View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12641_low_7 (Length: 201)

Name: NF12641_low_7
Description: NF12641
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12641_low_7
NF12641_low_7
[»] scaffold0058 (1 HSPs)
scaffold0058 (14-183)||(22377-22546)
[»] scaffold0076 (1 HSPs)
scaffold0076 (17-189)||(53297-53469)
[»] scaffold0664 (1 HSPs)
scaffold0664 (14-189)||(7293-7468)
[»] chr2 (14 HSPs)
chr2 (14-189)||(19716428-19716603)
chr2 (14-189)||(19720991-19721166)
chr2 (41-182)||(23097436-23097577)
chr2 (41-177)||(23274477-23274613)
chr2 (14-189)||(12577210-12577385)
chr2 (16-188)||(28350734-28350906)
chr2 (16-186)||(21901396-21901566)
chr2 (50-161)||(20848482-20848592)
chr2 (88-148)||(22462933-22462993)
chr2 (88-148)||(23205245-23205305)
chr2 (88-148)||(23676849-23676909)
chr2 (56-145)||(24657113-24657202)
chr2 (88-148)||(11351163-11351223)
chr2 (88-148)||(23116511-23116571)
[»] scaffold0034 (3 HSPs)
scaffold0034 (17-189)||(11780-11952)
scaffold0034 (41-186)||(1829-1974)
scaffold0034 (47-179)||(70660-70792)
[»] scaffold0067 (4 HSPs)
scaffold0067 (14-189)||(64476-64651)
scaffold0067 (14-189)||(49054-49229)
scaffold0067 (14-189)||(58088-58263)
scaffold0067 (20-177)||(29885-30042)
[»] scaffold0023 (1 HSPs)
scaffold0023 (14-179)||(164285-164450)
[»] scaffold0020 (2 HSPs)
scaffold0020 (14-177)||(98469-98632)
scaffold0020 (14-186)||(176242-176414)
[»] scaffold0222 (2 HSPs)
scaffold0222 (14-189)||(361-536)
scaffold0222 (23-186)||(21078-21241)
[»] chr3 (35 HSPs)
chr3 (14-179)||(31941758-31941923)
chr3 (14-179)||(31692294-31692459)
chr3 (50-189)||(16831627-16831766)
chr3 (14-189)||(16384471-16384646)
chr3 (43-186)||(18131449-18131592)
chr3 (41-185)||(12357630-12357774)
chr3 (41-189)||(17189256-17189404)
chr3 (41-189)||(24190186-24190334)
chr3 (14-186)||(14290634-14290806)
chr3 (41-177)||(17494529-17494664)
chr3 (14-189)||(8744489-8744664)
chr3 (14-189)||(13944879-13945054)
chr3 (50-175)||(10408859-10408984)
chr3 (20-185)||(16825382-16825547)
chr3 (50-175)||(28757210-28757335)
chr3 (50-175)||(47126835-47126960)
chr3 (42-179)||(16326816-16326955)
chr3 (20-186)||(35983042-35983208)
chr3 (44-186)||(11958283-11958425)
chr3 (24-177)||(12181209-12181362)
chr3 (42-106)||(11949107-11949171)
chr3 (89-188)||(15008684-15008783)
chr3 (16-186)||(2037014-2037184)
chr3 (16-186)||(2040755-2040925)
chr3 (16-186)||(14039603-14039773)
chr3 (47-177)||(13317680-13317810)
chr3 (87-190)||(15230531-15230634)
chr3 (87-190)||(15236399-15236502)
chr3 (92-182)||(12857602-12857692)
chr3 (47-132)||(10417201-10417286)
chr3 (50-148)||(11861234-11861332)
chr3 (16-114)||(12501780-12501878)
chr3 (83-148)||(23414941-23415006)
chr3 (89-117)||(13028527-13028555)
chr3 (88-148)||(23079168-23079228)
[»] chr7 (24 HSPs)
chr7 (14-189)||(14283232-14283407)
chr7 (41-182)||(11385294-11385435)
chr7 (14-189)||(14144877-14145052)
chr7 (41-179)||(13676694-13676832)
chr7 (20-177)||(15099473-15099630)
chr7 (20-189)||(12459850-12460019)
chr7 (41-189)||(12798362-12798507)
chr7 (20-175)||(13965540-13965695)
chr7 (20-190)||(13024566-13024736)
chr7 (20-189)||(16947330-16947499)
chr7 (50-175)||(26115462-26115587)
chr7 (14-189)||(18050811-18050986)
chr7 (20-189)||(19150233-19150402)
chr7 (20-189)||(20749632-20749801)
chr7 (50-175)||(26091670-26091795)
chr7 (50-175)||(40924689-40924814)
chr7 (50-168)||(49155553-49155671)
chr7 (41-175)||(21755655-21755789)
chr7 (20-185)||(14261108-14261273)
chr7 (50-182)||(12712528-12712660)
chr7 (87-179)||(12203668-12203760)
chr7 (88-148)||(9591653-9591713)
chr7 (88-148)||(16726362-16726422)
chr7 (88-148)||(17703376-17703436)
[»] chr4 (20 HSPs)
chr4 (14-179)||(16150862-16151027)
chr4 (14-179)||(16155008-16155173)
chr4 (14-189)||(14993238-14993413)
chr4 (50-175)||(7357529-7357654)
chr4 (20-177)||(18259673-18259830)
chr4 (42-179)||(20893285-20893422)
chr4 (14-189)||(51603663-51603838)
chr4 (14-189)||(53750341-53750516)
chr4 (50-175)||(3261679-3261804)
chr4 (50-179)||(11204113-11204242)
chr4 (50-173)||(44658753-44658876)
chr4 (24-177)||(15267012-15267165)
chr4 (14-186)||(15073585-15073757)
chr4 (47-179)||(27903644-27903776)
chr4 (88-175)||(29450422-29450509)
chr4 (89-190)||(8708978-8709079)
chr4 (92-188)||(13879413-13879509)
chr4 (88-148)||(18224125-18224185)
chr4 (88-189)||(14697401-14697502)
chr4 (88-148)||(13513650-13513710)
[»] scaffold0072 (1 HSPs)
scaffold0072 (14-190)||(54302-54478)
[»] scaffold0074 (1 HSPs)
scaffold0074 (14-177)||(15327-15490)
[»] chr6 (22 HSPs)
chr6 (14-177)||(19438092-19438255)
chr6 (14-179)||(14376942-14377107)
chr6 (41-186)||(24515433-24515578)
chr6 (17-189)||(18797783-18797955)
chr6 (41-182)||(21567014-21567155)
chr6 (20-180)||(19456119-19456279)
chr6 (20-180)||(19466264-19466424)
chr6 (20-189)||(10465864-10466033)
chr6 (16-186)||(16813732-16813902)
chr6 (50-175)||(24367526-24367651)
chr6 (89-179)||(8720731-8720821)
chr6 (92-189)||(21474768-21474865)
chr6 (47-190)||(19486309-19486452)
chr6 (16-186)||(25770936-25771106)
chr6 (50-146)||(34642645-34642741)
chr6 (47-129)||(15462459-15462541)
chr6 (88-179)||(30678050-30678141)
chr6 (94-188)||(25958770-25958864)
chr6 (88-177)||(23081587-23081676)
chr6 (56-145)||(27559029-27559118)
chr6 (50-130)||(20010577-20010657)
chr6 (88-148)||(21764976-21765036)
[»] scaffold0010 (3 HSPs)
scaffold0010 (41-189)||(39207-39355)
scaffold0010 (50-148)||(180754-180852)
scaffold0010 (88-148)||(14753-14813)
[»] scaffold0420 (1 HSPs)
scaffold0420 (17-190)||(8872-9045)
[»] scaffold0235 (2 HSPs)
scaffold0235 (17-189)||(8336-8508)
scaffold0235 (17-189)||(18550-18722)
[»] scaffold0004 (3 HSPs)
scaffold0004 (41-189)||(319525-319673)
scaffold0004 (41-189)||(325989-326136)
scaffold0004 (47-179)||(200361-200493)
[»] chr8 (12 HSPs)
chr8 (41-189)||(22027594-22027742)
chr8 (50-189)||(22054191-22054330)
