccgttgagcggtactttttccgtttgatctgtttgttgtttgcactaccgcgta 20702033  T
Q  223 tatatcacgtcgttgtcatactttttgtgtgttggttgtcggtgggccggttacttttgcttcaagatcgggagtcggtgtctagctgcaa 313  Q
    | | |   ||  ||||| ||||||||||||| |||||  || ||||||||||||||||||||  ||||||||| |||||||||||||||||    
T  20702032 tct-tgttgt--ttgtcctactttttgtgtgatggtttccgatgggccggttacttttgctttgagatcgggattcggtgtctagctgcaa 20701945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 124 - 311
Target Start/End: Complemental strand, 3880912 - 3880727
Alignment:
Q  124 ttttagggttgttaaggtgtttagggtgttt-gaaggaagtgggtctcgttgtgttgagctttttccttttgatcagtttgttgtttgcacgaccgcata 222  Q
    |||| ||| ||||||| |||||||||||||| | | |||| |||||  |||| |||||||||||||||||||||   |||||||||||||| ||| ||||    
T  3880912 ttttggggctgttaagatgtttagggtgttttggaagaagcgggtcctgttgagttgagctttttccttttgatatatttgttgtttgcaccaccacata 3880813  T
Q  223 tatatcacgtcgtt-gtcatactttttgtgtgttggttgtcggtgggccggttacttttgcttcaagatcgggagtcggtgtctagctgc 311  Q
    |    || ||| || |||| ||||||||| || |||||  ||||||||| |||||||||||||  |||||||||||||||||||||||||    
T  3880812 t----catgtcctttgtcagactttttgtttgctggtttccggtgggccagttacttttgctttgagatcgggagtcggtgtctagctgc 3880727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 435 - 528
Target Start/End: Complemental strand, 3880593 - 3880500
Alignment:
Q  435 atggtttctttcggtgaatcagaggtcgagaggtggtggaagttgattgatctttcagataggagcttttcggatgcggctcagctttggtgtt 528  Q
    |||||||||||| ||| ||| ||||||||| ||||||||||||||| | ||||||| |||| |||||||| ||||| |||||||||||||||||    
T  3880593 atggtttctttccgtggatcggaggtcgagtggtggtggaagttgaataatctttcggatatgagctttttggatgtggctcagctttggtgtt 3880500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 435 - 528
Target Start/End: Complemental strand, 20701798 - 20701705
Alignment:
Q  435 atggtttctttcggtgaatcagaggtcgagaggtggtggaagttgattgatctttcagataggagcttttcggatgcggctcagctttggtgtt 528  Q
    |||||||||||||||| ||| ||||||||||||| ||||||| ||| ||||||||| ||||||||||||||| ||| |||||| ||||| ||||    
T  20701798 atggtttctttcggtggatcggaggtcgagaggtagtggaagctgaatgatctttcggataggagcttttcgaatgtggctcaactttgttgtt 20701705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 327 - 390
Target Start/End: Complemental strand, 3880686 - 3880623
Alignment:
Q  327 agggtgaggggtgcctttctgatttggtcctaaagtttggtggaccgatcacttttgattcgag 390  Q
    |||||||| |||||| ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  3880686 agggtgagaggtgcccttctgatttggtcctaaagtttggtgggccgatcacttttgattcgag 3880623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 247 - 313
Target Start/End: Complemental strand, 15132730 - 15132664
Alignment:
Q  247 ttgtgtgttggttgtcggtgggccggttacttttgcttcaagatcgggagtcggtgtctagctgcaa 313  Q
    ||||||| ||||| ||||||||||||||||||||||||| |||||||||||||||| ||||||||||    
T  15132730 ttgtgtgatggttttcggtgggccggttacttttgcttcgagatcgggagtcggtgactagctgcaa 15132664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 328 - 407
Target Start/End: Complemental strand, 32935441 - 32935362
Alignment:
Q  328 gggtgaggggtgcctttctgatttggtcctaaagtttggtggaccgatcacttttgattcgagatcggcagtcaattctt 407  Q
    ||||||||||| || ||||||||||||||| |||| |||||| |||||| |||||||||||||||||| ||||| |||||    
T  32935441 gggtgaggggttcccttctgatttggtcctgaagtctggtgggccgatcgcttttgattcgagatcgggagtcagttctt 32935362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 255 - 313
Target Start/End: Complemental strand, 16510502 - 16510444
Alignment:
Q  255 tggttgtcggtgggccggttacttttgcttcaagatcgggagtcggtgtctagctgcaa 313  Q
    ||||| ||| ||||||||||||||||||||| |||||||||||||| ||||||||||||    
T  16510502 tggttttcgttgggccggttacttttgcttcgagatcgggagtcggggtctagctgcaa 16510444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 343 - 407
Target Start/End: Complemental strand, 26534806 - 26534742
Alignment:
Q  343 ttctgatttggtcctaaagtttggtggaccgatcacttttgattcgagatcggcagtcaattctt 407  Q
    ||||||||||||||| |||| |||||| |||||||||||||||||||||| || ||||| |||||    
T  26534806 ttctgatttggtcctgaagtctggtgggccgatcacttttgattcgagattgggagtcagttctt 26534742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 328 - 410
Target Start/End: Complemental strand, 20701905 - 20701823
Alignment:
Q  328 gggtgaggggtgcctttctgatttggtcctaaagtttggtggaccgatcacttttgattcgagatcggcagtcaattctttgg 410  Q
    |||||||||||||| ||||||||||||| |  ||  |||||  ||||||||||||||||||||||||| ||| | ||||||||    
T  20701905 gggtgaggggtgcccttctgatttggtcatttagactggtgtgccgatcacttttgattcgagatcgggagttagttctttgg 20701823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 335 - 401
Target Start/End: Original strand, 34105399 - 34105465
Alignment:
Q  335 gggtgcctttctgatttggtcctaaagtttggtggaccgatcacttttgattcgagatcggcagtca 401  Q
    |||||||||  ||||||| | ||| |||||||||| ||||||||||||||||||||||||| |||||    
T  34105399 gggtgccttagtgatttgtttctagagtttggtgggccgatcacttttgattcgagatcgggagtca 34105465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 350 - 415
Target Start/End: Original strand, 9224042 - 9224107
Alignment:
Q  350 ttggtcctaaagtttggtggaccgatcacttttgattcgagatcggcagtcaattctttggatcag 415  Q
    ||||||||||||| |||||| | |||| |||||||||||||||||| ||||| |||||||| ||||    
T  9224042 ttggtcctaaagtctggtgggctgatcgcttttgattcgagatcgggagtcagttctttggttcag 9224107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 336 - 407
Target Start/End: Complemental strand, 26216112 - 26216042
Alignment:
Q  336 ggtgcctttctgatttggtcctaaagtttggtggaccgatcacttttgattcgagatcggcagtcaattctt 407  Q
    |||||| |||||||||| | |||| || |||||| ||||||||||||||||||||||||| ||||| |||||    
T  26216112 ggtgcccttctgatttgattctaa-gtctggtgggccgatcacttttgattcgagatcgggagtcagttctt 26216042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 235 - 305
Target Start/End: Original strand, 9223903 - 9223972
Alignment:
Q  235 ttgtcatactttttgtgtgttggttgtcggtgggccggttacttttgcttcaagatcgggagtcggtgtct 305  Q
    ||||| ||||||||||||| ||| ||  ||||||||||||| ||||||||| ||||||||||| |||||||    
T  9223903 ttgtcttactttttgtgtgatggatgctggtgggccggtta-ttttgcttcgagatcgggagttggtgtct 9223972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 435 - 489
Target Start/End: Complemental strand, 15120592 - 15120538
Alignment:
Q  435 atggtttctttcggtgaatcagaggtcgagaggtggtggaagttgattgatcttt 489  Q
    ||||||||||| |||| ||| ||||||||||||||||||||| || |||||||||    
T  15120592 atggtttcttttggtggatcggaggtcgagaggtggtggaagctggttgatcttt 15120538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 346 - 395
Target Start/End: Original strand, 21266110 - 21266159
Alignment:
Q  346 tgatttggtcctaaagtttggtggaccgatcacttttgattcgagatcgg 395  Q
    ||||||||||||||||  |||||| |||||| ||||||||||||||||||    
T  21266110 tgatttggtcctaaagactggtgggccgatcgcttttgattcgagatcgg 21266159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 364 - 395
Target Start/End: Complemental strand, 7546495 - 7546464
Alignment:
Q  364 tggtggaccgatcacttttgattcgagatcgg 395  Q
    ||||||||||||||||||||||||||||||||    
T  7546495 tggtggaccgatcacttttgattcgagatcgg 7546464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 265 - 312
Target Start/End: Complemental strand, 13098753 - 13098706
Alignment:
Q  265 tgggccggttacttttgcttcaagatcgggagtcggtgtctagctgca 312  Q
    ||||||||||||||||||||| |||| |||||| || |||||||||||    
T  13098753 tgggccggttacttttgcttcgagattgggagttggcgtctagctgca 13098706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 263 - 306
Target Start/End: Original strand, 15943908 - 15943951
Alignment:
Q  263 ggtgggccggttacttttgcttcaagatcgggagtcggtgtcta 306  Q
    ||||||||||||| ||||||||||||||||||||| || |||||    
T  15943908 ggtgggccggttaattttgcttcaagatcgggagttggagtcta 15943951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 333 - 392
Target Start/End: Complemental strand, 16510398 - 16510339
