View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12640_high_3 (Length: 429)
Name: NF12640_high_3
Description: NF12640
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12640_high_3 |
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Alignment Details
Target: chr1 (Bit Score: 293; Significance: 1e-164; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 293; E-Value: 1e-164
Query Start/End: Original strand, 115 - 419
Target Start/End: Original strand, 16947767 - 16948071
Alignment:
| Q |
115 |
gaattaaattcacctgagagtgtaaagcaatggctttgcctctaagctgattgaaacgtttctttccaacaatatcacgtgtaaccacaacaagtggagc |
214 |
Q |
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| T |
16947767 |
gaattaaattcacctgagagtgtaaagcaatggctttgcctctaagctgattgaaacgtttctttccaacaatatcacgagtaaccacaacaagtggagc |
16947866 |
T |
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| Q |
215 |
aaaaatacctttcccttcattaacattcttcatcataggttgcaacctcactggcttactaactcttccaatacgaagttgcgaagaaactgacttagtc |
314 |
Q |
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| T |
16947867 |
aaaaatacctttcccttcattaacattcttcatcataggttgcaacctcactggtttactaactcttccaatacgaagttgcgaagaaactgacttagcc |
16947966 |
T |
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| Q |
315 |
aacatggtgtaatcttcaccaactatagaagttccccagcttccatagaatgatgaaccaacacaacctgttgcagaaattgaagtggccattttagttc |
414 |
Q |
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| T |
16947967 |
aacatggtgtaatcttcaccaactatagaagttccccagcttccatagaatgatgaaccaacacaacctgttgcagaaattgaagtggccattttagttc |
16948066 |
T |
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| Q |
415 |
ctatg |
419 |
Q |
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| T |
16948067 |
ctatg |
16948071 |
T |
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