View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
Legend |
| Query |
| Query hiting target |
| Query hiting target's complemental strand |
| Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF1263_low_21 (Length: 251)
Name: NF1263_low_21
Description: NF1263
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
[»] NF1263_low_21 |
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[»] scaffold0314 (1 HSPs) |
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[»] scaffold0024 (1 HSPs) |
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Alignment Details
Target: scaffold0314 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0314
Description:
Target: scaffold0314; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 92 - 146
Target Start/End: Original strand, 8953 - 9007
Alignment:
Q |
92 |
cgataaaattgtgagaaaatgacataattcaacgtaatcacatgtgtcggcgtca |
146 |
Q |
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|
|||||||||| ||||||||||||||||||||||||||||||| ||||||| |||| |
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|
T |
8953 |
cgataaaattttgagaaaatgacataattcaacgtaatcacaagtgtcggtgtca |
9007 |
T |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 9)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 86 - 138
Target Start/End: Original strand, 10031569 - 10031621
Alignment:
Q |
86 |
tgacaccgataaaattgtgagaaaatgacataattcaacgtaatcacatgtgt |
138 |
Q |
|
|
|||||||||||||||| ||||||||||||||||||||| ||||||||| |||| |
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|
T |
10031569 |
tgacaccgataaaattttgagaaaatgacataattcaatgtaatcacaagtgt |
10031621 |
T |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 86 - 141
Target Start/End: Original strand, 19369816 - 19369871
Alignment:
Q |
86 |
tgacaccgataaaattgtgagaaaatgacataattcaacgtaatcacatgtgtcgg |
141 |
Q |
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|
|||||| ||||||||| ||||||||||||||||||||| ||||||||| ||||||| |
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|
T |
19369816 |
tgacacggataaaattttgagaaaatgacataattcaatgtaatcacaagtgtcgg |
19369871 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 92 - 141
Target Start/End: Complemental strand, 6751936 - 6751887
Alignment:
Q |
92 |
cgataaaattgtgagaaaatgacataattcaacgtaatcacatgtgtcgg |
141 |
Q |
|
|
|||||||||| ||||||||||||||||||||| ||||||||| ||||||| |
|
|
T |
6751936 |
cgataaaattttgagaaaatgacataattcaatgtaatcacaagtgtcgg |
6751887 |
T |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 103 - 141
Target Start/End: Original strand, 10158000 - 10158038
Alignment:
Q |
103 |
tgagaaaatgacataattcaacgtaatcacatgtgtcgg |
141 |
Q |
|
|
||||||||||||||||||||| ||||||||||||||||| |
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|
T |
10158000 |
tgagaaaatgacataattcaatgtaatcacatgtgtcgg |
10158038 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 87 - 140
Target Start/End: Original strand, 5579654 - 5579707
Alignment:
Q |
87 |
gacaccgataaaattgtgagaaaatgacataattcaacgtaatcacatgtgtcg |
140 |
Q |
|
|
||||||||||||||| ||||||||||||||| ||||| ||| ||||| |||||| |
|
|
T |
5579654 |
gacaccgataaaattttgagaaaatgacatagttcaatgtagtcacaagtgtcg |
5579707 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 80 - 133
Target Start/End: Original strand, 1334654 - 1334707
Alignment:
Q |
80 |
