View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12641_low_6 (Length: 243)

Name: NF12641_low_6
Description: NF12641
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12641_low_6
NF12641_low_6
[»] chr7 (51 HSPs)
chr7 (1-127)||(33691477-33691603)
chr7 (1-101)||(9709610-9709710)
chr7 (1-127)||(13880385-13880511)
chr7 (1-101)||(14426795-14426895)
chr7 (1-77)||(30944157-30944233)
chr7 (3-127)||(2500308-2500432)
chr7 (7-100)||(16111660-16111754)
chr7 (8-127)||(30026179-30026298)
chr7 (8-97)||(15088777-15088866)
chr7 (7-100)||(35952449-35952542)
chr7 (1-101)||(16542814-16542913)
chr7 (1-101)||(16622749-16622848)
chr7 (1-101)||(28622143-28622243)
chr7 (25-101)||(48236711-48236787)
chr7 (3-86)||(2913413-2913496)
chr7 (3-127)||(13648982-13649106)
chr7 (39-127)||(23279791-23279879)
chr7 (15-127)||(28409329-28409441)
chr7 (3-127)||(14193358-14193486)
chr7 (3-101)||(33605970-33606068)
chr7 (1-86)||(10882965-10883050)
chr7 (1-86)||(11319686-11319771)
chr7 (7-100)||(12174102-12174195)
chr7 (1-77)||(30945190-30945266)
chr7 (3-86)||(13692624-13692707)
chr7 (8-127)||(11793195-11793314)
chr7 (8-86)||(16316368-16316446)
chr7 (8-127)||(44467338-44467457)
chr7 (1-86)||(13137716-13137801)
chr7 (1-86)||(48800433-48800518)
chr7 (1-127)||(9069861-9069980)
chr7 (34-101)||(15469781-15469848)
chr7 (8-127)||(4494761-4494880)
chr7 (37-127)||(22577771-22577862)
chr7 (2-101)||(2265308-2265409)
chr7 (8-86)||(13303109-13303187)
chr7 (8-86)||(13730502-13730579)
chr7 (9-127)||(12366501-12366619)
chr7 (8-77)||(24788381-24788450)
chr7 (25-101)||(7339660-7339736)
chr7 (8-51)||(16556576-16556619)
chr7 (8-51)||(16609043-16609086)
chr7 (8-86)||(21695658-21695736)
chr7 (28-86)||(29935170-29935228)
chr7 (8-55)||(8183234-8183282)
chr7 (8-55)||(27871983-27872031)
chr7 (8-127)||(331938-332057)
chr7 (12-54)||(1293258-1293301)
chr7 (8-101)||(5826254-5826349)
chr7 (23-77)||(19710800-19710855)
chr7 (8-55)||(32264546-32264594)
[»] chr2 (45 HSPs)
chr2 (1-127)||(22317891-22318017)
chr2 (1-101)||(20151771-20151871)
chr2 (1-127)||(23235286-23235412)
chr2 (3-86)||(25829385-25829468)
chr2 (8-127)||(38781666-38781785)
chr2 (1-101)||(28711433-28711534)
chr2 (2-101)||(28700932-28701032)
chr2 (8-127)||(13963705-13963824)
chr2 (1-86)||(30667268-30667353)
chr2 (8-101)||(1586760-1586855)
chr2 (3-86)||(22260686-22260769)
chr2 (8-101)||(9015092-9015185)
chr2 (1-101)||(31800606-31800707)
chr2 (3-86)||(20568485-20568568)
chr2 (1-99)||(6573861-6573959)
chr2 (7-57)||(30557053-30557103)
chr2 (12-101)||(45086855-45086945)
chr2 (1-127)||(30621466-30621592)
chr2 (1-127)||(30624087-30624213)
chr2 (8-100)||(31327677-31327770)
chr2 (8-100)||(31334398-31334491)
chr2 (2-101)||(34321624-34321725)
chr2 (3-124)||(25036966-25037087)
chr2 (3-124)||(25041073-25041194)
chr2 (7-66)||(6392921-6392980)
chr2 (8-86)||(18376673-18376751)
chr2 (5-86)||(38631237-38631318)
chr2 (2-101)||(22802754-22802854)
chr2 (8-86)||(19540684-19540762)
chr2 (8-86)||(22187855-22187933)
chr2 (8-86)||(24850402-24850480)
chr2 (3-57)||(28140400-28140454)
chr2 (8-57)||(10009533-10009582)
chr2 (8-77)||(24377356-24377425)
chr2 (8-55)||(22776079-22776127)
chr2 (8-55)||(22781457-22781505)
chr2 (8-127)||(31967744-31967865)
chr2 (9-57)||(40782757-40782805)
chr2 (8-55)||(44840709-44840757)
chr2 (8-97)||(3277274-3277365)
chr2 (8-57)||(23184112-23184161)
chr2 (8-57)||(23595369-23595418)
chr2 (8-57)||(39037422-39037471)
chr2 (8-56)||(22454757-22454805)
chr2 (8-55)||(40332366-40332414)
[»] chr8 (44 HSPs)
chr8 (1-101)||(21933178-21933278)
chr8 (1-127)||(18120872-18120998)
chr8 (3-101)||(30421216-30421314)
chr8 (1-101)||(17441597-17441697)
chr8 (8-101)||(16189283-16189376)
chr8 (1-127)||(20382144-20382270)
chr8 (1-101)||(23185016-23185116)
chr8 (8-127)||(22745754-22745873)
chr8 (1-86)||(20255357-20255442)
chr8 (25-100)||(16207556-16207631)
chr8 (1-86)||(19156459-19156544)
chr8 (2-101)||(1237946-1238046)
chr8 (3-86)||(16681095-16681176)
chr8 (2-101)||(45538228-45538328)
chr8 (2-100)||(9320864-9320963)
chr8 (7-101)||(24832828-24832923)
chr8 (8-101)||(15335815-15335909)
chr8 (8-101)||(15424880-15424974)
chr8 (8-101)||(15516184-15516278)
chr8 (2-127)||(40845118-40845245)
chr8 (4-82)||(17525523-17525601)
chr8 (3-77)||(29693596-29693670)
chr8 (1-86)||(17267748-17267833)
chr8 (1-101)||(17797698-17797800)
chr8 (2-101)||(36105504-36105605)
chr8 (1-86)||(39693812-39693897)
chr8 (8-127)||(6408001-6408122)
chr8 (8-127)||(14989205-14989325)
chr8 (1-86)||(17914736-17914821)
chr8 (8-100)||(19943520-19943613)
chr8 (8-127)||(18151410-18151530)
chr8 (14-101)||(19927335-19927423)
chr8 (8-101)||(13430406-13430501)
chr8 (28-127)||(602483-602582)
chr8 (8-127)||(24646621-24646740)
chr8 (3-57)||(33083135-33083189)
chr8 (7-101)||(3598102-3598198)
chr8 (3-86)||(17702005-17702088)
chr8 (8-127)||(18320939-18321058)
chr8 (5-97)||(2811103-2811194)
chr8 (1-57)||(18680076-18680131)
chr8 (1-57)||(18719244-18719299)
chr8 (7-55)||(24551588-24551636)
chr8 (8-55)||(45292894-45292942)
[»] chr6 (42 HSPs)
chr6 (1-101)||(32544553-32544653)
chr6 (1-127)||(18435859-18435985)
chr6 (1-127)||(26971948-26972074)
chr6 (1-101)||(21235382-21235482)
chr6 (1-101)||(22802410-22802510)
chr6 (1-101)||(16264930-16265030)
chr6 (1-101)||(15954972-15955073)
chr6 (8-126)||(19689008-19689126)
chr6 (1-101)||(20730484-20730584)
chr6 (3-127)||(21625385-21625509)
chr6 (3-101)||(34451448-34451546)
chr6 (1-86)||(9718128-9718213)
chr6 (3-127)||(15531361-15531485)
chr6 (12-123)||(13435828-13435939)
chr6 (7-100)||(20487666-20487759)
chr6 (2-101)||(19832764-19832864)
chr6 (1-101)||(29918286-29918388)
chr6 (8-86)||(13602447-13602525)
chr6 (7-96)||(139136-139225)
chr6 (7-96)||(147157-147246)
chr6 (1-86)||(19086435-19086520)
chr6 (2-97)||(17381716-17381812)
chr6 (8-101)||(16877506-16877600)
chr6 (2-127)||(21618521-21618648)
chr6 (1-86)||(19624247-19624332)
chr6 (1-86)||(24117113-24117198)
chr6 (8-101)||(12349254-12349349)
chr6 (8-101)||(12423514-12423609)
chr6 (8-101)||(22058344-22058439)
chr6 (1-127)||(33351681-33351809)
chr6 (3-77)||(12715223-12715297)
chr6 (8-77)||(18378545-18378614)
chr6 (3-86)||(15302458-15302541)
chr6 (8-101)||(14100237-14100330)
chr6 (2-101)||(16336440-16336540)
chr6 (10-86)||(15987488-15987564)
chr6 (8-86)||(25597754-25597832)
chr6 (8-83)||(19065805-19065882)
chr6 (12-127)||(20112452-20112567)
chr6 (25-77)||(17608107-17608160)
chr6 (33-86)||(18383955-18384008)
chr6 (8-57)||(23284855-23284904)
[»] chr3 (47 HSPs)
chr3 (1-101)||(18121396-18121496)
chr3 (1-101)||(47207994-47208094)
chr3 (1-127)||(28582391-28582517)
chr3 (1-101)||(2561458-2561564)
chr3 (3-97)||(47405230-47405324)
chr3 (7-101)||(50300508-50300602)
chr3 (1-127)||(31303673-31303799)
chr3 (1-101)||(11223831-11223931)
chr3 (5-101)||(11869374-11869470)
chr3 (8-127)||(52920696-52920815)
chr3 (8-97)||(20627258-20627347)
chr3 (8-101)||(40800117-40800210)
chr3 (1-101)||(53056502-53056603)
chr3 (8-127)||(6091023-6091142)
chr3 (3-101)||(14969600-14969698)
chr3 (2-98)||(29855711-29855808)
chr3 (1-86)||(41495258-41495343)
chr3 (7-127)||(49553237-49553359)
chr3 (128-212)||(25631909-25631993)
chr3 (8-86)||(17238744-17238822)
chr3 (1-86)||(20646439-20646524)
chr3 (7-100)||(33583552-33583645)
chr3 (7-100)||(33598172-33598265)
chr3 (3-86)||(13948622-13948705)
chr3 (7-101)||(38177464-38177558)
chr3 (8-127)||(14392755-14392874)
chr3 (8-86)||(49642569-49642647)
chr3 (2-101)||(2785381-2785482)
chr3 (2-101)||(5216272-5216373)
chr3 (1-86)||(15903483-15903568)
chr3 (2-101)||(14955743-14955843)
chr3 (2-86)||(37467587-37467671)
chr3 (2-101)||(24775273-24775375)
chr3 (8-101)||(12726038-12726131)
chr3 (3-47)||(16658475-16658519)
chr3 (8-101)||(40851252-40851347)
chr3 (8-77)||(22141034-22141104)
chr3 (1-86)||(12962891-12962976)
chr3 (8-55)||(2028576-2028624)
chr3 (37-89)||(13824354-13824406)
chr3 (8-55)||(21606325-21606373)
chr3 (8-101)||(21605417-21605514)
chr3 (8-101)||(21636433-21636530)
chr3 (8-86)||(22803891-22803969)
chr3 (32-97)||(46349606-46349672)
chr3 (9-101)||(49666171-49666265)
chr3 (8-55)||(46796196-46796244)
[»] chr1 (38 HSPs)
chr1 (1-127)||(32785622-32785748)
chr1 (3-127)||(22599851-22599975)
chr1 (3-127)||(36134460-36134584)
chr1 (8-127)||(22154165-22154284)
chr1 (1-86)||(1900617-1900702)
chr1 (5-127)||(16234981-16235103)
chr1 (1-127)||(22427028-22427154)
chr1 (3-101)||(29216069-29216167)
chr1 (2-101)||(2834975-2835075)
chr1 (2-101)||(25448228-25448328)
chr1 (3-86)||(38282869-38282952)
chr1 (8-86)||(1578124-1578202)
chr1 (3-101)||(2268814-2268912)
chr1 (7-100)||(2327104-2327198)
chr1 (5-101)||(2267344-2267440)
chr1 (25-101)||(39200720-39200796)
chr1 (8-86)||(19717796-19717874)
chr1 (12-86)||(28492146-28492220)
chr1 (2-127)||(44821212-44821339)
chr1 (1-101)||(22464486-22464587)
chr1 (8-99)||(10251283-10251376)
chr1 (3-101)||(7310090-7310185)
chr1 (9-77)||(20954174-20954242)
chr1 (1-47)||(35040434-35040480)
chr1 (8-127)||(21703121-21703242)
chr1 (8-86)||(10757696-10757773)
chr1 (3-77)||(33256072-33256146)
chr1 (3-77)||(33276244-33276318)
chr1 (1-57)||(12284723-12284779)
chr1 (8-55)||(23025053-23025101)
chr1 (8-101)||(21120764-21120859)
chr1 (4-101)||(21204625-21204724)
chr1 (8-101)||(21984863-21984958)
chr1 (8-101)||(30572457-30572552)
chr1 (1-86)||(30893346-30893432)
chr1 (8-86)||(48704491-48704569)
chr1 (44-101)||(35402146-35402203)
chr1 (8-55)||(21134907-21134955)
[»] chr4 (39 HSPs)
chr4 (1-101)||(13575877-13575977)
chr4 (1-101)||(10073201-10073301)
chr4 (8-127)||(37435228-37435347)
chr4 (3-127)||(45833676-45833800)
chr4 (1-86)||(3395904-3395989)
chr4 (17-101)||(3497928-3498012)
chr4 (1-101)||(14604640-14604740)
chr4 (1-101)||(54680176-54680276)
chr4 (8-127)||(56034844-56034963)
chr4 (8-101)||(3793376-3793469)
chr4 (1-127)||(19620799-19620925)
chr4 (1-101)||(29121652-29121753)
chr4 (1-127)||(19884967-19885095)
chr4 (3-86)||(9141143-9141226)
chr4 (2-101)||(55732074-55732173)
chr4 (1-101)||(22675283-22675383)
chr4 (7-86)||(14904067-14904146)
chr4 (8-127)||(12810901-12811020)
chr4 (8-101)||(16853765-16853858)
chr4 (8-85)||(55380528-55380605)
chr4 (3-86)||(12601381-12601464)
chr4 (2-101)||(6517766-6517868)
chr4 (2-74)||(8105950-8106023)
chr4 (2-101)||(17247539-17247639)
chr4 (9-101)||(25650872-25650966)
chr4 (1-86)||(16632717-16632802)
chr4 (1-86)||(29680306-29680391)
chr4 (4-127)||(3105157-3105282)
chr4 (8-101)||(16940247-16940346)
chr4 (7-101)||(10693137-10693233)
chr4 (7-101)||(10906903-10906999)
chr4 (8-55)||(14571312-14571360)
chr4 (8-55)||(22191126-22191174)
chr4 (3-127)||(14153685-14153811)
chr4 (8-86)||(40846368-40846447)
chr4 (2-101)||(413283-413387)
chr4 (3-77)||(14833673-14833747)
chr4 (10-101)||(39419471-39419564)
chr4 (8-49)||(40860961-40861002)
[»] scaffold0251 (1 HSPs)
scaffold0251 (1-127)||(7974-8100)
[»] scaffold0217 (3 HSPs)
scaffold0217 (1-101)||(19319-19419)
scaffold0217 (1-101)||(21841-21943)
scaffold0217 (8-101)||(9853-9948)
[»] scaffold0007 (1 HSPs)
scaffold0007 (1-127)||(143375-143501)
[»] scaffold1359 (1 HSPs)
scaffold1359 (1-101)||(414-514)
[»] scaffold0023 (1 HSPs)
scaffold0023 (3-127)||(103843-103967)
[»] chr5 (31 HSPs)
chr5 (1-100)||(33022929-33023028)
chr5 (12-127)||(7745393-7745508)
chr5 (1-101)||(5430149-5430249)
chr5 (1-101)||(31118141-31118241)
chr5 (3-86)||(21910809-21910892)
chr5 (3-77)||(26784624-26784698)
chr5 (1-77)||(14086333-14086409)
chr5 (3-86)||(17815250-17815333)
chr5 (1-95)||(33933583-33933678)
chr5 (2-101)||(15517252-15517353)
chr5 (8-127)||(20551149-20551269)
chr5 (2-95)||(26759462-26759556)
chr5 (1-101)||(29138163-29138265)
chr5 (8-127)||(9089199-9089320)
chr5 (8-86)||(6512235-6512313)
chr5 (8-101)||(11994202-11994296)
chr5 (1-86)||(89224-89309)
chr5 (1-77)||(4887287-4887364)
chr5 (9-86)||(21072028-21072105)
chr5 (1-57)||(41566248-41566304)
chr5 (2-101)||(42243979-42244079)
chr5 (8-101)||(3245194-3245289)
chr5 (8-101)||(30115645-30115740)
chr5 (8-86)||(23412778-23412856)
chr5 (7-101)||(28139858-28139954)
chr5 (2-96)||(30743293-30743388)
chr5 (8-57)||(12352635-12352684)
chr5 (8-55)||(10849054-10849102)
chr5 (8-101)||(25929933-25930027)
chr5 (8-57)||(21198838-21198887)
chr5 (20-56)||(6499520-6499556)
[»] scaffold1331 (1 HSPs)
scaffold1331 (1-101)||(336-436)
[»] scaffold0003 (1 HSPs)
scaffold0003 (1-101)||(89797-89897)
[»] scaffold0227 (1 HSPs)
scaffold0227 (8-101)||(22952-23045)
[»] scaffold0005 (3 HSPs)
scaffold0005 (1-101)||(212638-212738)
scaffold0005 (8-55)||(246016-246064)
scaffold0005 (3-77)||(5952-6026)
[»] scaffold0485 (1 HSPs)
scaffold0485 (8-101)||(9103-9195)
[»] scaffold0171 (1 HSPs)
scaffold0171 (1-127)||(27145-27271)
[»] scaffold0116 (1 HSPs)
scaffold0116 (8-101)||(20697-20790)
[»] scaffold0012 (1 HSPs)
scaffold0012 (2-101)||(215206-215306)
[»] scaffold0439 (1 HSPs)
scaffold0439 (8-127)||(6408-6528)
[»] scaffold0359 (1 HSPs)
scaffold0359 (8-127)||(5391-5511)
[»] scaffold0026 (2 HSPs)
scaffold0026 (3-86)||(8183-8266)
scaffold0026 (3-127)||(60302-60426)
[»] scaffold0334 (1 HSPs)
scaffold0334 (1-127)||(10078-10204)
[»] scaffold0022 (2 HSPs)
scaffold0022 (1-86)||(39696-39781)
scaffold0022 (1-86)||(137756-137841)
[»] scaffold0452 (1 HSPs)
scaffold0452 (2-101)||(1593-1693)
[»] scaffold0426 (1 HSPs)
scaffold0426 (3-86)||(13898-13981)
[»] scaffold0043 (1 HSPs)
scaffold0043 (7-101)||(78090-78185)
[»] scaffold0861 (1 HSPs)
scaffold0861 (1-87)||(4687-4773)
[»] scaffold0243 (1 HSPs)
scaffold0243 (8-86)||(4751-4829)
[»] scaffold0146 (1 HSPs)
scaffold0146 (8-86)||(15377-15455)
[»] scaffold0083 (1 HSPs)
scaffold0083 (8-86)||(25733-25811)
[»] scaffold0479 (1 HSPs)
scaffold0479 (8-101)||(10228-10321)
[»] scaffold0290 (1 HSPs)
scaffold0290 (1-86)||(18362-18447)
[»] scaffold0028 (1 HSPs)
scaffold0028 (2-101)||(5311-5411)
[»] scaffold1434 (1 HSPs)
scaffold1434 (3-62)||(552-611)
[»] scaffold0771 (1 HSPs)
scaffold0771 (3-86)||(762-845)
[»] scaffold0411 (1 HSPs)
scaffold0411 (7-127)||(12501-12621)
[»] scaffold0210 (1 HSPs)
scaffold0210 (6-93)||(1920-2007)
[»] scaffold0084 (2 HSPs)
scaffold0084 (3-86)||(32759-32842)
scaffold0084 (3-87)||(49605-49688)
[»] scaffold0065 (1 HSPs)
scaffold0065 (1-84)||(1988-2071)
[»] scaffold0066 (1 HSPs)
scaffold0066 (8-127)||(60585-60704)
[»] scaffold0471 (1 HSPs)
scaffold0471 (2-101)||(3621-3722)
[»] scaffold0337 (1 HSPs)
scaffold0337 (1-86)||(14946-15031)
[»] scaffold0247 (1 HSPs)
scaffold0247 (1-55)||(23350-23405)
[»] scaffold0527 (2 HSPs)
scaffold0527 (8-101)||(162-256)
scaffold0527 (8-101)||(8225-8319)
[»] scaffold0161 (1 HSPs)
scaffold0161 (8-127)||(9838-9956)
[»] scaffold0120 (2 HSPs)
scaffold0120 (20-127)||(36476-36583)
scaffold0120 (20-127)||(42422-42529)
[»] scaffold0004 (3 HSPs)
scaffold0004 (8-86)||(377317-377395)
scaffold0004 (8-86)||(30612-30689)
scaffold0004 (8-86)||(220528-220607)
[»] scaffold0015 (1 HSPs)
scaffold0015 (2-101)||(61090-61191)
[»] scaffold0035 (2 HSPs)
scaffold0035 (8-127)||(19174-19294)
scaffold0035 (12-101)||(98901-98992)
[»] scaffold0607 (1 HSPs)
scaffold0607 (1-101)||(7199-7301)
[»] scaffold0414 (1 HSPs)
scaffold0414 (8-101)||(6862-6958)
[»] scaffold0275 (1 HSPs)
scaffold0275 (8-71)||(8576-8640)
[»] scaffold0045 (1 HSPs)
scaffold0045 (8-101)||(87325-87420)
[»] scaffold0261 (1 HSPs)
scaffold0261 (8-86)||(5695-5773)
[»] scaffold0193 (1 HSPs)
scaffold0193 (3-57)||(16066-16120)
[»] scaffold0047 (1 HSPs)
scaffold0047 (3-77)||(30507-30581)
[»] scaffold0395 (1 HSPs)
scaffold0395 (9-86)||(13275-13352)
[»] scaffold0324 (1 HSPs)
scaffold0324 (8-57)||(10229-10278)
[»] scaffold0249 (1 HSPs)
scaffold0249 (8-55)||(17544-17592)
[»] scaffold0011 (1 HSPs)
scaffold0011 (8-55)||(65198-65246)