chr8 (20-175)||(16268552-16268707)
chr8 (20-189)||(31413846-31414015)
chr8 (50-175)||(28984239-28984364)
chr8 (13-186)||(21928719-21928892)
chr8 (14-175)||(19985472-19985633)
chr8 (89-188)||(6606784-6606883)
chr8 (90-179)||(20391454-20391543)
chr8 (16-183)||(22374163-22374330)
chr8 (20-179)||(29300750-29300909)
chr8 (88-148)||(30310499-30310559)
[»] chr1 (17 HSPs)
chr1 (25-189)||(20832843-20833007)
chr1 (14-189)||(21738979-21739154)
chr1 (20-175)||(20297661-20297816)
chr1 (14-189)||(21742495-21742670)
chr1 (23-189)||(19857555-19857721)
chr1 (42-179)||(21961327-21961464)
chr1 (20-179)||(24096568-24096727)
chr1 (50-179)||(52989049-52989178)
chr1 (14-177)||(22015700-22015863)
chr1 (50-189)||(31536940-31537079)
chr1 (50-175)||(20074666-20074791)
chr1 (50-175)||(38909783-38909908)
chr1 (50-175)||(48426181-48426306)
chr1 (50-175)||(37680357-37680482)
chr1 (89-188)||(18273114-18273213)
chr1 (88-148)||(21228540-21228600)
chr1 (50-179)||(20853713-20853842)
[»] scaffold0005 (1 HSPs)
scaffold0005 (50-189)||(263517-263656)
[»] scaffold0243 (1 HSPs)
scaffold0243 (14-179)||(9656-9821)
[»] scaffold0348 (2 HSPs)
scaffold0348 (14-189)||(4723-4898)
scaffold0348 (57-183)||(17364-17490)
[»] scaffold0003 (1 HSPs)
scaffold0003 (50-189)||(203672-203811)
[»] scaffold0203 (1 HSPs)
scaffold0203 (16-153)||(764-901)
[»] scaffold0367 (1 HSPs)
scaffold0367 (41-189)||(8895-9043)
[»] scaffold0765 (1 HSPs)
scaffold0765 (50-189)||(6131-6270)
[»] scaffold0239 (1 HSPs)
scaffold0239 (50-189)||(9661-9800)
[»] scaffold0114 (1 HSPs)
scaffold0114 (50-189)||(40349-40488)
[»] scaffold0017 (1 HSPs)
scaffold0017 (15-177)||(4339-4501)
[»] scaffold0167 (1 HSPs)
scaffold0167 (41-179)||(5335-5473)
[»] scaffold1433 (1 HSPs)
scaffold1433 (41-186)||(1188-1333)
[»] scaffold1299 (1 HSPs)
scaffold1299 (41-182)||(1729-1870)
[»] scaffold0404 (1 HSPs)
scaffold0404 (41-186)||(8026-8171)
[»] scaffold0266 (1 HSPs)
scaffold0266 (20-189)||(16898-17067)
[»] scaffold0106 (1 HSPs)
scaffold0106 (20-177)||(34598-34755)
[»] scaffold0476 (1 HSPs)
scaffold0476 (41-180)||(428-567)
[»] chr5 (21 HSPs)
chr5 (20-175)||(20345428-20345583)
chr5 (14-189)||(17266387-17266562)
chr5 (20-179)||(23077968-23078127)
chr5 (51-179)||(22505856-22505984)
chr5 (41-173)||(23563237-23563369)
chr5 (50-175)||(25851248-25851373)
chr5 (50-175)||(14884058-14884183)
chr5 (89-188)||(23669847-23669946)
chr5 (16-186)||(16258092-16258262)
chr5 (89-186)||(22591811-22591908)
chr5 (89-186)||(22595366-22595463)
chr5 (88-189)||(21870331-21870432)
chr5 (88-189)||(21874611-21874712)
chr5 (91-190)||(21983229-21983328)
chr5 (47-132)||(20824626-20824711)
chr5 (47-132)||(28892052-28892137)
chr5 (88-148)||(18782346-18782406)
chr5 (91-179)||(21561088-21561176)
chr5 (92-188)||(43122685-43122781)
chr5 (50-132)||(20779089-20779171)
chr5 (56-148)||(20803797-20803889)
[»] scaffold0317 (1 HSPs)
scaffold0317 (41-179)||(2913-3051)
[»] scaffold0156 (1 HSPs)
scaffold0156 (20-189)||(37200-37369)
[»] scaffold2062 (1 HSPs)
scaffold2062 (17-189)||(746-918)
[»] scaffold0751 (1 HSPs)
scaffold0751 (14-189)||(5436-5610)
[»] scaffold0706 (1 HSPs)
scaffold0706 (41-189)||(5083-5231)
[»] scaffold1530 (1 HSPs)
scaffold1530 (54-189)||(799-934)
[»] scaffold0053 (2 HSPs)
scaffold0053 (41-148)||(65213-65320)
scaffold0053 (14-189)||(62646-62821)
[»] scaffold1426 (1 HSPs)
scaffold1426 (42-175)||(1495-1628)
[»] scaffold0056 (1 HSPs)
scaffold0056 (20-177)||(769-926)
[»] scaffold0054 (1 HSPs)
scaffold0054 (41-189)||(63393-63541)
[»] scaffold0035 (1 HSPs)
scaffold0035 (20-177)||(6066-6223)
[»] scaffold0011 (1 HSPs)
scaffold0011 (20-189)||(153753-153922)
[»] scaffold0001 (1 HSPs)
scaffold0001 (42-179)||(514237-514374)
[»] scaffold0108 (1 HSPs)
scaffold0108 (20-178)||(50366-50524)
[»] scaffold1032 (1 HSPs)
scaffold1032 (20-190)||(688-858)
[»] scaffold0523 (2 HSPs)
scaffold0523 (14-189)||(5695-5870)
scaffold0523 (50-175)||(11631-11756)
[»] scaffold2165 (1 HSPs)
scaffold2165 (42-179)||(687-824)
[»] scaffold0434 (1 HSPs)
scaffold0434 (88-189)||(5776-5877)
[»] scaffold0146 (1 HSPs)
scaffold0146 (20-177)||(170-327)
[»] scaffold0151 (1 HSPs)
scaffold0151 (41-177)||(428-564)
[»] scaffold0026 (1 HSPs)
scaffold0026 (14-186)||(51906-52078)
[»] scaffold0102 (1 HSPs)
scaffold0102 (41-179)||(42980-43118)
[»] scaffold1517 (1 HSPs)
scaffold1517 (37-179)||(1371-1513)
[»] scaffold1845 (1 HSPs)
scaffold1845 (62-179)||(1188-1305)
[»] scaffold0118 (1 HSPs)
scaffold0118 (50-175)||(752-877)
[»] scaffold0041 (1 HSPs)
scaffold0041 (50-175)||(42026-42151)
[»] scaffold0310 (1 HSPs)
scaffold0310 (43-179)||(11261-11397)
[»] scaffold0192 (1 HSPs)
scaffold0192 (14-189)||(29782-29957)
[»] scaffold0708 (1 HSPs)
scaffold0708 (20-190)||(5018-5188)
[»] scaffold0029 (2 HSPs)
scaffold0029 (16-182)||(115819-115985)
scaffold0029 (47-148)||(93809-93910)
[»] scaffold0276 (1 HSPs)
scaffold0276 (50-175)||(23811-23936)
[»] scaffold0190 (1 HSPs)
scaffold0190 (42-179)||(30210-30347)
[»] scaffold0104 (1 HSPs)
scaffold0104 (14-186)||(43296-43468)
[»] scaffold0335 (1 HSPs)
scaffold0335 (20-179)||(4188-4347)
[»] scaffold0046 (1 HSPs)
scaffold0046 (20-186)||(70369-70535)
[»] scaffold0068 (1 HSPs)
scaffold0068 (37-179)||(66992-67134)
[»] scaffold1914 (1 HSPs)
scaffold1914 (50-189)||(1104-1243)
[»] scaffold1056 (1 HSPs)
scaffold1056 (44-186)||(2005-2147)
[»] scaffold0009 (2 HSPs)
scaffold0009 (20-179)||(251880-252039)
scaffold0009 (88-148)||(229767-229827)
[»] scaffold0031 (1 HSPs)
scaffold0031 (71-185)||(115936-116050)
[»] scaffold0261 (4 HSPs)
scaffold0261 (20-124)||(12351-12455)
scaffold0261 (20-124)||(20531-20635)
scaffold0261 (150-189)||(12288-12327)
scaffold0261 (150-189)||(20468-20507)
[»] scaffold0609 (2 HSPs)
scaffold0609 (89-188)||(1269-1368)
scaffold0609 (110-188)||(7908-7986)