acacactgacaccgataaaattgtgagaaaatgacataattcaacgtaatcaca |
133 |
Q |
|
|
||||| |||||| ||||||||| ||| |||| |||||||||||| ||||||||| |
|
|
T |
1334654 |
acacattgacacggataaaattttgaaaaaaggacataattcaatgtaatcaca |
1334707 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 92 - 129
Target Start/End: Original strand, 29959180 - 29959217
Alignment:
Q |
92 |
cgataaaattgtgagaaaatgacataattcaacgtaat |
129 |
Q |
|
|
|||||||||| ||||||||||||||||||||| ||||| |
|
|
T |
29959180 |
cgataaaattttgagaaaatgacataattcaatgtaat |
29959217 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 103 - 139
Target Start/End: Original strand, 7942271 - 7942307
Alignment:
Q |
103 |
tgagaaaatgacataattcaacgtaatcacatgtgtc |
139 |
Q |
|
|
||||| ||||||||||||||| ||||||||||||||| |
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|
T |
7942271 |
tgagacaatgacataattcaatgtaatcacatgtgtc |
7942307 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 103 - 139
Target Start/End: Complemental strand, 9024219 - 9024183
Alignment:
Q |
103 |
tgagaaaatgacataattcaacgtaatcacatgtgtc |
139 |
Q |
|
|
||||||||||||||||||||| ||||||| ||||||| |
|
|
T |
9024219 |
tgagaaaatgacataattcaatgtaatcatatgtgtc |
9024183 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 14)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 85 - 148
Target Start/End: Original strand, 44362664 - 44362727
Alignment:
Q |
85 |
ctgacaccgataaaattgtgagaaaatgacataattcaacgtaatcacatgtgtcggcgtcaga |
148 |
Q |
|
|
||||||||||||||||| |||||||||||||||||| || ||||||||| |||| || |||||| |
|
|
T |
44362664 |
ctgacaccgataaaattttgagaaaatgacataatttaatgtaatcacaagtgttggtgtcaga |
44362727 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 86 - 141
Target Start/End: Original strand, 37496703 - 37496758
Alignment:
Q |
86 |
tgacaccgataaaattgtgagaaaatgacataattcaacgtaatcacatgtgtcgg |
141 |
Q |
|
|
|||||||||||| || ||||||||||||||||||||| ||||||||| ||||||| |
|
|
T |
37496703 |
tgacaccgataattttttgagaaaatgacataattcaatgtaatcacaagtgtcgg |
37496758 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 93 - 138
Target Start/End: Original strand, 13307883 - 13307928
Alignment:
Q |
93 |
gataaaattgtgagaaaatgacataattcaacgtaatcacatgtgt |
138 |
Q |
|
|
||||||||| ||||||||||||||||||||| ||||||||| |||| |
|
|
T |
13307883 |
gataaaattttgagaaaatgacataattcaatgtaatcacaagtgt |
13307928 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 82 - 139
Target Start/End: Complemental strand, 18513305 - 18513248
Alignment:
Q |
82 |
acactgacaccgataaaattgtgagaaaatgacataattcaacgtaatcacatgtgtc |
139 |
Q |
|
|
|||| ||||||||||| | | ||||||||||||||||||||| ||||||| ||||||| |
|
|
T |
18513305 |
acacagacaccgataataatttgagaaaatgacataattcaatgtaatcatatgtgtc |
18513248 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 80 - 131
Target Start/End: Complemental strand, 34589772 - 34589721
Alignment:
Q |
80 |
acacactgacaccgataaaattgtgagaaaatgacataattcaacgtaatca |
131 |
Q |
|
|
||||| |||||||||||| | | ||||||||||||||||||||| ||||||| |
|
|
T |
34589772 |
acacattgacaccgataacaatttgagaaaatgacataattcaatgtaatca |
34589721 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 141
Target Start/End: Original strand, 13117429 - 13117483
Alignment:
Q |
87 |
gacaccgataaaattgtgagaaaatgacataattcaacgtaatcacatgtgtcgg |
141 |
Q |
|
|
|||||| |||||||| |||||||||||| ||||||| ||||||||| ||||||| |