Alignment Details
Target: chr7 (Bit Score: 86; Significance: 3e-41; HSPs: 51)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 33691603 - 33691477
Alignment:
Q  1 actttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaa 100  Q
    ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||    
T  33691603 actttgtcttcaggagcagttctcttcagacgctttaaacttcctttttgttgattcctttgctctctattgttcttccagaacctttttaagatgtcaa 33691504  T
Q  101 annnnnnnctatggtcctgtacacttg 127  Q
    |       |||||||||||||||||||    
T  33691503 atttttgtctatggtcctgtacacttg 33691477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 9709710 - 9709610
Alignment:
Q  1 actttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaa 100  Q
    ||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||  ||||||||||||||||||    
T  9709710 actttgtcttcaggagcagttttcttcagacgctttaagcttcctttttgttgattcatttgctctctattgttcttccaagacctttttaagatgtcaa 9709611  T
Q  101 a 101  Q
    |    
T  9709610 a 9709610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 13880385 - 13880511
Alignment:
Q  1 actttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaa 100  Q
    |||||| |||||| |||| |||| ||||||||||||||||||||||||||||||||| ||| |||||| |||||||| |||||||| |||||||||||||    
T  13880385 actttgacttcagaagcacttctcttcagacgctttaagcttcctttttgttgattcctttgctctcttttgttcttccagaacctatttaagatgtcaa 13880484  T
Q  101 annnnnnnctatggtcctgtacacttg 127  Q
    |       |||||||||||||||||||    
T  13880485 atttatgtctatggtcctgtacacttg 13880511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 14426795 - 14426895
Alignment:
Q  1 actttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaa 100  Q
    ||||||||||||||||||||| | ||||||||||||||||||||||||||||||||| ||| |||| |||||||||| ||  ||||||||||||||||||    
T  14426795 actttgtcttcaggagcagttttcttcagacgctttaagcttcctttttgttgattcctttgctctttattgttcttccaagacctttttaagatgtcaa 14426894  T
Q  101 a 101  Q
    |    
T  14426895 a 14426895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 30944233 - 30944157
Alignment:
Q  1 actttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctt 77  Q
    ||||||||||||||||||||| | |||| |||||||||||||||||||||||||||||||| |||| ||||||||||    
T  30944233 actttgtcttcaggagcagttttcttcaaacgctttaagcttcctttttgttgattcatttgctctttattgttctt 30944157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 3 - 127
Target Start/End: Original strand, 2500308 - 2500432
Alignment:
Q  3 tttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaan 102  Q
    |||||||||||||||| |||| |||||| |||| ||||||||||||||||||||| ||  |||||| |||||||| || ||||| ||||||||||||||     
T  2500308 tttgtcttcaggagcacttctcttcagatgcttcaagcttcctttttgttgattccttagctctcttttgttcttccataacctatttaagatgtcaaat 2500407  T
Q  103 nnnnnnctatggtcctgtacacttg 127  Q
          |||||||| ||||||||||    
T  2500408 ttttgtctatggtcttgtacacttg 2500432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 7 - 100
Target Start/End: Complemental strand, 16111754 - 16111660
Alignment:
Q  7 tcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttc-agaacctttttaagatgtcaa 100  Q
    |||||||||||| || | ||||||||||||||||||||||||||||||||| |||||||| |||||||||| | ||| | |||||||||||||||    
T  16111754 tcttcaggagcatttttcttcagacgctttaagcttcctttttgttgattccttttctctttattgttcttccaagaccttttttaagatgtcaa 16111660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 8 - 127
Target Start/End: Original strand, 30026179 - 30026298
Alignment:
Q  8 cttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaannnnnn 107  Q
    |||||| |||| |||| |||||| |||| ||||||||||||||||||||| ||| |||||| |||||||| || ||||| ||||||||||||||          
T  30026179 cttcagaagcacttctcttcagatgcttcaagcttcctttttgttgattcctttgctctcttttgttcttccataacctatttaagatgtcaaatttttg 30026278  T
Q  108 nctatggtcctgtacacttg 127  Q
     |||||||||||||||||||    
T  30026279 tctatggtcctgtacacttg 30026298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 8 - 97
Target Start/End: Original strand, 15088777 - 15088866
Alignment:
Q  8 cttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgt 97  Q
    ||||||||||| |||| |||||| |||| ||||||||||||||||||||| ||| |||||| |||||||| |||||||| ||||||||||    
T  15088777 cttcaggagcacttctcttcagatgcttcaagcttcctttttgttgattcctttgctctcttttgttcttccagaacctatttaagatgt 15088866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 7 - 100
Target Start/End: Complemental strand, 35952542 - 35952449
Alignment:
Q  7 tcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaa 100  Q
    |||||| |||||||| | ||||||||||||||||||||||||||||||||| ||| |||| |||||||||| ||   |||||||||||||||||    
T  35952542 tcttcaagagcagttttcttcagacgctttaagcttcctttttgttgattcctttgctctttattgttcttccaaggcctttttaagatgtcaa 35952449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 16542913 - 16542814
Alignment:
Q  1 actttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaa 100  Q
    ||||||||||||| ||||||| | ||||||||||| ||||||||||||||||||||| ||| |||| |||||||||| ||  |||||||||||||| |||    
T  16542913 actttgtcttcagaagcagttttcttcagacgctt-aagcttcctttttgttgattcctttgctctttattgttcttccaacacctttttaagatgacaa 16542815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 16622749 - 16622848
Alignment:
Q  1 actttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaa 100  Q
    ||||||||||||| ||||||| | ||||||||||| ||||||||||||||||||||| ||| |||| |||||||||| ||  |||||||||||||| |||    
T  16622749 actttgtcttcagaagcagttttcttcagacgctt-aagcttcctttttgttgattcctttgctctttattgttcttccaacacctttttaagatgacaa 16622847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 28622243 - 28622143
Alignment:
Q  1 actttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaa 100  Q
    |||||||||||| |||||||  | |||| |||||||||||||| ||||||||||||| ||| |||| |||||||||| ||  ||||||||||||||||||    
T  28622243 actttgtcttcatgagcagtattcttcatacgctttaagcttcatttttgttgattcctttgctctttattgttcttccaagacctttttaagatgtcaa 28622144  T
Q  101 a 101  Q
    |    
T  28622143 a 28622143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 25 - 101
Target Start/End: Complemental strand, 48236787 - 48236711
Alignment:
Q  25 ttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaa 101  Q
    ||||||||||||||||||||||||||||||||| ||| |||| |||||||||| ||  |||||||||||||||||||    
T  48236787 ttcagacgctttaagcttcctttttgttgattcctttactctttattgttcttccaagacctttttaagatgtcaaa 48236711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 3 - 86
Target Start/End: Complemental strand, 2913496 - 2913413
Alignment:
Q  3 tttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 86  Q
    |||||||||||||||| |||| |||| | |||||||||||||||||||||||||| ||| |||||| |||||||| ||||||||    
T  2913496 tttgtcttcaggagcacttctcttcatatgctttaagcttcctttttgttgattcctttgctctcttttgttcttccagaacct 2913413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 3 - 127
Target Start/End: Original strand, 13648982 - 13649106
Alignment:
Q  3 tttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaan 102  Q
    |||||||||||||||| |||| ||||||||| |||| |||||||||||||||||| ||| |||||| ||||||||  |||||||  | ||||| |||||     
T  13648982 tttgtcttcaggagcacttctcttcagacgccttaaacttcctttttgttgattcctttgctctcttttgttcttctagaacctaataaagatatcaaat 13649081  T
Q  103 nnnnnnctatggtcctgtacacttg 127  Q
          |||||||||||||||||||    
T  13649082 ttttgtctatggtcctgtacacttg 13649106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 39 - 127
Target Start/End: Complemental strand, 23279879 - 23279791
Alignment:
Q  39 gcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaannnnnnnctatggtcctgtacacttg 127  Q
    ||||||||||||||||||| ||| ||||||||||||||| ||||||||||||| |||||||||       |||||||||||||||||||    
T  23279879 gcttcctttttgttgattcttttgctctctattgttcttccagaacctttttatgatgtcaaatttttgtctatggtcctgtacacttg 23279791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 15 - 127
Target Start/End: Original strand, 28409329 - 28409441
Alignment:
Q  15 agcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaannnnnnnctatgg 114  Q
    |||| |||| ||||||||||| || |||||||||||| ||||||||| |||||| |||||||| |||||||| ||||||||||||||       ||||||    
T  28409329 agcacttctcttcagacgcttcaaacttcctttttgtcgattcatttgctctcttttgttcttacagaacctatttaagatgtcaaatttttgtctatgg 28409428  T
Q  115 tcctgtacacttg 127  Q
    ||| |||||||||    
T  28409429 tccagtacacttg 28409441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 3 - 127
Target Start/End: Original strand, 14193358 - 14193486
Alignment:
Q  3 tttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattc----attttctctctattgttctttcagaacctttttaagatgtc 98  Q
    |||||||||||||||  |||| ||||||||||| ||||||| |||||||||||||    |||  |||||| |||||||| ||||||||||||||||||||    
T  14193358 tttgtcttcaggagcgcttctcttcagacgcttcaagcttcatttttgttgattctttaattagctctcttttgttcttccagaacctttttaagatgtc 14193457  T
Q  99 aaannnnnnnctatggtcctgtacacttg 127  Q
    |||       |||||||| ||||||||||    
T  14193458 aaatttttgtctatggtcttgtacacttg 14193486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 3 - 101
Target Start/End: Original strand, 33605970 - 33606068
Alignment:
Q  3 tttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaa 101  Q
    ||||||||||||| ||||| | |||||| | ||||||||||||| |||||||||| ||| |||| |||||||||| ||  |||||||||||||||||||    
T  33605970 tttgtcttcaggaacagttttcttcagatgttttaagcttccttattgttgattcctttgctctttattgttcttccaagacctttttaagatgtcaaa 33606068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 10883050 - 10882965
Alignment:
Q  1 actttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 86  Q
    |||||| |||||| |||| |||| ||||||||||||||||||| ||||||||||||| ||| |||||| |||||||| ||||||||    
T  10883050 actttgacttcagtagcacttctcttcagacgctttaagcttcatttttgttgattcctttgctctcttttgttcttccagaacct 10882965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 11319686 - 11319771
Alignment:
Q  1 actttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 86  Q
    |||||| ||||||||||| |||| ||||||||||||||||||||||||||||||||   || |||||| |||||||| ||||||||    
T  11319686 actttggcttcaggagcacttctcttcagacgctttaagcttcctttttgttgatttcattgctctcttttgttcttccagaacct 11319771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 7 - 100
Target Start/End: Complemental strand, 12174195 - 12174102
Alignment:
Q  7 tcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaa 100  Q
    |||||||||| |||| | |||||||| |||||||||| ||||||||||||| ||| |||| |||||||||| ||  ||||||||||||||||||    
T  12174195 tcttcaggagtagttttcttcagacgttttaagcttcttttttgttgattcctttgctctttattgttcttccaagacctttttaagatgtcaa 12174102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 30945266 - 30945190
Alignment:
Q  1 actttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctt 77  Q
    ||||||||||||||||||||| | |||||||| ||||||||||||||||||||| |||||| |||| | ||||||||    
T  30945266 actttgtcttcaggagcagttttcttcagacgttttaagcttcctttttgttgactcatttgctcttttttgttctt 30945190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 3 - 86
Target Start/End: Original strand, 13692624 - 13692707
Alignment:
Q  3 tttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 86  Q
    |||||||||||||||| |||| ||||||||| |||||||||||||||  |||||| ||| |||||| |||||||| ||||||||    
T  13692624 tttgtcttcaggagcacttctcttcagacgccttaagcttcctttttcctgattcctttgctctcttttgttcttccagaacct 13692707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 8 - 127
Target Start/End: Original strand, 11793195 - 11793314
Alignment:
Q  8 cttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaannnnnn 107  Q
    ||||||||||| ||||||||||| |||| ||||||||||||||||||||| ||  |||||| |||||||| | ||||||  | ||||| |||||          
T  11793195 cttcaggagcacttcttttcagatgcttcaagcttcctttttgttgattccttcgctctcttttgttcttcctgaacctaataaagatatcaaatttttg 11793294  T
Q  108 nctatggtcctgtacacttg 127  Q
     |||||||||||||||||||    
T  11793295 tctatggtcctgtacacttg 11793314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 8 - 86
Target Start/End: Complemental strand, 16316446 - 16316368
Alignment:
Q  8 cttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 86  Q
    ||||||||||| |||| || |||||||| ||||||||||||||||||||| ||  |||||| |||||||||||||||||    
T  16316446 cttcaggagcacttctctttagacgcttcaagcttcctttttgttgattccttagctctcttttgttctttcagaacct 16316368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 8 - 127
Target Start/End: Original strand, 44467338 - 44467457
Alignment:
Q  8 cttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaannnnnn 107  Q
    ||||||||||| |||| |||||| |||| || ||||||||||||||||||  || |||| | |||||||| |||||||| |||| |||||||||          
T  44467338 cttcaggagcacttctcttcagatgcttcaaacttcctttttgttgattccattgctctattttgttcttccagaacctatttatgatgtcaaatttttg 44467437  T
Q  108 nctatggtcctgtacacttg 127  Q
     |||||||||||||||||||    
T  44467438 tctatggtcctgtacacttg 44467457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 13137801 - 13137716
Alignment:
Q  1 actttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 86  Q
    |||||| ||||||||||| |||| |||||| |||| ||||||||||||||||||||| ||  |||||| |||||||| ||||||||    
T  13137801 actttgacttcaggagcacttctcttcagatgcttcaagcttcctttttgttgattccttacctctcttttgttcttccagaacct 13137716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 48800518 - 48800433
Alignment:
Q  1 actttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 86  Q
    |||||| ||||||||||| |||| |||||| |||| |||||||||||||||||||||  || |||||| |||||||| ||||||||    
T  48800518 actttgacttcaggagcacttctcttcagatgcttcaagcttcctttttgttgattccattgctctcttttgttcttccagaacct 48800433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 9069861 - 9069980
Alignment:
Q  1 actttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaa 100  Q
    |||||| |||||||||||||||| || |||||||||||||||       |||||||   || ||||||||||||| | ||||||||||||||||||||||    
T  9069861 actttgacttcaggagcagttctctttagacgctttaagctt-------gttgatttcattgctctctattgttcatccagaacctttttaagatgtcaa 9069953  T
Q  101 annnnnnnctatggtcctgtacacttg 127  Q
    |       |||||||||||||||||||    
T  9069954 atttttgtctatggtcctgtacacttg 9069980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 34 - 101
Target Start/End: Original strand, 15469781 - 15469848
Alignment:
Q  34 tttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaa 101  Q
    |||||||||| | ||||||||||| ||| ||||||||||||||| || ||||||||||||||||||||    
T  15469781 tttaagcttcgtatttgttgattcctttgctctctattgttcttccataacctttttaagatgtcaaa 15469848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 8 - 127
Target Start/End: Original strand, 4494761 - 4494880
Alignment:
Q  8 cttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaannnnnn 107  Q
    ||||||||||| |||| || ||| |||| ||||||||||||||||||||   || |||||| | |||||| |||||||| ||||||||||||||          
T  4494761 cttcaggagcacttctctttagatgcttcaagcttcctttttgttgatttcattgctctctttcgttcttccagaacctatttaagatgtcaaatttttg 4494860  T
Q  108 nctatggtcctgtacacttg 127  Q
     |||||||||| ||||||||    
T  4494861 tctatggtcctatacacttg 4494880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 37 - 127
Target Start/End: Complemental strand, 22577862 - 22577771
Alignment:
Q  37 aagcttcctttttgttgattcattttctct-ctattgttctttcagaacctttttaagatgtcaaannnnnnnctatggtcctgtacacttg 127  Q
    ||||||||||||||||||||||||| |||| || |||||||| |||||||| ||||||||||||||       |||||||| ||||||||||    
T  22577862 aagcttcctttttgttgattcatttgctctccttttgttcttccagaacctatttaagatgtcaaatttttttctatggtcatgtacacttg 22577771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 2 - 101
Target Start/End: Complemental strand, 2265409 - 2265308
Alignment:
Q  2 ctttgtcttcaggagcagttcttttcagacgctttaagctt-cctttttgttgattcattttctctcta-ttgttctttcagaacctttttaagatgtca 99  Q
    |||| ||||||||||||||| | |||||||||||||||||| |||||||||||||  |||  |||| || |||||||| ||  |||||||||||||||||    
T  2265409 ctttatcttcaggagcagttttcttcagacgctttaagcttccctttttgttgatgtattagctctttatttgttcttccaagacctttttaagatgtca 2265310  T
Q  100 aa 101  Q
    ||    
T  2265309 aa 2265308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 8 - 86
Target Start/End: Original strand, 13303109 - 13303187
Alignment:
Q  8 cttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 86  Q
    ||||||||||| |||| |||||||||||||| |||| ||||||||||||  ||| |||||| |||||||| || |||||    
T  13303109 cttcaggagcacttctcttcagacgctttaaacttcttttttgttgatttctttgctctcttttgttcttccataacct 13303187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 8 - 86
Target Start/End: Complemental strand, 13730579 - 13730502
Alignment:
Q  8 cttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 86  Q
    ||||||||||| |||| ||| ||||| ||||| ||||||||||||||||| ||| |||||| |||||||| ||||||||    
T  13730579 cttcaggagcacttctcttc-gacgccttaagtttcctttttgttgattcctttgctctcttttgttcttccagaacct 13730502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 127
Target Start/End: Complemental strand, 12366619 - 12366501
Alignment:
Q  9 ttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaannnnnnn 108  Q
    |||||||||| |||| || ||| |||| |||||||||||||||||||||  || |||||| || ||||| ||||||||  | ||||| |||||           
T  12366619 ttcaggagcacttctctttagatgcttcaagcttcctttttgttgattccattgctctctttttttcttccagaacctaataaagatatcaaatttttgt 12366520  T
Q  109 ctatggtcctgtacacttg 127  Q
    |||||||||||||||||||    
T  12366519 ctatggtcctgtacacttg 12366501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 8 - 77
Target Start/End: Original strand, 24788381 - 24788450
Alignment:
Q  8 cttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctt 77  Q
    ||||||||||| |||| |||||| |||| |||||||| |||||||||||||||| |||||| ||| ||||    
T  24788381 cttcaggagcacttctcttcagatgcttcaagcttccattttgttgattcatttgctctcttttggtctt 24788450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 25 - 101
Target Start/End: Complemental strand, 7339736 - 7339660
Alignment:
Q  25 ttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaa 101  Q
    |||||||||||||||| |||||||| || |||||||| |||| |||||||||| ||  || ||||||||||| ||||    
T  7339736 ttcagacgctttaagcatcctttttttttattcatttgctctttattgttcttccaagacatttttaagatgacaaa 7339660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 51
Target Start/End: Complemental strand, 16556619 - 16556576
Alignment:
Q  8 cttcaggagcagttcttttcagacgctttaagcttcctttttgt 51  Q
    |||||||||||||| | |||||||||||||||||||||||||||    
T  16556619 cttcaggagcagttttcttcagacgctttaagcttcctttttgt 16556576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 51
Target Start/End: Original strand, 16609043 - 16609086
Alignment:
Q  8 cttcaggagcagttcttttcagacgctttaagcttcctttttgt 51  Q
    |||||||||||||| | |||||||||||||||||||||||||||    
T  16609043 cttcaggagcagttttcttcagacgctttaagcttcctttttgt 16609086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 8 - 86
Target Start/End: Original strand, 21695658 - 21695736
Alignment:
Q  8 cttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 86  Q
    ||||| ||||| |||| |||| ||| || ||||||||||||||||||||| ||  |||||| |||||||| ||||||||    
T  21695658 cttcaagagcacttctcttcaaacgattcaagcttcctttttgttgattccttaactctcttttgttcttccagaacct 21695736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 28 - 86
Target Start/End: Complemental strand, 29935228 - 29935170
Alignment:
Q  28 agacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 86  Q
    ||||| |||||||||||||||||||||||| ||  |||||| |||||||| ||||||||    
T  29935228 agacgatttaagcttcctttttgttgattccttagctctcttttgttcttccagaacct 29935170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 55
Target Start/End: Original strand, 8183234 - 8183282
Alignment:
Q  8 cttcaggagcagttcttttcagacgctttaagctt-cctttttgttgat 55  Q
    |||||||||||||| | |||||||||||||||||| |||||||||||||    
T  8183234 cttcaggagcagttttattcagacgctttaagcttccctttttgttgat 8183282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 55
Target Start/End: Original strand, 27871983 - 27872031
Alignment:
Q  8 cttcaggagcagttcttttcagacgctttaagctt-cctttttgttgat 55  Q
    |||||||||||||| | |||||||||||||||||| |||||||||||||    
T  27871983 cttcaggagcagttttcttcagacgctttaagcttccctttttgttgat 27872031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 127
Target Start/End: Original strand, 331938 - 332057
Alignment:
Q  8 cttcaggagcagttctt-ttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaannnnn 106  Q
    |||||||||||||||   |||||| ||||||||||||| |||||||| ||| ||  |||||| |||||||| |||||||  | ||||||||||||         
T  331938 cttcaggagcagttcgacttcagatgctttaagcttcc-ttttgttgtttccttagctctcttttgttcttccagaaccaatataagatgtcaaattttt 332036  T
Q  107 nnctatggtcctgtacacttg 127  Q
      |||||||| ||||||||||    
T  332037 gtctatggtcttgtacacttg 332057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 54
Target Start/End: Original strand, 1293258 - 1293301
Alignment:
Q  12 aggagcagttcttttcagacgctttaagctt-cctttttgttga 54  Q
    |||||||||| |||||||||||||||||||| ||||||||||||    
T  1293258 aggagcagtttttttcagacgctttaagcttccctttttgttga 1293301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 101
Target Start/End: Original strand, 5826254 - 5826349
Alignment:
Q  8 cttcaggagcagttcttttcagacgctttaagctt-cctttttgttgattcattttctctcta-ttgttctttcagaacctttttaagatgtcaaa 101  Q
    |||||||||||||| | |||| | ||||||||||| |||||||||||||  |||| |||| || |||||||| ||  ||| |||||||||||||||    
T  5826254 cttcaggagcagttttcttcatatgctttaagcttccctttttgttgatgtatttgctctttatttgttcttccaagaccattttaagatgtcaaa 5826349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 77
Target Start/End: Complemental strand, 19710855 - 19710800
Alignment:
Q  23 ttttcagacgctttaagcttc-ctttttgttgattcattttctctctattgttctt 77  Q
    |||||||| |||||| ||||| |||||||||||||||||| |||||| ||||||||    
T  19710855 ttttcagatgctttaggcttctctttttgttgattcatttgctctcttttgttctt 19710800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 55
Target Start/End: Complemental strand, 32264594 - 32264546
Alignment:
Q  8 cttcaggagcagttcttttcagacgctttaagctt-cctttttgttgat 55  Q
    |||||||||||||| | |||||||||||||| ||| |||||||||||||    
T  32264594 cttcaggagcagttttcttcagacgctttaaacttccctttttgttgat 32264546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 82; Significance: 8e-39; HSPs: 45)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 22317891 - 22318017
Alignment:
Q  1 actttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaa 100  Q
    |||||| |||||||||||||||| ||||||||||||||||||||||||||||||||| ||| |||||||||||||||  |||||||||||||||||||||    
T  22317891 actttgacttcaggagcagttctcttcagacgctttaagcttcctttttgttgattcctttgctctctattgttcttctagaacctttttaagatgtcaa 22317990  T
Q  101 annnnnnnctatggtcctgtacacttg 127  Q
    |       |||||||||||||||||||    
T  22317991 atttttgtctatggtcctgtacacttg 22318017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 20151871 - 20151771
Alignment:
Q  1 actttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaa 100  Q
    ||||||||||||||||||||| | |||||||||||||||||||||||||||| |||  ||| ||||||||||||||| ||  ||||||||||||||||||    
T  20151871 actttgtcttcaggagcagttttcttcagacgctttaagcttcctttttgttaattactttgctctctattgttcttccaagacctttttaagatgtcaa 20151772  T
Q  101 a 101  Q
    |    
T  20151771 a 20151771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 23235286 - 23235412
Alignment:
Q  1 actttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaa 100  Q
    |||||| ||||| ||||| |||| |||||||||||||||||| ||||||||||||||| || |||||| ||||||||  ||||||| |||||||||||||    
T  23235286 actttgacttcaagagcacttctcttcagacgctttaagcttactttttgttgattcaattgctctcttttgttcttctagaacctatttaagatgtcaa 23235385  T
Q  101 annnnnnnctatggtcctgtacacttg 127  Q
    |       |||||||||||||||||||    
T  23235386 atttttgtctatggtcctgtacacttg 23235412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 3 - 86
Target Start/End: Original strand, 25829385 - 25829468
Alignment:
Q  3 tttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 86  Q
    |||||||||||||||| |||| ||||||||||||||||||||||||||||||||| ||| |||||| |||||||| ||||||||    
T  25829385 tttgtcttcaggagcacttctcttcagacgctttaagcttcctttttgttgattcctttgctctcttttgttcttccagaacct 25829468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 8 - 127
Target Start/End: Original strand, 38781666 - 38781785
Alignment:
Q  8 cttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaannnnnn 107  Q
    ||||||||||  |||| |||||| |||| |||||||||||||||||||||| || |||||| |||||||| |||||||||||||||||| ||||          
T  38781666 cttcaggagcgcttctcttcagatgcttcaagcttcctttttgttgattcaattgctctcttttgttcttccagaacctttttaagatgacaaatttttg 38781765  T
Q  108 nctatggtcctgtacacttg 127  Q
     |||||||||||||||||||    
T  38781766 tctatggtcctgtacacttg 38781785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 28711534 - 28711433
Alignment:
Q  1 actttgtcttcaggagcagttcttttcagacgctttaagcttcct-ttttgttgattcattttctctctattgttctttcagaacctttttaagatgtca 99  Q
    ||||||||||||||||||||| | |||| |||||||||||||||| |||||||||||| ||| |||| |||||||||| ||  |||||||||||||||||    
T  28711534 actttgtcttcaggagcagttttcttcaaacgctttaagcttccttttttgttgattcctttgctctttattgttcttccaagacctttttaagatgtca 28711435  T
Q  100 aa 101  Q
    ||    
T  28711434 aa 28711433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 2 - 101
Target Start/End: Complemental strand, 28701032 - 28700932
Alignment:
Q  2 ctttgtcttcaggagcagttcttttcagacgctttaagcttcc-tttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaa 100  Q
    |||| ||||||||||||||| | |||||||||||||||||||| ||||||||||||| ||| |||| |||||||||| ||  ||||||||||||||||||    
T  28701032 ctttatcttcaggagcagttttcttcagacgctttaagcttccctttttgttgattcctttgctctttattgttcttccaagacctttttaagatgtcaa 28700933  T
Q  101 a 101  Q
    |    
T  28700932 a 28700932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 8 - 127
Target Start/End: Complemental strand, 13963824 - 13963705
Alignment:
Q  8 cttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaannnnnn 107  Q
    ||||||||||| ||||||||||| | || || | |||||||||||||||| ||| |||||| |||||||| |||||||| ||||||||||||||          
T  13963824 cttcaggagcacttcttttcagatgtttcaaacgtcctttttgttgattcctttgctctcttttgttcttccagaacctatttaagatgtcaaatttttg 13963725  T
Q  108 nctatggtcctgtacacttg 127  Q
     |||||||| ||||||||||    
T  13963724 tctatggtcatgtacacttg 13963705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 30667268 - 30667353
Alignment:
Q  1 actttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 86  Q
    |||||| |||| |||||| |||| |||||| |||| |||||||||||||||||||||| || ||||||||||||||| ||||||||    
T  30667268 actttgacttcgggagcacttctcttcagatgcttcaagcttcctttttgttgattcaattgctctctattgttcttccagaacct 30667353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 8 - 101
Target Start/End: Complemental strand, 1586855 - 1586760
Alignment:
Q  8 cttcaggagcagttcttttcagacgctttaagctt-cctttttgttgattcattttctctcta-ttgttctttcagaacctttttaagatgtcaaa 101  Q
    |||||||||||||| |||||||||||||||||||| |||||||||||||  |||| |||| || |||||||| ||  |||||||||||||||||||    
T  1586855 cttcaggagcagtttttttcagacgctttaagcttccctttttgttgatgtatttgctctttatttgttcttccaagacctttttaagatgtcaaa 1586760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 3 - 86
Target Start/End: Original strand, 22260686 - 22260769
Alignment:
Q  3 tttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 86  Q
    |||||||||||||||| |||| ||||||||| |||| |||||||||||||||||| ||| |||||| ||||||||  |||||||    
T  22260686 tttgtcttcaggagcacttctcttcagacgccttaaacttcctttttgttgattcctttgctctcttttgttcttctagaacct 22260769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 8 - 101
Target Start/End: Complemental strand, 9015185 - 9015092
Alignment:
Q  8 cttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaa 101  Q
    ||||| ||||| |||| |||||| |||| |||||||| |||||||||||| ||| |||||| |||||||| |||||||| |||||||| |||||    
T  9015185 cttcaagagcacttctcttcagatgcttcaagcttccattttgttgattcctttgctctcttttgttcttccagaacctatttaagatttcaaa 9015092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 31800707 - 31800606
Alignment:
Q  1 actttgtcttcaggagcagttcttttcagacgctttaagctt-cctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtca 99  Q
    ||||| ||||||||||||||| | |||||||||||||||||| ||||||||||||||| |||  ||| |||||||||| ||  || ||||||| ||||||    
T  31800707 actttatcttcaggagcagttttcttcagacgctttaagcttccctttttgttgattcctttgttctttattgttcttccaagacatttttaatatgtca 31800608  T
Q  100 aa 101  Q
    ||    
T  31800607 aa 31800606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 3 - 86
Target Start/End: Complemental strand, 20568568 - 20568485
Alignment:
Q  3 tttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 86  Q
    |||||||||||||||| || | ||||||||  ||||||||||||||||||||||| ||| |||||| ||||||||  |||||||    
T  20568568 tttgtcttcaggagcacttatcttcagacgtcttaagcttcctttttgttgattcctttactctcttttgttcttcaagaacct 20568485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 6573959 - 6573861
Alignment:
Q  1 actttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtca 99  Q
    ||||||||||||| |||| || | |||||| | ||||||||||||||||||| |||| ||| ||| ||||||||||| ||  | |||||||||||||||    
T  6573959 actttgtcttcagaagcatttttcttcagatgttttaagcttcctttttgttaattcctttgctccctattgttcttccaagatctttttaagatgtca 6573861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 7 - 57
Target Start/End: Complemental strand, 30557103 - 30557053
Alignment:
Q  7 tcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattc 57  Q
    ||||||||||||||| | |||||||||||||||||||||||||||||||||    
T  30557103 tcttcaggagcagttttcttcagacgctttaagcttcctttttgttgattc 30557053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 12 - 101
Target Start/End: Complemental strand, 45086945 - 45086855
Alignment:
Q  12 aggagcagttcttttcagacgctttaagcttcc-tttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaa 101  Q
    |||||||||| | |||||||||||||||||||| |||||||||| |  ||| |||| |||||||||| || |||||||||||||| |||||    
T  45086945 aggagcagttttcttcagacgctttaagcttccctttttgttgacttctttgctctttattgttcttccaaaacctttttaagatatcaaa 45086855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 30621466 - 30621592
Alignment:
Q  1 actttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaa 100  Q
    |||||| ||||  ||||| |||| || ||| |||| |||||||||||||||||||||  || ||||||||||||||| ||||||||  | ||||| ||||    
T  30621466 actttgacttcgagagcacttctctttagatgcttgaagcttcctttttgttgattccattgctctctattgttcttccagaacctaataaagatatcaa 30621565  T
Q  101 annnnnnnctatggtcctgtacacttg 127  Q
    |       |||||||||||||||||||    
T  30621566 atttatgtctatggtcctgtacacttg 30621592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 30624087 - 30624213
Alignment:
Q  1 actttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaa 100  Q
    |||||| ||||  ||||| |||| || ||| |||| |||||||||||||||||||||  || ||||||||||||||| ||||||||  | ||||| ||||    
T  30624087 actttgacttcgagagcacttctctttagatgcttgaagcttcctttttgttgattccattgctctctattgttcttccagaacctaataaagatatcaa 30624186  T
Q  101 annnnnnnctatggtcctgtacacttg 127  Q
    |       |||||||||||||||||||    
T  30624187 atttatgtctatggtcctgtacacttg 30624213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 8 - 100
Target Start/End: Complemental strand, 31327770 - 31327677
Alignment:
Q  8 cttcaggagcagttcttttcagacgctttaagcttc-ctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaa 100  Q
    |||||||||||||| | ||||| ||| ||||||||| |||||||||||| | ||| |||| |||||||||| ||| ||||||||||||| ||||    
T  31327770 cttcaggagcagttttcttcaggcgcgttaagcttctctttttgttgatgcctttgctctttattgttcttccaggacctttttaagatatcaa 31327677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 8 - 100
Target Start/End: Complemental strand, 31334491 - 31334398
Alignment:
Q  8 cttcaggagcagttcttttcagacgctttaagcttc-ctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaa 100  Q
    |||||||||||||| | ||||| ||| ||||||||| |||||||||||| | ||| |||| |||||||||| ||| ||||||||||||| ||||    
T  31334491 cttcaggagcagttttcttcaggcgcgttaagcttctctttttgttgatgcctttgctctttattgttcttccaggacctttttaagatatcaa 31334398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 2 - 101
Target Start/End: Complemental strand, 34321725 - 34321624
Alignment:
Q  2 ctttgtcttcaggagcagttcttttcagacgctttaagctt-cctttttgttgattcattttctctcta-ttgttctttcagaacctttttaagatgtca 99  Q
    |||| ||||||||||||||| | |||||||||||||| ||| |||||||||||||  |||| |||| || |||||||| ||  |||||||||||||||||    
T  34321725 ctttatcttcaggagcagttttcttcagacgctttaaacttccctttttgttgatgtatttgctctttatttgttcttccaagacctttttaagatgtca 34321626  T
Q  100 aa 101  Q
    ||    
T  34321625 aa 34321624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 124
Target Start/End: Complemental strand, 25037087 - 25036966
Alignment:
Q  3 tttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaan 102  Q
    |||| ||||| ||||| |||| |||||| |||||||||||| ||||||||||||| ||| |||||| || ||||| ||||||||  | ||||| |||||     
T  25037087 tttgacttcatgagcacttctcttcagatgctttaagcttcgtttttgttgattcctttgctctctttttttcttccagaacctaataaagatatcaaat 25036988  T
Q  103 nnnnnnctatggtcctgtacac 124  Q
          ||||||||||||||||    
T  25036987 ttctgtctatggtcctgtacac 25036966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 124
Target Start/End: Complemental strand, 25041194 - 25041073
Alignment:
Q  3 tttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaan 102  Q
    |||| ||||| ||||| |||| |||||| |||||||||||| ||||||||||||| ||| |||||| || ||||| ||||||||  | ||||| |||||     
T  25041194 tttgacttcatgagcacttctcttcagatgctttaagcttcgtttttgttgattcctttgctctctttttttcttccagaacctaataaagatatcaaat 25041095  T
Q  103 nnnnnnctatggtcctgtacac 124  Q
          ||||||||||||||||    
T  25041094 ttctgtctatggtcctgtacac 25041073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 7 - 66
Target Start/End: Original strand, 6392921 - 6392980
Alignment:
Q  7 tcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctct 66  Q
    ||||||||||||||| | ||||||||||||||||||||||| ||||||||| ||| ||||    
T  6392921 tcttcaggagcagttttcttcagacgctttaagcttcctttgtgttgattcctttgctct 6392980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 8 - 86
Target Start/End: Complemental strand, 18376751 - 18376673
Alignment:
Q  8 cttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 86  Q
    ||||||||||| || | |||||| |||| ||||||||||||||||||||| ||  |||||| |||||||| ||||||||    
T  18376751 cttcaggagcatttttcttcagatgcttcaagcttcctttttgttgattccttagctctcttttgttcttccagaacct 18376673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 86
Target Start/End: Original strand, 38631237 - 38631318
Alignment:
Q  5 tgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 86  Q
    |||||||||||||| |||| |||||| |||| ||||||| ||||||||||||  ||| |||||| ||||| || ||||||||    
T  38631237 tgtcttcaggagcacttctcttcagatgcttcaagcttcatttttgttgatttctttgctctcttttgtttttccagaacct 38631318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 2 - 101
Target Start/End: Original strand, 22802754 - 22802854
Alignment:
Q  2 ctttgtcttcaggagcagttcttttcagacgctttaagctt-cctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaa 100  Q
    |||| |||||| ||||| || | |||||||||||||||||| ||||||||||||||   || |||| |||||||||| ||  ||||||||||||| ||||    
T  22802754 ctttatcttcatgagcaattttcttcagacgctttaagcttccctttttgttgatttcattactctttattgttcttccaagacctttttaagatatcaa 22802853  T
Q  101 a 101  Q
    |    
T  22802854 a 22802854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 8 - 86
Target Start/End: Original strand, 19540684 - 19540762
Alignment:
Q  8 cttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 86  Q
    |||||||| || || | |||||||||||||||||| |||||||||||||| ||  |||||| |||||||| || |||||    
T  19540684 cttcaggaacacttttcttcagacgctttaagctttctttttgttgattccttagctctcttttgttcttccaaaacct 19540762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 8 - 86
Target Start/End: Complemental strand, 22187933 - 22187855
Alignment:
Q  8 cttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 86  Q
    ||||||||||| |||| |||||| |||| |||||||||||||| |||||| ||| |||| | |||||||| || |||||    
T  22187933 cttcaggagcacttctcttcagatgcttcaagcttcctttttgctgattcctttgctctattttgttcttccataacct 22187855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 8 - 86
Target Start/End: Complemental strand, 24850480 - 24850402
Alignment:
Q  8 cttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 86  Q
    ||||||||||| || | |||||| |||| ||||||||||||||||||||| ||  |||||| ||||||||  |||||||    
T  24850480 cttcaggagcacttttcttcagatgcttcaagcttcctttttgttgattccttagctctcttttgttcttcgagaacct 24850402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 3 - 57
Target Start/End: Complemental strand, 28140454 - 28140400
Alignment:
Q  3 tttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattc 57  Q
    |||| ||||||||||| |||| |||||||| | ||||||||||||||||||||||    
T  28140454 tttgacttcaggagcacttctcttcagacgttctaagcttcctttttgttgattc 28140400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 57
Target Start/End: Complemental strand, 10009582 - 10009533
Alignment:
Q  8 cttcaggagcagttcttttcagacgctttaagcttcctttttgttgattc 57  Q
    ||||||||||| |||| |||||| |||| |||||||||||||||||||||    
T  10009582 cttcaggagcacttctcttcagatgcttcaagcttcctttttgttgattc 10009533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 77
Target Start/End: Original strand, 24377356 - 24377425
Alignment:
Q  8 cttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctt 77  Q
    ||||||||||| |||| |||||| ||||  ||||||||||||||||||||  || |||||| ||||||||    
T  24377356 cttcaggagcacttctcttcagatgcttctagcttcctttttgttgattctattgctctcttttgttctt 24377425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 55
Target Start/End: Complemental strand, 22776127 - 22776079
Alignment:
Q  8 cttcaggagcagttcttttcagacgctttaagctt-cctttttgttgat 55  Q
    |||||||||||||| | |||||||||||||||||| |||||||||||||    
T  22776127 cttcaggagcagttttcttcagacgctttaagcttccctttttgttgat 22776079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 55
Target Start/End: Complemental strand, 22781505 - 22781457
Alignment:
Q  8 cttcaggagcagttcttttcagacgctttaagctt-cctttttgttgat 55  Q
    |||||||||||||| | |||||||||||||||||| |||||||||||||    
T  22781505 cttcaggagcagttttcttcagacgctttaagcttccctttttgttgat 22781457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 127
Target Start/End: Complemental strand, 31967865 - 31967744
Alignment:
Q  8 cttcaggagcagttcttttcagacgctttaagctt-cctttttgttgattcattttctctcta-ttgttctttcagaacctttttaagatgtcaaannnn 105  Q
    |||||| ||||||| | |||| ||||||||||||| |||||||||||||  |||| |||| || |||||||||||  |||  ||||||||||||||        
T  31967865 cttcagaagcagttttcttcaaacgctttaagcttccctttttgttgatgtatttgctctttatttgttctttcaagaccaatttaagatgtcaaatttt 31967766  T
Q  106 nnnctatggtcctgtacacttg 127  Q
       |||| ||||||||||||||    
T  31967765 tgtctatagtcctgtacacttg 31967744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 57
Target Start/End: Original strand, 40782757 - 40782805
Alignment:
Q  9 ttcaggagcagttcttttcagacgctttaagcttcctttttgttgattc 57  Q
    |||||||||| |||| |||||| |||| |||||||||||||||||||||    
T  40782757 ttcaggagcacttctcttcagatgcttcaagcttcctttttgttgattc 40782805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 55
Target Start/End: Original strand, 44840709 - 44840757
Alignment:
Q  8 cttcaggagcagttcttttcagacgctttaagctt-cctttttgttgat 55  Q
    |||||||||||||| | |||||||||||||||||| |||||||||||||    
T  44840709 cttcaggagcagttttcttcagacgctttaagcttccctttttgttgat 44840757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 97
Target Start/End: Original strand, 3277274 - 3277365
Alignment:
Q  8 cttcaggagcagttcttttcagacgctttaagctt-cctttttgttgattcattttctctcta-ttgttctttcagaacctttttaagatgt 97  Q
    |||||||||||||| | |||| | ||||||||||| |||||||||||||  |||| |||| || |||||||| ||  |||||||||||||||    
T  3277274 cttcaggagcagttttcttcataagctttaagcttccctttttgttgatgtatttgctctttatttgttcttccaagacctttttaagatgt 3277365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 8 - 57
Target Start/End: Complemental strand, 23184161 - 23184112
Alignment:
Q  8 cttcaggagcagttcttttcagacgctttaagcttcctttttgttgattc 57  Q
    ||||||||||| || | |||||| |||| |||||||||||||||||||||    
T  23184161 cttcaggagcacttttcttcagatgcttcaagcttcctttttgttgattc 23184112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 8 - 57
Target Start/End: Complemental strand, 23595418 - 23595369
Alignment:
Q  8 cttcaggagcagttcttttcagacgctttaagcttcctttttgttgattc 57  Q
    ||||||||||| || | |||||| |||| |||||||||||||||||||||    
T  23595418 cttcaggagcacttttcttcagatgcttcaagcttcctttttgttgattc 23595369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 8 - 57
Target Start/End: Complemental strand, 39037471 - 39037422
Alignment:
Q  8 cttcaggagcagttcttttcagacgctttaagcttcctttttgttgattc 57  Q
    |||||| |||| |||| |||||| |||| |||||||||||||||||||||    
T  39037471 cttcagtagcacttctcttcagatgcttcaagcttcctttttgttgattc 39037422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 56
Target Start/End: Complemental strand, 22454805 - 22454757
Alignment:
Q  8 cttcaggagcagttcttttcagacgctttaagcttcctttttgttgatt 56  Q
    ||||||||||| || | |||||| |||| ||||||||||||||||||||    
T  22454805 cttcaggagcacttttcttcagatgcttcaagcttcctttttgttgatt 22454757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 55
Target Start/End: Original strand, 40332366 - 40332414
Alignment:
Q  8 cttcaggagcagttcttttcagacgctttaagctt-cctttttgttgat 55  Q
    ||||| |||||||| | |||||||||||||||||| |||||||||||||    
T  40332366 cttcaagagcagttttcttcagacgctttaagcttccctttttgttgat 40332414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 81; Significance: 3e-38; HSPs: 44)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 21933178 - 21933278
Alignment:
Q  1 actttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaa 100  Q
    |||||| |||||||||||||||| ||||||||||||||||||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||    
T  21933178 actttgacttcaggagcagttctcttcagacgctttaagcttcctttttgttgattcctttgctctctattgttcttccagaacctttttaagatgtcaa 21933277  T
Q  101 a 101  Q
    |    
T  21933278 a 21933278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 18120998 - 18120872
Alignment:
Q  1 actttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaa 100  Q
    ||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||| |||||| |||||||| |||||||| || | ||| ||||    
T  18120998 actttgtcttcaggagcagttctcttcaaacgctttaagcttcctttttgttgattcatttgctctcttttgttcttccagaacctattgatgatctcaa 18120899  T
Q  101 annnnnnnctatggtcctgtacacttg 127  Q
    |       |||||||||||||||||||    
T  18120898 atttttgtctatggtcctgtacacttg 18120872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 3 - 101
Target Start/End: Complemental strand, 30421314 - 30421216
Alignment:
Q  3 tttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaa 101  Q
    ||||||||||||||||||| | |||||||||||||||||||||||||||| |||| ||| ||||||||||||||| ||  |||||||||||||||||||    
T  30421314 tttgtcttcaggagcagttttgttcagacgctttaagcttcctttttgttaattcctttgctctctattgttcttccaagacctttttaagatgtcaaa 30421216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 17441697 - 17441597
Alignment:
Q  1 actttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaa 100  Q
    |||||| ||||||||||| |||| |||||||||||||||||||||||| |||||||| ||| |||||| |||||||| |||||||| |||||||||||||    
T  17441697 actttgacttcaggagcacttctcttcagacgctttaagcttccttttcgttgattcctttgctctcttttgttcttccagaacctatttaagatgtcaa 17441598  T
Q  101 a 101  Q
    |    
T  17441597 a 17441597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 8 - 101
Target Start/End: Original strand, 16189283 - 16189376
Alignment:
Q  8 cttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaa 101  Q
    ||||| ||||| |||| ||||||||||| ||||||||||||||||||||||||| |||||| |||||||| |||||||| ||||||||||||||    
T  16189283 cttcaagagcacttctcttcagacgcttcaagcttcctttttgttgattcatttgctctcttttgttcttccagaacctatttaagatgtcaaa 16189376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 20382270 - 20382144
Alignment:
Q  1 actttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaa 100  Q
    |||||| ||||||||||| |||| ||||||||||| |||||||||||||||||||||  || |||||| |||||||||||||||||  | ||||||||||    
T  20382270 actttgacttcaggagcacttctcttcagacgcttcaagcttcctttttgttgattccattactctcttttgttctttcagaacctaataaagatgtcaa 20382171  T
Q  101 annnnnnnctatggtcctgtacacttg 127  Q
    |       |||||||||||||||||||    
T  20382170 atttttgtctatggtcctgtacacttg 20382144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 23185116 - 23185016
Alignment:
Q  1 actttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaa 100  Q
    |||||||||||| |||||  | | ||||||||||||||||||||||||||||  ||||||| ||||||||||||||| || || ||||||||||||||||    
T  23185116 actttgtcttcaagagcaaatttcttcagacgctttaagcttcctttttgttagttcatttgctctctattgttcttccaaaatctttttaagatgtcaa 23185017  T
Q  101 a 101  Q
    |    
T  23185016 a 23185016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 8 - 127
Target Start/End: Original strand, 22745754 - 22745873
Alignment:
Q  8 cttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaannnnnn 107  Q
    ||||| ||||| |||| ||||||| ||||||||||||||||||||||||| ||| |||| | |||||||| |||||||| ||||||||||||||          
T  22745754 cttcatgagcacttctcttcagacactttaagcttcctttttgttgattcctttgctcttttttgttcttccagaacctatttaagatgtcaaatttttg 22745853  T
Q  108 nctatggtcctgtacacttg 127  Q
     |||| ||||||||||||||    
T  22745854 tctatcgtcctgtacacttg 22745873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 20255442 - 20255357
Alignment:
Q  1 actttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 86  Q
    |||||| |||||||||||||||| |||||||||||||| |||||||||||||||||| ||| |||||| ||||| || ||||||||    
T  20255442 actttgacttcaggagcagttctcttcagacgctttaaacttcctttttgttgattcctttgctctcttttgttgttccagaacct 20255357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 25 - 100
Target Start/End: Original strand, 16207556 - 16207631
Alignment:
Q  25 ttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaa 100  Q
    |||||| |||| ||| ||||||||||||||||||||| |||||| |||||||| ||||||||||||||||||||||    
T  16207556 ttcagatgcttcaagattcctttttgttgattcatttgctctcttttgttcttccagaacctttttaagatgtcaa 16207631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 19156459 - 19156544
Alignment:
Q  1 actttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 86  Q
    |||||| ||||||||||| |||| ||||||||||||||||||||||||||||||| | ||| |||||| ||||||||  |||||||    
T  19156459 actttgacttcaggagcacttctcttcagacgctttaagcttcctttttgttgatccctttgctctcttttgttcttctagaacct 19156544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 2 - 101
Target Start/End: Original strand, 1237946 - 1238046
Alignment:
Q  2 ctttgtcttcaggagcagttcttttcagacgctttaagcttcc-tttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaa 100  Q
    |||| |||||| |||||||| | |||||| ||||||||||||| ||||||||||||| ||| |||| |||||||||| ||  ||||||||||||||||||    
T  1237946 ctttatcttcatgagcagttttcttcagatgctttaagcttccctttttgttgattcctttgctctttattgttcttccaagacctttttaagatgtcaa 1238045  T
Q  101 a 101  Q
    |    
T  1238046 a 1238046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 3 - 86
Target Start/End: Complemental strand, 16681176 - 16681095
Alignment:
Q  3 tttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 86  Q
    |||||||||||||||| |||| ||||||||||||||||||| ||||||||||||||||| || ||  |||||||| ||||||||    
T  16681176 tttgtcttcaggagcacttctcttcagacgctttaagcttcatttttgttgattcatttgctatc--ttgttcttccagaacct 16681095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 2 - 101
Target Start/End: Complemental strand, 45538328 - 45538228
Alignment:
Q  2 ctttgtcttcaggagcagttcttttcagacgctttaagctt-cctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaa 100  Q
    |||| ||||||||||||||| | |||||||||||||||||| ||||||||||||||  ||| |||| |||||||||| ||  ||||||||||| ||||||    
T  45538328 ctttatcttcaggagcagttttcttcagacgctttaagcttccctttttgttgatttctttgctctttattgttcttccaagacctttttaagttgtcaa 45538229  T
Q  101 a 101  Q
    |    
T  45538228 a 45538228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 2 - 100
Target Start/End: Original strand, 9320864 - 9320963
Alignment:
Q  2 ctttgtcttcaggagcagttcttttcagacgctttaagcttcc-tttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaa 100  Q
    |||| |||||||||| |||| | |||||||||||||| ||||| ||||||||||||| ||| |||| |||||||||| ||  ||||||||||||||||||    
T  9320864 ctttatcttcaggagtagttttcttcagacgctttaatcttccctttttgttgattcctttgctctttattgttcttccaagacctttttaagatgtcaa 9320963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 7 - 101
Target Start/End: Complemental strand, 24832923 - 24832828
Alignment:
Q  7 tcttcaggagcagttcttttcagacgctttaagctt-cctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaa 101  Q
    ||||||||||||||| | |||||||||||||||||| ||||||||||||||  ||| |||| |||||||||| ||  ||||||||||||| |||||    
T  24832923 tcttcaggagcagttttcttcagacgctttaagcttccctttttgttgatttctttgctctttattgttcttccaagacctttttaagatatcaaa 24832828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 8 - 101
Target Start/End: Complemental strand, 15335909 - 15335815
Alignment:
Q  8 cttcaggagcagttcttttcagacgctttaagcttcc-tttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaa 101  Q
    |||||||||||||| | ||||||| |||||||||||| ||||||||||||| ||| |||| |||||||||| ||  ||||||||||||| |||||    
T  15335909 cttcaggagcagttttcttcagacactttaagcttccctttttgttgattcctttgctctttattgttcttccaagacctttttaagatatcaaa 15335815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 8 - 101
Target Start/End: Complemental strand, 15424974 - 15424880
Alignment:
Q  8 cttcaggagcagttcttttcagacgctttaagcttcc-tttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaa 101  Q
    |||||||||||||| | ||||||| |||||||||||| ||||||||||||| ||| |||| |||||||||| ||  ||||||||||||| |||||    
T  15424974 cttcaggagcagttttcttcagacactttaagcttccctttttgttgattcctttgctctttattgttcttccaagacctttttaagatatcaaa 15424880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 8 - 101
Target Start/End: Complemental strand, 15516278 - 15516184
Alignment:
Q  8 cttcaggagcagttcttttcagacgctttaagcttcc-tttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaa 101  Q
    |||||||||||||| | ||||||| |||||||||||| ||||||||||||| ||| |||| |||||||||| ||  ||||||||||||| |||||    
T  15516278 cttcaggagcagttttcttcagacactttaagcttccctttttgttgattcctttgctctttattgttcttccaagacctttttaagatatcaaa 15516184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 2 - 127
Target Start/End: Complemental strand, 40845245 - 40845118
Alignment:
Q  2 ctttgtcttcaggagcagttcttttcagacgctttaagctt-cctttttgttgattcattttctctcta-ttgttctttcagaacctttttaagatgtca 99  Q
    |||| ||||||||||||||| | |||||||||||||||||| |||||||||||||  |||| |||| || |||||||| ||  |||||||||||||||||    
T  40845245 ctttatcttcaggagcagttttcttcagacgctttaagcttccctttttgttgatgtatttgctctttatttgttcttccaagacctttttaagatgtca 40845146  T
Q  100 aannnnnnnctatggtcctgtacacttg 127  Q
    ||       |||| ||||||||||||||    
T  40845145 aatttttgtctatagtcctgtacacttg 40845118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 82
Target Start/End: Complemental strand, 17525601 - 17525523
Alignment:
Q  4 ttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcaga 82  Q
    ||||||||||||||| ||||||||||| |||| || |||| ||||||||||||  ||| |||||| |||||||||||||    
T  17525601 ttgtcttcaggagcacttcttttcagatgcttcaatcttcatttttgttgatttctttgctctcttttgttctttcaga 17525523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 3 - 77
Target Start/End: Original strand, 29693596 - 29693670
Alignment:
Q  3 tttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctt 77  Q
    |||||||||| ||||| |||| |||||| |||||||||||||||||||||||||| | | |||||| ||||||||    
T  29693596 tttgtcttcaagagcacttctcttcagatgctttaagcttcctttttgttgattcctctgctctcttttgttctt 29693670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 17267748 - 17267833
Alignment:
Q  1 actttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 86  Q
    |||||| |||||||  || |||| |||||| |||| ||||||||||||||||||||| ||| |||||| |||||||| ||||||||    
T  17267748 actttgacttcaggcacacttctcttcagatgcttcaagcttcctttttgttgattcctttgctctcttttgttcttccagaacct 17267833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 17797698 - 17797800
Alignment:
Q  1 actttgtcttcaggagcagttcttttcagacgctttaagcttcc---tttttgttgattcattttctctctattgttctttcagaacctttttaagatgt 97  Q
    ||||||||||||||||||||| |||||||| |||||||||||||   ||||||||||||| ||| || | |||| ||||| ||  | |||||||||||||    
T  17797698 actttgtcttcaggagcagtt-ttttcagatgctttaagcttccttttttttgttgattcctttgctatttattattcttccaagatctttttaagatgt 17797796  T
Q  98 caaa 101  Q
    ||||    
T  17797797 caaa 17797800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 2 - 101
Target Start/End: Original strand, 36105504 - 36105605
Alignment:
Q  2 ctttgtcttcaggagcagttcttttcagacgctttaagctt-cctttttgttgattcattttctctcta-ttgttctttcagaacctttttaagatgtca 99  Q
    |||| ||||||||||||||| | ||||||| |||||||||| |||||||||||||  |||| |||| || |||||||| ||  |||||||||||||||||    
T  36105504 ctttatcttcaggagcagttttcttcagacactttaagcttccctttttgttgatgtatttgctctttatttgttcttccaatacctttttaagatgtca 36105603  T
Q  100 aa 101  Q
    ||    
T  36105604 aa 36105605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 39693812 - 39693897
Alignment:
Q  1 actttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 86  Q
    |||||| |||||| |||| |||| ||| || |||||||||||| ||||||||||||||||| |||||| | |||||| ||||||||    
T  39693812 actttgacttcagaagcacttctcttcggatgctttaagcttcttttttgttgattcatttgctctctttcgttcttccagaacct 39693897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 127
Target Start/End: Original strand, 6408001 - 6408122
Alignment:
Q  8 cttcaggagcagttcttttcagacgctttaagctt-cctttttgttgattcattttctctcta-ttgttctttcagaacctttttaagatgtcaaannnn 105  Q
    |||||||||||||| | |||| ||||||||||||| |||||||||||||  |||| |||| || |||||||| ||  |||||||||||||||||||        
T  6408001 cttcaggagcagttttcttcaaacgctttaagcttccctttttgttgatgtatttgctctttatttgttcttccaagacctttttaagatgtcaaatttt 6408100  T
Q  106 nnnctatggtcctgtacacttg 127  Q
       |||| ||||||||||||||    
T  6408101 tgtctatagtcctgtacacttg 6408122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 127
Target Start/End: Complemental strand, 14989325 - 14989205
Alignment:
Q  8 cttcaggagcagttcttttcagacgctttaagcttcc-tttttgttgattcattttctctcta-ttgttctttcagaacctttttaagatgtcaaannnn 105  Q
    |||||||||||||| | |||||||||||||||||||| |||||||||||  |||| |||| || ||||||||||| |  |||||||||||||||||        
T  14989325 cttcaggagcagttttcttcagacgctttaagcttccatttttgttgatgtatttgctctttacttgttctttca-agactttttaagatgtcaaatttt 14989227  T
Q  106 nnnctatggtcctgtacacttg 127  Q
       |||| ||||||||||||||    
T  14989226 tgtctatagtcctgtacacttg 14989205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 17914736 - 17914821
Alignment:
Q  1 actttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 86  Q
    |||||| ||| ||||||| |||| |||||| |||| ||||||||||| ||||||||| ||| |||||| || ||||| ||||||||    
T  17914736 actttgactttaggagcacttctcttcagatgcttcaagcttcctttctgttgattcctttgctctcttttattcttccagaacct 17914821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 8 - 100
Target Start/End: Original strand, 19943520 - 19943613
Alignment:
Q  8 cttcaggagcagttcttttcagacgctttaagcttcctttttg-ttgattcattttctctctattgttctttcagaacctttttaagatgtcaa 100  Q
    ||||||||||| |||| |||||| |||| ||||||| |||||| |||||||  || |||||| ||||||||  ||||||| |||||||||||||    
T  19943520 cttcaggagcacttctcttcagatgcttcaagcttcttttttggttgattccattactctcttttgttcttctagaacctatttaagatgtcaa 19943613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 8 - 127
Target Start/End: Complemental strand, 18151530 - 18151410
Alignment:
Q  8 cttcaggagcagttcttttcagacgctttaagcttcc-tttttgttgattcattttctctcta-ttgttctttcagaacctttttaagatgtcaaannnn 105  Q
    |||||||||||||| | |||||||||||||||||||| |||||||||||  |||| |||| || ||||||||||| |  ||||||||| |||||||        
T  18151530 cttcaggagcagttttcttcagacgctttaagcttccatttttgttgatgtatttgctctttacttgttctttca-agactttttaagttgtcaaatttt 18151432  T
Q  106 nnnctatggtcctgtacacttg 127  Q
       |||| ||||||||||||||    
T  18151431 tgtctatagtcctgtacacttg 18151410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 14 - 101
Target Start/End: Original strand, 19927335 - 19927423
Alignment:
Q  14 gagcagttcttttcagacgctttaagcttcc-tttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaa 101  Q
    |||||||| | || ||||||||||||||||| ||||||||| ||| ||| |||| |||||||||| ||  ||||||||||||| |||||    
T  19927335 gagcagttttctttagacgctttaagcttccctttttgttggttcctttgctctttattgttcttccaagacctttttaagatatcaaa 19927423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 101
Target Start/End: Complemental strand, 13430501 - 13430406
Alignment:
Q  8 cttcaggagcagttcttttcagacgctttaagctt-cctttttgttgattcattttctctcta-ttgttctttcagaacctttttaagatgtcaaa 101  Q
    |||||||||||||| | |||||||||||||||||| |||||||||||||  | || |||| || |||||||||||  |||  ||||||||||||||    
T  13430501 cttcaggagcagttttcttcagacgctttaagcttccctttttgttgatgtacttgctctttatttgttctttcaagaccaatttaagatgtcaaa 13430406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 28 - 127
Target Start/End: Complemental strand, 602582 - 602483
Alignment:
Q  28 agacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaannnnnnnctatggtcctgtacacttg 127  Q
    |||||||| || |||||||||||||||||| ||  |||||| |||||||| ||||||||  | ||||| |||||       |||||||||||||||||||    
T  602582 agacgcttcaaacttcctttttgttgattccttagctctcttttgttcttccagaacctaataaagatatcaaatttttgtctatggtcctgtacacttg 602483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 8 - 127
Target Start/End: Original strand, 24646621 - 24646740
Alignment:
Q  8 cttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaannnnnn 107  Q
    ||||||||||| |||| |  ||| |||| |||||||||||||||||||||  ||  | ||| |||||||| || ||||| ||||||||||||||          
T  24646621 cttcaggagcacttctctctagatgcttcaagcttcctttttgttgattccattggtatcttttgttcttccaaaacctatttaagatgtcaaatttttt 24646720  T
Q  108 nctatggtcctgtacacttg 127  Q
     ||||||||||||| |||||    
T  24646721 tctatggtcctgtatacttg 24646740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 3 - 57
Target Start/End: Original strand, 33083135 - 33083189
Alignment:
Q  3 tttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattc 57  Q
    |||| ||||| ||||| |||| ||||||||||||||||||| |||||||||||||    
T  33083135 tttgacttcaagagcacttctcttcagacgctttaagcttcttttttgttgattc 33083189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 101
Target Start/End: Complemental strand, 3598198 - 3598102
Alignment:
Q  7 tcttcaggagcagttcttttcagacgctttaagctt-cctttttgttgattcattttctctctattgttctttc-agaacctttttaagatgtcaaa 101  Q
    ||||||||||||||| | ||||||||||||||| || ||| ||||||||||| |||  ||| |||||||||| | ||| | ||||||| ||||||||    
T  3598198 tcttcaggagcagttttcttcagacgctttaagtttccctctttgttgattcctttgttctgtattgttcttccaagatcttttttaaaatgtcaaa 3598102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 86
Target Start/End: Original strand, 17702005 - 17702088
Alignment:
Q  3 tttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 86  Q
    |||| |||||| |||| |||| |||||| |||| |||||||||||||||||||||  |  |||||| ||||| || ||||||||    
T  17702005 tttgacttcagaagcacttctcttcagatgcttcaagcttcctttttgttgattccataactctcttttgttattccagaacct 17702088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 127
Target Start/End: Complemental strand, 18321058 - 18320939
Alignment:
Q  8 cttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaannnnnn 107  Q
    ||||||||||| |||| |||||| |||| ||||||| |||||||||||||  |  || ||| |||||||| |||||| |  | ||||| |||||          
T  18321058 cttcaggagcacttctcttcagatgcttcaagcttcttttttgttgattccatagctatcttttgttcttccagaacgtaataaagatatcaaatttttg 18320959  T
Q  108 nctatggtcctgtacacttg 127  Q
     |||||||||||||||||||    
T  18320958 tctatggtcctgtacacttg 18320939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 97
Target Start/End: Original strand, 2811103 - 2811194
Alignment:
Q  5 tgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgt 97  Q
    |||||||| || || |||| |||||| ||||||||||||| |||||||||||  ||| |||| | || ||| |||| ||||| ||||||||||    
T  2811103 tgtcttcatgaacacttctcttcagatgctttaagcttcc-ttttgttgatttctttgctcttttttattcattcataacctatttaagatgt 2811194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 18680076 - 18680131
Alignment:
Q  1 actttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattc 57  Q
    |||||| ||||||||||| | || |||||| |||| |||||||||||||||||||||    
T  18680076 actttgacttcaggagcact-ctcttcagatgcttaaagcttcctttttgttgattc 18680131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 18719244 - 18719299
Alignment:
Q  1 actttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattc 57  Q
    |||||| ||||||||||| | || |||||| |||| |||||||||||||||||||||    
T  18719244 actttgacttcaggagcact-ctcttcagatgcttaaagcttcctttttgttgattc 18719299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 55
Target Start/End: Original strand, 24551588 - 24551636
Alignment:
Q  7 tcttcaggagcagttcttttcagacgctttaagcttcctttttgttgat 55  Q
    |||||||||||||||   |||| |||||||||| |||||||||||||||    
T  24551588 tcttcaggagcagtttgcttcaaacgctttaagtttcctttttgttgat 24551636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 55
Target Start/End: Original strand, 45292894 - 45292942
Alignment:
Q  8 cttcaggagcagttcttttcagacgctttaagctt-cctttttgttgat 55  Q
    ||||||| |||||| | |||||||||||||||||| |||||||||||||    
T  45292894 cttcaggtgcagttttcttcagacgctttaagcttccctttttgttgat 45292942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 81; Significance: 3e-38; HSPs: 42)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 32544553 - 32544653
Alignment:
Q  1 actttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaa 100  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| ||||||||||||||| || |||||||||||||||||||    
T  32544553 actttgtcttcaggagcagttctcttcagacgctttaagcttcctttttgttgattcctttgctctctattgttcttccataacctttttaagatgtcaa 32544652  T
Q  101 a 101  Q
    |    
T  32544653 a 32544653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 18435859 - 18435985
Alignment:
Q  1 actttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaa 100  Q
    ||||||||||||||||||||||| |||||| |||||||||||||||||||||||||| ||||||||||||||||||| ||  || ||||||||||| |||    
T  18435859 actttgtcttcaggagcagttctcttcagatgctttaagcttcctttttgttgattccttttctctctattgttcttccaatacatttttaagatgacaa 18435958  T
Q  101 annnnnnnctatggtcctgtacacttg 127  Q
    |       |||||||||||||||||||    
T  18435959 atttttgtctatggtcctgtacacttg 18435985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 26972074 - 26971948
Alignment:
Q  1 actttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaa 100  Q
    |||||| |||||| ||||||||| ||||||||||||||| ||||||||||||||||| ||| ||||| ||||||||| ||||||||||||||||||||||    
T  26972074 actttgacttcagaagcagttctcttcagacgctttaagattcctttttgttgattcctttgctctccattgttcttccagaacctttttaagatgtcaa 26971975  T
Q  101 annnnnnnctatggtcctgtacacttg 127  Q
    |        ||||||||||||||||||    
T  26971974 atttttgtttatggtcctgtacacttg 26971948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 21235382 - 21235482
Alignment:
Q  1 actttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaa 100  Q
    ||||||||||||||||||||| | ||||||||||||||||||||||||||| ||||| ||| ||||||||||||||| ||  ||||||||||||||||||    
T  21235382 actttgtcttcaggagcagttttcttcagacgctttaagcttcctttttgtagattcctttgctctctattgttcttccaagacctttttaagatgtcaa 21235481  T
Q  101 a 101  Q
    |    
T  21235482 a 21235482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 22802410 - 22802510
Alignment:
Q  1 actttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaa 100  Q
    |||||||||||||||||||||  ||||||||| |||||||||||||||||||||||| ||| ||||||||||||||| ||  ||||||||||||||||||    
T  22802410 actttgtcttcaggagcagtttatttcagacgttttaagcttcctttttgttgattcctttcctctctattgttcttccaagacctttttaagatgtcaa 22802509  T
Q  101 a 101  Q
    |    
T  22802510 a 22802510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 16265030 - 16264930
Alignment:
Q  1 actttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaa 100  Q
    ||||||||||||||||||||| | |||||| |||||| | ||||||||||||||||| ||| ||||||||||||||||||  ||||||||||||||||||    
T  16265030 actttgtcttcaggagcagttttcttcagatgctttaggattcctttttgttgattcctttgctctctattgttctttcaagacctttttaagatgtcaa 16264931  T
Q  101 a 101  Q
    |    
T  16264930 a 16264930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 15954972 - 15955073
Alignment:
Q  1 actttgtcttcaggagcagttcttttcagacgctttaagctt-cctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtca 99  Q
    |||||||||| |||||||||| |||||||||||||||||||| ||||||||||||||| ||| |||| |||||||||| ||  |||||||||||||||||    
T  15954972 actttgtcttaaggagcagtttttttcagacgctttaagcttccctttttgttgattcctttgctctttattgttcttccaagacctttttaagatgtca 15955071  T
Q  100 aa 101  Q
    ||    
T  15955072 aa 15955073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 8 - 126
Target Start/End: Original strand, 19689008 - 19689126
Alignment:
Q  8 cttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaannnnnn 107  Q
    |||||||||||  ||| ||||||||||| || |||||||||||||||||||||| |||||| |||||||| |||||||| ||||||||||||||          
T  19689008 cttcaggagcacatctcttcagacgcttcaaacttcctttttgttgattcatttgctctcttttgttcttccagaacctatttaagatgtcaaatttttg 19689107  T
Q  108 nctatggtcctgtacactt 126  Q
     ||||||||||||||||||    
T  19689108 tctatggtcctgtacactt 19689126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 20730584 - 20730484
Alignment:
Q  1 actttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaa 100  Q
    |||||||||||| |||||||| | ||||||||||| ||||||||||||||||||||  ||| ||||||||||||||| ||  ||||||||||||||||||    
T  20730584 actttgtcttcatgagcagttttcttcagacgcttaaagcttcctttttgttgatttctttgctctctattgttcttccaagacctttttaagatgtcaa 20730485  T
Q  101 a 101  Q
    |    
T  20730484 a 20730484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 3 - 127
Target Start/End: Original strand, 21625385 - 21625509
Alignment:
Q  3 tttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaan 102  Q
    ||||||||||| |||  |||| |||||| |||| ||||||||| |||||||||||||||||||||| ||||||||  ||||||||| ||||||||||||     
T  21625385 tttgtcttcagaagcgcttctcttcagatgcttcaagcttcctatttgttgattcattttctctcttttgttcttcgagaacctttctaagatgtcaaat 21625484  T
Q  103 nnnnnnctatggtcctgtacacttg 127  Q
          |||||||||||||||||||    
T  21625485 ttttgtctatggtcctgtacacttg 21625509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 3 - 101
Target Start/End: Complemental strand, 34451546 - 34451448
Alignment:
Q  3 tttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaa 101  Q
    |||||||||||||||  |||| |||||| |||| |||||||||||||| |||||| ||| |||||| |||||||| |||||||||||||||||||||||    
T  34451546 tttgtcttcaggagcgcttctcttcagatgcttcaagcttcctttttgctgattcctttgctctcttttgttcttccagaacctttttaagatgtcaaa 34451448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 9718128 - 9718213
Alignment:
Q  1 actttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 86  Q
    |||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| ||| |||||| ||||||||  |||||||    
T  9718128 actttgtcttcaggagtagttctcttcagacgctttaagcttcctttttgttgattcctttgctctcttttgttcttctagaacct 9718213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 3 - 127
Target Start/End: Complemental strand, 15531485 - 15531361
Alignment:
Q  3 tttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaan 102  Q
    ||||||| |||||||  |||| |||||| ||||||||||| |||||||||||||||||| |||| | ||||| || |||||| ||||||||||||||||     
T  15531485 tttgtctacaggagcgcttctcttcagatgctttaagctttctttttgttgattcatttgctcttttttgttattccagaacttttttaagatgtcaaat 15531386  T
Q  103 nnnnnnctatggtcctgtacacttg 127  Q
          |||||||||||||||||||    
T  15531385 ttttatctatggtcctgtacacttg 15531361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 12 - 123
Target Start/End: Original strand, 13435828 - 13435939
Alignment:
Q  12 aggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaannnnnnncta 111  Q
    ||||||| |||| |||||| |||| |||||||||||||||||||||  || |||||| ||||||||||||||||| ||||||||||||||       |||    
T  13435828 aggagcacttctcttcagatgcttcaagcttcctttttgttgattccattgctctcttttgttctttcagaacctatttaagatgtcaaatttttgtcta 13435927  T
Q  112 tggtcctgtaca 123  Q
    ||||||||||||    
T  13435928 tggtcctgtaca 13435939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 7 - 100
Target Start/End: Complemental strand, 20487759 - 20487666
Alignment:
Q  7 tcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaa 100  Q
    ||||||||||||||| | ||||||||||||||||||| ||||||||||||| ||| || | |||||||||| ||  ||||||||||||||||||    
T  20487759 tcttcaggagcagttttcttcagacgctttaagcttcttttttgttgattcctttgctttttattgttcttccaagacctttttaagatgtcaa 20487666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 2 - 101
Target Start/End: Complemental strand, 19832864 - 19832764
Alignment:
Q  2 ctttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctcta-ttgttctttcagaacctttttaagatgtcaa 100  Q
    |||| ||||||||||||||| | |||||||||||||||||||||||||||||||  |||| |||| || |||||||| ||  ||||||||||||||||||    
T  19832864 ctttatcttcaggagcagttttcttcagacgctttaagcttcctttttgttgatgtatttgctctttatttgttcttccaagacctttttaagatgtcaa 19832765  T
Q  101 a 101  Q
    |    
T  19832764 a 19832764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 29918286 - 29918388