[»] scaffold0405 (1 HSPs)
scaffold0405 (14-180)||(5857-6023)
[»] scaffold0188 (1 HSPs)
scaffold0188 (98-179)||(33256-33337)
[»] scaffold0088 (1 HSPs)
scaffold0088 (20-137)||(30195-30312)
[»] scaffold0518 (1 HSPs)
scaffold0518 (123-179)||(2195-2251)
[»] scaffold0490 (1 HSPs)
scaffold0490 (109-189)||(3215-3295)
[»] scaffold0443 (1 HSPs)
scaffold0443 (50-138)||(12088-12176)
[»] scaffold0180 (1 HSPs)
scaffold0180 (93-179)||(30897-30983)
[»] scaffold0865 (1 HSPs)
scaffold0865 (92-189)||(1146-1243)
[»] scaffold0133 (1 HSPs)
scaffold0133 (92-189)||(28159-28256)
[»] scaffold0079 (1 HSPs)
scaffold0079 (56-148)||(36795-36887)
[»] scaffold0309 (1 HSPs)
scaffold0309 (14-113)||(12982-13081)
[»] scaffold0130 (1 HSPs)
scaffold0130 (92-179)||(3776-3863)
[»] scaffold0100 (1 HSPs)
scaffold0100 (88-179)||(16493-16584)
[»] scaffold0161 (1 HSPs)
scaffold0161 (87-176)||(36156-36245)
[»] scaffold0044 (1 HSPs)
scaffold0044 (88-148)||(17489-17549)
[»] scaffold0289 (1 HSPs)
scaffold0289 (70-148)||(99-177)
[»] scaffold0181 (1 HSPs)
scaffold0181 (56-114)||(28877-28935)
[»] scaffold0019 (1 HSPs)
scaffold0019 (88-130)||(171447-171489)
[»] scaffold0605 (1 HSPs)
scaffold0605 (50-179)||(1571-1700)
[»] scaffold0270 (2 HSPs)
scaffold0270 (88-189)||(7202-7303)
scaffold0270 (88-189)||(14332-14433)
[»] scaffold0040 (1 HSPs)
scaffold0040 (88-177)||(18174-18263)
[»] scaffold1881 (1 HSPs)
scaffold1881 (88-148)||(395-455)
[»] scaffold0546 (1 HSPs)
scaffold0546 (88-148)||(208-268)
[»] scaffold0509 (1 HSPs)
scaffold0509 (93-145)||(12162-12214)
[»] scaffold0285 (1 HSPs)
scaffold0285 (88-148)||(5327-5387)
[»] scaffold0109 (1 HSPs)
scaffold0109 (88-148)||(13039-13099)


Alignment Details
Target: scaffold0058 (Bit Score: 142; Significance: 1e-74; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 14 - 183
Target Start/End: Original strand, 22377 - 22546
Alignment:
Q  14 acatcaccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttct 113  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  22377 acatcaccacgcttgcaatcaactagggtgtgtcctttctgaccacacttgaagcatttcttctcatccttagtaaaaacattactcttgtggcctttct 22476  T
Q  114 ctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattcagtct 183  Q
    | || ||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||    
T  22477 cgccacacttgtaacaaacgatctcaacaggagcatctctcctattgggcctcctctcatcattcagtct 22546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 133; Significance: 2e-69; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 133; E-Value: 2e-69
Query Start/End: Original strand, 17 - 189
Target Start/End: Complemental strand, 53469 - 53297
Alignment:
Q  17 tcaccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctc 116  Q
    ||||||||||||||||||| |||| |||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |    
T  53469 tcaccacgcttgcaatcaactaggatgtgtcctttttgaccacacctgaatcatttcttctcatccttagtacaaacattactcttgtggcctttctcgc 53370  T
Q  117 ctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattcagtctctgctt 189  Q
    | |||||||||||||||||| ||||| ||||| |||||||||||||||||||||||||||||| |||||||||    
T  53369 cacacttgtaacaaacgatcccagcaagagcatctctcctattgggcctcctctcatcattcaatctctgctt 53297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0664 (Bit Score: 132; Significance: 9e-69; HSPs: 1)
Name: scaffold0664
Description:

Target: scaffold0664; HSP #1
Raw Score: 132; E-Value: 9e-69
Query Start/End: Original strand, 14 - 189
Target Start/End: Original strand, 7293 - 7468
Alignment:
Q  14 acatcaccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttct 113  Q
    |||||||||||||||||||||  ||| ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  7293 acatcaccacgcttgcaatcagctagagtgtgtcctttctgaccacacctgaagcacttcttctcatctttagtacaaacattactcttgtggcctttct 7392  T
Q  114 ctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattcagtctctgctt 189  Q
    | || |||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||  ||||||||    
T  7393 cgccacacttgtaacaaacaatctcagcaggagcatctctcctattgggcctcctctcatcattcaacctctgctt 7468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 132; Significance: 9e-69; HSPs: 14)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 132; E-Value: 9e-69
Query Start/End: Original strand, 14 - 189
Target Start/End: Complemental strand, 19716603 - 19716428
Alignment:
Q  14 acatcaccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttct 113  Q
    ||||||| |||||||||||||  ||| |||||||||||||||||||||||||| || ||||||||||| |||||||||||||||||||||||||||||||    
T  19716603 acatcactacgcttgcaatcagctagagtgtgtcctttctgaccacacctgaaacacttcttctcatctttagtacaaacattactcttgtggcctttct 19716504  T
Q  114 ctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattcagtctctgctt 189  Q
    | || |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||    
T  19716503 cgccacacttgtaacaaacgatctcagcaggagcatctctcctattgggcctcctctcatcattcaatctctgctt 19716428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 132; E-Value: 9e-69
Query Start/End: Original strand, 14 - 189
Target Start/End: Complemental strand, 19721166 - 19720991
Alignment:
Q  14 acatcaccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttct 113  Q
    ||||||| |||||||||||||  ||| |||||||||||||||||||||||||| || ||||||||||| |||||||||||||||||||||||||||||||    
T  19721166 acatcactacgcttgcaatcagctagagtgtgtcctttctgaccacacctgaaacacttcttctcatctttagtacaaacattactcttgtggcctttct 19721067  T
Q  114 ctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattcagtctctgctt 189  Q
    | || |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||    
T  19721066 cgccacacttgtaacaaacgatctcagcaggagcatctctcctattgggcctcctctcatcattcaatctctgctt 19720991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 41 - 182
Target Start/End: Complemental strand, 23097577 - 23097436
Alignment:
Q  41 gtgtgtcctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcag 140  Q
    ||||||||||||||||||||| ||||||| ||||||| ||| || |||||||||||||| |||||||||||||| || |||||  | ||||| |||||||    
T  23097577 gtgtgtcctttctgaccacacttgaagcacttcttctgatctttggtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatctcag 23097478  T
Q  141 caggagcagctctcctattgggcctcctctcatcattcagtc 182  Q
    |||||||| ||||||| |||||||||||||||||||||||||    
T  23097477 caggagcatctctcctcttgggcctcctctcatcattcagtc 23097436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 41 - 177
Target Start/End: Original strand, 23274477 - 23274613
Alignment:
Q  41 gtgtgtcctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcag 140  Q
    |||||||| ||||| |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| || |||||||  ||||| || ||||    
T  23274477 gtgtgtcccttctgtccacacctgaagcacttcttctcatctttagtacaaacattactcttgtggcctttctcaccacacttgttgcaaacaatttcag 23274576  T
Q  141 caggagcagctctcctattgggcctcctctcatcatt 177  Q
     ||||||| ||||||| ||||||||||||||||||||    
T  23274577 taggagcatctctcctcttgggcctcctctcatcatt 23274613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 14 - 189
Target Start/End: Original strand, 12577210 - 12577385
Alignment:
Q  14 acatcaccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttct 113  Q
    |||||||| |||||||||||   |||  |||| || ||||| ||||| ||||| || |||||||||||||| |||||||| ||||||||||| |||||||    
T  12577210 acatcaccgcgcttgcaatcggctagcatgtgacccttctgtccacatctgaaacacttcttctcatccttggtacaaacgttactcttgtgacctttct 12577309  T
Q  114 ctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattcagtctctgctt 189  Q
    | || |||||  | || || ||||||||||||||| | ||| || | ||||||||||||||||| |||||||||||    
T  12577310 cgccacacttaaagcacactatctcagcaggagcatccctcttactcggcctcctctcatcattaagtctctgctt 12577385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 16 - 188
Target Start/End: Original strand, 28350734 - 28350906
Alignment:
Q  16 atcaccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctct 115  Q
    ||||||||||||||| |||  ||  || || |||||||  ||||| | |||||| || ||||||||   | | ||||||||||||||||||||||||||     
T  28350734 atcaccacgcttgcattcagctatcgtatgccctttcttcccacatcggaagcactttttctcatcaccattgcaaacattactcttgtggcctttctca 28350833  T
Q  116 cctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattcagtctctgct 188  Q
    || |||||||| ||||| |||||||||||| || ||||||| || || |||||||||||||||| ||| ||||    
T  28350834 ccacacttgtagcaaacaatctcagcaggaacatctctcctcttaggtctcctctcatcattcaatctttgct 28350906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 16 - 186
Target Start/End: Original strand, 21901396 - 21901566
Alignment:
Q  16 atcaccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctct 115  Q
    ||||||||||||||| |||  ||  || || |||||||  ||||| | |||||| || ||||||||   | | |||||||||||||||||||| |||||     
T  21901396 atcaccacgcttgcattcagctatcgtatgccctttcttcccacatcggaagcactttttctcatcaccattgcaaacattactcttgtggcccttctca 21901495  T
Q  116 cctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattcagtctctg 186  Q
    || |||||||| ||||| ||||||| |||| || |||| || || || |||||||||||||||| ||||||    
T  21901496 ccacacttgtagcaaacaatctcagtaggaacatctcttctcttaggtctcctctcatcattcaatctctg 21901566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 50 - 161
Target Start/End: Original strand, 20848482 - 20848592
Alignment:
Q  50 ttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcag 149  Q
    |||||||||||||||||||| ||| | |||||  |   ||||||||||||||||||||||||||| || |||||||| | ||| |||||| ||||||||     
T  20848482 ttctgaccacacctgaagcacttcctatcatctcttccacaaacattactcttgtggcctttctcaccacacttgtagc-aacaatctcaacaggagcat 20848580  T
Q  150 ctctcctattgg 161  Q
    ||||||| ||||    
T  20848581 ctctcctcttgg 20848592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 88 - 148
Target Start/End: Complemental strand, 22462993 - 22462933
Alignment:
Q  88 acaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagca 148  Q
    ||||||||||||||||||||||||||| || || ||| ||||||| ||||| |||||||||    
T  22462993 acaaacattactcttgtggcctttctcaccacagttgaaacaaacaatctccgcaggagca 22462933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 148
Target Start/End: Original strand, 23205245 - 23205305
Alignment:
Q  88 acaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagca 148  Q
    ||||||||||||||||||||||||||| || || ||| ||||||| ||||| | |||||||    
T  23205245 acaaacattactcttgtggcctttctcgccacagttgaaacaaacaatctccgaaggagca 23205305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 148
Target Start/End: Original strand, 23676849 - 23676909
Alignment:
Q  88 acaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagca 148  Q
    ||||||||||||||||||||||||||| || || ||| ||||||| ||||| | |||||||    
T  23676849 acaaacattactcttgtggcctttctcgccacagttgaaacaaacaatctccgaaggagca 23676909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 56 - 145
Target Start/End: Complemental strand, 24657202 - 24657113
Alignment:
Q  56 ccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcagga 145  Q
    ||||||| ||| || |||||| | |||| || ||||||| ||||||||||||||||||| || || ||| |||||   ||||||||||||    
T  24657202 ccacaccggaaacacttcttcacctcctcaggacaaacagtactcttgtggcctttctcaccacaattgaaacaagtaatctcagcagga 24657113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 88 - 148
Target Start/End: Complemental strand, 11351223 - 11351163
Alignment:
Q  88 acaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagca 148  Q
    ||||||||| ||||||||||||||||| || || ||| |||| || ||||| |||||||||    
T  11351223 acaaacattgctcttgtggcctttctcaccacaattgaaacagacaatctccgcaggagca 11351163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 88 - 148
Target Start/End: Complemental strand, 23116571 - 23116511
Alignment:
Q  88 acaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagca 148  Q