|
|
T |
13117429 |
gacaccaataaaatttggagaaaatgacaaaattcaatgtaatcacaagtgtcgg |
13117483 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 141
Target Start/End: Complemental strand, 14465353 - 14465299
Alignment:
Q |
87 |
gacaccgataaaattgtgagaaaatgacataattcaacgtaatcacatgtgtcgg |
141 |
Q |
|
|
||||||||||| | | ||||||||||||||||||||| |||||| ||||||||| |
|
|
T |
14465353 |
gacaccgataataatttgagaaaatgacataattcaatttaatcatatgtgtcgg |
14465299 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 128
Target Start/End: Original strand, 28663491 - 28663533
Alignment:
Q |
86 |
tgacaccgataaaattgtgagaaaatgacataattcaacgtaa |
128 |
Q |
|
|
|||||| ||||||||| ||||||||||||||||||||| |||| |
|
|
T |
28663491 |
tgacacggataaaattttgagaaaatgacataattcaatgtaa |
28663533 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 105 - 139
Target Start/End: Complemental strand, 45615456 - 45615422
Alignment:
Q |
105 |
agaaaatgacataattcaacgtaatcacatgtgtc |
139 |
Q |
|
|
|||||||||||||||| |||||||||||||||||| |
|
|
T |
45615456 |
agaaaatgacataattgaacgtaatcacatgtgtc |
45615422 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 103 - 140
Target Start/End: Original strand, 683068 - 683105
Alignment:
Q |
103 |
tgagaaaatgacataattcaacgtaatcacatgtgtcg |
140 |
Q |
|
|
|||||||||||||||||| || |||||||||||||||| |
|
|
T |
683068 |
tgagaaaatgacataattgaatgtaatcacatgtgtcg |
683105 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 196 - 225
Target Start/End: Complemental strand, 4089993 - 4089964
Alignment:
Q |
196 |
acacttaataaaccaagaaagcatttatat |
225 |
Q |
|
|
|||||||||||||||||||||||||||||| |
|
|
T |
4089993 |
acacttaataaaccaagaaagcatttatat |
4089964 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 103 - 139
Target Start/End: Complemental strand, 9988742 - 9988706
Alignment:
Q |
103 |
tgagaaaatgacataattcaacgtaatcacatgtgtc |
139 |
Q |
|
|
|||||||||||||||||| || ||||||||||||||| |
|
|
T |
9988742 |
tgagaaaatgacataattgaatgtaatcacatgtgtc |
9988706 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 103 - 139
Target Start/End: Complemental strand, 22597023 - 22596987
Alignment:
Q |
103 |
tgagaaaatgacataattcaacgtaatcacatgtgtc |
139 |
Q |
|
|
||||||||| |||||||||||||||||||||||||| |
|
|
T |
22597023 |
tgagaaaattgcataattcaacgtaatcacatgtgtc |
22596987 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 141
Target Start/End: Complemental strand, 40224543 - 40224503
Alignment:
Q |
101 |
tgtgagaaaatgacataattcaacgtaatcacatgtgtcgg |
141 |
Q |
|
|
|||||||||||||||||||| || ||||||| ||||||||| |
|
|
T |
40224543 |
tgtgagaaaatgacataatttaatgtaatcatatgtgtcgg |
40224503 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 3)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 87 - 141
Target Start/End: Original strand, 14332409 - 14332462
Alignment:
Q |
87 |
gacaccgataaaattgtgagaaaatgacataattcaacgtaatcacatgtgtcgg |
141 |
Q |
|
|
||||||||||||||| ||||||||||||||||||||| |||||||||| |||||| |
|
|
T |
14332409 |
gacaccgataaaatt-tgagaaaatgacataattcaatgtaatcacatatgtcgg |
14332462 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 88 - 139
Target Start/End: Original strand, 40176604 - 40176655
Alignment:
Q |
88 |
acaccgataaaattgtgagaaaatgacataattcaacgtaatcacatgtgtc |
139 |
Q |
|
|
|||||||||||||| |||||||||||| | |||||| ||||||||||||||| |
|
|
T |