Alignment:
Q  333 aggggtgcctttctgatttggtcctaaagtttggtggaccgatcacttttgattcgagat 392  Q
    ||||||||| | || ||||||| ||||||| | |||| ||||||||||||||||||||||    
T  16510398 aggggtgccctgctaatttggttctaaagtctagtgggccgatcacttttgattcgagat 16510339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 247 - 313
Target Start/End: Original strand, 3117364 - 3117430
Alignment:
Q  247 ttgtgtgttggttgtcggtgggccggttacttttgcttcaagatcgggagtcggtgtctagctgcaa 313  Q
    ||||||||||||| || |||||||||||  ||| ||||| |||| ||||||||| |||||| |||||    
T  3117364 ttgtgtgttggttttcagtgggccggttcatttggcttcgagattgggagtcggggtctagttgcaa 3117430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 585 - 647
Target Start/End: Complemental strand, 17278311 - 17278249
Alignment:
Q  585 tcgtgtaggagtatgttttaggtggtaacgtatattttggtgggtgttatcatcatgggtgtt 647  Q
    ||||| |||||| || |||||||||||| || |||||||||||||||| ||  ||||||||||    
T  17278311 tcgtgaaggagtctgatttaggtggtaatgtttattttggtgggtgttgtccgcatgggtgtt 17278249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 364 - 409
Target Start/End: Original strand, 3117508 - 3117553
Alignment:
Q  364 tggtggaccgatcacttttgattcgagatcggcagtcaattctttg 409  Q
    |||||| ||||||||||||||||| ||||||| ||||| |||||||    
T  3117508 tggtgggccgatcacttttgattcaagatcgggagtcagttctttg 3117553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 365 - 394
Target Start/End: Original strand, 13423482 - 13423511
Alignment:
Q  365 ggtggaccgatcacttttgattcgagatcg 394  Q
    ||||||||||||||||||||||||||||||    
T  13423482 ggtggaccgatcacttttgattcgagatcg 13423511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 68; Significance: 5e-30; HSPs: 47)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 327 - 410
Target Start/End: Complemental strand, 7392134 - 7392051
Alignment:
Q  327 agggtgaggggtgcctttctgatttggtcctaaagtttggtggaccgatcacttttgattcgagatcggcagtcaattctttgg 410  Q
    ||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| ||||||||    
T  7392134 agggtgaggggtgcccttctgatttggtcctaaagtctggtggaccgatcacttttgattcgagatcgggagtcagttctttgg 7392051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 123 - 315
Target Start/End: Complemental strand, 14302759 - 14302570
Alignment:
Q  123 tttttagggttgttaaggtgtttagggtgtttgaaggaagtgggtctcgttgtgttgagctttttccttttgatcagtttgttgtttgcacgaccgcata 222  Q
    ||||| |||||||| ||||||||| | |||||| |||||| ||||| ||||| ||||||| ||||| ||||||||  |||||||||||||| ||  ||||    
T  14302759 tttttggggttgtttaggtgtttaagatgtttggaggaagcgggtcccgttgagttgagcattttcgttttgatctatttgttgtttgcaccacatcata 14302660  T
Q  223 tatatcacgtcgttgtcatactttttgtgtgttggttgtcggtgggccggttacttttgcttcaagatcgggagtcggtgtctagctgcaagc 315  Q
    | |||  |||  ||||||| ||||||||||| |||||   || || || |||||||||||||| |||||||||||| ||||||||||||||||    
T  14302659 t-tatgtcgt--ttgtcattctttttgtgtgctggtttctgggggccccgttacttttgcttcgagatcgggagtccgtgtctagctgcaagc 14302570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 129 - 313
Target Start/End: Complemental strand, 7195563 - 7195380
Alignment:
Q  129 gggttgttaaggtgtttagggtgtttgaaggaagtgggtctcgttgtgttgagctttttccttttgatcagtttgttgtttgcacgaccgcatat-atat 227  Q
    ||||| ||||||||||||||||||||| |||||| | |||   ||||| || || |||||||||| ||  ||||||||||||||| |||||  || ||||    
T  7195563 gggttattaaggtgtttagggtgtttggaggaagcgtgtccttttgtgctgggccttttcctttttatatgtttgttgtttgcaccaccgctcatcatat 7195464  T
Q  228 cacgtcgttgtcatactttttgtgtgttggttgtcg-gtgggccggttacttttgcttcaagatcgggagtcggtgtctagctgcaa 313  Q
    ||  |   |||||||||||||||||||||||| ||  ||||||| |||||||||||||| |||||||||||||||| ||||||||||    
T  7195463 cattt---tgtcatactttttgtgtgttggttttccagtgggccagttacttttgcttcgagatcgggagtcggtggctagctgcaa 7195380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 435 - 528
Target Start/End: Original strand, 8297554 - 8297647
Alignment:
Q  435 atggtttctttcggtgaatcagaggtcgagaggtggtggaagttgattgatctttcagataggagcttttcggatgcggctcagctttggtgtt 528  Q
    |||||||||||||||||||| ||||||| ||||||||||||||||| || |||||| ||||||||||||||||||| ||||| | |||||||||    
T  8297554 atggtttctttcggtgaatcggaggtcgtgaggtggtggaagttgaatggtctttcggataggagcttttcggatgtggctcggttttggtgtt 8297647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 579 - 675
Target Start/End: Original strand, 30097598 - 30097694
Alignment:
Q  579 ttgttctcgtgtaggagtatgttttaggtggtaacgtatattttggtgggtgttatcatcatgggtgttttttatagtatttattttcgggtgttcc 675  Q
    ||||| ||||| |||||| ||||||||||||| |||| |||||||||||||||| ||||||||| |||||||||  || ||||||||||||||||||    
T  30097598 ttgttttcgtgaaggagtctgttttaggtggtgacgtgtattttggtgggtgttgtcatcatggatgttttttagggtgtttattttcgggtgttcc 30097694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 75 - 313
Target Start/End: Complemental strand, 26046341 - 26046106
Alignment:
Q  75 gcctctggtattcggatccttgttcgtagtcagtaactcttgttgtggtttttagggttgttaaggtgtttagggtgtttgaaggaagtgggtctcgttg 174  Q
    ||||||| || |||| |||||||||||  ||| || ||||||||   |||||| ||||  || |||||||||||||||||  |||||| |||||  ||||    
T  26046341 gcctctgttactcgggtccttgttcgtcttcactagctcttgtttgtgtttttggggtgttttaggtgtttagggtgtttagaggaagcgggtcatgttg 26046242  T
Q  175 tgttgagctttttccttttgatcagtttgttgtttgcacgaccgcatatatatcacgtcgtt-gtcatactttttgtgtgttggttgtcggtgggccggt 273  Q
       ||||| || | ||||||||  ||||||||||||||| |||||||||    || |||||| ||||||||||||||||| | |||   ||||||| | |    
T  26046241 cactgagccttcttcttttgatatgtttgttgtttgcaccaccgcatat----catgtcgtttgtcatactttttgtgtgctagtttctggtgggcagat 26046146  T
Q  274 tacttttgcttcaagatcgggagtcggtgtctagctgcaa 313  Q
    || ||||||||| ||| |||||||||||| ||||||||||    
T  26046145 taattttgcttcgagaccgggagtcggtggctagctgcaa 26046106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 327 - 525
Target Start/End: Complemental strand, 7195342 - 7195145
Alignment:
Q  327 agggtgaggggtgcctttctgatttggtcctaaagtttggtggaccgatcacttttgattcgagatcggcagtcaattctttggatcagnnnnnnnnnnn 426  Q
    ||||||||||||||| ||||||||||| | |||||| |||||  ||||||||||||||||||||||||| ||||| |||||||| |||                
T  7195342 agggtgaggggtgcccttctgatttggccataaagtctggtgagccgatcacttttgattcgagatcgggagtcagttctttggctca-agttagagttt 7195244  T
Q  427 nnnnnnnnatggtttctttcggtgaatcagaggtcgagaggtggtggaagttgattgatctttcagataggagcttttcggatgcggctcagctttggt 525  Q
            ||||||| |||||||| ||| ||||||||||||| ||||||| ||| | ||||||  |||||||||||| |||||| ||||||||||||||    
T  7195243 gggcttttatggtttttttcggtggatcggaggtcgagaggtcgtggaagctgaataatcttttggataggagctttgcggatgtggctcagctttggt 7195145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 329 - 410
Target Start/End: Complemental strand, 13954334 - 13954254
Alignment:
Q  329 ggtgaggggtgcctttctgatttggtcctaaagtttggtggaccgatcacttttgattcgagatcggcagtcaattctttgg 410  Q
    ||||||||||||||| |||||||||||||||||| |||||| ||||||||||||||||||||||||| ||||| | ||||||    
T  13954334 ggtgaggggtgcctt-ctgatttggtcctaaagtctggtgggccgatcacttttgattcgagatcgggagtcattactttgg 13954254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 94 - 313
Target Start/End: Complemental strand, 13954590 - 13954375
Alignment:
Q  94 ttgttcgtagtcagtaactcttgttgtggtttttagggttgttaaggtgtttagggtgtttgaaggaagtgggtctcgttgtgttgagctttttcctttt 193  Q
    |||||||| |||| || ||||||||   |||| | | ||||||||||||||||||||||||| ||| ||| || | ||| |   |  || ||| ||||||    
T  13954590 ttgttcgtcgtcactagctcttgtttgcgtttctggagttgttaaggtgtttagggtgtttggagggagttggcc-cgtggaactatgcctttacctttt 13954492  T
Q  194 gatcagtttgttgtttgcacgaccgcatatatatcacgtcgtt-gtcatactttttgtgtgttggttgtcggtgggccggttacttttgcttcaagatcg 292  Q
    | || |||||||||||||||  |||| |||    || |||||| |||||| ||||||| || ||||| ||||||||||||||||||||||||| |||||     
T  13954491 ggtcggtttgttgtttgcaccgccgcttat----catgtcgtttgtcataatttttgtatgctggttttcggtgggccggttacttttgcttcgagatca 13954396  T