    ||||||||||||||||||||||||| | || || ||| ||||||| ||||| | |||||||    
T  23116571 acaaacattactcttgtggcctttcccgccacagttgaaacaaacaatctctgaaggagca 23116511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 129; Significance: 6e-67; HSPs: 3)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 17 - 189
Target Start/End: Complemental strand, 11952 - 11780
Alignment:
Q  17 tcaccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctc 116  Q
    ||||||||||||||||||  ||| ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| |    
T  11952 tcaccacgcttgcaatcagctagagtgtgtcctttctgaccacacctgaagcacttcttctcatctttagtacaaacattactcttgtggcctttctcgc 11853  T
Q  117 ctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattcagtctctgctt 189  Q
    | |||||||||||||||||||||| ||||||| ||||||| |||||||||||||||||||| |||||||||||    
T  11852 cacacttgtaacaaacgatctcagtaggagcatctctcctcttgggcctcctctcatcattaagtctctgctt 11780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 94; E-Value: 4e-46
Query Start/End: Original strand, 41 - 186
Target Start/End: Complemental strand, 1974 - 1829
Alignment:
Q  41 gtgtgtcctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcag 140  Q
    ||||||||||||||||||||||||||||| ||||||||||| |||  ||||||||||||||||||||||||||| || |||||||| ||||| || ||||    
T  1974 gtgtgtcctttctgaccacacctgaagcacttcttctcatctttatcacaaacattactcttgtggcctttctcaccacacttgtagcaaacaatttcag 1875  T
Q  141 caggagcagctctcctattgggcctcctctcatcattcagtctctg 186  Q
    |||||||| || |||| ||||||||||||||||||||||| |||||    
T  1874 caggagcatctatcctcttgggcctcctctcatcattcagcctctg 1829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 47 - 179
Target Start/End: Original strand, 70660 - 70792
Alignment:
Q  47 cctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggag 146  Q
    ||||| ||||| || ||||| || ||||||||||| || || || ||||||| ||||||||||||| | || |||||||||||||| |  ||| ||||||    
T  70660 cctttatgaccgcatctgaaacacttcttctcatctttggtgcagacattacccttgtggcctttcgcaccacacttgtaacaaacaacatcaacaggag 70759  T
Q  147 cagctctcctattgggcctcctctcatcattca 179  Q
    || ||||||   | |||| ||||||||||||||    
T  70760 catctctccccctaggccgcctctcatcattca 70792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 124; Significance: 5e-64; HSPs: 4)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 124; E-Value: 5e-64
Query Start/End: Original strand, 14 - 189
Target Start/End: Complemental strand, 64651 - 64476
Alignment:
Q  14 acatcaccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttct 113  Q
    ||||||||||||||||||| |  ||| |||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||    
T  64651 acatcaccacgcttgcaattagctagtgtgtgtcctttctgaccacacctgaaacatttcttctcatccttggtacaaacattactcttgtggcctttct 64552  T
Q  114 ctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattcagtctctgctt 189  Q
    | || |||||||||||||| ||||||||||||||| | |||||||| |||||||| ||||||||||||||||||||    
T  64551 cgccacacttgtaacaaactatctcagcaggagcatccctcctattcggcctcctttcatcattcagtctctgctt 64476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #2
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 14 - 189
Target Start/End: Complemental strand, 49229 - 49054
Alignment:
Q  14 acatcaccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttct 113  Q
    ||||||||||||||||||| |  ||| |||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| ||||    
T  49229 acatcaccacgcttgcaattagctagtgtgtgtcctttctgaccacacctgaaacatttcttctcatccttggtacaaacattactcttgtggcccttct 49130  T
Q  114 ctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattcagtctctgctt 189  Q
    | || |||||||||||||| ||||||||||||||| | |||||||| |||||||| ||||||||||||||||||||    
T  49129 cgccacacttgtaacaaactatctcagcaggagcatccctcctattcggcctcctttcatcattcagtctctgctt 49054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #3
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 14 - 189
Target Start/End: Complemental strand, 58263 - 58088
Alignment:
Q  14 acatcaccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttct 113  Q
    ||||||||||||||||||| |  ||| |||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| ||||    
T  58263 acatcaccacgcttgcaattagctagtgtgtgtcctttctgaccacacctgaaacatttcttctcatccttggtacaaacattactcttgtggcccttct 58164  T
Q  114 ctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattcagtctctgctt 189  Q
    | || |||||||||||||| ||||||||||||||| | |||||||| |||||||| ||||||||||||||||||||    
T  58163 cgccacacttgtaacaaactatctcagcaggagcatccctcctattcggcctcctttcatcattcagtctctgctt 58088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #4
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 20 - 177
Target Start/End: Original strand, 29885 - 30042
Alignment:
Q  20 ccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctc 119  Q
    |||| ||| ||||||  ||| |||||||| || ||||||||||||||||| |||||||||||  ||  |||||| |||||||||||||||||||| || |    
T  29885 ccacacttacaatcagctagagtgtgtcccttttgaccacacctgaagcacttcttctcatctctatcacaaacgttactcttgtggcctttctcaccac 29984  T
Q  120 acttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcatt 177  Q
    ||||| | ||||| || |||| |||| || ||||||| ||||||||||||||||||||    
T  29985 acttgaagcaaactatgtcagtaggaacatctctcctcttgggcctcctctcatcatt 30042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 122; Significance: 8e-63; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 122; E-Value: 8e-63
Query Start/End: Original strand, 14 - 179
Target Start/End: Complemental strand, 164450 - 164285
Alignment:
Q  14 acatcaccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttct 113  Q
    |||| ||||||||||||||||| ||  |||||||||||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||    
T  164450 acattaccacgcttgcaatcaactaaagtgtgtcctttctgaccacacctgaaacacttcttctcatccttagaacaaacattactcttgtggcctttct 164351  T