40176604 |
acaccgataaaattttgagaaaatgacttcattcaatgtaatcacatgtgtc |
40176655 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 141
Target Start/End: Original strand, 31667443 - 31667479
Alignment:
Q |
105 |
agaaaatgacataattcaacgtaatcacatgtgtcgg |
141 |
Q |
|
|
|||||||||||||||| || ||||||||||||||||| |
|
|
T |
31667443 |
agaaaatgacataattaaatgtaatcacatgtgtcgg |
31667479 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 38; Significance: 0.000000000001; HSPs: 8)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 88 - 141
Target Start/End: Complemental strand, 43586063 - 43586010
Alignment:
Q |
88 |
acaccgataaaattgtgagaaaatgacataattcaacgtaatcacatgtgtcgg |
141 |
Q |
|
|
|||| ||||||||| ||||||||||||||||||||| ||||||||| ||||||| |
|
|
T |
43586063 |
acacagataaaattttgagaaaatgacataattcaatgtaatcacaagtgtcgg |
43586010 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 87 - 139
Target Start/End: Complemental strand, 18512201 - 18512149
Alignment:
Q |
87 |
gacaccgataaaattgtgagaaaatgacataattcaacgtaatcacatgtgtc |
139 |
Q |
|
|
||||||||||||||| ||||||||| | ||||||||| ||||||||||||||| |
|
|
T |
18512201 |
gacaccgataaaattttgagaaaataatataattcaatgtaatcacatgtgtc |
18512149 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 86 - 141
Target Start/End: Complemental strand, 45000905 - 45000851
Alignment:
Q |
86 |
tgacaccgataaaattgtgagaaaatgacataattcaacgtaatcacatgtgtcgg |
141 |
Q |
|
|
|||||||||||||||| ||||||||||||| ||||||| ||||||| ||||||||| |
|
|
T |
45000905 |
tgacaccgataaaatt-tgagaaaatgacacaattcaatgtaatcatatgtgtcgg |
45000851 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 91 - 140
Target Start/End: Complemental strand, 13501133 - 13501084
Alignment:
Q |
91 |
ccgataaaattgtgagaaaatgacataattcaacgtaatcacatgtgtcg |
140 |
Q |
|
|
||||||||||| | ||||||||||||||||||| ||||||||| |||||| |
|
|
T |
13501133 |
ccgataaaattttaagaaaatgacataattcaatgtaatcacaagtgtcg |
13501084 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 80 - 137
Target Start/End: Original strand, 39399905 - 39399962
Alignment:
Q |
80 |
acacactgacaccgataaaattgtgagaaaatgacataattcaacgtaatcacatgtg |
137 |
Q |
|
|
||||| |||||||||| ||||| | |||||||||||||||||||| || ||||||||| |
|
|
T |
39399905 |
acacattgacaccgatgaaatttttagaaaatgacataattcaacctattcacatgtg |
39399962 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 88 - 139
Target Start/End: Original strand, 18570973 - 18571024
Alignment:
Q |
88 |
acaccgataaaattgtgagaaaatgacataattcaacgtaatcacatgtgtc |
139 |
Q |
|
|
|||||||||| | | ||||||||||||||||||||| ||||||| ||||||| |
|
|
T |
18570973 |
acaccgataataatttgagaaaatgacataattcaatgtaatcatatgtgtc |
18571024 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 90 - 141
Target Start/End: Original strand, 33884054 - 33884105
Alignment:
Q |
90 |
accgataaaattgtgagaaaatgacataattcaacgtaatcacatgtgtcgg |
141 |
Q |
|
|
||||||||||||||||||||||||||| ||||| ||||| ||| ||||||| |
|
|
T |
33884054 |
accgataaaattgtgagaaaatgacatgattcagtgtaattacaagtgtcgg |
33884105 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 88 - 141
Target Start/End: Complemental strand, 14373485 - 14373432
Alignment:
Q |
88 |
acaccgataaaattgtgagaaaatgacataattcaacgtaatcacatgtgtcgg |
141 |
Q |
|
|
||||| |||||||| ||| ||||||||||||||| ||||||||||||||||| |
|
|
T |
14373485 |
acaccaataaaattttgacgcaatgacataattcaatgtaatcacatgtgtcgg |