Q  293 ggagtcggtgtctagctgcaa 313  Q
     ||||||||||||||||||||    
T  13954395 agagtcggtgtctagctgcaa 13954375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 435 - 530
Target Start/End: Complemental strand, 7392032 - 7391936
Alignment:
Q  435 atggtttctttcggtgaatcagaggtcgagaggtggtggaagttgattgatctt-tcagataggagcttttcggatgcggctcagctttggtgttgg 530  Q
    |||||||||||||||| ||| |||||||||||||||| ||||  |||||||||| |  ||||||||||||||||||| ||||| ||||| |||||||    
T  7392032 atggtttctttcggtggatcggaggtcgagaggtggttgaagcggattgatcttattggataggagcttttcggatgtggctctgctttcgtgttgg 7391936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 327 - 411
Target Start/End: Complemental strand, 14302533 - 14302449
Alignment:
Q  327 agggtgaggggtgcctttctgatttggtcctaaagtttggtggaccgatcacttttgattcgagatcggcagtcaattctttgga 411  Q
    |||||||||| |||| ||||| |||||||||||||| |||||||| ||||||||||| |||||||| || ||||| |||||||||    
T  14302533 agggtgagggatgcccttctgttttggtcctaaagtctggtggactgatcacttttggttcgagattgggagtcagttctttgga 14302449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 333 - 395
Target Start/End: Complemental strand, 26046062 - 26045999
Alignment:
Q  333 aggggtgcctttctga-tttggtcctaaagtttggtggaccgatcacttttgattcgagatcgg 395  Q
    |||||||||||| ||| |||||||||||||| ||||| ||||||||||||||||||||||||||    
T  26046062 aggggtgcctttttgagtttggtcctaaagtctggtgaaccgatcacttttgattcgagatcgg 26045999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 235 - 313
Target Start/End: Complemental strand, 7392251 - 7392173
Alignment:
Q  235 ttgtcatactttttgtgtgttggttgtcggtgggccggttacttttgcttcaagatcgggagtcggtgtctagctgcaa 313  Q
    ||||| ||||||||||||||||||    | ||| ||||||||||||||||| ||||||||||| |||||||||||||||    
T  7392251 ttgtcttactttttgtgtgttggtatctgatggaccggttacttttgcttcgagatcgggagttggtgtctagctgcaa 7392173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 235 - 313
Target Start/End: Original strand, 8297329 - 8297407
Alignment:
Q  235 ttgtcatactttttgtgtgttggttgtcggtgggccggttacttttgcttcaagatcgggagtcggtgtctagctgcaa 313  Q
    |||||||||||||| || | ||||| || |||||||| ||||||||||||| |||||| |||| |||||||||||||||    
T  8297329 ttgtcatactttttctgcgctggttttcagtgggccgattacttttgcttcgagatcgagagttggtgtctagctgcaa 8297407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 332 - 409
Target Start/End: Original strand, 698344 - 698421
Alignment:
Q  332 gaggggtgcctttctgatttggtcctaaagtttggtggaccgatcacttttgattcgagatcggcagtcaattctttg 409  Q
    |||||||||| | || ||||||| ||| ||| ||||||||||||| |||||||||||||||||| |||||| ||||||    
T  698344 gaggggtgccctgctaatttggtgctatagtctggtggaccgatctcttttgattcgagatcgggagtcaactctttg 698421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 435 - 528
Target Start/End: Complemental strand, 33258877 - 33258784
Alignment:
Q  435 atggtttctttcggtgaatcagaggtcgagaggtggtggaagttgattgatctttcagataggagcttttcggatgcggctcagctttggtgtt 528  Q
    |||||||||||||||| ||| ||||||||||| | ||||||| ||| |||| | ||||  |||||||| | ||||| |||||||||||||||||    
T  33258877 atggtttctttcggtggatcggaggtcgagagatagtggaagctgaatgatttctcagggaggagcttgttggatgtggctcagctttggtgtt 33258784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 329 - 410
Target Start/End: Complemental strand, 33258983 - 33258902
Alignment:
Q  329 ggtgaggggtgcctttctgatttggtcctaaagtttggtggaccgatcacttttgattcgagatcggcagtcaattctttgg 410  Q
    ||||||||||| | ||||| |||||| ||||||| |||||| ||||||||||||||||||||||| | ||| | ||||||||    
T  33258983 ggtgaggggtgtccttctgttttggtgctaaagtctggtgggccgatcacttttgattcgagatcaggagttagttctttgg 33258902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 348 - 409
Target Start/End: Original strand, 34378097 - 34378158
Alignment:
Q  348 atttggtcctaaagtttggtggaccgatcacttttgattcgagatcggcagtcaattctttg 409  Q
    ||||||| ||||||| |||||| ||||||||||||||||||||||||| ||||| |||||||    
T  34378097 atttggtactaaagtctggtgggccgatcacttttgattcgagatcgggagtcagttctttg 34378158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 334 - 410
Target Start/End: Complemental strand, 24072362 - 24072286
Alignment:
Q  334 ggggtgcctttctgatttggtcctaaagtttggtggaccgatcacttttgattcgagatcggcagtcaattctttgg 410  Q
    |||||||| |||||||||||||||||||| |||| | | |||| ||||||||| |||||||| ||||| ||||||||    
T  24072362 ggggtgcccttctgatttggtcctaaagtctggttggctgatcgcttttgatttgagatcggaagtcagttctttgg 24072286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 327 - 410
Target Start/End: Original strand, 8297446 - 8297529
Alignment:
Q  327 agggtgaggggtgcctttctgatttggtcctaaagtttggtggaccgatcacttttgattcgagatcggcagtcaattctttgg 410  Q
    ||||||||||||||| |||||||||||| ||||||  |||||| |  || | ||||||||||||||||| ||||| ||||||||    
T  8297446 agggtgaggggtgcccttctgatttggttctaaagcatggtgggctaataatttttgattcgagatcgggagtcagttctttgg 8297529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 435 - 505
Target Start/End: Complemental strand, 21402832 - 21402761
Alignment:
Q  435 atggtttctttcggtgaatcagaggtcgagaggtggtggaagttgattgatc-tttcagataggagcttttc 505  Q
    |||||||||||||||| ||  ||||| ||||||||||||||||||||||||| |||| | ||||||||||||    
T  21402832 atggtttctttcggtggattggaggttgagaggtggtggaagttgattgatcttttcgggtaggagcttttc 21402761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 241 - 312
Target Start/End: Complemental strand, 22675527 - 22675456
Alignment:
Q  241 tactttttgtgtgttggttgtcggtgggccggttacttttgcttcaagatcgggagtcggtgtctagctgca 312  Q
    ||||||||||||||||| |   ||||||||||||||||||||||| ||| ||||||| || |||||||||||    
T  22675527 tactttttgtgtgttggattctggtgggccggttacttttgcttcgagaccgggagttggcgtctagctgca 22675456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 335 - 410
Target Start/End: Complemental strand, 39024545 - 39024470
Alignment:
Q  335 gggtgcctttctgatttggtcctaaagtttggtggaccgatcacttttgattcgagatcggcagtcaattctttgg 410  Q
    ||||||| |||||| |||||||| |||||||||||  | ||| |||||||||||||||||| ||||| ||||||||    
T  39024545 gggtgcccttctgagttggtcctgaagtttggtggctcaatcgcttttgattcgagatcgggagtcacttctttgg 39024470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 328 - 410
Target Start/End: Complemental strand, 17854169 - 17854087
Alignment:
Q  328 gggtgaggggtgcctttctgatttggtcctaaagtttggtggaccgatcacttttgattcgagatcggcagtcaattctttgg 410  Q
    |||||||||||||| |||| |||||||| | |||| |||||| |||| | ||||||| |||||||||| |||||||| |||||    
T  17854169 gggtgaggggtgcccttctaatttggtcttgaagtatggtgggccgaccgcttttgactcgagatcgggagtcaattatttgg 17854087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 435 - 528
Target Start/End: Complemental strand, 26045959 - 26045866
Alignment:
Q  435 atggtttctttcggtgaatcagaggtcgagaggtggtggaagttgattgatctttcagataggagcttttcggatgcggctcagctttggtgtt 528  Q
    ||||||||| |||| | ||| |||||||  |||  ||||||| |||||||||||||||||| |||||||||||| | | |||| ||||||||||    
T  26045959 atggtttctctcgggggatcggaggtcgttaggctgtggaagctgattgatctttcagatatgagcttttcggaggtgactcaactttggtgtt 26045866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 598 - 650
Target Start/End: Complemental strand, 14302240 - 14302188
Alignment:
Q  598 tgttttaggtggtaacgtatattttggtgggtgttatcatcatgggtgttttt 650  Q
    ||||||||||||| |||| |||||||||||||||| |||||| ||||||||||    
T  14302240 tgttttaggtggtgacgtgtattttggtgggtgttgtcatcaggggtgttttt 14302188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 435 - 495
Target Start/End: Complemental strand, 14302425 - 14302365
Alignment:
Q  435 atggtttctttcggtgaatcagaggtcgagaggtggtggaagttgattgatctttcagata 495  Q
    |||||||||||||||| ||| ||||||||||||||||||||| ||  ||||||||| ||||    
T  14302425 atggtttctttcggtggatcggaggtcgagaggtggtggaagctgcatgatctttcggata 14302365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 460 - 528
Target Start/End: Complemental strand, 26405515 - 26405447
Alignment:
Q  460 tcgagaggtggtggaagttgattgatctttcagataggagcttttcggatgcggctcagctttggtgtt 528  Q
    ||||||||||||||||| |||||| |||||| |||| |||||||||||| | |||||  ||||||||||    
T  26405515 tcgagaggtggtggaagctgattggtctttcggatatgagcttttcggaggtggctcgactttggtgtt 26405447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 334 - 410
Target Start/End: Complemental strand, 39184283 - 39184207
Alignment:
Q  334 ggggtgcctttctgatttggtcctaaagtttggtggaccgatcacttttgattcgagatcggcagtcaattctttgg 410  Q
    |||||||| |||||||||| || |   || |||||| ||||||||||||||||||||||||| ||||| ||||||||    
T  39184283 ggggtgcccttctgatttgatcatgtggtctggtgggccgatcacttttgattcgagatcggaagtcagttctttgg 39184207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 344 - 407
Target Start/End: Original strand, 23426339 - 23426402
Alignment:
Q  344 tctgatttggtcctaaagtttggtggaccgatcacttttgattcgagatcggcagtcaattctt 407  Q
    |||| ||||||||| |||| ||||||||||| ||||||||||||||||| || ||||| |||||    
T  23426339 tctggtttggtcctgaagtctggtggaccgaacacttttgattcgagattgggagtcagttctt 23426402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 333 - 415
Target Start/End: Original strand, 8730901 - 8730983
Alignment:
Q  333 aggggtgcctttctgatttggtcctaaagtttggtggaccgatcacttttgattcgagatcggcagtcaattctttggatcag 415  Q
    ||||||||| || |||||||||| |  ||| ||||||||| ||| ||||| |||||||||||| ||||| |||||||| ||||    
T  8730901 aggggtgcccttatgatttggtcttgcagtctggtggacctatcgcttttaattcgagatcgggagtcagttctttggttcag 8730983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 356 - 410
Target Start/End: Complemental strand, 22675398 - 22675344
Alignment:
Q  356 ctaaagtttggtggaccgatcacttttgattcgagatcggcagtcaattctttgg 410  Q
    ||||||| |||||||||||||  ||||||||||||||||| ||||| ||||||||    
T  22675398 ctaaagtctggtggaccgatcgattttgattcgagatcgggagtcagttctttgg 22675344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 264 - 310
Target Start/End: Complemental strand, 24072457 - 24072411
Alignment:
Q  264 gtgggccggttacttttgcttcaagatcgggagtcggtgtctagctg 310  Q
    |||||||||||||||||||||||||||||||||| || || ||||||    
T  24072457 gtgggccggttacttttgcttcaagatcgggagttggcgtttagctg 24072411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 598 - 712
Target Start/End: Complemental strand, 26405344 - 26405226
Alignment:
Q  598 tgttttaggtggtaacgtatattttggtgggtgttatcatcatgggtgttttttatagtatttattttcgggtgttcc-actttata----gccttttgt 692  Q
    ||||||||||||| |||| ||||||||||| |||| || ||| ||||| ||||||  || |||||||||||||||||| ||| ||||    |||||||||    
T  26405344 tgttttaggtggtgacgtgtattttggtggttgttgtcctcaggggtg-tttttaaggtgtttattttcgggtgttccgactatatacgacgccttttgt 26405246  T
Q  693 ttatattcctagtttcaccg 712  Q
    || |||||  ||||||||||    
T  26405245 ttgtattctcagtttcaccg 26405226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 349 - 414
Target Start/End: Original strand, 29087481 - 29087546
Alignment:
Q  349 tttggtcctaaagtttggtggaccgatcacttttgattcgagatcggcagtcaattctttggatca 414  Q
    |||||| ||||||| |||||||| |||| |||||||||||||||| | ||||| ||||||| ||||    
T  29087481 tttggttctaaagtctggtggactgatcccttttgattcgagatcaggagtcagttctttgaatca 29087546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 359 - 395
Target Start/End: Original strand, 12046265 - 12046301
Alignment:
Q  359 aagtttggtggaccgatcacttttgattcgagatcgg 395  Q
    ||||||||||| |||||||||||||||||||||||||    
T  12046265 aagtttggtgggccgatcacttttgattcgagatcgg 12046301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 261 - 313
Target Start/End: Original strand, 29087367 - 29087419
Alignment:
Q  261 tcggtgggccggttacttttgcttcaagatcgggagtcggtgtctagctgcaa 313  Q
    ||||||||||||||  ||| ||||| |||||||||||||| ||||||||||||    
T  29087367 tcggtgggccggttcatttggcttcgagatcgggagtcggagtctagctgcaa 29087419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 591 - 650
Target Start/End: Original strand, 8297749 - 8297808
Alignment:
Q  591 aggagtatgttttaggtggtaacgtatattttggtgggtgttatcatcatgggtgttttt 650  Q
    |||||| ||||||||||||| | || ||||||||||| ||||||| ||| ||||||||||    
T  8297749 aggagtgtgttttaggtggtgatgtgtattttggtggatgttatcctcaggggtgttttt 8297808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 578 - 632
Target Start/End: Complemental strand, 7195117 - 7195063
Alignment:
Q  578 gttgttctcgtgtaggagtatgttttaggtggtaacgtatattttggtgggtgtt 632  Q
    |||||| | ||| |||||| ||||||||||||| |||| ||||||||||||||||    
T  7195117 gttgtttttgtgaaggagtctgttttaggtggtgacgtgtattttggtgggtgtt 7195063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 440 - 526
Target Start/End: Complemental strand, 17854056 - 17853971
Alignment:
Q  440 ttctttcggtgaatcagaggtcgagaggtggtggaagttgattgatctttcagataggagcttttcggatgcggctcagctttggtg 526  Q
    ||||||||||| | | || || ||||||||||||||||||| ||||||||   ||| || ||||||||||| ||||||||| |||||    
T  17854056 ttctttcggtggacctgaagttgagaggtggtggaagttgaatgatctttagaatatga-cttttcggatgtggctcagctatggtg 17853971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 247 - 313
Target Start/End: Original strand, 18593115 - 18593181
Alignment:
Q  247 ttgtgtgttggttgtcggtgggccggttacttttgcttcaagatcgggagtcggtgtctagctgcaa 313  Q
    ||||||| || || ||||||||||||||  ||| ||||| |||||||||||||| |||||| |||||    
T  18593115 ttgtgtgctgattttcggtgggccggttcatttggcttcgagatcgggagtcggggtctagttgcaa 18593181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 328 - 406
Target Start/End: Original strand, 31721656 - 31721734
Alignment:
Q  328 gggtgaggggtgcctttctgatttggtcctaaagtttggtggaccgatcacttttgattcgagatcggcagtcaattct 406  Q
    |||| ||||||||| ||||||| |||| || |||| |  ||| |||||| |||||||||||||||||| ||||| ||||    
T  31721656 gggtaaggggtgcccttctgatgtggttctgaagtctaatgggccgatcgcttttgattcgagatcgggagtcagttct 31721734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 348 - 409
Target Start/End: Original strand, 18593242 - 18593303
Alignment:
Q  348 atttggtcctaaagtttggtggaccgatcacttttgattcgagatcggcagtcaattctttg 409  Q
    ||||||| ||| ||||| |||| | ||||||||||||||||||||||| ||| | |||||||    
T  18593242 atttggtgctatagtttagtgggcagatcacttttgattcgagatcgggagttagttctttg 18593303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 331 - 408
Target Start/End: Original strand, 25991989 - 25992066
Alignment:
Q  331 tgaggggtgcctttctgatttggtcctaaagtttggtggaccgatcacttttgattcgagatcggcagtcaattcttt 408  Q
    ||||| ||||| ||||  |||||| ||||||| |||||| || ||| |||||||||||||||||  ||||| ||||||    
T  25991989 tgaggagtgcccttctattttggtgctaaagtctggtgggccaatcgcttttgattcgagatcgagagtcagttcttt 25992066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 598 - 675
Target Start/End: Complemental strand, 26045760 - 26045683
Alignment:
Q  598 tgttttaggtggtaacgtatattttggtgggtgttatcatcatgggtgttttttatagtatttattttcgggtgttcc 675  Q
    ||||||||||||| ||||  ||||||||||||||| || ||| ||| ||||||||  || |||||||| || ||||||    
T  26045760 tgttttaggtggtgacgtgaattttggtgggtgttgtcctcaggggcgttttttagggtgtttatttttggatgttcc 26045683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 585 - 673
Target Start/End: Complemental strand, 33110007 - 33109922
Alignment:
Q  585 tcgtgtaggagtatgttttaggtggtaacgtatattttggtgggtgttatcatcatgggtgttttttatagtatttattttcgggtgtt 673  Q
    ||||| ||| || ||||||||||| | |||| |||||||||||||||| ||||   ||||| |||||| ||| ||||||||||||||||    
T  33110007 tcgtgaaggggtttgttttaggtgatgacgtgtattttggtgggtgttgtcat--agggtg-tttttaaagtgtttattttcgggtgtt 33109922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 617 - 650
Target Start/End: Original strand, 37108103 - 37108136
Alignment:
Q  617 tattttggtgggtgttatcatcatgggtgttttt 650  Q
    ||||||||||||||||||| ||||||||||||||    
T  37108103 tattttggtgggtgttatcctcatgggtgttttt 37108136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0200 (Bit Score: 65; Significance: 3e-28; HSPs: 2)
Name: scaffold0200
Description:

Target: scaffold0200; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 329 - 529
Target Start/End: Original strand, 19363 - 19564
Alignment:
Q  329 ggtgaggggtgcctttctgatttggtcctaaagtttggtggaccgatcacttttgattcgagatcggcagtcaattctttggatcagnnnnnnnnnnnnn 428  Q
    ||||||||||||| |||||||||||||||||||| |||||| ||||||||||||||||||||||||| ||||| |||||||| |||                  
T  19363 ggtgaggggtgcccttctgatttggtcctaaagtctggtgggccgatcacttttgattcgagatcggaagtcagttctttggctcaagtttggttttggg 19462  T
Q  429 nnnnnnatggtttctttcggtgaatcagaggtcgagaggtggtggaagttgattgatc-tttcagataggagcttttcggatgcggctcagctttggtgt 527  Q
          |||||||||||||||| ||| ||||||||||| ||||||||| ||| | ||| |||| || |||||||||||| ||| ||||| ||||||||||    
T  19463 ctttttatggtttctttcggtggatcggaggtcgagagttggtggaagctgaataatcttttcggacaggagcttttcgaatgtggctctgctttggtgt 19562  T
Q  528 tg 529  Q
    ||    
T  19563 tg 19564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0200; HSP #2
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 178 - 312
Target Start/End: Original strand, 19189 - 19320
Alignment:
Q  178 tgagctttttccttttgatcagtttgttgtttgcacgaccgcatatatatcacgtcgtt-gtcatactttttgtgtgttggttgtcggtgggccggttac 276  Q
    ||||| ||||||||| |||  ||||||||||||||| |||    || ||||| |||||| ||| |||| ||||| || |||||  || |||| ||||||     
T  19189 tgagccttttcctttagatatgtttgttgtttgcaccacc----atctatcatgtcgtttgtcttactgtttgtatgctggttcccgatgggtcggttaa 19284  T
Q  277 ttttgcttcaagatcgggagtcggtgtctagctgca 312  Q
    ||||||||| ||||||||||||||||||||||||||    
T  19285 ttttgcttcgagatcgggagtcggtgtctagctgca 19320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 64; Significance: 1e-27; HSPs: 3)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 336 - 528
Target Start/End: Original strand, 58114 - 58306
Alignment:
Q  336 ggtgcctttctgatttggtcctaaagtttggtggaccgatcacttttgattcgagatcggcagtcaattctttggatcagnnnnnnnnnnnnnnnnnnna 435  Q
    |||||| ||| ||||||||||||||||||||||| ||||||||||||||||| ||||||| |||||||| |||||||||                    |    
T  58114 ggtgcccttcagatttggtcctaaagtttggtgggccgatcacttttgattcaagatcggaagtcaattgtttggatcaagtttggttttaggcttttta 58213  T
Q  436 tggtttctttcggtgaatcagaggtcgagaggtggtggaagttgattgatctttcagataggagcttttcggatgcggctcagctttggtgtt 528  Q
    ||||||||||||||| ||| ||||||||||| || |||||| ||| | ||||||| |||| |||||||||| ||| |||||||||||||||||    
T  58214 tggtttctttcggtggatcggaggtcgagagatgatggaagctgaattatctttcggataagagcttttcgaatgtggctcagctttggtgtt 58306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 236 - 313
Target Start/End: Original strand, 57989 - 58066
Alignment:
Q  236 tgtcatactttttgtgtgttggttgtcggtgggccggttacttttgcttcaagatcgggagtcggtgtctagctgcaa 313  Q
    |||||||||||||||||| || ||  |  | ||||||||||||||||||| ||||||||||||| |||||||||||||    
T  57989 tgtcatactttttgtgtgctgatttccattaggccggttacttttgcttcgagatcgggagtcgttgtctagctgcaa 58066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063; HSP #3
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 91 - 155
Target Start/End: Original strand, 57913 - 57977
Alignment:
Q  91 tccttgttcgtagtcagtaactcttgttgtggtttttagggttgttaaggtgtttagggtgtttg 155  Q
    ||||||||||| |||| || ||| ||||   |||||| |||||||||||||||||||||||||||    
T  57913 tccttgttcgtcgtcactagctcatgtttgcgttttttgggttgttaaggtgtttagggtgtttg 57977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 61; Significance: 8e-26; HSPs: 2)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 329 - 529
Target Start/End: Complemental strand, 42239 - 42038
Alignment:
Q  329 ggtgaggggtgcctttctgatttggtcctaaagtttggtggaccgatcacttttgattcgagatcggcagtcaattctttggatcagnnnnnnnnnnnnn 428  Q
    ||||||||||||| ||||||||| |||||||||| |||||| ||||||||||||||||||||||||| ||||| |||||||| |||                  
T  42239 ggtgaggggtgcccttctgatttagtcctaaagtctggtgggccgatcacttttgattcgagatcggaagtcagttctttggctcaagtttggttttggg 42140  T
Q  429 nnnnnnatggtttctttcggtgaatcagaggtcgagaggtggtggaagttgattgatc-tttcagataggagcttttcggatgcggctcagctttggtgt 527  Q
          |||||||||||| ||| ||| ||||||||||| ||||||||| ||| | ||| |||| ||||||||||||||| ||| ||||| ||||||||||    
T  42139 atttttatggtttctttcagtggatcggaggtcgagagttggtggaagctgaataatcttttcggataggagcttttcgaatgtggctctgctttggtgt 42040  T
Q  528 tg 529  Q
    ||    
T  42039 tg 42038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119; HSP #2
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 97 - 312
Target Start/End: Complemental strand, 42494 - 42282
Alignment:
Q  97 ttcgtagtcagtaactcttgttgtggtttttagggttgttaaggtgtttagggtgtttgaaggaagtgggtctcgttgtgttgagctttttccttttgat 196  Q
    ||||| |||| || ||||||||   |||||| |||||||||| ||||||| |||||||| ||| ||  | |||| ||| | | ||| ||||||||| |||    
T  42494 ttcgtcgtcactagctcttgtttgcgtttttggggttgttaaagtgtttatggtgtttggagggagccgatctcattgagctaagccttttcctttggat 42395  T
Q  197 cagtttgttgtttgcacgaccgcatatatatcacgtcgtt-gtcatactttttgtgtgttggttgtcggtgggccggttacttttgcttcaagatcggga 295  Q
      ||||||||||||||| |||    || ||||| |||||| ||| |||| ||||| || |||||  || |||| |||||| ||||||||| |||||||||    
T  42394 atgtttgttgtttgcaccacc----atctatcatgtcgtttgtcttactgtttgtatgctggttcccgatgggtcggttaattttgcttcgagatcggga 42299  T
Q  296 gtcggtgtctagctgca 312  Q
    |||| ||||||||||||    
T  42298 gtcgatgtctagctgca 42282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 59; Significance: 1e-24; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 75 - 309
Target Start/End: Complemental strand, 17657382 - 17657147
Alignment:
Q  75 gcctctggtattcggatccttgttcgtagtcagtaactcttgttgtggtttttagggttgttaaggtgtttagggtgtttgaaggaagtgggtctcgttg 174  Q
    ||||||| ||||||| |||||||| || |||| || ||||||||    ||||| ||  |||||||||||||| |||||||| |||||| || || |||||    
T  17657382 gcctctgttattcgggtccttgtttgttgtcactagctcttgtttgcatttttgggactgttaaggtgtttatggtgtttggaggaagcggatcccgttg 17657283  T
Q  175 tgttgagctttttccttttgatcagtttgttgtttgcacgaccgcatatatatcacgtcg-----ttgtcatactttttgtgtgttggttgtcggtgggc 269  Q
       ||||  |||| |||||||||  |||||||| ||| | ||||    ||||||| ||||     |||||||||||||||||||||||||  || |||||    
T  17657282 aactgagagtttttcttttgatctatttgttgtgtgctccaccg----tatatcatgtcgatcgtttgtcatactttttgtgtgttggtttccgatgggc 17657187  T
Q  270 cggttacttttgcttcaagatcgggagtcggtgtctagct 309  Q
    |||||| ||||||||| |||||||||||||||| ||||||    
T  17657186 cggttaattttgcttcgagatcgggagtcggtggctagct 17657147  T