Q  114 ctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattca 179  Q
    | || |||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  164350 cgccacacttgtaacaaacgatctcagcaggagcgtctctcctattgggcctcctctcatcattca 164285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 120; Significance: 1e-61; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 14 - 177
Target Start/End: Complemental strand, 98632 - 98469
Alignment:
Q  14 acatcaccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttct 113  Q
    |||||||||||||||||||||  ||| |||||||||||||||||||||||||| || ||||||||||| |||||||||||||||||||||||||||||||    
T  98632 acatcaccacgcttgcaatcagctagagtgtgtcctttctgaccacacctgaaacacttcttctcatctttagtacaaacattactcttgtggcctttct 98533  T
Q  114 ctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcatt 177  Q
    | || |||||||||||||||||||||||||||||| ||||||  ||||||||||||||||||||    
T  98532 cgccacacttgtaacaaacgatctcagcaggagcatctctccacttgggcctcctctcatcatt 98469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #2
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 14 - 186
Target Start/End: Original strand, 176242 - 176414
Alignment:
Q  14 acatcaccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttct 113  Q
    |||||||||||||||||||||  ||  |||||||||||||  |||||||| || || |||||||||||      ||| |||||||||||||||||||| |    
T  176242 acatcaccacgcttgcaatcagctaatgtgtgtcctttctttccacacctaaaacacttcttctcatcacggtcacatacattactcttgtggccttttt 176341  T
Q  114 ctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattcagtctctg 186  Q
    | || |||||| |||| || ||||| | ||||||| |||||||  | ||||||||||||||||||||||||||    
T  176342 caccacacttgaaacagacaatctctgtaggagcatctctcctcctaggcctcctctcatcattcagtctctg 176414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222 (Bit Score: 116; Significance: 3e-59; HSPs: 2)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 116; E-Value: 3e-59
Query Start/End: Original strand, 14 - 189
Target Start/End: Complemental strand, 536 - 361
Alignment:
Q  14 acatcaccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttct 113  Q
    |||||||||||||||||||||  |||| ||||||||||||||||||||||||| || |||||||||||||| |||||||||| ||||||||||||||||     
T  536 acatcaccacgcttgcaatcagctaggctgtgtcctttctgaccacacctgaaacacttcttctcatccttggtacaaacatcactcttgtggcctttcc 437  T
Q  114 ctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattcagtctctgctt 189  Q
      || || ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| | |||||||    
T  436 tgccacatttgtaacaaacgatctcagcaggagcatctctcctattgggcctcctctcatcattcaatatctgctt 361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222; HSP #2
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 23 - 186
Target Start/End: Original strand, 21078 - 21241
Alignment:
Q  23 cgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcact 122  Q
    ||||| ||||||| ||  |||||||| ||||| |||||||||||||| ||||||||| | |||||||||||||||||||||||||||||||| || ||||    
T  21078 cgcttacaatcaactaatgtgtgtcccttctgtccacacctgaagcacttcttctcacctttagtacaaacattactcttgtggcctttctcaccacact 21177  T
Q  123 tgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattcagtctctg 186  Q
    |||| ||||| |||||||||| |||| ||||||| ||||||||||||||||||||||| |||||    
T  21178 tgtagcaaacaatctcagcagaagcatctctcctcttgggcctcctctcatcattcagcctctg 21241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 114; Significance: 5e-58; HSPs: 35)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 114; E-Value: 5e-58
Query Start/End: Original strand, 14 - 179
Target Start/End: Original strand, 31941758 - 31941923
Alignment:
Q  14 acatcaccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttct 113  Q
    ||||||||||||||||| |||  ||| |||||||| ||||||||||||||||| || ||||||||||| || ||||||||||||||||||||||||||||    
T  31941758 acatcaccacgcttgcagtcagctagagtgtgtcccttctgaccacacctgaaacacttcttctcatctttggtacaaacattactcttgtggcctttct 31941857  T
Q  114 ctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattca 179  Q
    | || ||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||    
T  31941858 cgccacacttgtaacaaacgatctcagcaggagcatttctcctattgggcctcctctcatcattca 31941923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 102; E-Value: 7e-51
Query Start/End: Original strand, 14 - 179
Target Start/End: Complemental strand, 31692459 - 31692294
Alignment:
Q  14 acatcaccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttct 113  Q
    |||||||||| |||||| |||  ||| |||||||| |||| |||||||||||| || ||||||||||| || ||||||||||||||||||||||||||||    
T  31692459 acatcaccactcttgcagtcagctagagtgtgtcccttctaaccacacctgaaacacttcttctcatctttggtacaaacattactcttgtggcctttct 31692360  T
Q  114 ctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattca 179  Q
    | || ||||||||||||||||||||||||| ||||  |||||||||||||||||||||||||||||    
T  31692359 caccacacttgtaacaaacgatctcagcagaagcatttctcctattgggcctcctctcatcattca 31692294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 50 - 189
Target Start/End: Complemental strand, 16831766 - 16831627
Alignment:
Q  50 ttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcag 149  Q
    |||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||| || |||||  ||||||| |||||||||||||||     
T  16831766 ttctgaccacacctgaagcacttcttctcatccttggtacaaacattactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcat 16831667  T
Q  150 ctctcctattgggcctcctctcatcattcagtctctgctt 189  Q
    |||||||||| ||||||||||||||||| |||||||||||    
T  16831666 ctctcctattcggcctcctctcatcattaagtctctgctt 16831627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 14 - 189
Target Start/End: Complemental strand, 16384646 - 16384471
Alignment:
Q  14 acatcaccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttct 113  Q
    |||||||||||||||||||||   |   |||| || |||||||||||||||||||| |||||||||||||| |||||||| |||||||||||| ||||||    