14373432 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 36; Significance: 0.00000000002; HSPs: 12)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 88 - 139
Target Start/End: Complemental strand, 5937479 - 5937428
Alignment:
Q |
88 |
acaccgataaaattgtgagaaaatgacataattcaacgtaatcacatgtgtc |
139 |
Q |
|
|
|||| ||||||||| ||||||||||||||||||||| ||||||||| ||||| |
|
|
T |
5937479 |
acacggataaaattttgagaaaatgacataattcaatgtaatcacaagtgtc |
5937428 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 86 - 141
Target Start/End: Complemental strand, 38134466 - 38134411
Alignment:
Q |
86 |
tgacaccgataaaattgtgagaaaatgacataattcaacgtaatcacatgtgtcgg |
141 |
Q |
|
|
|||||||||||| | | ||||||||||||||||||||| ||||||| ||||||||| |
|
|
T |
38134466 |
tgacaccgataataatttgagaaaatgacataattcaatgtaatcatatgtgtcgg |
38134411 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 87 - 141
Target Start/End: Original strand, 1885573 - 1885627
Alignment:
Q |
87 |
gacaccgataaaattgtgagaaaatgacataattcaacgtaatcacatgtgtcgg |
141 |
Q |
|
|
||||| ||||||||| ||| ||||||||||||||||| ||||||||| ||||||| |
|
|
T |
1885573 |
gacacggataaaattttgaaaaaatgacataattcaatgtaatcacaagtgtcgg |
1885627 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 80 - 138
Target Start/End: Complemental strand, 35238250 - 35238192
Alignment:
Q |
80 |
acacactgacaccgataaaattgtgagaaaatgacataattcaacgtaatcacatgtgt |
138 |
Q |
|
|
||||| |||||||||||| ||| ||||||||||||||||||||| |||||||| |||| |
|
|
T |
35238250 |
acacattgacaccgataatattttgagaaaatgacataattcaatataatcacacgtgt |
35238192 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 94 - 139
Target Start/End: Complemental strand, 2144591 - 2144546
Alignment:
Q |
94 |
ataaaattgtgagaaaatgacataattcaacgtaatcacatgtgtc |
139 |
Q |
|
|
|||||||| ||||||||||||||||||||| ||||||||| ||||| |
|
|
T |
2144591 |
ataaaattttgagaaaatgacataattcaatgtaatcacacgtgtc |
2144546 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 93 - 138
Target Start/End: Complemental strand, 48964115 - 48964070
Alignment:
Q |
93 |
gataaaattgtgagaaaatgacataattcaacgtaatcacatgtgt |
138 |
Q |
|
|
||||||||||||||||||||||||||||||| |||||||| |||| |
|
|
T |
48964115 |
gataaaattgtgagaaaatgacataattcaatttaatcacaagtgt |
48964070 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 97 - 137
Target Start/End: Complemental strand, 2143902 - 2143862
Alignment:
Q |
97 |
aaattgtgagaaaatgacataattcaacgtaatcacatgtg |
137 |
Q |
|
|
||||| ||||||||||||||||||||| ||||||||||||| |
|
|
T |
2143902 |
aaattttgagaaaatgacataattcaatgtaatcacatgtg |
2143862 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 82 - 141
Target Start/End: Original strand, 25956442 - 25956499
Alignment:
Q |
82 |
acactgacaccgataaaattgtgagaaaatgacataattcaacgtaatcacatgtgtcgg |
141 |
Q |
|
|
|||||||||| |||||||||||| |||||||||||||||| ||||||||| ||||||| |
|
|
T |
25956442 |
acactgacacaaataaaattgtga--aaatgacataattcaatgtaatcacaagtgtcgg |
25956499 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 103 - 138
Target Start/End: Complemental strand, 44172933 - 44172898
Alignment:
Q |
103 |
tgagaaaatgacataattcaacgtaatcacatgtgt |
138 |
Q |
|
|
||||||||||||||||||||| |||||||||||||| |
|
|
T |
44172933 |
tgagaaaatgacataattcaatgtaatcacatgtgt |
44172898 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 88 - 141