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Target: chr8; HSP #2
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 331 - 528
Target Start/End: Complemental strand, 17657101 - 17656904
Alignment:
Q  331 tgaggggtgcctttctgatttggtcctaaagtttggtggaccgatcacttttgattcgagatcggcagtcaattctttggatcagnnnnnnnnnnnnnnn 430  Q
    ||||||||||| |||| | |||| |||||||| ||||||  |||||||||||||||||||||||| ||||| |||||||| |||                    
T  17657101 tgaggggtgcccttctaagttggacctaaagtatggtgggtcgatcacttttgattcgagatcgggagtcagttctttggctcaagtttggttttggact 17657002  T
Q  431 nnnnatggtttctttcggtgaatcagaggtcgagaggtggtggaagttgattgatctttcagataggagcttttcggatgcggctcagctttggtgtt 528  Q
        |||||||||||||||| ||| |||||||| |||||||||||| ||| |||||||||| ||||||||||||| || | |||||| ||||||||||    
T  17657001 ttttatggtttctttcggtggatcggaggtcgataggtggtggaagctgaatgatctttcatataggagcttttcagaggtggctcaactttggtgtt 17656904  T

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Target: chr8; HSP #3
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 468 - 562
Target Start/End: Complemental strand, 8862563 - 8862469
Alignment:
Q  468 tggtggaagttgattgatctttcagataggagcttttcggatgcggctcagctttggtgttgggtgtttttctttgggggtgagtaatgacgacg 562  Q
    ||||||||| ||| ||||||||| |||| || |||||| |||| ||||||||||||||| |||||||||||||||||| || |||| ||||||||    
T  8862563 tggtggaagctgaatgatctttcggatatgaacttttcagatgtggctcagctttggtggtgggtgtttttctttgggagtcagtagtgacgacg 8862469  T