Alignment:
Q  1 actttgtcttcaggagcagttcttttcagacgctttaagcttcctt--tttgttgattcattttctctctattgttctttcagaacctttttaagatgtc 98  Q
    ||||||||||||| ||||||| | |||| |||||||||||||||||  ||||||||||| ||| ||||||||| ||||| ||  ||||||||||||||||    
T  29918286 actttgtcttcagaagcagttttcttcatacgctttaagcttccttgatttgttgattcctttgctctctattattcttccaagacctttttaagatgtc 29918385  T
Q  99 aaa 101  Q
    |||    
T  29918386 aaa 29918388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 8 - 86
Target Start/End: Original strand, 13602447 - 13602525
Alignment:
Q  8 cttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 86  Q
    ||||||||||| |||| |||| ||| |||||||||||||||||||||||| |||||||||| |||||||| ||||||||    
T  13602447 cttcaggagcacttctcttcaaacggtttaagcttcctttttgttgattccttttctctcttttgttcttccagaacct 13602525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 7 - 96
Target Start/End: Complemental strand, 139225 - 139136
Alignment:
Q  7 tcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatg 96  Q
    ||||||||||||||| | |||||||||||||||||| |||||||||||||| ||| |||| ||||||||||  |  ||||||||||||||    
T  139225 tcttcaggagcagttttcttcagacgctttaagctttctttttgttgattcctttgctctttattgttcttctaagacctttttaagatg 139136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 7 - 96
Target Start/End: Complemental strand, 147246 - 147157
Alignment:
Q  7 tcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatg 96  Q
    ||||||||||||||| | |||||||||||||||||| |||||||||||||| ||| |||| ||||||||||  |  ||||||||||||||    
T  147246 tcttcaggagcagttttcttcagacgctttaagctttctttttgttgattcctttgctctttattgttcttctaagacctttttaagatg 147157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 19086435 - 19086520
Alignment:
Q  1 actttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 86  Q
    |||||| ||||||||||| |||| ||||||||||| ||||||||||||||||||||| ||  |||||| |||||||| ||||||||    
T  19086435 actttgacttcaggagcacttctcttcagacgcttcaagcttcctttttgttgattccttagctctcttttgttcttccagaacct 19086520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 2 - 97
Target Start/End: Original strand, 17381716 - 17381812
Alignment:
Q  2 ctttgtcttcaggagcagttcttttcagacgctttaagctt-cctttttgttgattcattttctctctattgttctttcagaacctttttaagatgt 97  Q
    |||| ||||||||||||||| | |||||||||||||||||| ||||||||||||||| | | |||| |||||||||| ||  |||||||||||||||    
T  17381716 ctttatcttcaggagcagttttcttcagacgctttaagcttccctttttgttgattcctatgctctttattgttcttccaagacctttttaagatgt 17381812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 8 - 101
Target Start/End: Original strand, 16877506 - 16877600
Alignment:
Q  8 cttcaggagcagttcttttcagacgctttaagcttcc-tttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaa 101  Q
    |||||||||||||| | |||||||||||||||| ||| |||||||| |||| ||| |||| |||||||||| ||| ||||||||||||| |||||    
T  16877506 cttcaggagcagttttcttcagacgctttaagcctccctttttgttaattcctttgctctttattgttcttccaggacctttttaagatatcaaa 16877600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 2 - 127
Target Start/End: Original strand, 21618521 - 21618648
Alignment:
Q  2 ctttgtcttcaggagcagttcttttcagacgctttaagctt-cctttttgttgattcattttctctcta-ttgttctttcagaacctttttaagatgtca 99  Q
    |||| ||||||||||||||| | |||||||||||||||||| |||||||||||||  |||| |||| || |||||||| ||  |||||||||||||||||    
T  21618521 ctttatcttcaggagcagttttcttcagacgctttaagcttccctttttgttgatgtatttgctctttatttgttcttccaagacctttttaagatgtca 21618620  T
Q  100 aannnnnnnctatggtcctgtacacttg 127  Q
    ||       |||| ||||||||||||||    
T  21618621 aacttttgtctatagtcctgtacacttg 21618648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 19624247 - 19624332
Alignment:
Q  1 actttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 86  Q
    |||||| ||||||||||| |||| |||||| |||| ||||||||||||||||||||| ||  |||||| |||||||| ||||||||    
T  19624247 actttgacttcaggagcacttctcttcagatgcttcaagcttcctttttgttgattccttagctctcttttgttcttccagaacct 19624332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 24117113 - 24117198
Alignment:
Q  1 actttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 86  Q
    |||||| ||||||||||| |||| |||||| |||||||||||||||||||||||||| ||  |||||| |||||||| || |||||    
T  24117113 actttgacttcaggagcacttctcttcagatgctttaagcttcctttttgttgattccttagctctcttttgttcttccataacct 24117198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 8 - 101
Target Start/End: Original strand, 12349254 - 12349349
Alignment:
Q  8 cttcaggagcagttcttttcagacgctttaagctt-cctttttgttgattcattttctctcta-ttgttctttcagaacctttttaagatgtcaaa 101  Q
    |||||||||||||| | |||||||||||||||||| |||||||||||||  |||| |||| || |||||||| ||  |||||||||||||||||||    
T  12349254 cttcaggagcagttttcttcagacgctttaagcttccctttttgttgatgtatttgctctttatttgttcttccaagacctttttaagatgtcaaa 12349349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 8 - 101
Target Start/End: Original strand, 12423514 - 12423609
Alignment:
Q  8 cttcaggagcagttcttttcagacgctttaagcttc-ctttttgttgattcattttctctcta-ttgttctttcagaacctttttaagatgtcaaa 101  Q
    |||||||||||||| | ||||||||||||||||||| ||||||||||||  |||| |||| || |||||||| ||  |||||||||||||||||||    
T  12423514 cttcaggagcagttttcttcagacgctttaagcttcactttttgttgatgtatttgctctttatttgttcttccaagacctttttaagatgtcaaa 12423609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 8 - 101
Target Start/End: Complemental strand, 22058439 - 22058344
Alignment:
Q  8 cttcaggagcagttcttttcagacgctttaagctt-cctttttgttgattcattttctctcta-ttgttctttcagaacctttttaagatgtcaaa 101  Q
    ||||||||||| |||| |||||||||||||||||| |||||||||||||  |||| |||| || |||||||| ||  |||||||||||||||||||    
T  22058439 cttcaggagcaattctcttcagacgctttaagcttccctttttgttgatgtatttgctctttatttgttcttccaagacctttttaagatgtcaaa 22058344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 33351809 - 33351681
Alignment:
Q  1 actttgtcttcaggagcagttcttttcagacgctttaagctt-cctttttgttgattcattttctctcta-ttgttctttcagaacctttttaagatgtc 98  Q
    ||||||||||||||||||||| | |||||||||||||||||| |||||||||||||  | || ||||||| |||||||| ||  |||  |||||||||||    
T  33351809 actttgtcttcaggagcagttttcttcagacgctttaagcttccctttttgttgatgtacttgctctctatttgttcttccaagaccactttaagatgtc 33351710  T
Q  99 aaannnnnnnctatggtcctgtacacttg 127  Q
    |||       |||| ||||||||||||||    
T  33351709 aaatttttatctatagtcctgtacacttg 33351681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 3 - 77
Target Start/End: Complemental strand, 12715297 - 12715223
Alignment:
Q  3 tttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctt 77  Q
    |||||||||||||||| |||| |||||| |||| ||||||||||||||||||||  ||| |||||| ||||||||    
T  12715297 tttgtcttcaggagcacttctcttcagatgcttcaagcttcctttttgttgatttctttgctctcttttgttctt 12715223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 8 - 77
Target Start/End: Original strand, 18378545 - 18378614
Alignment:
Q  8 cttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctt 77  Q
    ||||||||||| |||| || ||||| |||||||||||||||||||||||| ||| |||||| ||||||||    
T  18378545 cttcaggagcacttctcttaagacgttttaagcttcctttttgttgattcctttactctcttttgttctt 18378614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 3 - 86
Target Start/End: Original strand, 15302458 - 15302541
Alignment:
Q  3 tttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 86  Q
    |||||||||||||||| |||| ||||||||| ||||| |||| |||||||||||| ||| |||||| || |||||  |||||||    
T  15302458 tttgtcttcaggagcacttctcttcagacgccttaagtttccattttgttgattcctttgctctctttttttcttctagaacct 15302541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 8 - 101
Target Start/End: Complemental strand, 14100330 - 14100237
Alignment:
Q  8 cttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaa 101  Q
    ||||||||| | |||| | |||| |||| |||||||||||||||||||||  || |||||| |||||||| |||||||| ||||| || |||||    
T  14100330 cttcaggagtacttctctccagatgcttcaagcttcctttttgttgattccattgctctcttttgttcttccagaacctatttaatatatcaaa 14100237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 101
Target Start/End: Original strand, 16336440 - 16336540
Alignment:
Q  2 ctttgtcttcaggagcagttcttttcagacgctttaagcttc-ctttttgttgattcattttctctcta-ttgttctttcagaacctttttaagatgtca 99  Q
    |||| ||||||||||||||| | ||||||||||||||||||| ||||||||||||  |||| |||| || |||||||| ||  ||| |||||||||||||    
T  16336440 ctttatcttcaggagcagttttcttcagacgctttaagcttcactttttgttgatgtatttgctctttatttgttcttccaagacc-ttttaagatgtca 16336538  T
Q  100 aa 101  Q
    ||    
T  16336539 aa 16336540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 10 - 86
Target Start/End: Original strand, 15987488 - 15987564
Alignment:
Q  10 tcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 86  Q
    ||||||||| || | |||||| |||| ||||||||||||||||||||| ||  |||||| ||||| |||||||||||    
T  15987488 tcaggagcacttttcttcagatgcttcaagcttcctttttgttgattccttagctctcttttgttttttcagaacct 15987564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 8 - 86
Target Start/End: Original strand, 25597754 - 25597832
Alignment:
Q  8 cttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 86  Q
    ||||||||||| |||| |||||| ||||| ||||||||||||||||||||  || |||||| || |||||  |||||||    
T  25597754 cttcaggagcacttctcttcagatgcttttagcttcctttttgttgattccattgctctcttttattcttctagaacct 25597832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 83
Target Start/End: Complemental strand, 19065882 - 19065805
Alignment:
Q  8 cttcaggagcagttcttttcagacgctttaagcttc-ctttttgttgattcattttctctcta-ttgttctttcagaa 83  Q
    |||||||||||||| | ||||||||||| ||||||| ||||||||||||  | ||||||| || ||||||||||||||    
T  19065882 cttcaggagcagttttcttcagacgcttgaagcttctctttttgttgatatactttctctttatttgttctttcagaa 19065805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 127
Target Start/End: Complemental strand, 20112567 - 20112452
Alignment:
Q  12 aggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaannnnnnncta 111  Q
    ||||||| |||| || ||| |||| |||||||||||||||||||||  |  | |||| |||||||| ||||||||  | ||||| |||||       |||    
T  20112567 aggagcacttctctttagatgcttcaagcttcctttttgttgattccatagccctctcttgttcttccagaacctaataaagatatcaaatttttgtcta 20112468  T
Q  112 tggtcctgtacacttg 127  Q
    ||||||||||||||||    
T  20112467 tggtcctgtacacttg 20112452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 77
Target Start/End: Complemental strand, 17608160 - 17608107
Alignment:
Q  25 ttcagacgctttaagcttc-ctttttgttgattcattttctctctattgttctt 77  Q
    |||||| |||||| ||||| |||||||||||||||||| |||||| ||||||||    
T  17608160 ttcagatgctttaggcttctctttttgttgattcatttgctctcttttgttctt 17608107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 86
Target Start/End: Original strand, 18383955 - 18384008
Alignment:
Q  33 ctttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 86  Q
    |||||| |||| ||||||||||||| ||| |||||| |||||||| ||||||||    
T  18383955 ctttaaacttcttttttgttgattcctttgctctcttttgttcttccagaacct 18384008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 8 - 57
Target Start/End: Original strand, 23284855 - 23284904
Alignment:
Q  8 cttcaggagcagttcttttcagacgctttaagcttcctttttgttgattc 57  Q
    ||||||||||| |||| |||||| | || |||||||||||||||||||||    
T  23284855 cttcaggagcacttctcttcagatgtttcaagcttcctttttgttgattc 23284904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 81; Significance: 3e-38; HSPs: 47)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 18121496 - 18121396
Alignment:
Q  1 actttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaa 100  Q
    ||||||||||||||||||||||| ||||||||||||||||||| ||||||||| ||||||| ||||||||||||||| ||||||||||||||||||||||    
T  18121496 actttgtcttcaggagcagttctcttcagacgctttaagcttcatttttgttgcttcatttgctctctattgttcttccagaacctttttaagatgtcaa 18121397  T
Q  101 a 101  Q
    |    
T  18121396 a 18121396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 47207994 - 47208094
Alignment:
Q  1 actttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaa 100  Q
    ||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||  ||||||||||||||||||    
T  47207994 actttgtcttcaggagcagttttcttcagacgctttaagcttcctttttgttgattcatttgctctctattgttcttccaatacctttttaagatgtcaa 47208093  T
Q  101 a 101  Q
    |    
T  47208094 a 47208094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 28582391 - 28582517
Alignment:
Q  1 actttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaa 100  Q
    ||||||||||||||||||||||| |||||||| |||||||||||||||||||||||  ||| ||||||||||||||| ||||||||||||||||| ||||    
T  28582391 actttgtcttcaggagcagttctcttcagacgttttaagcttcctttttgttgatttctttactctctattgttcttccagaacctttttaagatttcaa 28582490  T
Q  101 annnnnnnctatggtcctgtacacttg 127  Q
    |       |||||||| ||||||||||    
T  28582491 atttttgtctatggtcatgtacacttg 28582517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 2561458 - 2561564
Alignment:
Q  1 actttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgatt------cattttctctctattgttctttcagaacctttttaaga 94  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||      ||||| ||||||||||||||| ||||||||||||||||    
T  2561458 actttgtcttcaggagcagttctcttcagacgctttaagcttcctttttgttgattcatttgcatttgctctctattgttcttccagaacctttttaaga 2561557  T
Q  95 tgtcaaa 101  Q
    |||||||    
T  2561558 tgtcaaa 2561564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 3 - 97
Target Start/End: Complemental strand, 47405324 - 47405230
Alignment:
Q  3 tttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgt 97  Q
    ||||||||||||||||||| | ||||||||||||||||||||||||||||||||| ||| ||||||||||||||| ||  || ||||||||||||    
T  47405324 tttgtcttcaggagcagttttcttcagacgctttaagcttcctttttgttgattcctttgctctctattgttcttccaagacgtttttaagatgt 47405230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 7 - 101
Target Start/End: Original strand, 50300508 - 50300602
Alignment:
Q  7 tcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaa 101  Q
    |||||||||| |||| | ||||||||||||||||||||||||||||||||| ||| |||| |||||||||| || ||||||||||||||||||||    
T  50300508 tcttcaggagtagttttcttcagacgctttaagcttcctttttgttgattcctttgctctttattgttcttccaaaacctttttaagatgtcaaa 50300602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 31303673 - 31303799
Alignment:
Q  1 actttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaa 100  Q
    |||||| ||||||||||| |||| |||||| |||||||||||||||||||||||||| ||| |||||| |||||||| ||||| || |||||||||||||    
T  31303673 actttgacttcaggagcacttctcttcagatgctttaagcttcctttttgttgattcttttgctctcttttgttcttccagaaactatttaagatgtcaa 31303772  T
Q  101 annnnnnnctatggtcctgtacacttg 127  Q
    |       |||||||| ||||||||||    
T  31303773 atttttgtctatggtcatgtacacttg 31303799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 11223831 - 11223931
Alignment:
Q  1 actttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaa 100  Q
    ||||||||||||||||||||||| |||||| ||||||| |||||||||||||||||| ||| |||| |||| ||||| ||  ||||||||||||||||||    
T  11223831 actttgtcttcaggagcagttctcttcagatgctttaaacttcctttttgttgattcctttgctctttattattcttccaagacctttttaagatgtcaa 11223930  T
Q  101 a 101  Q
    |    
T  11223931 a 11223931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 5 - 101
Target Start/End: Original strand, 11869374 - 11869470
Alignment:
Q  5 tgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaa 101  Q
    ||||||||||||||||| | || |||||||||||||||||||||||||||||| ||| |||| |||||||||| ||  |||||||||||||||||||    
T  11869374 tgtcttcaggagcagttttctttagacgctttaagcttcctttttgttgattcctttgctctttattgttcttccaagacctttttaagatgtcaaa 11869470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 8 - 127
Target Start/End: Original strand, 52920696 - 52920815
Alignment:
Q  8 cttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaannnnnn 107  Q
    ||||||||||| |||| |||||| |||| ||||||||||||||||||||| ||  |||||| |||||||| |||||||||||||||||||||||          
T  52920696 cttcaggagcacttctcttcagatgcttcaagcttcctttttgttgattccttagctctcttttgttcttccagaacctttttaagatgtcaaatttttg 52920795  T
Q  108 nctatggtcctgtacacttg 127  Q
     ||||| |||||||||||||    
T  52920796 tctatgatcctgtacacttg 52920815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 8 - 97
Target Start/End: Complemental strand, 20627347 - 20627258
Alignment:
Q  8 cttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgt 97  Q
    |||||| ||||||| | ||||||||||||||||||||||||||||||||| ||| ||||||||||||||| ||  |||||||||||||||    
T  20627347 cttcagaagcagttttgttcagacgctttaagcttcctttttgttgattcctttgctctctattgttcttccaagacctttttaagatgt 20627258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 8 - 101
Target Start/End: Original strand, 40800117 - 40800210
Alignment:
Q  8 cttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaa 101  Q
    ||||||||||| || | ||||||||||||||||||||||||||||||||  ||| ||||||||| ||||| ||  |||||||||||||||||||    
T  40800117 cttcaggagcacttttcttcagacgctttaagcttcctttttgttgatttctttgctctctattattcttccaagacctttttaagatgtcaaa 40800210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 53056603 - 53056502
Alignment:
Q  1 actttgtcttcaggagcagttcttttcagacgctttaagctt-cctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtca 99  Q
    ||||||||||||||||||||| | |||| ||||||||||||| ||||||||||||||| ||| || | |||||||||| ||  |||||||||||||||||    
T  53056603 actttgtcttcaggagcagttttcttcaaacgctttaagcttccctttttgttgattcctttgctttttattgttcttccaagacctttttaagatgtca 53056504  T
Q  100 aa 101  Q
    ||    
T  53056503 aa 53056502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 8 - 127
Target Start/End: Original strand, 6091023 - 6091142
Alignment:
Q  8 cttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaannnnnn 107  Q
    ||||||||||| |||| |||||| |||| ||||||| ||||||||||||   || |||||| |||||||| |||||||| ||||||||||||||          
T  6091023 cttcaggagcacttctcttcagatgcttcaagcttcatttttgttgatttcattgctctcttttgttcttccagaacctatttaagatgtcaaatttttg 6091122  T
Q  108 nctatggtcctgtacacttg 127  Q
     |||||||||||||||||||    
T  6091123 tctatggtcctgtacacttg 6091142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 3 - 101
Target Start/End: Original strand, 14969600 - 14969698
Alignment:
Q  3 tttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaa 101  Q
    |||||||| ||||||  |||| |||||| |||| ||| ||||||||||||||||||||| |||||  |||||||| || ||||||||||||||||||||    
T  14969600 tttgtcttaaggagcgattctcttcagatgcttcaagattcctttttgttgattcatttgctctcgtttgttcttccataacctttttaagatgtcaaa 14969698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 2 - 98
Target Start/End: Original strand, 29855711 - 29855808
Alignment:
Q  2 ctttgtcttcaggagcagttcttttcagacgctttaagctt-cctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtc 98  Q
    |||| ||||||||||||||| | |||||||||||||||||| ||||||||||||||| |||  ||| |||||||||| ||  ||||||||||||||||    
T  29855711 ctttatcttcaggagcagttttcttcagacgctttaagcttccctttttgttgattcctttgttctttattgttcttccaagacctttttaagatgtc 29855808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 41495258 - 41495343
Alignment:
Q  1 actttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 86  Q
    |||||| |||||| |||| |||| |||||| |||||||||||||||||||||||||| ||| |||||| |||||||| ||||||||    
T  41495258 actttgacttcagaagcacttctcttcagatgctttaagcttcctttttgttgattcctttgctctcttttgttcttccagaacct 41495343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 7 - 127
Target Start/End: Complemental strand, 49553359 - 49553237
Alignment:
Q  7 tcttcaggagcagttctt-ttcagacgctttaagcttcctttttgttgattcattttctct-ctattgttctttcagaacctttttaagatgtcaaannn 104  Q
    |||||||||||| ||||  ||||||||||| ||||||||||||||||||||||||| |||| || |||||||| |||||| | ||||||||||||||       
T  49553359 tcttcaggagcacttctacttcagacgcttcaagcttcctttttgttgattcatttgctctcctgttgttcttccagaacttatttaagatgtcaaattt 49553260  T
Q  105 nnnnctatggtcctgtacacttg 127  Q
        |||||||| ||||||||||    
T  49553259 ttgtctatggtcatgtacacttg 49553237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 128 - 212
Target Start/End: Original strand, 25631909 - 25631993
Alignment:
Q  128 ttcattattttgcttttgatctctgcattatactcaacattgaatttgcagtgtagaatagtgaaggtggttgctacctgctggt 212  Q
    ||||| |||||||||||  ||||||||||||||||||||| ||||||||||||||||||| | | ||| ||||||||||| ||||    
T  25631909 ttcatgattttgcttttactctctgcattatactcaacatcgaatttgcagtgtagaataataacggtcgttgctacctggtggt 25631993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 8 - 86
Target Start/End: Complemental strand, 17238822 - 17238744
Alignment:
Q  8 cttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 86  Q
    ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||  |||||| ||||||||  |||||||    
T  17238822 cttcaggagcacttctcttcagacgctttaagcttcctttttgttgattccttagctctcttttgttcttaaagaacct 17238744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 20646439 - 20646524
Alignment:
Q  1 actttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 86  Q
    |||||| ||||||||||| |||| |||| ||||||||||||||| |||||||||||| ||| |||||| ||||||||  |||||||    
T  20646439 actttgacttcaggagcacttctcttcaaacgctttaagcttccattttgttgattcctttgctctcttttgttcttctagaacct 20646524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 7 - 100
Target Start/End: Original strand, 33583552 - 33583645
Alignment:
Q  7 tcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaa 100  Q
    ||||||||||||||| | |||| | | ||||| |||||||||||||||||| ||| |||| |||||||||| ||  ||||||||||||||||||    
T  33583552 tcttcaggagcagttttcttcatatgttttaaacttcctttttgttgattcctttgctctttattgttcttccaagacctttttaagatgtcaa 33583645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 7 - 100
Target Start/End: Original strand, 33598172 - 33598265
Alignment:
Q  7 tcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaa 100  Q
    ||||||||||||||| | |||| | | ||||| |||||||||||||||||| ||| |||| |||||||||| ||  ||||||||||||||||||    
T  33598172 tcttcaggagcagttttcttcatatgttttaaacttcctttttgttgattcctttgctctttattgttcttccaagacctttttaagatgtcaa 33598265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 3 - 86
Target Start/End: Original strand, 13948622 - 13948705
Alignment:
Q  3 tttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 86  Q
    |||| ||||| ||||| |||| |||||| |||||||||||||||||||||||||| ||| |||||| ||||| || ||||||||    
T  13948622 tttgacttcaagagcacttctcttcagatgctttaagcttcctttttgttgattcctttgctctcttttgtttttccagaacct 13948705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 7 - 101
Target Start/End: Complemental strand, 38177558 - 38177464
Alignment:
Q  7 tcttcaggagcagttctt-ttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaa 101  Q
    |||||||||||| ||||  |||||| | || ||||||||||||||||||||||||| |||| | || ||||| |||||||||||||||||||||||    
T  38177558 tcttcaggagcacttctcattcagatgtttcaagcttcctttttgttgattcatttgctct-tttttttcttccagaacctttttaagatgtcaaa 38177464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 8 - 127
Target Start/End: Complemental strand, 14392874 - 14392755
Alignment:
Q  8 cttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaannnnnn 107  Q
    ||||||||||| |||| |||||| |||| ||||||||||| ||||||||| ||  |||||| |||||||| ||||||||  | ||||| |||||          
T  14392874 cttcaggagcacttctcttcagatgcttcaagcttcctttctgttgattccttagctctcttttgttcttccagaacctaataaagatatcaaatttttg 14392775  T
Q  108 nctatggtcctgtacacttg 127  Q
     |||||||||||||||||||    
T  14392774 tctatggtcctgtacacttg 14392755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 8 - 86
Target Start/End: Complemental strand, 49642647 - 49642569
Alignment:
Q  8 cttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 86  Q
    ||||||||||| |||| |||||| |||| |||||||||||||||||||||  || |||||| |||||||| ||||||||    
T  49642647 cttcaggagcacttctcttcagatgcttcaagcttcctttttgttgattccattgctctcttttgttcttccagaacct 49642569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 2 - 101
Target Start/End: Original strand, 2785381 - 2785482
Alignment:
Q  2 ctttgtcttcaggagcagttcttttcagacgctttaagctt-cctttttgttgattcattttctctcta-ttgttctttcagaacctttttaagatgtca 99  Q
    |||| ||||||||| ||||| | |||||||||||||||||| |||||||||||||  |||| |||| || |||||||| ||  |||||||||||||||||    
T  2785381 ctttatcttcaggaacagttttcttcagacgctttaagcttccctttttgttgatgtatttgctctttatttgttcttccaagacctttttaagatgtca 2785480  T
Q  100 aa 101  Q
    ||    
T  2785481 aa 2785482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 2 - 101
Target Start/End: Original strand, 5216272 - 5216373
Alignment:
Q  2 ctttgtcttcaggagcagttcttttcagacgctttaagc-ttcctttttgttgattcattttctctcta-ttgttctttcagaacctttttaagatgtca 99  Q
    |||| ||||||||||||||| | |||||| ||||||||| |||||||||||||||  |||| |||| || |||||||| ||  |||||||||||||||||    
T  5216272 ctttatcttcaggagcagttttcttcagaagctttaagctttcctttttgttgatgtatttgctctttatttgttcttccaagacctttttaagatgtca 5216371  T
Q  100 aa 101  Q
    ||    
T  5216372 aa 5216373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 15903483 - 15903568
Alignment:
Q  1 actttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 86  Q
    |||||| ||| ||||||| |||| |||||| |||| |||||||||||||||||||||  || |||||| |||||||| ||||||||    
T  15903483 actttgacttaaggagcacttctcttcagatgcttcaagcttcctttttgttgattccattgctctcttttgttcttccagaacct 15903568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 101
Target Start/End: Original strand, 14955743 - 14955843
Alignment:
Q  2 ctttgtcttcaggagcagttcttttcagacgctttaagctt-cctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaa 100  Q
    |||| ||| ||||||||||| | |||||||||||||||||| |||||||||| |||  ||| |||| |||||||||| ||  ||||||||||||| ||||    
T  14955743 ctttatctgcaggagcagttttcttcagacgctttaagcttccctttttgttaatttctttgctctttattgttcttccaagacctttttaagatatcaa 14955842  T
Q  101 a 101  Q
    |    
T  14955843 a 14955843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 86
Target Start/End: Original strand, 37467587 - 37467671
Alignment:
Q  2 ctttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 86  Q
    ||||| ||||||||||| || | |||||| |||| |||||||||||||||||||||  ||  ||||| |||||||||||||||||    
T  37467587 ctttgacttcaggagcacttatcttcagatgcttcaagcttcctttttgttgattccattgttctcttttgttctttcagaacct 37467671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 2 - 101
Target Start/End: Complemental strand, 24775375 - 24775273
Alignment:
Q  2 ctttgtcttcaggagcagttcttttcagacgctttaagcttcc-tttttgttgattcattttctct--ctattgttctttcagaacctttttaagatgtc 98  Q
    |||| |||||||||||| || | |||| ||||||||||||||| ||||||||||||| ||| ||||  || |||||||| ||| ||||||||||||| ||    
T  24775375 ctttatcttcaggagcatttttcttcaaacgctttaagcttccatttttgttgattcctttgctcttacttttgttcttccagtacctttttaagatatc 24775276  T
Q  99 aaa 101  Q
    |||    
T  24775275 aaa 24775273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 8 - 101
Target Start/End: Complemental strand, 12726131 - 12726038
Alignment:
Q  8 cttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaa 101  Q
    ||||||||||| |||| || |||  ||| ||||||||||||| ||||||| ||   ||||| |||||||| |||||||| ||||||||||||||    
T  12726131 cttcaggagcaattctctttagatccttcaagcttcctttttattgattctttagatctcttttgttcttccagaacctatttaagatgtcaaa 12726038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 47
Target Start/End: Complemental strand, 16658519 - 16658475
Alignment:
Q  3 tttgtcttcaggagcagttcttttcagacgctttaagcttccttt 47  Q
    |||||||||||||||| |||| |||||||||||||||||||||||    
T  16658519 tttgtcttcaggagcacttctcttcagacgctttaagcttccttt 16658475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 101
Target Start/End: Original strand, 40851252 - 40851347
Alignment:
Q  8 cttcaggagcagttcttttcagacgctttaagctt-cctttttgttgattcattttctctcta-ttgttctttcagaacctttttaagatgtcaaa 101  Q
    |||||||||||||| | |||||||||||||||||| |||||||||||||  | || |||| || |||||||||||  |||  ||||||||||||||    
T  40851252 cttcaggagcagttttcttcagacgctttaagcttccctttttgttgatgtacttgctctttatttgttctttcaagaccaatttaagatgtcaaa 40851347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 8 - 77
Target Start/End: Original strand, 22141034 - 22141104
Alignment:
Q  8 cttcaggagcagttcttttcagacgctttaagctt-cctttttgttgattcattttctctctattgttctt 77  Q
    |||||||||||||| | ||||||| |||||||||| ||||||||||||||| ||| ||||  |||||||||    
T  22141034 cttcaggagcagttttcttcagacactttaagcttccctttttgttgattcctttgctcttaattgttctt 22141104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 12962976 - 12962891
Alignment:
Q  1 actttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 86  Q
    |||||| |||||  |||| |||| ||||||||||| ||||||||||||||||||||| ||    |||| |||||||| ||||||||    
T  12962976 actttgacttcaatagcacttctcttcagacgcttcaagcttcctttttgttgattccttagtcctcttttgttcttccagaacct 12962891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 55
Target Start/End: Original strand, 2028576 - 2028624
Alignment:
Q  8 cttcaggagcagttcttttcagacgctttaagctt-cctttttgttgat 55  Q
    |||||||||||||| | |||||||||||||||||| |||||||||||||    
T  2028576 cttcaggagcagttttcttcagacgctttaagcttccctttttgttgat 2028624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 37 - 89
Target Start/End: Original strand, 13824354 - 13824406
Alignment:
Q  37 aagcttcctttttgttgattcattttctctctattgttctttcagaacctttt 89  Q
    |||||||||||||||||||||  || |||||| |||||||| |||||||||||    
T  13824354 aagcttcctttttgttgattccattgctctcttttgttcttccagaacctttt 13824406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 55
Target Start/End: Original strand, 21606325 - 21606373
Alignment:
Q  8 cttcaggagcagttcttttcagacgctttaagctt-cctttttgttgat 55  Q
    |||||||||||||| | |||||||||||||||||| |||||||||||||    
T  21606325 cttcaggagcagttttcttcagacgctttaagcttccctttttgttgat 21606373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 101
Target Start/End: Complemental strand, 21605514 - 21605417
Alignment:
Q  8 cttcaggagcagttcttttcagacgctttaagcttcc---tttttgttgattcattttctctcta-ttgttctttcagaacctttttaagatgtcaaa 101  Q
    |||||||||||||| | |||||||||||||||||| |   |||||||||||  |||| |||| || |||||| | ||  |||||||||||||||||||    
T  21605514 cttcaggagcagttttcttcagacgctttaagctttcctttttttgttgatgtatttgctctttatttgttcatccaagacctttttaagatgtcaaa 21605417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 101
Target Start/End: Complemental strand, 21636530 - 21636433
Alignment:
Q  8 cttcaggagcagttcttttcagacgctttaagcttcc---tttttgttgattcattttctctctat-tgttctttcagaacctttttaagatgtcaaa 101  Q
    ||||| |||||||| | ||||||||||||||||||||   |||||||||||  |||| |||| ||| |||||||  |  |||||||||||||||||||    
T  21636530 cttcacgagcagttttcttcagacgctttaagcttccctttttttgttgatgtatttgctctttatatgttcttctaagacctttttaagatgtcaaa 21636433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 86
Target Start/End: Complemental strand, 22803969 - 22803891
Alignment:
Q  8 cttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 86  Q
    ||||||||||| |||| |||| | | || |||||||||||||||||||||  || |||||| ||||||||  |||||||    
T  22803969 cttcaggagcacttctcttcaaatgtttcaagcttcctttttgttgattccattgctctcttttgttcttctagaacct 22803891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 97
Target Start/End: Complemental strand, 46349672 - 46349606
Alignment:
Q  32 gctttaagcttcc-tttttgttgattcattttctctctattgttctttcagaacctttttaagatgt 97  Q
    ||||||||||||| ||||||||||||| ||| |||| |||||||||| ||  ||||||||| |||||    
T  46349672 gctttaagcttccctttttgttgattcctttgctctttattgttcttccaagacctttttaggatgt 46349606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 101
Target Start/End: Complemental strand, 49666265 - 49666171
Alignment:
Q  9 ttcaggagcagttcttttcagacgctttaagctt-cctttttgttgattcattttctctcta-ttgttctttcagaacctttttaagatgtcaaa 101  Q
    |||| |||||||| | |||||||||||||||||| |||||||||||||  | || |||| || |||||||| ||  ||| |||||||||||||||    
T  49666265 ttcaagagcagttttcttcagacgctttaagcttccctttttgttgatgtaattgctctttatttgttcttccaagaccattttaagatgtcaaa 49666171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 55
Target Start/End: Complemental strand, 46796244 - 46796196
Alignment:
Q  8 cttcaggagcagttcttttcagacgctttaagctt-cctttttgttgat 55  Q
    |||||||||||||| | ||||||| |||||||||| |||||||||||||    
T  46796244 cttcaggagcagttttcttcagacactttaagcttccctttttgttgat 46796196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 78; Significance: 2e-36; HSPs: 38)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 32785748 - 32785622
Alignment:
Q  1 actttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaa 100  Q
    |||||| |||||||||||||| | ||||||||||||||||||||||||||||||||||||| || |||||||||||| ||||||||||||||||||||||    
T  32785748 actttgccttcaggagcagttttcttcagacgctttaagcttcctttttgttgattcatttgctttctattgttcttccagaacctttttaagatgtcaa 32785649  T
Q  101 annnnnnnctatggtcctgtacacttg 127  Q
    |       ||||||||||||| |||||    
T  32785648 atttttgtctatggtcctgtatacttg 32785622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 3 - 127
Target Start/End: Complemental strand, 22599975 - 22599851
Alignment:
Q  3 tttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaan 102  Q
    |||||||||||||||  |||| |||||| |||| ||||||||||||||||||||||||| |||||| |||||||| || ||||||||||||||||||||     
T  22599975 tttgtcttcaggagcgcttctcttcagatgcttcaagcttcctttttgttgattcatttgctctcttttgttcttccaaaacctttttaagatgtcaaat 22599876  T
Q  103 nnnnnnctatggtcctgtacacttg 127  Q
          |||||||||||||||||||    
T  22599875 ttttgtctatggtcctgtacacttg 22599851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 3 - 127
Target Start/End: Original strand, 36134460 - 36134584
Alignment:
Q  3 tttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaan 102  Q
    |||||||||||||||  |||| |||||| |||| ||||||||||||||||||||| ||| |||||| |||||||| |||||||||||||||||||||||     
T  36134460 tttgtcttcaggagcgcttctcttcagatgcttcaagcttcctttttgttgattcctttgctctcttttgttcttccagaacctttttaagatgtcaaat 36134559  T
Q  103 nnnnnnctatggtcctgtacacttg 127  Q
          |||||||||||||||||||    
T  36134560 ttttgtctatggtcctgtacacttg 36134584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 8 - 127
Target Start/End: Original strand, 22154165 - 22154284
Alignment:
Q  8 cttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaannnnnn 107  Q
    ||||||||||| |||| ||||||||||| ||||||| ||||||||||||||||| |||||| |||||||| |||||||| ||||||||||||||          
T  22154165 cttcaggagcacttctcttcagacgcttcaagcttcatttttgttgattcatttgctctcttttgttcttccagaacctatttaagatgtcaaatttttg 22154264  T
Q  108 nctatggtcctgtacacttg 127  Q
     |||||||| ||||||||||    
T  22154265 tctatggtcatgtacacttg 22154284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 1900617 - 1900702
Alignment:
Q  1 actttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 86  Q
    ||||||||||||||||||||||| |||||||| |||||||||||||||||||||||| ||| |||||| |||||||| ||||||||    
T  1900617 actttgtcttcaggagcagttctcttcagacgttttaagcttcctttttgttgattcctttgctctcttttgttcttccagaacct 1900702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 5 - 127
Target Start/End: Complemental strand, 16235103 - 16234981
Alignment:
Q  5 tgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaannn 104  Q
    |||||||||||||| ||||||||||| |||| |||||||||||||||||||||  || |||||| |||||||| |||||||||||||| ||| ||||       
T  16235103 tgtcttcaggagcacttcttttcagatgcttcaagcttcctttttgttgattccattgctctcttttgttcttccagaacctttttaatatgacaaattt 16235004  T
Q  105 nnnnctatggtcctgtacacttg 127  Q
        |||||||||||||||||||    
T  16235003 ttgtctatggtcctgtacacttg 16234981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 22427154 - 22427028
Alignment:
Q  1 actttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaa 100  Q
    |||| |||||| ||||||||| | ||||||| |||||||||| |||||||||||||| ||| ||||||||||||||||||  ||||||||||||||||||    
T  22427154 acttggtcttcgggagcagttttcttcagacactttaagctttctttttgttgattcctttgctctctattgttctttcaagacctttttaagatgtcaa 22427055  T
Q  101 annnnnnnctatggtcctgtacacttg 127  Q
    |       | |||||||||||||||||    
T  22427054 atttttgtcaatggtcctgtacacttg 22427028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 3 - 101
Target Start/End: Original strand, 29216069 - 29216167
Alignment:
Q  3 tttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaa 101  Q
    ||||||||||||| ||||| | ||||||||||||||||||||||||||||||||| |||  |||||||||||||| ||  ||||||||| |||||||||    
T  29216069 tttgtcttcaggaacagttttcttcagacgctttaagcttcctttttgttgattcttttgatctctattgttcttccaagacctttttaggatgtcaaa 29216167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 2 - 101
Target Start/End: Original strand, 2834975 - 2835075
Alignment:
Q  2 ctttgtcttcaggagcagttcttttcagacgctttaagcttcc-tttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaa 100  Q
    ||||||||||||||||| || | |||| ||||||||||||||| ||||||||||||| ||| |||| |||||||||| || |||||||||||||||||||    
T  2834975 ctttgtcttcaggagcaattttcttcaaacgctttaagcttccctttttgttgattcctttgctctttattgttcttccaaaacctttttaagatgtcaa 2835074  T
Q  101 a 101  Q
    |    
T  2835075 a 2835075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 2 - 101
Target Start/End: Complemental strand, 25448328 - 25448228
Alignment:
Q  2 ctttgtcttcaggagcagttcttttcagacgctttaagcttcc-tttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaa 100  Q
    |||| ||||||||||||||| | |||||||||||||||||||| ||||||||||||| ||| ||||||||||||||| ||  ||||||||||||| ||||    
T  25448328 ctttatcttcaggagcagttttcttcagacgctttaagcttccctttttgttgattcctttgctctctattgttcttccaagacctttttaagatatcaa 25448229  T
Q  101 a 101  Q
    |    
T  25448228 a 25448228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 3 - 86
Target Start/End: Original strand, 38282869 - 38282952
Alignment:
Q  3 tttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 86  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||| |||| | ||||||||  |||||||    
T  38282869 tttgtcttcaggagcagttctcttcagacgctttaagcttcctttttattgattcatttgctctattttgttcttctagaacct 38282952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 8 - 86
Target Start/End: Original strand, 1578124 - 1578202
Alignment:
Q  8 cttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 86  Q
    ||||||||||| |||| |||||| |||||||||||||||||||||||||| ||| |||||| |||||||||||||||||    
T  1578124 cttcaggagcacttctcttcagatgctttaagcttcctttttgttgattcctttgctctcttttgttctttcagaacct 1578202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 3 - 101
Target Start/End: Original strand, 2268814 - 2268912
Alignment:
Q  3 tttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaa 101  Q
    |||||||||||||||  |||| |||||| |||  || ||||||||||| |||||||||| |||||| |||||||| |||||||||||||||||||||||    
T  2268814 tttgtcttcaggagcgcttctcttcagatgctacaaacttcctttttgatgattcatttgctctcttttgttcttccagaacctttttaagatgtcaaa 2268912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 7 - 100
Target Start/End: Complemental strand, 2327198 - 2327104
Alignment:
Q  7 tcttcaggagcagttcttttcagacgctttaagcttcc-tttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaa 100  Q
    ||||||||||||||| | |||||||||||||||||||| ||||||||||||| ||| |||| |||||||||| ||  ||||||||||||||||||    
T  2327198 tcttcaggagcagttttcttcagacgctttaagcttccctttttgttgattcctttgctctttattgttcttccaagacctttttaagatgtcaa 2327104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 5 - 101
Target Start/End: Original strand, 2267344 - 2267440
Alignment:
Q  5 tgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaa 101  Q
    ||||||||| ||||||| | |||| | |||||||||||||||||||||||||  ||| ||||||||||||||| ||  |||||||||| ||||||||    
T  2267344 tgtcttcagaagcagttttcttcatatgctttaagcttcctttttgttgatttctttactctctattgttcttccaagacctttttaaaatgtcaaa 2267440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 25 - 101
Target Start/End: Complemental strand, 39200796 - 39200720
Alignment:
Q  25 ttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaa 101  Q
    |||| |||||||||||||||||||||||||||| ||| |||| |||||||||| ||  |||||||||||||||||||    
T  39200796 ttcatacgctttaagcttcctttttgttgattcctttgctctttattgttcttccaagacctttttaagatgtcaaa 39200720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 8 - 86
Target Start/End: Original strand, 19717796 - 19717874
Alignment:
Q  8 cttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 86  Q
    ||||||||||| |||| ||||||||||||||||||||||||| ||||||| ||| | |||| |||||||| ||||||||    
T  19717796 cttcaggagcacttctcttcagacgctttaagcttcctttttattgattcctttgccctcttttgttcttccagaacct 19717874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 12 - 86
Target Start/End: Complemental strand, 28492220 - 28492146
Alignment:
Q  12 aggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 86  Q
    ||||||| |||| |||||||||||||||||||||||||||||||||||||  ||||| || ||||| ||||||||    
T  28492220 aggagcacttctcttcagacgctttaagcttcctttttgttgattcatttgttctcttttattcttccagaacct 28492146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 2 - 127
Target Start/End: Complemental strand, 44821339 - 44821212
Alignment:
Q  2 ctttgtcttcaggagcagttcttttcagacgctttaagctt-cctttttgttgattcattttctctcta-ttgttctttcagaacctttttaagatgtca 99  Q
    |||| ||||||||||||||| | |||||||||||||||||| |||||||||||||  |||| |||| || |||||||| ||  |||||||||||||||||    
T  44821339 ctttatcttcaggagcagttttcttcagacgctttaagcttccctttttgttgatgtatttgctctttatttgttcttccaagacctttttaagatgtca 44821240  T
Q  100 aannnnnnnctatggtcctgtacacttg 127  Q
    ||       |||| ||||||||||||||    
T  44821239 aatttttgtctatagtcctgtacacttg 44821212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 22464587 - 22464486
Alignment:
Q  1 actttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttc-agaacctttttaagatgtca 99  Q
    ||||||||||||||||||||| | |||| |  ||||||||||||||||||||||||| ||| |||| |||||||||| | |||   ||||||||||||||    
T  22464587 actttgtcttcaggagcagttttcttcatatactttaagcttcctttttgttgattcctttgctctatattgttcttccaagactttttttaagatgtca 22464488  T
Q  100 aa 101  Q
    ||    
T  22464487 aa 22464486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 8 - 99
Target Start/End: Original strand, 10251283 - 10251376
Alignment:
Q  8 cttcaggagcagttcttttcagacgctttaagcttcc-tttttgttgattcattttctctcta-ttgttctttcagaacctttttaagatgtca 99  Q
    |||||||||||||| | |||||||||||||||||||| |||||||||||  |||| |||| || |||||||| ||  |||||||||||||||||    
T  10251283 cttcaggagcagttttcttcagacgctttaagcttccatttttgttgatgtatttgctctttatttgttcttccaagacctttttaagatgtca 10251376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 101
Target Start/End: Original strand, 7310090 - 7310185
Alignment:
Q  3 tttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaa 101  Q
    |||||||||||||||| |||| |||||| ||| ||||||||||    |||||||| ||  |||||| |||||||| |||||||| ||||||||||||||    
T  7310090 tttgtcttcaggagcacttctcttcagatgctataagcttccta---gttgattctttagctctcttttgttcttccagaacctatttaagatgtcaaa 7310185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 9 - 77
Target Start/End: Complemental strand, 20954242 - 20954174
Alignment:
Q  9 ttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctt 77  Q
    |||||||||| |||| |||||| |||| ||||||||||||||||||||| ||| |||||| ||||||||    
T  20954242 ttcaggagcacttctcttcagatgcttcaagcttcctttttgttgattcctttgctctcttttgttctt 20954174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 35040434 - 35040480
Alignment:
Q  1 actttgtcttcaggagcagttcttttcagacgctttaagcttccttt 47  Q
    ||||||||||||||||||||| | |||||||||||||||||||||||    
T  35040434 actttgtcttcaggagcagttttcttcagacgctttaagcttccttt 35040480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 8 - 127
Target Start/End: Original strand, 21703121 - 21703242
Alignment:
Q  8 cttcaggagcagttcttttcagacgctttaagcttc-ctttttgttgattcattttctctcta-ttgttctttcagaacctttttaagatgtcaaannnn 105  Q
    |||||||||||||| | ||||||||||||||||||| ||||| ||||||  |||| |||| || |||||||| ||  ||| |||||||||||||||        
T  21703121 cttcaggagcagttttcttcagacgctttaagcttctcttttggttgatgtatttgctctttatttgttcttccaagaccattttaagatgtcaaatttt 21703220  T
Q  106 nnnctatggtcctgtacacttg 127  Q
       |||| ||||||||||||||    
T  21703221 tgtctatagtcctgtacacttg 21703242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 8 - 86
Target Start/End: Original strand, 10757696 - 10757773
Alignment:
Q  8 cttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 86  Q
    ||||| ||||| |||| |||| |||||| |||||||||||| |||||||| ||  |||||| |||||||||||||||||    
T  10757696 cttcaagagcacttctcttcaaacgcttcaagcttcctttt-gttgattccttagctctcttttgttctttcagaacct 10757773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 3 - 77
Target Start/End: Complemental strand, 33256146 - 33256072
Alignment:
Q  3 tttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctt 77  Q
    |||||||||| ||||| |||| |||| |||| ||||||||| ||||||||||||| ||| ||||||  |||||||    
T  33256146 tttgtcttcaagagcacttctcttcaaacgccttaagcttcatttttgttgattcctttgctctcttctgttctt 33256072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 3 - 77
Target Start/End: Complemental strand, 33276318 - 33276244
Alignment:
Q  3 tttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctt 77  Q
    |||||||||| ||||| |||| |||| |||| ||||||||| ||||||||||||| ||| ||||||  |||||||    
T  33276318 tttgtcttcaagagcacttctcttcaaacgccttaagcttcatttttgttgattcctttgctctcttctgttctt 33276244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 12284723 - 12284779
Alignment:
Q  1 actttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattc 57  Q
    |||||| ||||||||||| |||| |||||| | || |||||||||||||||||||||    
T  12284723 actttgacttcaggagcacttctcttcagatgtttcaagcttcctttttgttgattc 12284779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 55
Target Start/End: Original strand, 23025053 - 23025101
Alignment:
Q  8 cttcaggagcagttcttttcagacgctttaagctt-cctttttgttgat 55  Q
    |||||||||||||| | |||||||||||||||||| |||||||||||||    
T  23025053 cttcaggagcagttttcttcagacgctttaagcttccctttttgttgat 23025101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 101
Target Start/End: Complemental strand, 21120859 - 21120764
Alignment:
Q  8 cttcaggagcagttcttttcagacgctttaagctt-cctttttgttgattcattttctctcta-ttgttctttcagaacctttttaagatgtcaaa 101  Q
    |||||||||||||| | ||||||||||| |||||| |||||||||||||  | || |||| || |||||||||||  |||  ||||||||||||||    
T  21120859 cttcaggagcagttttcttcagacgcttaaagcttccctttttgttgatatacttgctctttatttgttctttcaagaccaatttaagatgtcaaa 21120764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 101
Target Start/End: Complemental strand, 21204724 - 21204625
Alignment:
Q  4 ttgtcttcaggagcagttcttttcagacgctttaagctt-cctttttgttgattcattttctctcta-ttgttctttcagaacctttttaagatgtcaaa 101  Q
    ||||||||||||||| || | || ||||||||||||||| |||||||||||||  | || |||| || |||||||||||  |||  ||||||||||||||    
T  21204724 ttgtcttcaggagcacttttctttagacgctttaagcttccctttttgttgatgtacttgctctttatttgttctttcaagaccaatttaagatgtcaaa 21204625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 101
Target Start/End: Original strand, 21984863 - 21984958
Alignment:
Q  8 cttcaggagcagttcttttcagacgctttaagctt-cctttttgttgattcattttctctcta-ttgttctttcagaacctttttaagatgtcaaa 101  Q
    |||||||||||||| | ||||||||||| |||||| |||||||||||||  | || |||| || |||||||||||  |||  ||||||||||||||    
T  21984863 cttcaggagcagttttcttcagacgcttaaagcttccctttttgttgatgtacttgctctttatttgttctttcaagaccaatttaagatgtcaaa 21984958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 101
Target Start/End: Original strand, 30572457 - 30572552
Alignment:
Q  8 cttcaggagcagttcttttcagacgctttaagctt-cctttttgttgattcattttctctcta-ttgttctttcagaacctttttaagatgtcaaa 101  Q
    |||||||||||||| | |||||||||||||| ||| |||||||||||||  |||| |||| || || ||||| ||  ||| |||||||||||||||    
T  30572457 cttcaggagcagttttcttcagacgctttaaacttccctttttgttgatgtatttgctctttatttattcttccaagaccattttaagatgtcaaa 30572552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 30893346 - 30893432
Alignment:
Q  1 actttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctcta-ttgttctttcagaacct 86  Q
    |||||| ||||||||||| |||| |||||| |||| ||| ||||| ||||||||||| ||  ||||| | ||| |||||||||||||    
T  30893346 actttgacttcaggagcacttctcttcagatgcttcaagtttcctctttgttgattccttagctctcaatttgctctttcagaacct 30893432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 86
Target Start/End: Original strand, 48704491 - 48704569
Alignment:
Q  8 cttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 86  Q
    ||||||||||| |||| || ||| |||| ||||||| ||||||||||||   || |||||| |||||||| ||||||||    
T  48704491 cttcaggagcacttctctttagatgcttcaagcttcatttttgttgatttcattgctctcttttgttcttccagaacct 48704569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 44 - 101
Target Start/End: Original strand, 35402146 - 35402203
Alignment:
Q  44 ctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaa 101  Q
    ||||||||||||||  || |||||| |||||||| || ||||||||||||||| ||||    
T  35402146 ctttttgttgattccattgctctcttttgttcttccataacctttttaagatgacaaa 35402203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 55
Target Start/End: Complemental strand, 21134955 - 21134907
Alignment:
Q  8 cttcaggagcagttcttttcagacgctttaagctt-cctttttgttgat 55  Q
    |||||||||||||| | ||||||||||| |||||| |||||||||||||    
T  21134955 cttcaggagcagttttcttcagacgcttaaagcttccctttttgttgat 21134907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 77; Significance: 7e-36; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 13575977 - 13575877
Alignment:
Q  1 actttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaa 100  Q
    ||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||  ||||||||||||||||||    
T  13575977 actttgtcttcaggagcagttttcttcagacgctttaagcttcctttttgttgattcatttgctctctattgttcttccaagacctttttaagatgtcaa 13575878  T
Q  101 a 101  Q
    |    
T  13575877 a 13575877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 10073201 - 10073301
Alignment:
Q  1 actttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaa 100  Q
    |||||||||||||||||| || | ||||||||||||||||||||||||||||||||| ||| ||||||||||||||| || |||||||||||||||||||    
T  10073201 actttgtcttcaggagcacttttcttcagacgctttaagcttcctttttgttgattcctttgctctctattgttcttccataacctttttaagatgtcaa 10073300  T
Q  101 a 101  Q
    |    
T  10073301 a 10073301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 8 - 127
Target Start/End: Complemental strand, 37435347 - 37435228
Alignment:
Q  8 cttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaannnnnn 107  Q
    ||||||||||| |||| |||||| |||| ||||||||||||||||||||||||| |||||| |||||||| |||||||| ||||||||||||||          
T  37435347 cttcaggagcacttctcttcagatgcttcaagcttcctttttgttgattcatttgctctcttttgttcttccagaacctatttaagatgtcaaatttttg 37435248  T
Q  108 nctatggtcctgtacacttg 127  Q
     |||||||||||||||||||    
T  37435247 tctatggtcctgtacacttg 37435228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 3 - 127
Target Start/End: Original strand, 45833676 - 45833800
Alignment:
Q  3 tttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaan 102  Q
    |||||||||||||||  ||||||||||| |||| ||||||||||||||||||||| ||| |||||| |||||||| || ||||||||||||||||||||     
T  45833676 tttgtcttcaggagcgcttcttttcagatgcttcaagcttcctttttgttgattcgtttgctctcttttgttcttccaaaacctttttaagatgtcaaat 45833775  T
Q  103 nnnnnnctatggtcctgtacacttg 127  Q
          |||||||| ||||||||||    
T  45833776 ttttgtctatggtcatgtacacttg 45833800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 3395904 - 3395989
Alignment:
Q  1 actttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 86  Q
    |||||| |||||||||||||||| ||||||||||||||||||||||||||||||||| ||| |||||| |||||||| ||||||||    
T  3395904 actttgacttcaggagcagttctcttcagacgctttaagcttcctttttgttgattcctttgctctcttttgttcttccagaacct 3395989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 17 - 101
Target Start/End: Original strand, 3497928 - 3498012
Alignment:
Q  17 cagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaa 101  Q
    ||||||| ||||||||||||||||||||||||||||||||| ||| |||| |||||||||| || ||||||||||||||||||||    
T  3497928 cagttctcttcagacgctttaagcttcctttttgttgattcctttgctctatattgttcttccaaaacctttttaagatgtcaaa 3498012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 14604740 - 14604640
Alignment:
Q  1 actttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaa 100  Q
    |||||| ||||||||||| |||| |||||||| || ||||||||||||||||||||| ||  |||||| |||||||| ||||||||||||||||||||||    
T  14604740 actttgacttcaggagcacttctcttcagacgtttcaagcttcctttttgttgattccttagctctcttttgttcttccagaacctttttaagatgtcaa 14604641  T
Q  101 a 101  Q
    |    
T  14604640 a 14604640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 54680176 - 54680276
Alignment:
Q  1 actttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaa 100  Q
    |||||||||||||||||| || | ||||||||||||||||||||||||||||||||| ||| |||| |||||||||| ||  |||||||||||||| |||    
T  54680176 actttgtcttcaggagcaattttcttcagacgctttaagcttcctttttgttgattcctttgctctttattgttcttccaagacctttttaagatgacaa 54680275  T
Q  101 a 101  Q
    |    
T  54680276 a 54680276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 8 - 127
Target Start/End: Original strand, 56034844 - 56034963
Alignment:
Q  8 cttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaannnnnn 107  Q
    |||||||| || || | ||||||||||| |||||| |||||||||||||||||| |||||| |||||||| |||||||||||||||||||||||          
T  56034844 cttcaggatcacttttcttcagacgcttcaagctttctttttgttgattcatttgctctcttttgttcttccagaacctttttaagatgtcaaatttttg 56034943  T
Q  108 nctatggtcctgtacacttg 127  Q
     |||||||| ||||||||||    
T  56034944 tctatggtcatgtacacttg 56034963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 8 - 101
Target Start/End: Original strand, 3793376 - 3793469
Alignment:
Q  8 cttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaa 101  Q
    |||||||||||||| | ||||||| |||||||||| |||||||||||||| ||| |||| |||||||||| ||  |||||||||||||||||||    
T  3793376 cttcaggagcagttttcttcagacactttaagctttctttttgttgattcctttgctctttattgttcttccaagacctttttaagatgtcaaa 3793469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 19620925 - 19620799
Alignment:
Q  1 actttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaa 100  Q
    |||||| |||||||||||  ||| |||||| |||||||||||||||||||||||||| ||| |||||| |||||||| ||||||||  | ||||| ||||    
T  19620925 actttgacttcaggagcacgtctcttcagatgctttaagcttcctttttgttgattcctttgctctcttttgttcttccagaacctaataaagatatcaa 19620826  T
Q  101 annnnnnnctatggtcctgtacacttg 127  Q
    |       |||||||||||||||||||    
T  19620825 atttttgtctatggtcctgtacacttg 19620799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 29121652 - 29121753
Alignment:
Q  1 actttgtcttcaggagcagttcttttcagacgctttaagcttcc-tttttgttgattcattttctctctattgttctttcagaacctttttaagatgtca 99  Q
    |||||||||||||| |||||| | |||||||| ||||||||||| ||||||||||||| ||| |||| |||||||||| ||  |||||||||||||||||    
T  29121652 actttgtcttcaggtgcagttttcttcagacgttttaagcttccctttttgttgattcctttgctctttattgttcttccaagacctttttaagatgtca 29121751  T
Q  100 aa 101  Q
    ||    
T  29121752 aa 29121753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 19884967 - 19885095
Alignment:
Q  1 actttgtcttcaggagcagttcttttcagacgctttaagcttcctt--tttgttgattcattttctctctattgttctttcagaacctttttaagatgtc 98  Q
    ||||||||||||||||||||| | ||||||||||||||||||||||  |||||||||||  || ||||||||| ||||| ||  ||| ||||||||||||    
T  19884967 actttgtcttcaggagcagttttcttcagacgctttaagcttccttggtttgttgattccattgctctctattattcttccaagaccattttaagatgtc 19885066  T
Q  99 aaannnnnnnctatggtcctgtacacttg 127  Q
    |||       |||| ||||||||||||||    
T  19885067 aaatttttgtctatagtcctgtacacttg 19885095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 3 - 86
Target Start/End: Original strand, 9141143 - 9141226
Alignment:
Q  3 tttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 86  Q
    |||||||||||||||| |||| ||||||||| ||||||||||||||||||||||| ||| |||||| |||||||| || |||||    
T  9141143 tttgtcttcaggagcacttctcttcagacgccttaagcttcctttttgttgattcctttgctctcttttgttcttccataacct 9141226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 2 - 101
Target Start/End: Original strand, 55732074 - 55732173
Alignment:
Q  2 ctttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaa 101  Q
    |||| ||||||||||||||| | |||||||||||||||||||| |||||||||||  ||| |||| |||||||||| ||  ||||||||||||| |||||    
T  55732074 ctttatcttcaggagcagttttcttcagacgctttaagcttcccttttgttgatttctttgctctttattgttcttccaagacctttttaagatatcaaa 55732173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 22675383 - 22675283
Alignment:
Q  1 actttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaa 100  Q
    |||||||||| ||||| |||| | ||||||||||||||| |||  |||||||||||| ||| ||||||||||||||| ||  |||| |||||||||||||    
T  22675383 actttgtctttaggagaagttttcttcagacgctttaagattcaattttgttgattcctttgctctctattgttcttccaagacctctttaagatgtcaa 22675284  T
Q  101 a 101  Q
    |    
T  22675283 a 22675283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 7 - 86
Target Start/End: Complemental strand, 14904146 - 14904067
Alignment:
Q  7 tcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 86  Q
    ||||||| || |||||| ||||||||||||||||||| |||||||| |||||||| |||||| |||||||| ||||||||    
T  14904146 tcttcagaaggagttctcttcagacgctttaagcttcttttttgtttattcatttgctctcttttgttcttccagaacct 14904067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 8 - 127
Target Start/End: Complemental strand, 12811020 - 12810901
Alignment:
Q  8 cttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaannnnnn 107  Q
    |||||| |||| ||||  ||||| |||  |||||||||||||||||||||  || |||||| |||||||| |||||||| ||||||||||||||          
T  12811020 cttcagaagcacttctgctcagatgctacaagcttcctttttgttgattccattgctctcttttgttcttccagaacctatttaagatgtcaaatttttg 12810921  T
Q  108 nctatggtcctgtacacttg 127  Q
     |||||||||||||||||||    
T  12810920 tctatggtcctgtacacttg 12810901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 8 - 101
Target Start/End: Original strand, 16853765 - 16853858
Alignment:
Q  8 cttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaa 101  Q
    |||||||||||| | | ||||||||||||||||||||||||||||||||| ||| ||||  |||||||||  |  ||||||||||||| |||||    
T  16853765 cttcaggagcagatttcttcagacgctttaagcttcctttttgttgattcctttgctcttaattgttcttcaaagacctttttaagatatcaaa 16853858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 8 - 85
Target Start/End: Original strand, 55380528 - 55380605
Alignment:
Q  8 cttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacc 85  Q
    ||||||||||| |||| ||||||||||| ||||||||||||||||||||| ||  |||||| ||||| ||||||||||    
T  55380528 cttcaggagcacttctcttcagacgcttcaagcttcctttttgttgattccttagctctcttttgttttttcagaacc 55380605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 3 - 86
Target Start/End: Original strand, 12601381 - 12601464
Alignment:
Q  3 tttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 86  Q
    |||||||| |||| || |||| |||||| || ||||||||||||||||||||||| ||| |||||| |||||||| ||||||||    
T  12601381 tttgtcttaaggaacacttctcttcagatgccttaagcttcctttttgttgattcctttgctctcttttgttcttccagaacct 12601464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 2 - 101
Target Start/End: Original strand, 6517766 - 6517868
Alignment:
Q  2 ctttgtcttcaggagcagttctt-ttcagacgctttaagctt-cctttttgttgattcattttctctcta-ttgttctttcagaacctttttaagatgtc 98  Q
    |||| ||||||||||||||| || |||||||||||||||||| |||||||||||||  |||| |||| || |||||||| ||  ||||||||||||||||    
T  6517766 ctttatcttcaggagcagtttttcttcagacgctttaagcttccctttttgttgatgtatttgctctttatttgttcttccaagacctttttaagatgtc 6517865  T
Q  99 aaa 101  Q
    |||    
T  6517866 aaa 6517868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 2 - 74
Target Start/End: Original strand, 8105950 - 8106023
Alignment:
Q  2 ctttgtcttcaggagcagttcttttcagacgctttaagctt-cctttttgttgattcattttctctctattgtt 74  Q
    |||| ||||||||||||||| | |||||||||||||||||| ||||||||||||||| ||| |||| |||||||    
T  8105950 ctttatcttcaggagcagttttcttcagacgctttaagcttccctttttgttgattcctttgctctttattgtt 8106023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 101
Target Start/End: Original strand, 17247539 - 17247639
Alignment:
Q  2 ctttgtcttcaggagcagttcttttcagacgctttaagctt-cctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaa 100  Q
    |||||||||||||||||||| | |  |||| |||||||||| ||||||||||||||| ||| |||| | |||||||| ||  ||||||||| ||||||||    
T  17247539 ctttgtcttcaggagcagttttctggagacactttaagctttcctttttgttgattcctttgctctttgttgttcttccaagacctttttaggatgtcaa 17247638  T
Q  101 a 101  Q
    |    
T  17247639 a 17247639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 9 - 101
Target Start/End: Complemental strand, 25650966 - 25650872
Alignment:
Q  9 ttcaggagcagttcttttcagacgctttaagctt-cctttttgttgattcattttctctcta-ttgttctttcagaacctttttaagatgtcaaa 101  Q
    ||||||||||||| | |||||||||||||||||| |||||||||||||  |||| |||| || |||||||| ||  ||||| |||||||||||||    
T  25650966 ttcaggagcagttttcttcagacgctttaagcttccctttttgttgatgtatttgctctttatttgttcttccaataccttcttaagatgtcaaa 25650872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 16632717 - 16632802
Alignment:
Q  1 actttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 86  Q
    |||||| ||| ||||||| |||| |||||| |||| |||||||||||||||||||||  || |||||| ||||| || ||||||||    
T  16632717 actttgactttaggagcacttctcttcagatgcttcaagcttcctttttgttgattccattgctctcttttgtttttccagaacct 16632802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 29680391 - 29680306
Alignment:
Q  1 actttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 86  Q
    |||||| |||||||| || |||| ||||||  ||| ||||||||||||||||||||| ||| |||||| ||||||||  |||||||    
T  29680391 actttgacttcaggaacacttctcttcagatacttcaagcttcctttttgttgattcctttgctctcttttgttcttctagaacct 29680306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 4 - 127
Target Start/End: Complemental strand, 3105282 - 3105157
Alignment:
Q  4 ttgtcttcaggagcagttcttttcagacgctttaagctt-cctttttgttgattcattttctctcta-ttgttctttcagaacctttttaagatgtcaaa 101  Q
    |||||||||||||||||| | ||||||| |||||||||| |||||||||||||  | || |||| || |||||||| || ||||  ||||||||||||||    
T  3105282 ttgtcttcaggagcagttttcttcagacactttaagcttccctttttgttgatgtacttgctctttatttgttcttccaaaaccaatttaagatgtcaaa 3105183  T
Q  102 nnnnnnnctatggtcctgtacacttg 127  Q
           |||| ||||||||||||||    
T  3105182 tttttgtctatagtcctgtacacttg 3105157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 101
Target Start/End: Original strand, 16940247 - 16940346
Alignment:
Q  8 cttcaggagcagttcttttcagacgctttaagcttccttttt-----gttgattcattttctctctatt-gttctttcagaacctttttaagatgtcaaa 101  Q
    |||||||||||||| | |||||||||||||||||||||||||     ||||||  |||| |||| |||| |||||| ||  |||||||||||||||||||    
T  16940247 cttcaggagcagttttcttcagacgctttaagcttccttttttttttgttgatgtatttgctctttatttgttcttccaagacctttttaagatgtcaaa 16940346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 101
Target Start/End: Original strand, 10693137 - 10693233
Alignment:
Q  7 tcttcaggagcagttcttttcagacgctttaagcttcc-tttttgttgattcattttctctctattgttctttc-agaacctttttaagatgtcaaa 101  Q
    |||||| |||| ||| | |||| ||||||||||||||| ||||||||||||| ||| |||| ||||||| || | ||| | ||||||||||||||||    
T  10693137 tcttcatgagctgttttcttcaaacgctttaagcttccctttttgttgattcctttgctctttattgtttttccaagaccttttttaagatgtcaaa 10693233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 101
Target Start/End: Original strand, 10906903 - 10906999
Alignment:
Q  7 tcttcaggagcagttcttttcagacgctttaagcttcc-tttttgttgattcattttctctctattgttctttc-agaacctttttaagatgtcaaa 101  Q
    |||||| |||| ||| | |||| ||||||||||||||| ||||||||||||| ||| |||| ||||||| || | ||| | ||||||||||||||||    
T  10906903 tcttcatgagctgttttcttcaaacgctttaagcttccctttttgttgattcctttgctctttattgtttttccaagaccttttttaagatgtcaaa 10906999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 55
Target Start/End: Original strand, 14571312 - 14571360
Alignment:
Q  8 cttcaggagcagttcttttcagacgctttaagctt-cctttttgttgat 55  Q
    |||||||||||||| | |||||||||||||||||| |||||||||||||    
T  14571312 cttcaggagcagttttcttcagacgctttaagcttccctttttgttgat 14571360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 55
Target Start/End: Original strand, 22191126 - 22191174
Alignment:
Q  8 cttcaggagcagttcttttcagacgctttaagctt-cctttttgttgat 55  Q
    |||||||||||||| | |||||||||||||||||| |||||||||||||    
T  22191126 cttcaggagcagttttcttcagacgctttaagcttccctttttgttgat 22191174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 127
Target Start/End: Complemental strand, 14153811 - 14153685
Alignment:
Q  3 tttgtcttcaggagcagttctt-ttcaga--cgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtca 99  Q
    |||||||||||||||||||||| ||||||  |||||||||||||| ||| |||| ||| ||  |||||| |||| |  ||||||||| |||||||||| |    
T  14153811 tttgtcttcaggagcagttcttcttcagaagcgctttaagcttcc-tttcgttgtttccttagctctcttttgtccaatcagaacctctttaagatgtta 14153713  T
Q  100 aannnnnnnctatggtcctgtacacttg 127  Q
    ||       ||||||||||||| |||||    
T  14153712 aatttttgtctatggtcctgtatacttg 14153685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 86
Target Start/End: Original strand, 40846368 - 40846447
Alignment:
Q  8 cttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctcta-ttgttctttcagaacct 86  Q
    ||||||||||| || | |||||| |||| |||||||||||||||||||||  |  ||||| | |||||||||||||||||    
T  40846368 cttcaggagcacttttcttcagatgcttcaagcttcctttttgttgattccataactctcaatttgttctttcagaacct 40846447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 101
Target Start/End: Original strand, 413283 - 413387
Alignment:
Q  2 ctttgtcttcaggagcagttcttttcagacgctttaag------cttcctttttgttgattcattttctctctattgttctttcagaacctttttaagat 95  Q
    |||||||||||||||||||| | |||||||||||||||       ||  ||||||||||||| ||| |||| |||||||||| ||  |||||||||| ||    
T  413283 ctttgtcttcaggagcagttttcttcagacgctttaagttttttttttttttttgttgattcctttgctctttattgttcttccaagacctttttaa-at 413381  T
Q  96 gtcaaa 101  Q
    ||||||    
T  413382 gtcaaa 413387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 77
Target Start/End: Original strand, 14833673 - 14833747
Alignment:
Q  3 tttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctt 77  Q
    |||||||||||||||| |||  |||||| |||| ||| || |||||||||||||  ||| |||||| ||||||||    
T  14833673 tttgtcttcaggagcacttcgcttcagatgcttcaagttttctttttgttgatttctttgctctcttttgttctt 14833747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 10 - 101
Target Start/End: Complemental strand, 39419564 - 39419471
Alignment:
Q  10 tcaggagcagttcttttcagacgctttaagctt-cctttttgttgattcattttctctcta-ttgttctttcagaacctttttaagatgtcaaa 101  Q
    |||||||||||| | ||||||||||| |||||| ||||||||||||   | || |||| || |||||||||||| |||  ||||||||||||||    
T  39419564 tcaggagcagttttcttcagacgcttgaagcttccctttttgttgaaatacttgctctttatttgttctttcaggaccaatttaagatgtcaaa 39419471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 8 - 49
Target Start/End: Original strand, 40860961 - 40861002
Alignment:
Q  8 cttcaggagcagttcttttcagacgctttaagcttccttttt 49  Q
    |||||||||||||| | |||||||||||||||||||| ||||    
T  40860961 cttcaggagcagttttcttcagacgctttaagcttccctttt 40861002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251 (Bit Score: 74; Significance: 5e-34; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 7974 - 8100
Alignment:
Q  1 actttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaa 100  Q
    |||||||||||||||||| || | |||||||||||||||||| |||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||    
T  7974 actttgtcttcaggagcaattttcttcagacgctttaagctttctttttgttgattcctttgctctctattgttcttccagaacctttttaagatgtcaa 8073  T
Q  101 annnnnnnctatggtcctgtacacttg 127  Q
    |       ||||| |||||||||||||    
T  8074 agttttgtctatgatcctgtacacttg 8100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 73; Significance: 2e-33; HSPs: 3)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 19319 - 19419
Alignment:
Q  1 actttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaa 100  Q
    ||||||| ||||||||||||| | |||||| |||||||||||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||    
T  19319 actttgtgttcaggagcagttttcttcagatgctttaagcttcctttttgttgattcctttgctctctattgttcttccagaacctttttaagatgtcaa 19418  T
Q  101 a 101  Q
    |    
T  19419 a 19419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 21943 - 21841
Alignment:
Q  1 actttgtcttcaggagcagttcttttcagacgctttaagcttc-ctttttgttgattcattttctctcta-ttgttctttcagaacctttttaagatgtc 98  Q
    ||||||||||||||||||||  | |||||||  |||||||||| ||||||||||||  |||| |||| || |||||||| ||  ||||||||||||||||    
T  21943 actttgtcttcaggagcagtattcttcagacattttaagcttcactttttgttgatgtatttgctctttatttgttcttccaagacctttttaagatgtc 21844  T
Q  99 aaa 101  Q
    |||    
T  21843 aaa 21841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 101
Target Start/End: Original strand, 9853 - 9948
Alignment:
Q  8 cttcaggagcagttcttttcagacgctttaagctt-cctttttgttgattcattttctctcta-ttgttctttcagaacctttttaagatgtcaaa 101  Q
    |||||||||||||| | ||| |||||||||||||| |||||||||||||  | || |||| || |||||||| ||  |||||||||||||||||||    
T  9853 cttcaggagcagttttcttctgacgctttaagcttccctttttgttgatgtacttgctctttatttgttcttccaagacctttttaagatgtcaaa 9948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 143375 - 143501
Alignment:
Q  1 actttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaa 100  Q
    |||||||||||| |||||||| | ||||||||||||||||||||||||| ||||||| ||| ||||||||||||||| |||||||||||||| |||||||    
T  143375 actttgtcttcaagagcagttttcttcagacgctttaagcttcctttttcttgattcctttgctctctattgttcttccagaacctttttaatatgtcaa 143474  T
Q  101 annnnnnnctatggtcctgtacacttg 127  Q
    |       |||||||||| ||||||||    
T  143475 atttttgtctatggtcctatacacttg 143501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1359 (Bit Score: 69; Significance: 4e-31; HSPs: 1)
Name: scaffold1359
Description:

Target: scaffold1359; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 514 - 414
Alignment:
Q  1 actttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaa 100  Q
    ||||||||||||||||||||| | ||||||||||||||||||||||||||||||||| ||| |||| |||||||||| ||  ||||||||||||||||||    
T  514 actttgtcttcaggagcagttttcttcagacgctttaagcttcctttttgttgattcctttgctctttattgttcttccaagacctttttaagatgtcaa 415  T
Q  101 a 101  Q
    |    
T  414 a 414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 3 - 127
Target Start/End: Original strand, 103843 - 103967
Alignment:
Q  3 tttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaan 102  Q
    |||||||||||||||  |||| |||||| |||| ||||||||| ||||||||||||||| |||||| ||||||||||||||||||||||||||||||||     
T  103843 tttgtcttcaggagcgcttctcttcagatgcttcaagcttcctatttgttgattcatttgctctcttttgttctttcagaacctttttaagatgtcaaat 103942  T
Q  103 nnnnnnctatggtcctgtacacttg 127  Q
          ||| |||||||||||||||    
T  103943 ttttgtctaaggtcctgtacacttg 103967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 68; Significance: 2e-30; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 33022929 - 33023028
Alignment:
Q  1 actttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaa 100  Q
    ||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| ||| ||||| ||||||||| ||  ||||||||||||||||||    
T  33022929 actttgtcttcaggagcagtttttttcagacgttttaagcttcctttttgttgattcctttgctctcgattgttcttccaagacctttttaagatgtcaa 33023028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 12 - 127
Target Start/End: Complemental strand, 7745508 - 7745393
Alignment:
Q  12 aggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaannnnnnncta 111  Q
    ||||||| |||| ||||||||||| ||||||||||||||||||| ||||| |||||| ||||||||||||||||| ||||||||||||||       |||    
T  7745508 aggagcacttctcttcagacgcttcaagcttcctttttgttgatccatttgctctcttttgttctttcagaacctatttaagatgtcaaatttttgtcta 7745409  T
Q  112 tggtcctgtacacttg 127  Q
    |||| |||||||||||    
T  7745408 tggttctgtacacttg 7745393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 5430149 - 5430249
Alignment:
Q  1 actttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaa 100  Q
    |||||||||||||||||| || | ||| ||||||||||||||||||||||||||||| ||| |||| |||||||||| ||  ||||||||||||||||||    
T  5430149 actttgtcttcaggagcacttttcttcggacgctttaagcttcctttttgttgattcctttgctctttattgttcttccaagacctttttaagatgtcaa 5430248  T
Q  101 a 101  Q
    |    
T  5430249 a 5430249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 31118141 - 31118241
Alignment:
Q  1 actttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaa 100  Q
    |||||||||||| ||| |||| | ||||||||||||||||||||||||||||||||| ||| |||| |||||||||| ||  ||||||||||||||||||    
T  31118141 actttgtcttcatgagtagttttcttcagacgctttaagcttcctttttgttgattcctttgctctttattgttcttccaagacctttttaagatgtcaa 31118240  T
Q  101 a 101  Q
    |    
T  31118241 a 31118241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 3 - 86
Target Start/End: Original strand, 21910809 - 21910892
Alignment:
Q  3 tttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 86  Q
    |||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||| |||||| ||||||||  |||||||    
T  21910809 tttgtcttcaggagcacttctcttcagacgctttaagcttcctttttgttgattcatttgctctcttttgttcttctagaacct 21910892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 3 - 77
Target Start/End: Original strand, 26784624 - 26784698
Alignment:
Q  3 tttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctt 77  Q
    |||||||||||||||| |||| ||||||||||||||||||||||||||||||||| ||| |||||| ||||||||    
T  26784624 tttgtcttcaggagcacttctcttcagacgctttaagcttcctttttgttgattcctttgctctcttttgttctt 26784698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 14086409 - 14086333
Alignment:
Q  1 actttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctt 77  Q
    ||||||||||||||||||||| | |||| |||||||||||||||||||||||||||| ||| |||| ||||||||||    
T  14086409 actttgtcttcaggagcagttttcttcatacgctttaagcttcctttttgttgattcctttgctctttattgttctt 14086333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 3 - 86
Target Start/End: Original strand, 17815250 - 17815333
Alignment:
Q  3 tttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 86  Q
    |||||||||||||||| |||| |||||| | |||||||||||||||||||||||| ||| |||||| |||||||| ||||||||    
T  17815250 tttgtcttcaggagcacttctcttcagatgttttaagcttcctttttgttgattcctttactctcttttgttcttccagaacct 17815333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 33933583 - 33933678
Alignment:
Q  1 actttgtcttcaggagcagttcttttcagacgctttaagcttc-ctttttgttgattcattttctctctattgttctttcagaacctttttaagat 95  Q
    ||||| ||||||||||||||| | |||||||| |||||||||| |||||||||||||| ||| ||||||||||||||| ||  |||||||||||||    
T  33933583 actttttcttcaggagcagttttcttcagacgatttaagcttctctttttgttgattcctttgctctctattgttcttccaagacctttttaagat 33933678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 2 - 101
Target Start/End: Original strand, 15517252 - 15517353
Alignment:
Q  2 ctttgtcttcaggagcagttcttttcagacgctttaagctt-cctttttgttgattcattttctctcta-ttgttctttcagaacctttttaagatgtca 99  Q
    |||| ||||||||||||||| | |||||||||||||||||| |||||||||||||  |||| |||| || |||||||||||  |||||||||||||||||    
T  15517252 ctttatcttcaggagcagttttcttcagacgctttaagcttccctttttgttgatgtatttgctctttatttgttctttcaagacctttttaagatgtca 15517351  T
Q  100 aa 101  Q
    ||    
T  15517352 aa 15517353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 8 - 127
Target Start/End: Original strand, 20551149 - 20551269
Alignment:
Q  8 cttcaggagcagttcttttcagacgctttaagcttcctttt-tgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaannnnn 106  Q
    ||||||||||| |||| |||||| |||| |||||||||||| |||||||||  || |||||| |||||||| |||||||| ||||||||||||||         
T  20551149 cttcaggagcacttctcttcagatgcttcaagcttccttttttgttgattccattgctctcttttgttcttccagaacctatttaagatgtcaaattttt 20551248  T
Q  107 nnctatggtcctgtacacttg 127  Q
      |||||||||| ||||||||    
T  20551249 gtctatggtcctctacacttg 20551269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 2 - 95
Target Start/End: Original strand, 26759462 - 26759556
Alignment:
Q  2 ctttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctcta-ttgttctttcagaacctttttaagat 95  Q
    |||| ||||||||||||||| | |||||||||||||||||||||||||||||||  |||| |||| || |||||||| ||  |||||||||||||    
T  26759462 ctttatcttcaggagcagttttcttcagacgctttaagcttcctttttgttgatgtatttgctctttatttgttcttccaagacctttttaagat 26759556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 29138265 - 29138163
Alignment:
Q  1 actttgtcttcaggagcagttcttttcagacgctttaagcttcc-tttttgttgattcattttctctcta-ttgttctttcagaacctttttaagatgtc 98  Q
    ||||||||||||||| ||||| | |||||||||||||||||||| |||||||||||  |||| |||| || |||||||| ||  ||||||||||||||||    
T  29138265 actttgtcttcaggaacagttttcttcagacgctttaagcttccatttttgttgatgtatttgctctttacttgttcttccaagacctttttaagatgtc 29138166  T
Q  99 aaa 101  Q
    |||    
T  29138165 aaa 29138163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 8 - 127
Target Start/End: Original strand, 9089199 - 9089320
Alignment:
Q  8 cttcaggagcagttcttttcagacgctttaagctt-cctttttgttgattcattttctctcta-ttgttctttcagaacctttttaagatgtcaaannnn 105  Q
    |||||||||||||| | |||||||||||||||||| |||||||||||||  |||| |||| || |||||||| ||  |||||||||||||||||||        
T  9089199 cttcaggagcagttttcttcagacgctttaagcttccctttttgttgatgtatttgctctttatttgttcttccaagacctttttaagatgtcaaatttt 9089298  T
Q  106 nnnctatggtcctgtacacttg 127  Q
       |||| ||||||||||||||    
T  9089299 tgtctatagtcctgtacacttg 9089320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 8 - 86
Target Start/End: Complemental strand, 6512313 - 6512235
Alignment:
Q  8 cttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 86  Q
    |||||||| || |||| ||||||||| ||||||||||||||||||||||||||| || ||| ||||||||  |||||||    
T  6512313 cttcaggaacatttctcttcagacgccttaagcttcctttttgttgattcatttgctatcttttgttcttcaagaacct 6512235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 8 - 101
Target Start/End: Original strand, 11994202 - 11994296
Alignment:
Q  8 cttcaggagcagttcttttcagacgctttaagcttcc-tttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaa 101  Q
    |||||||||||||| | |||||| ||||||||||||| ||||||||||||| ||| ||||  ||||||||| ||  ||||||||||||| |||||    
T  11994202 cttcaggagcagttttcttcagatgctttaagcttccctttttgttgattcctttgctcttaattgttcttccaagacctttttaagatatcaaa 11994296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 89309 - 89224
Alignment:
Q  1 actttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 86  Q
    |||||| |||||| |||| |||| ||||||| ||| ||||||||||||||||||||| ||  |||||| |||||||| ||||||||    
T  89309 actttgacttcagaagcacttctcttcagacacttcaagcttcctttttgttgattccttagctctcttttgttcttccagaacct 89224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 4887287 - 4887364
Alignment:
Q  1 actttgtcttcaggagcagttcttttcagacgctttaagcttcc-tttttgttgattcattttctctctattgttctt 77  Q
    ||||| |||| |||| ||||| | |||||||||||||||||||| ||||||||||||| ||| |||||||||||||||    
T  4887287 actttatctttaggaacagttttcttcagacgctttaagcttccctttttgttgattcctttgctctctattgttctt 4887364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 9 - 86
Target Start/End: Complemental strand, 21072105 - 21072028
Alignment:
Q  9 ttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 86  Q
    |||| ||||| |||| ||||||||||| ||||||||||||||||||||| ||  |||| | |||||||||||||||||    
T  21072105 ttcatgagcacttctcttcagacgcttcaagcttcctttttgttgattccttagctcttttttgttctttcagaacct 21072028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 41566304 - 41566248
Alignment:
Q  1 actttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattc 57  Q
    ||||||||||||||||||||||| |||||||| ||||| |||| |||||||||||||    
T  41566304 actttgtcttcaggagcagttctcttcagacgttttaaccttcatttttgttgattc 41566248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 101
Target Start/End: Original strand, 42243979 - 42244079
Alignment:
Q  2 ctttgtcttcaggagcagttcttttcagacgctttaagcttcc-tttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaa 100  Q
    |||| ||||||||||| ||| | |||| ||||||||||||||| ||||||||||||  ||| |||| |||||||||| ||  ||||||||||||| ||||    
T  42243979 ctttatcttcaggagctgttttcttcatacgctttaagcttccctttttgttgatttctttgctctttattgttcttccaatacctttttaagatatcaa 42244078  T
Q  101 a 101  Q
    |    
T  42244079 a 42244079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 8 - 101
Target Start/End: Complemental strand, 3245289 - 3245194
Alignment:
Q  8 cttcaggagcagttcttttcagacgctttaagctt-cctttttgttgattcattttctctcta-ttgttctttcagaacctttttaagatgtcaaa 101  Q
    |||||||||||||| | |||||||||||||||||| |||||||||||||  |||| |||| || |||||||| ||  ||| |||||||||||||||    
T  3245289 cttcaggagcagttttcttcagacgctttaagcttccctttttgttgatgtatttgctctttatttgttcttccaagaccattttaagatgtcaaa 3245194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 8 - 101
Target Start/End: Complemental strand, 30115740 - 30115645
Alignment:
Q  8 cttcaggagcagttcttttcagacgctttaagctt-cctttttgttgattcattttctctcta-ttgttctttcagaacctttttaagatgtcaaa 101  Q
    |||||||||||||| | |||||||||||||||||| |||||||||||||  |||| |||| || |||||||| ||  ||| |||||||||||||||    
T  30115740 cttcaggagcagttttcttcagacgctttaagcttccctttttgttgatgtatttgctctttatttgttcttccaataccattttaagatgtcaaa 30115645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 8 - 86
Target Start/End: Complemental strand, 23412856 - 23412778
Alignment:
Q  8 cttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 86  Q
    ||||||||||| |||| |||||| |||| |||||||||||||||||||||  || |||||| ||| |||| ||||||||    
T  23412856 cttcaggagcacttctcttcagatgcttcaagcttcctttttgttgattccattgctctcttttgctcttccagaacct 23412778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 7 - 101
Target Start/End: Original strand, 28139858 - 28139954
Alignment:
Q  7 tcttcaggagcagttcttttcagacgctttaagctt-cctttttgttgattcattttctctcta-ttgttctttcagaacctttttaagatgtcaaa 101  Q
    ||||||||||||||| | |||||| ||||||||||| |||| ||||||||  |||| |||| || |||||||| ||  |||||||||||||||||||    
T  28139858 tcttcaggagcagttttcttcagatgctttaagcttcccttgttgttgatgtatttgctctttatttgttcttccaatacctttttaagatgtcaaa 28139954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 96
Target Start/End: Original strand, 30743293 - 30743388
Alignment:
Q  2 ctttgtcttcaggagcagttcttttcagacgctttaagc-ttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatg 96  Q
    |||| |||||||||| |||| | |||||||||||||||| |||||||||| ||| |  ||| |||| |||||||||| ||  ||||||||||||||    
T  30743293 ctttatcttcaggagtagttttcttcagacgctttaagctttcctttttgctgagttctttgctctttattgttcttccaagacctttttaagatg 30743388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 57
Target Start/End: Complemental strand, 12352684 - 12352635
Alignment:
Q  8 cttcaggagcagttcttttcagacgctttaagcttcctttttgttgattc 57  Q
    ||||||||||| |||| |||||| |||| |||||||||||||||||||||    
T  12352684 cttcaggagcacttctcttcagatgcttcaagcttcctttttgttgattc 12352635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 55
Target Start/End: Original strand, 10849054 - 10849102
Alignment:
Q  8 cttcaggagcagttcttttcagacgctttaagctt-cctttttgttgat 55  Q
    |||||||||||||| | |||||||||||||||||| |||||||||||||    
T  10849054 cttcaggagcagttttcttcagacgctttaagcttccctttttgttgat 10849102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 101
Target Start/End: Complemental strand, 25930027 - 25929933
Alignment:
Q  8 cttcaggagcagttcttttcagacgctttaagcttcc-tttttgttgattcattttctctcta-ttgttctttcagaacctttttaagatgtcaaa 101  Q
    ||||| |||||||| | |||||||||||||| ||||| |||||||||||  |||| |||| || ||||||||||| |  |||||||||||||||||    
T  25930027 cttcaagagcagttttcttcagacgctttaaccttccatttttgttgatgtatttgctctttacttgttctttca-agactttttaagatgtcaaa 25929933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 8 - 57
Target Start/End: Complemental strand, 21198887 - 21198838
Alignment:
Q  8 cttcaggagcagttcttttcagacgctttaagcttcctttttgttgattc 57  Q
    |||||||||||||  | |||||| |||| |||||||||||||||||||||    
T  21198887 cttcaggagcagtattcttcagatgcttcaagcttcctttttgttgattc 21198838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 56
Target Start/End: Original strand, 6499520 - 6499556
Alignment:
Q  20 ttcttttcagacgctttaagcttcctttttgttgatt 56  Q
    ||||||||||| |||| ||||||||||||||||||||    
T  6499520 ttcttttcagatgcttcaagcttcctttttgttgatt 6499556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1331 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold1331
Description:

Target: scaffold1331; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 436 - 336
Alignment:
Q  1 actttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaa 100  Q
    |||||| |||||||||||||| | ||||||||||||||||||||||||| ||||||||||| |||| | |||||||| || |||||||||||||||||||    
T  436 actttgccttcaggagcagttttcttcagacgctttaagcttcctttttattgattcatttgctctttgttgttcttccaaaacctttttaagatgtcaa 337  T
Q  101 a 101  Q
    |    
T  336 a 336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 89897 - 89797
Alignment:
Q  1 actttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaa 100  Q
    ||||||||||||||| || || | ||||||||||||||||||||||||||||||||| ||| ||||||||||||||| ||  ||||||||||||||||||    
T  89897 actttgtcttcaggaacaattttcttcagacgctttaagcttcctttttgttgattcctttgctctctattgttcttccaagacctttttaagatgtcaa 89798  T
Q  101 a 101  Q
    |    
T  89797 a 89797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0227 (Bit Score: 62; Significance: 7e-27; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 8 - 101
Target Start/End: Original strand, 22952 - 23045
Alignment:
Q  8 cttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaa 101  Q
    ||||||||| |||||| ||||||||||||||||||| ||||||||||||| ||| ||||||||||||||| ||  |||||||||||||||||||    
T  22952 cttcaggagtagttctcttcagacgctttaagcttcatttttgttgattcttttgctctctattgttcttccaagacctttttaagatgtcaaa 23045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 61; Significance: 3e-26; HSPs: 3)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 212638 - 212738
Alignment:
Q  1 actttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaa 100  Q
    |||||| ||||||||||| |||| |||||||| || ||||||||||||||||||||| ||  |||||| |||||||| ||||||||||||||||||||||    
T  212638 actttgacttcaggagcacttctcttcagacgtttcaagcttcctttttgttgattccttagctctcttttgttcttccagaacctttttaagatgtcaa 212737  T
Q  101 a 101  Q
    |    
T  212738 a 212738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 55
Target Start/End: Complemental strand, 246064 - 246016
Alignment:
Q  8 cttcaggagcagttcttttcagacgctttaagctt-cctttttgttgat 55  Q
    |||||||||||||| | |||||||||||||||||| |||||||||||||    
T  246064 cttcaggagcagttttcttcagacgctttaagcttccctttttgttgat 246016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 77
Target Start/End: Complemental strand, 6026 - 5952
Alignment:
Q  3 tttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctt 77  Q
    |||||||||||||||| |||  |||||| |||| ||| || |||||||||||||  ||| |||||| ||||||||    
T  6026 tttgtcttcaggagcacttcgcttcagatgcttcaagttttctttttgttgatttctttgctctcttttgttctt 5952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0485 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0485
Description:

Target: scaffold0485; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 8 - 101
Target Start/End: Complemental strand, 9195 - 9103
Alignment:
Q  8 cttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaa 101  Q
    |||||||| || |||| ||||||||||| |||||||||||| |||||||||||| |||||| |||||||| |||||||| ||||||||||||||    
T  9195 cttcaggatcacttctcttcagacgcttcaagcttcctttt-gttgattcatttgctctcttttgttcttccagaacctatttaagatgtcaaa 9103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 27271 - 27145
Alignment:
Q  1 actttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaa 100  Q
    |||||| |||||| |||| |||| |||||| |||| ||||||||||||||||||||| ||| |||||| ||||| ||||||||||| |||||||||| |     
T  27271 actttgccttcagaagcacttctcttcagatgcttcaagcttcctttttgttgattcctttgctctcttttgttatttcagaacctatttaagatgttag 27172  T
Q  101 annnnnnnctatggtcctgtacacttg 127  Q
    |       |||||||||||||||||||    
T  27171 atatttttctatggtcctgtacacttg 27145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 8 - 101
Target Start/End: Complemental strand, 20790 - 20697
Alignment:
Q  8 cttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaa 101  Q
    ||||||||||| |||| ||||||||||| || |||||||||||||||||| ||  |||||| |||||||| |||||||| ||||||||||||||    
T  20790 cttcaggagcacttctcttcagacgcttcaaacttcctttttgttgattccttagctctcttttgttcttccagaacctatttaagatgtcaaa 20697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 2 - 101
Target Start/End: Complemental strand, 215306 - 215206
Alignment:
Q  2 ctttgtcttcaggagcagttcttttcagacgctttaagctt-cctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaa 100  Q
    |||| ||||||||||||||| | |||||||||||||||||| ||||||||||||||| ||| |||| |||||||||| ||  | ||||||||||||||||    
T  215306 ctttatcttcaggagcagttttcttcagacgctttaagcttccctttttgttgattcctttgctctttattgttcttccaagatctttttaagatgtcaa 215207  T
Q  101 a 101  Q
    |    
T  215206 a 215206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 8 - 127
Target Start/End: Complemental strand, 6528 - 6408
Alignment:
Q  8 cttcaggagcagttcttttcagacgctttaagcttcc-tttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaannnnn 106  Q
    |||||||||||||| | |||||||||||||||||||| ||||||||||||| ||| |||| |||||||||| ||  ||||||||||||| |||||         
T  6528 cttcaggagcagttttcttcagacgctttaagcttccctttttgttgattcctttgctctttattgttcttccaagacctttttaagatatcaaattttt 6429  T
Q  107 nnctatggtcctgtacacttg 127  Q
      |||| ||||||||||||||    
T  6428 gtctatagtcctgtacacttg 6408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0359 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0359
Description:

Target: scaffold0359; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 8 - 127
Target Start/End: Complemental strand, 5511 - 5391
Alignment:
Q  8 cttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctc-tattgttctttcagaacctttttaagatgtcaaannnnn 106  Q
    ||||||||||| |||| ||||||||||| ||| |||||||| |||||||||||| ||||| | |||||||| |||||||| ||||||||||||||         
T  5511 cttcaggagcacttctcttcagacgcttcaaggttccttttagttgattcatttgctctcattttgttcttccagaacctatttaagatgtcaaattttt 5412  T
Q  107 nnctatggtcctgtacacttg 127  Q
      |||||||||||||| ||||    
T  5411 gtctatggtcctgtacgcttg 5391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 52; Significance: 6e-21; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 3 - 86
Target Start/End: Original strand, 8183 - 8266
Alignment:
Q  3 tttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 86  Q
    |||||||||||||||| |||| ||||||||| |||||||| |||||||||||||| ||| |||||| |||||||| ||||||||    
T  8183 tttgtcttcaggagcacttctcttcagacgccttaagcttactttttgttgattcctttgctctcttttgttcttccagaacct 8266  T

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Target: scaffold0026; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 3 - 127
Target Start/End: Original strand, 60302 - 60426
Alignment:
Q  3 tttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaan 102  Q
    |||||||||| ||||| |||| ||||||||| ||||||||| ||||||||||||| ||| |||||| |||||||| ||||||||  | | |||||||||     
T  60302 tttgtcttcaagagcatttctcttcagacgccttaagcttcatttttgttgattcctttgctctcttttgttcttccagaacctaataatgatgtcaaat 60401  T
Q  103 nnnnnnctatggtcctgtacacttg 127  Q
          |||||||||||||||||||    
T  60402 ttttgtctatggtcctgtacacttg 60426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 10078 - 10204
Alignment:
Q  1 actttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaa 100  Q
    |||||| |||||| |||| |||| |||||| |||| |||||||||||||||||||||  || |||||| ||||||||||||||||| || ||||| ||||    
T  10078 actttgacttcagaagcatttctcttcagatgcttcaagcttcctttttgttgattccattcctctcttttgttctttcagaacctattgaagatatcaa 10177  T
Q  101 annnnnnnctatggtcctgtacacttg 127  Q
    |       |||||||| ||||||||||    
T  10178 atttttgtctatggtcatgtacacttg 10204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 39696 - 39781
Alignment:
Q  1 actttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 86  Q
    |||||| ||||||||||| |||| |||||| |||| ||||||||||||||||||||| ||| |||||| |||||||| ||||||||    
T  39696 actttgacttcaggagcacttctcttcagatgcttcaagcttcctttttgttgattcctttgctctcttttgttcttccagaacct 39781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 137756 - 137841
Alignment:
Q  1 actttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 86  Q
    |||||| ||||||||||| |||| |||||| |||| ||||||||||||||||||||| ||| |||||| |||||||| ||||||||    
T  137756 actttgacttcaggagcacttctcttcagatgcttcaagcttcctttttgttgattcctttgctctcttttgttcttccagaacct 137841  T