Target Start/End: Complemental strand, 22801799 - 22801746
Alignment:
Q |
88 |
acaccgataaaattgtgagaaaatgacataattcaacgtaatcacatgtgtcgg |
141 |
Q |
|
|
|||||||| ||||| ||||| |||||||||||||| ||||||||| ||||||| |
|
|
T |
22801799 |
acaccgatcaaattttgagataatgacataattcactgtaatcacaagtgtcgg |
22801746 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 93 - 138
Target Start/End: Complemental strand, 28635223 - 28635178
Alignment:
Q |
93 |
gataaaattgtgagaaaatgacataattcaacgtaatcacatgtgt |
138 |
Q |
|
|
||||||||| ||||||||| || |||||||||||||||||||||| |
|
|
T |
28635223 |
gataaaattttgagaaaatttcacaattcaacgtaatcacatgtgt |
28635178 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 103 - 139
Target Start/End: Original strand, 37775998 - 37776034
Alignment:
Q |
103 |
tgagaaaatgacataattcaacgtaatcacatgtgtc |
139 |
Q |
|
|
|||||||||||||||||| || ||||||||||||||| |
|
|
T |
37775998 |
tgagaaaatgacataattaaatgtaatcacatgtgtc |
37776034 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 35; Significance: 0.00000000009; HSPs: 9)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 87 - 141
Target Start/End: Complemental strand, 24295196 - 24295142
Alignment:
Q |
87 |
gacaccgataaaattgtgagaaaatgacataattcaacgtaatcacatgtgtcgg |
141 |
Q |
|
|
|||| |||||||||||||||||||||||| |||| || ||||||||| ||||||| |
|
|
T |
24295196 |
gacatcgataaaattgtgagaaaatgacacaatttaatgtaatcacaagtgtcgg |
24295142 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 88 - 138
Target Start/End: Original strand, 27733848 - 27733898
Alignment:
Q |
88 |
acaccgataaaattgtgagaaaatgacataattcaacgtaatcacatgtgt |
138 |
Q |
|
|
|||||||||||||| ||||||||||| ||||||||| ||||||||| |||| |
|
|
T |
27733848 |
acaccgataaaattttgagaaaatgatataattcaatgtaatcacaagtgt |
27733898 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 87 - 140
Target Start/End: Complemental strand, 26915299 - 26915246
Alignment:
Q |
87 |
gacaccgataaaattgtgagaaaatgacataattcaacgtaatcacatgtgtcg |
140 |
Q |
|
|
||||| ||||||||| |||||||||||||||||| || ||||||||| |||||| |
|
|
T |
26915299 |
gacacggataaaattttgagaaaatgacataatttaatgtaatcacaagtgtcg |
26915246 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 87 - 139
Target Start/End: Original strand, 42874522 - 42874574
Alignment:
Q |
87 |
gacaccgataaaattgtgagaaaatgacataattcaacgtaatcacatgtgtc |
139 |
Q |
|
|
||||||| ||| ||| ||||||||||||||||||||| ||||||||| ||||| |
|
|
T |
42874522 |
gacaccgttaacattttgagaaaatgacataattcaatgtaatcacaagtgtc |
42874574 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 97 - 140
Target Start/End: Original strand, 31119097 - 31119140
Alignment:
Q |
97 |
aaattgtgagaaaatgacataattcaacgtaatcacatgtgtcg |
140 |
Q |
|
|
||||| ||||||||||||||||||||| ||||||||| |||||| |
|
|
T |
31119097 |
aaattttgagaaaatgacataattcaatgtaatcacaagtgtcg |
31119140 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 146
Target Start/End: Complemental strand, 31548352 - 31548293
Alignment:
Q |
87 |
gacaccgataaaattgtgagaaaatgacataattcaacgtaatcacatgtgtcggcgtca |
146 |
Q |
|
|
||||||||||| | ||| ||||||||||||||||| ||||||||||||||||| |||| |
|
|
T |
31548352 |
gacaccgataattatttgataaaatgacataattcaatgtaatcacatgtgtcggtgtca |
31548293 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 87 - 140
Target Start/End: Complemental strand, 34074037 - 34073984