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Target: chr8; HSP #4
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 328 - 410
Target Start/End: Complemental strand, 10248655 - 10248573
Alignment:
Q  328 gggtgaggggtgcctttctgatttggtcctaaagtttggtggaccgatcacttttgattcgagatcggcagtcaattctttgg 410  Q
    |||||||||||| | |||| |||| |||||||| |||||||||||||||||||||||||| ||||||| ||||| ||||||||    
T  10248655 gggtgaggggtgtccttctaattttgtcctaaaatttggtggaccgatcacttttgattcaagatcgggagtcagttctttgg 10248573  T

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Target: chr8; HSP #5
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 245 - 313
Target Start/End: Complemental strand, 10248763 - 10248695
Alignment:
Q  245 ttttgtgtgttggttgtcggtgggccggttacttttgcttcaagatcgggagtcggtgtctagctgcaa 313  Q
    ||||||||| |||||  ||||||||| |||||||||||||| |||||||||||||||||||||||||||    
T  10248763 ttttgtgtggtggtttccggtgggccagttacttttgcttcgagatcgggagtcggtgtctagctgcaa 10248695  T

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Target: chr8; HSP #6
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 327 - 401
Target Start/End: Complemental strand, 15821482 - 15821408
Alignment:
Q  327 agggtgaggggtgcctttctgatttggtcctaaagtttggtggaccgatcacttttgattcgagatcggcagtca 401  Q
    |||| |||||||||| | |||||||||| ||||||| |||||| | ||||||||||||||||||||||| |||||    
T  15821482 agggcgaggggtgccctgctgatttggttctaaagtctggtgggctgatcacttttgattcgagatcgggagtca 15821408  T

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Target: chr8; HSP #7
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 332 - 409
Target Start/End: Complemental strand, 24995493 - 24995416
Alignment:
Q  332 gaggggtgcctttctgatttggtcctaaagtttggtggaccgatcacttttgattcgagatcggcagtcaattctttg 409  Q
    |||||||| ||| || ||||||| ||| ||| |||||| ||||||||||||||||||||||||| ||||| |||||||    
T  24995493 gaggggtgtcttgctaatttggtactatagtctggtgggccgatcacttttgattcgagatcgggagtcagttctttg 24995416  T

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Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 328 - 410
Target Start/End: Complemental strand, 17720807 - 17720726
Alignment:
Q  328 gggtgaggggtgcctttctgatttggtcctaaagtttggtggaccgatcacttttgattcgagatcggcagtcaattctttgg 410  Q
    |||| |||||||||| |||| |||||||||||||| |||||| | |||| ||||||||||| |||||| ||||| ||||||||    
T  17720807 gggtaaggggtgcctgtctggtttggtcctaaagtatggtgggctgatcgcttttgattcg-gatcgggagtcagttctttgg 17720726  T

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Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 247 - 313
Target Start/End: Complemental strand, 24995604 - 24995538
Alignment:
Q  247 ttgtgtgttggttgtcggtgggccggttacttttgcttcaagatcgggagtcggtgtctagctgcaa 313  Q
    ||||||| ||||| ||||||||||||||  ||| ||||| |||||||||||||| ||||||||||||    
T  24995604 ttgtgtgctggttttcggtgggccggttcatttggcttcgagatcgggagtcggggtctagctgcaa 24995538  T

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Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 328 - 410
Target Start/End: Complemental strand, 30236230 - 30236148
Alignment:
Q  328 gggtgaggggtgcctttctgatttggtcctaaagtttggtggaccgatcacttttgattcgagatcggcagtcaattctttgg 410  Q
    |||| ||||||||| ||||||||||||  | |||| ||||||  ||||| |||||||||||||||||| ||||| ||||||||    
T  30236230 gggtaaggggtgcccttctgatttggttttgaagtctggtgggacgatcgcttttgattcgagatcgggagtcagttctttgg 30236148  T

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Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 335 - 409
Target Start/End: Complemental strand, 31207457 - 31207383
Alignment:
Q  335 gggtgcctttctgatttggtcctaaagtttggtggaccgatcacttttgattcgagatcggcagtcaattctttg 409  Q
    ||||||| | || ||||||| ||| ||| |||||| ||||||||||||||||||||||||| ||||| |||||||    
T  31207457 gggtgccctgctaatttggtactatagtctggtgggccgatcacttttgattcgagatcgggagtcagttctttg 31207383  T

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Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 328 - 409
Target Start/End: Original strand, 9519478 - 9519559
Alignment:
Q  328 gggtgaggggtgcctttctgatttggtcctaaagtttggtggaccgatcacttttgattcgagatcggcagtcaattctttg 409  Q
    |||||||||||||| | || ||||||| ||| ||| | |||| ||||||| ||||||||||||||||| ||||| |||||||    
T  9519478 gggtgaggggtgccctgctaatttggtactatagtctagtgggccgatcagttttgattcgagatcgggagtcagttctttg 9519559  T

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Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 349 - 410
Target Start/End: Original strand, 15906686 - 15906747
Alignment:
Q  349 tttggtcctaaagtttggtggaccgatcacttttgattcgagatcggcagtcaattctttgg 410  Q
    ||||||||| |||| |||||| |||||||| |||||||||||||||| ||||| ||||||||    
T  15906686 tttggtcctgaagtctggtgggccgatcacatttgattcgagatcgggagtcagttctttgg 15906747  T

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Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 332 - 409
Target Start/End: Original strand, 36630820 - 36630897
Alignment:
Q  332 gaggggtgcctttctgatttggtcctaaagtttggtggaccgatcacttttgattcgagatcggcagtcaattctttg 409  Q
    |||||||||| | || ||||||| ||||||| |||||| |||||||||||| ||||||||||||  |||| |||||||    
T  36630820 gaggggtgccctgctaatttggttctaaagtctggtgggccgatcacttttaattcgagatcgggtgtcagttctttg 36630897  T

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Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 578 - 665
Target Start/End: Complemental strand, 8862439 - 8862352
Alignment:
Q  578 gttgttctcgtgtaggagtatgttttaggtggtaacgtatattttggtgggtgttatcatcatgggtgttttttatagtatttatttt 665  Q
    |||||||||||||| ||||  |||||||||||| |||| |||||| ||||||||| || |   ||||||||||||| || ||||||||    
T  8862439 gttgttctcgtgtaagagtcagttttaggtggtgacgtgtatttttgtgggtgttgtccttcggggtgttttttatggtgtttatttt 8862352  T

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Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 585 - 652
Target Start/End: Complemental strand, 10248376 - 10248309
Alignment:
Q  585 tcgtgtaggagtatgttttaggtggtaacgtatattttggtgggtgttatcatcatgggtgtttttta 652  Q
    ||||| |||||| ||||||||||||| |||| |||||||| ||||||| || ||| ||||||||||||    
T  10248376 tcgtgaaggagtttgttttaggtggtgacgtgtattttggcgggtgttgtcctcaagggtgtttttta 10248309  T

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Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 246 - 313
Target Start/End: Complemental strand, 31210400 - 31210333
Alignment:
Q  246 tttgtgtgttggttgtcggtgggccggttacttttgcttcaagatcgggagtcggtgtctagctgcaa 313  Q
    |||||| | ||||| ||||||||||||||  ||| |||||||||||||||||| | ||||||||||||    
T  31210400 tttgtgcgctggttttcggtgggccggttcatttggcttcaagatcgggagtcagggtctagctgcaa 31210333  T

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Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 327 - 394
Target Start/End: Original strand, 35062435 - 35062502
Alignment:
Q  327 agggtgaggggtgcctttctgatttggtcctaaagtttggtggaccgatcacttttgattcgagatcg 394  Q
    ||||| |||||||||| ||||||||||| || |||| |||||| ||||||  ||||||||||||||||    
T  35062435 agggtaaggggtgcctctctgatttggttctgaagtctggtgggccgatcgattttgattcgagatcg 35062502  T

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Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 456 - 510
Target Start/End: Complemental strand, 12198042 - 12197988
Alignment:
Q  456 gaggtcgagaggtggtggaagttgattgatctttcagataggagcttttcggatg 510  Q
    |||||||||||||| |||||||| | ||||||||| |||| ||||||||||||||    
T  12198042 gaggtcgagaggtgatggaagttcaatgatctttcggatatgagcttttcggatg 12197988  T