T  16384646 acatcaccacgcttgcaatcagccaacatgtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggactttct 16384547  T
Q  114 ctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattcagtctctgctt 189  Q
    | || |||||  ||||||| ||||||||||||||| |||||||||| ||||||||||||||||| |||||||||||    
T  16384546 cgccacacttaaaacaaactatctcagcaggagcatctctcctattcggcctcctctcatcattaagtctctgctt 16384471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 43 - 186
Target Start/End: Complemental strand, 18131592 - 18131449
Alignment:
Q  43 gtgtcctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagca 142  Q
    ||||||||||||||||||||||||||| ||||||||||| |||  ||||||||||||||||||||||||||| || |||||||| ||| | |||||| ||    
T  18131592 gtgtcctttctgaccacacctgaagcacttcttctcatctttatcacaaacattactcttgtggcctttctcgccacacttgtagcaatcaatctcaaca 18131493  T
Q  143 ggagcagctctcctattgggcctcctctcatcattcagtctctg 186  Q
    |||||| ||||||| |||||||||||||||| ||||||||||||    
T  18131492 ggagcatctctcctcttgggcctcctctcattattcagtctctg 18131449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 41 - 185
Target Start/End: Complemental strand, 12357774 - 12357630
Alignment:
Q  41 gtgtgtcctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcag 140  Q
    ||||||||||||||||||||||||||||| ||||||||||| |||  ||| |||||||||||||||||||| || || |||||||| ||||| |||||||    
T  12357774 gtgtgtcctttctgaccacacctgaagcacttcttctcatctttatcacagacattactcttgtggcctttttcgccacacttgtagcaaacaatctcag 12357675  T
Q  141 caggagcagctctcctattgggcctcctctcatcattcagtctct 185  Q
    |||||| | ||||||| ||||||||||||||||||||||| ||||    
T  12357674 caggagtatctctcctcttgggcctcctctcatcattcagcctct 12357630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 81; E-Value: 2e-38
Query Start/End: Original strand, 41 - 189
Target Start/End: Original strand, 17189256 - 17189404
Alignment:
Q  41 gtgtgtcctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcag 140  Q
    ||||||||||||||||||||||||||||| ||||||||||| || |||||||| ||||| |||||||||||||| || |||||  ||||||| || |||     
T  17189256 gtgtgtcctttctgaccacacctgaagcacttcttctcatctttggtacaaacgttacttttgtggcctttctcgccacacttaaaacaaacaatatcaa 17189355  T
Q  141 caggagcagctctcctattgggcctcctctcatcattcagtctctgctt 189  Q
    |||||||| ||||||| |||| ||||||||||||||| | |||||||||    
T  17189356 caggagcatctctcctcttggacctcctctcatcattaaatctctgctt 17189404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 81; E-Value: 2e-38
Query Start/End: Original strand, 41 - 189
Target Start/End: Original strand, 24190186 - 24190334
Alignment:
Q  41 gtgtgtcctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcag 140  Q
    ||||||||||||||||||||||||||||| ||||||||||| || |||||||| ||||| |||||||||||||| || |||||  ||||||| || |||     
T  24190186 gtgtgtcctttctgaccacacctgaagcacttcttctcatctttggtacaaacgttacttttgtggcctttctcgccacacttaaaacaaacaatatcaa 24190285  T
Q  141 caggagcagctctcctattgggcctcctctcatcattcagtctctgctt 189  Q
    |||||||| ||||||| |||  ||||||||||||||||| |||||||||    
T  24190286 caggagcatctctcctcttgtacctcctctcatcattcaatctctgctt 24190334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 14 - 186
Target Start/End: Complemental strand, 14290806 - 14290634
Alignment:
Q  14 acatcaccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttct 113  Q
    ||||| |||||||| ||||||  ||  |||||||||||||| |||||||| ||||| |||||||||||   |  ||| ||||||||||||||||||||||    
T  14290806 acatccccacgcttacaatcagctaaagtgtgtcctttctgtccacacctaaagcacttcttctcatctcaatcacacacattactcttgtggcctttct 14290707  T
Q  114 ctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattcagtctctg 186  Q
    | || |||||| | ||||  ||||||| ||||||| ||||||| || |||||||||||||||||||| |||||    
T  14290706 caccacacttgaagcaaataatctcagtaggagcatctctcctcttaggcctcctctcatcattcagcctctg 14290634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 41 - 177
Target Start/End: Original strand, 17494529 - 17494664
Alignment:
Q  41 gtgtgtcctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcag 140  Q
    ||||||||||||||||||||||||| ||| |||||||||||  ||  |||||||||||||||||||||||| || || || ||| | ||||| |||||||    
T  17494529 gtgtgtcctttctgaccacacctga-gcacttcttctcatctctatcacaaacattactcttgtggcctttttcaccacatttgaagcaaacaatctcag 17494627  T
Q  141 caggagcagctctcctattgggcctcctctcatcatt 177  Q
     | ||||| ||||||| ||||||||||||||||||||    
T  17494628 tatgagcatctctcctcttgggcctcctctcatcatt 17494664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 14 - 189
Target Start/End: Complemental strand, 8744664 - 8744489
Alignment:
Q  14 acatcaccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttct 113  Q
    |||||||| |||||||||||   |||  |||| || ||||| ||||| ||||| || |||||||||||||| |||||||| ||||||||||| |||||||    
T  8744664 acatcaccgcgcttgcaatcggctagcatgtgacccttctgtccacatctgaaacacttcttctcatccttggtacaaacgttactcttgtgacctttct 8744565  T
Q  114 ctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattcagtctctgctt 189  Q
    | || |||||  | || || ||||||||||||||| | ||| || | ||||||||||||||||| |||||||||||    
T  8744564 cgccacacttaaagcacactatctcagcaggagcatccctcttactcggcctcctctcatcattaagtctctgctt 8744489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 14 - 189
Target Start/End: Original strand, 13944879 - 13945054
Alignment:
Q  14 acatcaccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttct 113  Q
    |||||||| |||||||||||   |||  |||| || ||||| ||||| ||||| || |||||||||||||| |||||||| ||||||||||| |||||||    
T  13944879 acatcaccgcgcttgcaatcggctagcatgtgacccttctgtccacatctgaaacacttcttctcatccttggtacaaacgttactcttgtgacctttct 13944978  T
Q  114 ctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattcagtctctgctt 189  Q
    | || |||||  | || || ||||||||||||||| | ||| || | ||||||||||||||||| |||||||||||    