Alignment:
Q |
87 |
gacaccgataaaattgtgagaaaatgacataattcaacgtaatcacatgtgtcg |
140 |
Q |
|
|
||||||||||||||| ||| |||||||||||||| || ||||||| | |||||| |
|
|
T |
34074037 |
gacaccgataaaattttgaaaaaatgacataatttaatgtaatcataagtgtcg |
34073984 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 107 - 139
Target Start/End: Original strand, 1586628 - 1586660
Alignment:
Q |
107 |
aaaatgacataattcaacgtaatcacatgtgtc |
139 |
Q |
|
|
|||||||||||||| |||||||||||||||||| |
|
|
T |
1586628 |
aaaatgacataattgaacgtaatcacatgtgtc |
1586660 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 141
Target Start/End: Original strand, 32696382 - 32696418
Alignment:
Q |
105 |
agaaaatgacataattcaacgtaatcacatgtgtcgg |
141 |
Q |
|
|
|||||||||||||||| ||| |||||||||||||||| |
|
|
T |
32696382 |
agaaaatgacataattgaacataatcacatgtgtcgg |
32696418 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 35; Significance: 0.00000000009; HSPs: 7)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 87 - 133
Target Start/End: Complemental strand, 30080560 - 30080514
Alignment:
Q |
87 |
gacaccgataaaattgtgagaaaatgacataattcaacgtaatcaca |
133 |
Q |
|
|
||||| ||||||||| ||||||||||||||||||||| ||||||||| |
|
|
T |
30080560 |
gacactgataaaattttgagaaaatgacataattcaatgtaatcaca |
30080514 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 89 - 139
Target Start/End: Original strand, 38784808 - 38784858
Alignment:
Q |
89 |
caccgataaaattgtgagaaaatgacataattcaacgtaatcacatgtgtc |
139 |
Q |
|
|
||||||||||||||||| ||||||| ||||||||| ||||||||| ||||| |
|
|
T |
38784808 |
caccgataaaattgtgaaaaaatgatataattcaatgtaatcacaagtgtc |
38784858 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 103 - 140
Target Start/End: Original strand, 10009842 - 10009879
Alignment:
Q |
103 |
tgagaaaatgacataattcaacgtaatcacatgtgtcg |
140 |
Q |
|
|
||||||||||||||||||||| |||||||||||||||| |
|
|
T |
10009842 |
tgagaaaatgacataattcaatgtaatcacatgtgtcg |
10009879 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 94 - 141
Target Start/End: Original strand, 10010561 - 10010608
Alignment:
Q |
94 |
ataaaattgtgagaaaatgacataattcaacgtaatcacatgtgtcgg |
141 |
Q |
|
|
|||||||| ||| |||||||||||||||| ||||||||||||||||| |
|
|
T |
10010561 |
ataaaattttgaaaaaatgacataattcattgtaatcacatgtgtcgg |
10010608 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 86 - 148
Target Start/End: Complemental strand, 19167637 - 19167574
Alignment:
Q |
86 |
tgacaccgataaaattgtg-agaaaatgacataattcaacgtaatcacatgtgtcggcgtcaga |
148 |
Q |
|
|
|||||||||||||||| || | ||||||||| ||||||| ||||||||| ||||||| |||||| |
|
|
T |
19167637 |
tgacaccgataaaattttgaaaaaaatgacacaattcaatgtaatcacaagtgtcggtgtcaga |
19167574 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 140
Target Start/End: Complemental strand, 26205816 - 26205766
Alignment:
Q |
90 |
accgataaaattgtgagaaaatgacataattcaacgtaatcacatgtgtcg |
140 |
Q |
|
|
|||||||||||| |||||||||||||||||||| ||||||| | |||||| |
|
|
T |
26205816 |
accgataaaattttgagaaaatgacataattcagtgtaatcataggtgtcg |
26205766 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 87 - 119
Target Start/End: Original strand, 309158 - 309190
Alignment:
Q |
87 |
gacaccgataaaattgtgagaaaatgacataat |
119 |
Q |
|
|
||||||||||||||| ||||||||||||||||| |
|
|
T |
309158 |
gacaccgataaaattttgagaaaatgacataat |