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Target: scaffold0452 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0452
Description:

Target: scaffold0452; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 2 - 101
Target Start/End: Complemental strand, 1693 - 1593
Alignment:
Q  2 ctttgtcttcaggagcagttcttttcagacgctttaagctt-cctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaa 100  Q
    |||| ||||||||||||||| | |||||||||||||||||| ||||||||||||||| ||| |||| ||||||||||  |  ||||||||||||| ||||    
T  1693 ctttatcttcaggagcagttttcttcagacgctttaagcttccctttttgttgattcctttgctctttattgttcttctaagacctttttaagatatcaa 1594  T
Q  101 a 101  Q
    |    
T  1593 a 1593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0426 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0426
Description:

Target: scaffold0426; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 3 - 86
Target Start/End: Original strand, 13898 - 13981
Alignment:
Q  3 tttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 86  Q
    |||||||||||||||| |||| ||| ||||| |||||||||||||| |||||||| ||| |||||| |||||||| ||||||||    
T  13898 tttgtcttcaggagcacttctcttctgacgcattaagcttccttttcgttgattcctttgctctcttttgttcttccagaacct 13981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 7 - 101
Target Start/End: Complemental strand, 78185 - 78090
Alignment:
Q  7 tcttcaggagcagttcttttcagacgctttaagctt-cctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaa 101  Q
    ||||||||||||||| | |||||||||||||| ||| ||||||||||||||| ||| |||| |||||||||| ||  | |||||||||||||||||    
T  78185 tcttcaggagcagttttcttcagacgctttaatctttcctttttgttgattcctttgctctttattgttcttccaagatctttttaagatgtcaaa 78090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0861 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0861
Description:

Target: scaffold0861; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 4773 - 4687
Alignment:
Q  1 actttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctt 87  Q
    |||||| ||||||||||| |||| |||||| |||| || |||||||||||||||||| ||| |||||| |||||||| |||||||||    
T  4773 actttgacttcaggagcacttctcttcagatgcttcaaacttcctttttgttgattcctttgctctcttttgttcttccagaacctt 4687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 8 - 86
Target Start/End: Complemental strand, 4829 - 4751
Alignment:
Q  8 cttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 86  Q
    ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||| ||| || ||||||||  |||||||    
T  4829 cttcaggagcacttctcttcagacgctttaagcttcctttttgttgattcctttgctcccttttgttcttctagaacct 4751  T

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Target: scaffold0146 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 8 - 86
Target Start/End: Original strand, 15377 - 15455
Alignment:
Q  8 cttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 86  Q
    ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||  |||||| ||||||||  |||||||    
T  15377 cttcaggagcacttctcttcagacgctttaagcttcctttttgttgattccttagctctcttttgttcttaaagaacct 15455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 8 - 86
Target Start/End: Complemental strand, 25811 - 25733
Alignment:
Q  8 cttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 86  Q
    ||||||||||| |||| ||||||||| |||| |||||||||||||||||| ||| |||||| |||||||| ||||||||    
T  25811 cttcaggagcacttctcttcagacgccttaatcttcctttttgttgattcctttgctctcttttgttcttccagaacct 25733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0479 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0479
Description:

Target: scaffold0479; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 8 - 101
Target Start/End: Original strand, 10228 - 10321
Alignment:
Q  8 cttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaa 101  Q
    ||||||||||| |||| |||||| |||| ||||||||||||| ||||||| ||   ||||| |||||||| |||||||| ||||||||||||||    
T  10228 cttcaggagcacttctcttcagatgcttcaagcttcctttttattgattctttagatctcttttgttcttccagaacctatttaagatgtcaaa 10321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0290 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0290
Description:

Target: scaffold0290; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 18447 - 18362
Alignment:
Q  1 actttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 86  Q
    |||||| ||||||||||| |||| |||||| |||| ||||||||||||||||||||| ||| |||||| |||||||| || |||||    
T  18447 actttgacttcaggagcacttctcttcagatgcttcaagcttcctttttgttgattcctttgctctcttttgttcttccaaaacct 18362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 2 - 101
Target Start/End: Complemental strand, 5411 - 5311
Alignment:
Q  2 ctttgtcttcaggagcagttcttttcagacgctttaagctt-cctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaa 100  Q
    |||| ||||||||||||||| | |||| ||||||||||||| ||||||||||||||| ||| |||| |||||||||| ||  |||||||||| || ||||    
T  5411 ctttatcttcaggagcagttttcttcaaacgctttaagcttccctttttgttgattcctttgctctttattgttcttccaagacctttttaaaatatcaa 5312  T
Q  101 a 101  Q
    |    
T  5311 a 5311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1434 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold1434
Description:

Target: scaffold1434; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 3 - 62
Target Start/End: Complemental strand, 611 - 552
Alignment:
Q  3 tttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcatttt 62  Q
    |||||||||||||||| |||| ||||||| ||||||||||||||||||||||||| ||||    
T  611 tttgtcttcaggagcacttctcttcagacactttaagcttcctttttgttgattcctttt 552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0771 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0771
Description:

Target: scaffold0771; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 3 - 86
Target Start/End: Original strand, 762 - 845
Alignment:
Q  3 tttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 86  Q
    |||| ||||| ||||| |||| |||||| |||||||||||||||||||||||||| ||| |||||| ||||| || ||||||||    
T  762 tttgacttcaagagcacttctcttcagatgctttaagcttcctttttgttgattcctttgctctcttttgtttttccagaacct 845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0411 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0411
Description:

Target: scaffold0411; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 7 - 127
Target Start/End: Original strand, 12501 - 12621
Alignment:
Q  7 tcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaannnnn 106  Q
    |||||||||| | || | |||| | |||| |||||||||||||||||||||  || |||||| |||||||| |||||||| ||||||||||||||         
T  12501 tcttcaggagaacttttattcaaatgcttcaagcttcctttttgttgattccattactctcttttgttcttccagaacctatttaagatgtcaaattttt 12600  T
Q  107 nnctatggtcctgtacacttg 127  Q
      |||||||| ||||||||||    
T  12601 gtctatggtcttgtacacttg 12621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0210
Description:

Target: scaffold0210; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 6 - 93
Target Start/End: Original strand, 1920 - 2007
Alignment:
Q  6 gtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaag 93  Q
    ||||||||||||| |||| | |||| |||||||||||||||||| ||||||| ||| |||||| |||||||| ||| |||| ||||||    
T  1920 gtcttcaggagcacttctctgcagatgctttaagcttcctttttattgattcctttgctctcttttgttcttccaggacctatttaag 2007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 44; Significance: 4e-16; HSPs: 2)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 3 - 86
Target Start/End: Original strand, 32759 - 32842
Alignment:
Q  3 tttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 86  Q
    ||||||||||| |||| || | ||||||||| ||||||||||||||||||||||| ||| |||||| ||||||||  |||||||    
T  32759 tttgtcttcagaagcacttttcttcagacgccttaagcttcctttttgttgattcctttactctcttttgttcttctagaacct 32842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 87
Target Start/End: Original strand, 49605 - 49688
Alignment:
Q  3 tttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctt 87  Q
    |||||||||| ||||| |||| ||| ||||| ||||||||||||||||||||||| ||| |||||| |||||||| ||| |||||    
T  49605 tttgtcttcaagagcacttctcttc-gacgccttaagcttcctttttgttgattcctttgctctcttttgttcttccagcacctt 49688  T

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Target: scaffold0065 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 1988 - 2071
Alignment:
Q  1 actttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaac 84  Q
    |||||| ||||||||||| |||| ||||||| ||||||||||| ||||||||||||| ||  |||||| |||||||| ||||||    
T  1988 actttgacttcaggagcacttctcttcagacactttaagcttcatttttgttgattccttcgctctcttttgttcttccagaac 2071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 8 - 127
Target Start/End: Complemental strand, 60704 - 60585
Alignment:
Q  8 cttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaannnnnn 107  Q
    ||||||||||| |||| ||||||||||| ||||||||||||||||||||| ||  ||  || || ||||||||||||||  | ||||| |||||          
T  60704 cttcaggagcacttctcttcagacgcttcaagcttcctttttgttgattccttagcttcctttttttctttcagaacctaataaagatatcaaatttttg 60605  T
Q  108 nctatggtcctgtacacttg 127  Q
     |||||||||||||||||||    
T  60604 tctatggtcctgtacacttg 60585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0471 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 2 - 101
Target Start/End: Original strand, 3621 - 3722
Alignment:
Q  2 ctttgtcttcaggagcagttcttttcagacgctttaagctt-cctttttgttgattcattttctctcta-ttgttctttcagaacctttttaagatgtca 99  Q
    |||| ||||||||||||||| | ||||||| |||||||||| |||||||||||||  |||| |||| || |||||||| ||  |||||||||||||||||    
T  3621 ctttatcttcaggagcagttttcttcagacactttaagcttccctttttgttgatgtatttgctctttatttgttcttccaatacctttttaagatgtca 3720  T
Q  100 aa 101  Q
    ||    
T  3721 aa 3722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 14946 - 15031
Alignment:
Q  1 actttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 86  Q
    |||||| ||| ||||||| |||| ||||||| ||||||||||| ||||||||||||| ||  |||||| |||||||| ||||||||    
T  14946 actttgacttaaggagcacttctcttcagacactttaagcttcatttttgttgattccttcgctctcttttgttcttccagaacct 15031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 23405 - 23350
Alignment:
Q  1 actttgtcttcaggagcagttcttttcagacgctttaagctt-cctttttgttgat 55  Q
    ||||||||||||||||||||| | |||||||||||||||||| |||||||||||||    
T  23405 actttgtcttcaggagcagttttcttcagacgctttaagcttccctttttgttgat 23350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0527 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 2)
Name: scaffold0527
Description:

Target: scaffold0527; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 8 - 101
Target Start/End: Original strand, 162 - 256
Alignment:
Q  8 cttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctcta-ttgttctttcagaacctttttaagatgtcaaa 101  Q
    |||||||||||||| | |||||||||||||||||||| ||||||||||  |||| |||| || |||||||| ||  ||| ||||||| |||||||    
T  162 cttcaggagcagttttcttcagacgctttaagcttcccttttgttgatgtatttgctctttatttgttcttccaagaccattttaagttgtcaaa 256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0527; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 8 - 101
Target Start/End: Original strand, 8225 - 8319
Alignment:
Q  8 cttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctcta-ttgttctttcagaacctttttaagatgtcaaa 101  Q
    |||||||||||||| | |||||||||||||||||||| ||||||||||  |||| |||| || |||||||| ||  ||| ||||||| |||||||    
T  8225 cttcaggagcagttttcttcagacgctttaagcttcccttttgttgatgtatttgctctttatttgttcttccaagaccattttaagttgtcaaa 8319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 8 - 127
Target Start/End: Complemental strand, 9956 - 9838
Alignment:
Q  8 cttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaannnnnn 107  Q
    ||||||||||| |||| |||| |  ||| |||||||||||||||||||||  || |||||| |||||||| ||||| || ||||||||||||||          
T  9956 cttcaggagcacttctcttcatattcttcaagcttcctttttgttgattccattgctctcttttgttcttccagaa-ctatttaagatgtcaaatttttg 9858  T
Q  108 nctatggtcctgtacacttg 127  Q
      ||||||||||||||||||    
T  9857 tttatggtcctgtacacttg 9838  T

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Target: scaffold0120 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 2)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 20 - 127
Target Start/End: Complemental strand, 36583 - 36476
Alignment:
Q  20 ttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaannnnnnnctatggtcctg 119  Q
    |||| |||||| |||| ||||||||||||  |||||||  || |||||| |||||||| || ||||| ||||||||||||||       |||||||||||    
T  36583 ttctcttcagatgcttcaagcttccttttatttgattccattgctctcttttgttcttccataacctatttaagatgtcaaatttttgtctatggtcctg 36484  T
Q  120 tacacttg 127  Q
    ||||||||    
T  36483 tacacttg 36476  T

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Target: scaffold0120; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 20 - 127
Target Start/End: Original strand, 42422 - 42529
Alignment:
Q  20 ttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaannnnnnnctatggtcctg 119  Q
    |||| |||||| |||| ||||||||||||  |||||||  || |||||| |||||||| || ||||| ||||||||||||||       |||||||||||    
T  42422 ttctcttcagatgcttcaagcttccttttatttgattccattgctctcttttgttcttccataacctatttaagatgtcaaatttttgtctatggtcctg 42521  T
Q  120 tacacttg 127  Q
    ||||||||    
T  42522 tacacttg 42529  T

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Target: scaffold0004 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 3)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 8 - 86
Target Start/End: Complemental strand, 377395 - 377317
Alignment:
Q  8 cttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 86  Q
    ||||||||||| | || ||||||| |||||||||||||||| |||||||| ||  |||||| |||||||| ||||||||    
T  377395 cttcaggagcactactcttcagacactttaagcttccttttagttgattccttagctctcttttgttcttccagaacct 377317  T

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Target: scaffold0004; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 8 - 86
Target Start/End: Complemental strand, 30689 - 30612
Alignment:
Q  8 cttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 86  Q
    ||||||||||| || | ||||||||  |||||||||| |||||||||||| ||| |||||| |||||||| ||||||||    
T  30689 cttcaggagcaatt-tcttcagacgtcttaagcttccattttgttgattcctttgctctcttttgttcttccagaacct 30612  T

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Target: scaffold0004; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 86
Target Start/End: Original strand, 220528 - 220607
Alignment:
Q  8 cttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctcta-ttgttctttcagaacct 86  Q
    ||||||||||| || | ||||||||||| ||| |||||||||||||||||  |  ||||| | |||||||||||||||||    
T  220528 cttcaggagcacttttcttcagacgcttcaaggttcctttttgttgattccatagctctcaatttgttctttcagaacct 220607  T

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Target: scaffold0015 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 101
Target Start/End: Original strand, 61090 - 61191
Alignment:
Q  2 ctttgtcttcaggagcagttcttttcagacgctttaagcttc-ctttttgttgattcattttctctcta-ttgttctttcagaacctttttaagatgtca 99  Q
    |||| ||||||||||||||| | |||||| |||||||||| | ||||||||||||  |||| |||| || |||||||| ||  |||||||||||||||||    
T  61090 ctttatcttcaggagcagttttcttcagatgctttaagctccactttttgttgatgtatttgctctttatttgttcttccaagacctttttaagatgtca 61189  T
Q  100 aa 101  Q
    ||    
T  61190 aa 61191  T

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Target: scaffold0035 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 127
Target Start/End: Complemental strand, 19294 - 19174
Alignment:
Q  8 cttcaggagcagttcttttcagacgctttaagcttcct-ttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaannnnn 106  Q
    ||||||||||| |||| ||||||||||| ||||||||| ||||||||| || ||  |||||| |||||||| || |||||  | ||||| |||||         
T  19294 cttcaggagcacttctcttcagacgcttcaagcttccttttttgttgactccttagctctcttttgttcttccataacctaataaagatatcaaattttt 19195  T
Q  107 nnctatggtcctgtacacttg 127  Q
      |||||||||||||||||||    
T  19194 gtctatggtcctgtacacttg 19174  T

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Target: scaffold0035; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 101
Target Start/End: Complemental strand, 98992 - 98901
Alignment:
Q  12 aggagcagttcttttcagacgctttaagcttc-ctttttgttgattcattttctctcta-ttgttctttcagaacctttttaagatgtcaaa 101  Q
    |||||||||| | |||||| |||||||||||| |||||||| |||  |||| |||| || |||||||| ||  |||||||||||||||||||    
T  98992 aggagcagttttcttcagaagctttaagcttcactttttgtcgatgtatttgctctttacttgttcttccaagacctttttaagatgtcaaa 98901  T

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Target: scaffold0607 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0607
Description:

Target: scaffold0607; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 7199 - 7301
Alignment:
Q  1 actttgtcttcaggagcagttcttttcagacgctttaagctt-cctttttgttgattcattttctctcta-ttgttctttcagaacctttttaagatgtc 98  Q
    ||||||||||||| ||||||| | |||||| ||||||||||| |||||| ||||||  |||| |||  || |||||||| ||  ||||||||||||||||    
T  7199 actttgtcttcagtagcagttttcttcagatgctttaagcttcccttttggttgatgtatttgctccttatttgttcttccaagacctttttaagatgtc 7298  T
Q  99 aaa 101  Q
    |||    
T  7299 aaa 7301  T

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Target: scaffold0414 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0414
Description:

Target: scaffold0414; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 101
Target Start/End: Complemental strand, 6958 - 6862
Alignment:
Q  8 cttcaggagcagttcttttcagacgc-tttaagctt-cctttttgttgattcattttctctcta-ttgttctttcagaacctttttaagatgtcaaa 101  Q
    |||||||||||||| | ||||||||| ||||||||| |||||||||||||   ||| |||| || |||||||| ||  |||||||||||||||||||    
T  6958 cttcaggagcagttttcttcagacgcttttaagcttccctttttgttgatgtgtttgctctttatttgttcttccaagacctttttaagatgtcaaa 6862  T

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Target: scaffold0275 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0275
Description:

Target: scaffold0275; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 71
Target Start/End: Original strand, 8576 - 8640
Alignment:
Q  8 cttcaggagcagttcttttcagacgctttaagctt-cctttttgttgattcattttctctctatt 71  Q
    |||||||||||||| | ||||||| |||||||||| |||||||||||||  ||||||||| ||||    
T  8576 cttcaggagcagttttcttcagacactttaagcttccctttttgttgatgtattttctctttatt 8640  T

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Target: scaffold0045 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 101
Target Start/End: Complemental strand, 87420 - 87325
Alignment:
Q  8 cttcaggagcagttcttttcagacgctttaagctt-cctttttgttgattcattttctctcta-ttgttctttcagaacctttttaagatgtcaaa 101  Q
    |||||||||||||| | |||||||||||||||||| |||||||| ||||  | || |||| || |||||||||||  |||  ||||||||||||||    
T  87420 cttcaggagcagttttcttcagacgctttaagcttccctttttgctgatatacttgctctttatttgttctttcaagaccaatttaagatgtcaaa 87325  T

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Target: scaffold0261 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 86
Target Start/End: Complemental strand, 5773 - 5695
Alignment:
Q  8 cttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 86  Q
    ||||| ||||| || | |||||| |||| || |||||||||||||||||| ||  |||||| |||||||| ||||||||    
T  5773 cttcatgagcacttttcttcagatgcttcaaacttcctttttgttgattccttagctctcttttgttcttccagaacct 5695  T

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Target: scaffold0193 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 57
Target Start/End: Original strand, 16066 - 16120
Alignment:
Q  3 tttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattc 57  Q
    |||| |||||||||||  ||| |||||| |||| |||||||||||||||||||||    
T  16066 tttgacttcaggagcacatctcttcagatgcttcaagcttcctttttgttgattc 16120  T

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Target: scaffold0047 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 77
Target Start/End: Original strand, 30507 - 30581
Alignment:
Q  3 tttgtcttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctt 77  Q
    |||||||||||||||| |||  |||||| |||| ||| || |||||||||||||  ||| |||||| ||||||||    
T  30507 tttgtcttcaggagcacttcgcttcagatgcttcaagttttctttttgttgatttctttgctctcttttgttctt 30581  T

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Target: scaffold0395 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0395
Description:

Target: scaffold0395; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 86
Target Start/End: Complemental strand, 13352 - 13275
Alignment:
Q  9 ttcaggagcagttcttttcagacgctttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 86  Q
    |||||||||| |||| |||||| |||| ||||||| ||||||||||||| ||  || ||| ||| | |||||||||||    
T  13352 ttcaggagcacttctcttcagatgcttcaagcttcttttttgttgattctttagctttcttttggtttttcagaacct 13275  T

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Target: scaffold0324 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0324
Description:

Target: scaffold0324; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 8 - 57
Target Start/End: Original strand, 10229 - 10278
Alignment:
Q  8 cttcaggagcagttcttttcagacgctttaagcttcctttttgttgattc 57  Q
    ||||||||||| || | ||||||||||| |||||||||||||||| ||||    
T  10229 cttcaggagcacttttcttcagacgcttcaagcttcctttttgtttattc 10278  T

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Target: scaffold0249 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 55
Target Start/End: Complemental strand, 17592 - 17544
Alignment:
Q  8 cttcaggagcagttcttttcagacgctttaagctt-cctttttgttgat 55  Q
    |||||||| ||||| | |||||||||||||||||| |||||||||||||    
T  17592 cttcaggatcagttttcttcagacgctttaagcttccctttttgttgat 17544  T

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Target: scaffold0011 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 55
Target Start/End: Complemental strand, 65246 - 65198
Alignment:
Q  8 cttcaggagcagttcttttcagacgctttaagctt-cctttttgttgat 55  Q
    |||||| ||||||| | |||||||||||||||||| |||||||||||||    
T  65246 cttcagaagcagttttcttcagacgctttaagcttccctttttgttgat 65198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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