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Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 456 - 510
Target Start/End: Complemental strand, 12442470 - 12442416
Alignment:
Q  456 gaggtcgagaggtggtggaagttgattgatctttcagataggagcttttcggatg 510  Q
    |||||||||||||| |||||||| | ||||||||| |||| ||||||||||||||    
T  12442470 gaggtcgagaggtgatggaagttcaatgatctttcggatatgagcttttcggatg 12442416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 327 - 409
Target Start/End: Complemental strand, 16457563 - 16457482
Alignment:
Q  327 agggtgaggggtgcctttctgatttggtcctaaagtttggtggaccgatcacttttgattcgagatcggcagtcaattctttg 409  Q
    |||| |||||||| | | || ||||| | ||| |||||||||| ||||||||||||||||||||||||| ||||| |||||||    
T  16457563 agggcgaggggtgtcctgctaatttgatactatagtttggtgg-ccgatcacttttgattcgagatcgggagtcagttctttg 16457482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 343 - 409
Target Start/End: Complemental strand, 32945790 - 32945724
Alignment:
Q  343 ttctgatttggtcctaaagtttggtggaccgatcacttttgattcgagatcggcagtcaattctttg 409  Q
    |||||||||| | || |||| | |||| | ||||||||||||||||||||||| |||||||||||||    
T  32945790 ttctgatttgattctgaagtatagtgggctgatcacttttgattcgagatcgggagtcaattctttg 32945724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 332 - 401
Target Start/End: Complemental strand, 32066393 - 32066324
Alignment:
Q  332 gaggggtgcctttctgatttggtcctaaagtttggtggaccgatcacttttgattcgagatcggcagtca 401  Q
    |||||||||| | || ||||||| ||| ||| |||||| ||||||||||||||||||| ||||| |||||    
T  32066393 gaggggtgccctgctaatttggtgctatagtctggtgggccgatcacttttgattcgaaatcgggagtca 32066324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 332 - 393
Target Start/End: Complemental strand, 34389103 - 34389042
Alignment:
Q  332 gaggggtgcctttctgatttggtcctaaagtttggtggaccgatcacttttgattcgagatc 393  Q
    |||||||||| | || ||||||| ||| ||| |||||| |||||||||||||||||||||||    
T  34389103 gaggggtgccctgctaatttggtactatagtctggtgggccgatcacttttgattcgagatc 34389042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 213
Target Start/End: Complemental strand, 10248918 - 10248791
Alignment:
Q  86 tcggatccttgttcgtagtcagtaactcttgttgtggtttttagggttgttaaggtgtttagggtgtttgaaggaagtgggtctcgttgtgttgagcttt 185  Q
    |||| ||||| ||||| |||| || ||||||||   |||||| || ||||||||||||||| |||||||| ||| ||  |||| ||||| | | ||  |     
T  10248918 tcgggtccttattcgtcgtcactagctcttgtttgagttttttggattgttaaggtgtttaaggtgtttggagggagcaggtcccgttgagcttagtcta 10248819  T
Q  186 ttccttttgatcagtttgttgtttgcac 213  Q
    |||||||||||  |||||||||||||||    
T  10248818 ttccttttgattggtttgttgtttgcac 10248791  T

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Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 247 - 313
Target Start/End: Original strand, 9519371 - 9519437
Alignment:
Q  247 ttgtgtgttggttgtcggtgggccggttacttttgcttcaagatcgggagtcggtgtctagctgcaa 313  Q
    ||||||| ||||| || || ||||||||  ||| ||||| |||||||||||||| ||||||||||||    
T  9519371 ttgtgtgctggttttcagtaggccggttcatttggcttcgagatcgggagtcggggtctagctgcaa 9519437  T

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Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 435 - 489
Target Start/End: Complemental strand, 10248548 - 10248494
Alignment:
Q  435 atggtttctttcggtgaatcagaggtcgagaggtggtggaagttgattgatcttt 489  Q
    ||||||||||| |||| ||| |||| || ||||||||||||| ||||||||||||    
T  10248548 atggtttcttttggtggatcggaggccgcgaggtggtggaagctgattgatcttt 10248494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 344 - 406
Target Start/End: Original strand, 10552263 - 10552325
Alignment:
Q  344 tctgatttggtcctaaagtttggtggaccgatcacttttgattcgagatcggcagtcaattct 406  Q
    ||||||||||| || |||| |||||| |||||| |||||||||| ||||||| ||||| ||||    
T  10552263 tctgatttggttctgaagtctggtgggccgatcgcttttgattctagatcgggagtcagttct 10552325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 247 - 313
Target Start/End: Complemental strand, 34389214 - 34389148
Alignment:
Q  247 ttgtgtgttggttgtcggtgggccggttacttttgcttcaagatcgggagtcggtgtctagctgcaa 313  Q
    ||||||| ||||| ||| | ||||||||  ||| ||||| |||||||||||||| ||||||||||||    
T  34389214 ttgtgtgctggttttcgataggccggttcatttggcttcgagatcgggagtcggggtctagctgcaa 34389148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 247 - 313
Target Start/End: Original strand, 36630709 - 36630775
Alignment:
Q  247 ttgtgtgttggttgtcggtgggccggttacttttgcttcaagatcgggagtcggtgtctagctgcaa 313  Q
    ||||||||||||| ||||| ||||||||  ||| ||||| |||||||||| ||  ||||||||||||    
T  36630709 ttgtgtgttggttttcggtaggccggttcatttggcttcgagatcgggagacgaggtctagctgcaa 36630775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 440 - 489
Target Start/End: Complemental strand, 17720696 - 17720647
Alignment:
Q  440 ttctttcggtgaatcagaggtcgagaggtggtggaagttgattgatcttt 489  Q
    ||||||||||| |   ||||| ||||||||||||||||||||||||||||    
T  17720696 ttctttcggtggacttgaggttgagaggtggtggaagttgattgatcttt 17720647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 332 - 409
Target Start/End: Complemental strand, 37986956 - 37986879
Alignment:
Q  332 gaggggtgcctttctgatttggtcctaaagtttggtggaccgatcacttttgattcgagatcggcagtcaattctttg 409  Q
    |||||||||| | || |||||||  || ||| |||||| || |||| ||||||||||||||||| ||||| |||||||    
T  37986956 gaggggtgccctgctaatttggtgttatagtctggtgggccaatcatttttgattcgagatcgggagtcagttctttg 37986879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 247 - 312
Target Start/End: Complemental strand, 37987067 - 37987002
Alignment:
Q  247 ttgtgtgttggttgtcggtgggccggttacttttgcttcaagatcgggagtcggtgtctagctgca 312  Q
    ||||||| ||||| ||||||||||||||  ||| ||||| ||||||| |||||| |||||| ||||    
T  37987067 ttgtgtgctggttttcggtgggccggttcatttggcttcgagatcggtagtcggggtctagttgca 37987002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1613 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 2)
Name: scaffold1613
Description:

Target: scaffold1613; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 343 - 410
Target Start/End: Complemental strand, 1104 - 1037
Alignment:
Q  343 ttctgatttggtcctaaagtttggtggaccgatcacttttgattcgagatcggcagtcaattctttgg 410  Q
    ||||||||||||| | |||| |||||| |||||| |||||||||||||||||| ||||| ||||||||    
T  1104 ttctgatttggtcatgaagtctggtgggccgatcgcttttgattcgagatcgggagtcagttctttgg 1037  T

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Target: scaffold1613; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 264 - 313
Target Start/End: Complemental strand, 1207 - 1158
Alignment:
Q  264 gtgggccggttacttttgcttcaagatcgggagtcggtgtctagctgcaa 313  Q
    |||||||| ||||||||||||| |||| |||||| |||||||||||||||    
T  1207 gtgggccgattacttttgcttcgagattgggagttggtgtctagctgcaa 1158  T

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Target: scaffold1384 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold1384
Description:

Target: scaffold1384; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 578 - 674
Target Start/End: Complemental strand, 1472 - 1372
Alignment:
Q  578 gttgttctcgtgtaggagtatgttttaggtggtaacgtatattttggtgggt---gttatcatcatgggtgttttttatagtattta-ttttcgggtgtt 673  Q
    |||||||||||||||||||  |||||||||||| |||| |||||| ||||||   ||| || | | ||||||||||||| || |||| ||||||||||||    
T  1472 gttgttctcgtgtaggagtcagttttaggtggtgacgtgtatttttgtgggttttgttgtccttaggggtgttttttatggtgtttatttttcgggtgtt 1373  T
Q  674 c 674  Q
    |    
T  1372 c 1372  T

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Target: scaffold0062 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 328 - 394
Target Start/End: Original strand, 47072 - 47138
Alignment:
Q  328 gggtgaggggtgcctttctgatttggtcctaaagtttggtggaccgatcacttttgattcgagatcg 394  Q
    |||||||||||||| |||||||| |  ||| | || ||||| ||| |||||||||||||||||||||    
T  47072 gggtgaggggtgcccttctgattagaccctgatgtctggtgaaccaatcacttttgattcgagatcg 47138  T

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Target: scaffold0068 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 332 - 401
Target Start/End: Complemental strand, 35869 - 35800
Alignment:
Q  332 gaggggtgcctttctgatttggtcctaaagtttggtggaccgatcacttttgattcgagatcggcagtca 401  Q
    |||||||||||  || |||||||  || ||| | |||| ||||||||||||||||||||||||| |||||    
T  35869 gaggggtgcctagctaatttggttatatagtctagtgggccgatcacttttgattcgagatcgggagtca 35800  T

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