309190 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 35; Significance: 0.00000000009; HSPs: 8)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 87 - 141
Target Start/End: Complemental strand, 49179774 - 49179720
Alignment:
Q |
87 |
gacaccgataaaattgtgagaaaatgacataattcaacgtaatcacatgtgtcgg |
141 |
Q |
|
|
||||||||||||||| ||||||| ||||||||||| | ||||||||| ||||||| |
|
|
T |
49179774 |
gacaccgataaaattttgagaaagtgacataattcgatgtaatcacaagtgtcgg |
49179720 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 148
Target Start/End: Complemental strand, 14338537 - 14338481
Alignment:
Q |
92 |
cgataaaattgtgagaaaatgacataattcaacgtaatcacatgtgtcggcgtcaga |
148 |
Q |
|
|
|||||||||| ||| ||||||||||||||||| ||||||||| |||||| |||||| |
|
|
T |
14338537 |
cgataaaattttgaaaaaatgacataattcaatgtaatcacaaatgtcggtgtcaga |
14338481 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 153
Target Start/End: Original strand, 20691335 - 20691385
Alignment:
Q |
103 |
tgagaaaatgacataattcaacgtaatcacatgtgtcggcgtcagagacac |
153 |
Q |
|
|
|||||||||||||||||||| ||||||| ||||||||| |||||| |||| |
|
|
T |
20691335 |
tgagaaaatgacataattcagtgtaatcatatgtgtcggtgtcagacacac |
20691385 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 141
Target Start/End: Original strand, 44427857 - 44427895
Alignment:
Q |
103 |
tgagaaaatgacataattcaacgtaatcacatgtgtcgg |
141 |
Q |
|
|
||||||||||||||||| ||| ||||||||||||||||| |
|
|
T |
44427857 |
tgagaaaatgacataatccaatgtaatcacatgtgtcgg |
44427895 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 103 - 139
Target Start/End: Complemental strand, 9210868 - 9210832
Alignment:
Q |
103 |
tgagaaaatgacataattcaacgtaatcacatgtgtc |
139 |
Q |
|
|
||||||||||||||||||||| | ||||||||||||| |
|
|
T |
9210868 |
tgagaaaatgacataattcaatggaatcacatgtgtc |
9210832 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 136
Target Start/End: Complemental strand, 34409384 - 34409352
Alignment:
Q |
104 |
gagaaaatgacataattcaacgtaatcacatgt |
136 |
Q |
|
|
|||||||||||||||||||| |||||||||||| |
|
|
T |
34409384 |
gagaaaatgacataattcaatgtaatcacatgt |
34409352 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 133
Target Start/End: Complemental strand, 42076802 - 42076762
Alignment:
Q |
93 |
gataaaattgtgagaaaatgacataattcaacgtaatcaca |
133 |
Q |
|
|
|||||||||||| ||||||||| |||||||| ||||||||| |
|
|
T |
42076802 |
gataaaattgtgggaaaatgacctaattcaatgtaatcaca |
42076762 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 144
Target Start/End: Complemental strand, 52558182 - 52558130
Alignment:
Q |
92 |
cgataaaattgtgagaaaatgacataattcaacgtaatcacatgtgtcggcgt |
144 |
Q |
|
|
|||||||| | |||||||| |||||||||||| ||||||||||| || ||||| |
|
|
T |
52558182 |
cgataaaaatttgagaaaaggacataattcaatgtaatcacatgcgtgggcgt |
52558130 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0024 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0024
Description:
Target: scaffold0024; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 130
Target Start/End: Complemental strand, 18167 - 18124
Alignment:
Q |
87 |
gacaccgataaaattgtgagaaaatgacataattcaacgtaatc |
130 |
Q |
|
|
||||||||||||||| ||||||||| ||||||||||| |||||| |
|
|
T |
18167 |
gacaccgataaaattttgagaaaataacataattcaatgtaatc |
18124 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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