T  13944979 cgccacacttaaagcacactatctcagcaggagcatccctcttactcggcctcctctcatcattaagtctctgctt 13945054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 50 - 175
Target Start/End: Original strand, 10408859 - 10408984
Alignment:
Q  50 ttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcag 149  Q
    |||||||||||||||||||| ||| | |||||  |   ||||||||||||||||||||||||||| || || ||||||||||| |||||||| ||||||     
T  10408859 ttctgaccacacctgaagcacttcctatcatctcttccacaaacattactcttgtggcctttctcaccacatttgtaacaaacaatctcagctggagcat 10408958  T
Q  150 ctctcctattgggcctcctctcatca 175  Q
    ||||||| ||||||||||| ||||||    
T  10408959 ctctcctcttgggcctcctatcatca 10408984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 20 - 185
Target Start/End: Complemental strand, 16825547 - 16825382
Alignment:
Q  20 ccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctc 119  Q
    |||||||| ||||||  ||  ||||||||||| | ||||||||||||||| |||||||||||      |||||||||||||||||||||||| || || |    
T  16825547 ccacgcttacaatcagctaaagtgtgtccttttttaccacacctgaagcacttcttctcatcacggtcacaaacattactcttgtggcctttttcaccac 16825448  T
Q  120 acttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattcagtctct 185  Q
    ||||| ||||||| || |||| ||||||| ||||| | ||||||||||||||||| |||| |||||    
T  16825447 acttgaaacaaacaatatcagtaggagcatctctcatcttgggcctcctctcatctttcaatctct 16825382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 50 - 175
Target Start/End: Original strand, 28757210 - 28757335
Alignment:
Q  50 ttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcag 149  Q
    |||||||||||||||||||| ||| | |||||  |   ||||||||||||||||||||||||||| || |||||||| ||||| |||||| ||||||||     
T  28757210 ttctgaccacacctgaagcacttcctatcatctcttccacaaacattactcttgtggcctttctcaccacacttgtagcaaacaatctcaacaggagcat 28757309  T
Q  150 ctctcctattgggcctcctctcatca 175  Q
    ||||||| ||||||||||| ||||||    
T  28757310 ctctcctcttgggcctcctatcatca 28757335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 50 - 175
Target Start/End: Original strand, 47126835 - 47126960
Alignment:
Q  50 ttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcag 149  Q
    |||||||||||||||||||| ||| | |||||  |   ||||||||||||||||||||||||||| || |||||||| ||||| |||||| ||||||||     
T  47126835 ttctgaccacacctgaagcacttcctatcatctcttccacaaacattactcttgtggcctttctcaccacacttgtagcaaacaatctcaacaggagcat 47126934  T
Q  150 ctctcctattgggcctcctctcatca 175  Q
    ||||||| ||||||||||| ||||||    
T  47126935 ctctcctcttgggcctcctatcatca 47126960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 60; E-Value: 8e-26
Query Start/End: Original strand, 42 - 179
Target Start/End: Complemental strand, 16326955 - 16326816
Alignment:
Q  42 tgtgtcctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacga-tctcag 140  Q
    ||||||| ||||||||||||||||| |||||| |||||||  ||  ||||||||| |||||||||||||| || || ||||| |||||||| | ||||||    
T  16326955 tgtgtcccttctgaccacacctgaaacatttcctctcatctctaccacaaacattgctcttgtggcctttttcaccacacttataacaaacaagtctcag 16326856  T
Q  141 caggagcag-ctctcctattgggcctcctctcatcattca 179  Q
    ||||||||| ||||||| ||||| ||||| ||||||||||    
T  16326855 caggagcagtctctcctcttgggtctcctatcatcattca 16326816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 20 - 186
Target Start/End: Original strand, 35983042 - 35983208
Alignment:
Q  20 ccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagcatttcttctcatccttagt-acaaacattactcttgtggcctttctctcct 118  Q
    |||||||||||||||   |  |||||||||||||| ||||| ||||| || ||||||||||| |  || ||| ||||||||||||||||||||||| ||     
T  35983042 ccacgcttgcaatcagccaatgtgtgtcctttctgtccacatctgaaacacttcttctcatc-tcggtcacacacattactcttgtggcctttctcacca 35983140  T
Q  119 cacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattcagtctctg 186  Q
    |||||| | ||||  ||| ||| ||||||| ||||||| || |||||||||||||||||||| |||||    
T  35983141 cacttgaagcaaataatcacagtaggagcatctctcctcttaggcctcctctcatcattcagcctctg 35983208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 44 - 186
Target Start/End: Complemental strand, 11958425 - 11958283
Alignment:
Q  44 tgtcctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcag 143  Q
    ||||||||||||||||||||||| || ||| |||||||  ||  |||| |||| || ||||||||||| || || ||||| |||||||| || |||||||    
T  11958425 tgtcctttctgaccacacctgaaacacttcctctcatctctaccacaagcattgcttttgtggcctttttcaccacacttataacaaacaatttcagcag 11958326  T
Q  144 gagcagctctcctattgggcctcctctcatcattcagtctctg 186  Q
    ||||| ||||||| ||  ||||||| |||||||||| ||||||    
T  11958325 gagcatctctcctcttaagcctcctatcatcattcattctctg 11958283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 24 - 177
Target Start/End: Original strand, 12181209 - 12181362
Alignment:
Q  24 gcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcactt 123  Q
    |||| ||||||  ||| |||||||||||| ||||||| |||||||| |||||||||||  ||  ||| || ||||||||||||||||| || || |||||    
T  12181209 gcttacaatcagctagtgtgtgtcctttccgaccacaactgaagcacttcttctcatctctatcacagactttactcttgtggcctttttcaccacactt 12181308  T
Q  124 gtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcatt 177  Q
    | | ||||  || |||| ||||||| ||||||| |||| |||||||||||||||    
T  12181309 gaagcaaaaaatgtcagtaggagcatctctcctcttggtcctcctctcatcatt 12181362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 42 - 106
Target Start/End: Complemental strand, 11949171 - 11949107
Alignment:
Q  42 tgtgtcctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtgg 106  Q
    ||||||||||||||||||| |||||||| ||||||||||| ||||||||||||||||||||||||    
T  11949171 tgtgtcctttctgaccacatctgaagcacttcttctcatctttagtacaaacattactcttgtgg 11949107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 89 - 188
Target Start/End: Complemental strand, 15008783 - 15008684
Alignment:
Q  89 caaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattcagtctctgct 188  Q
    ||||||||||||||||||||| |||| || |||||||| ||||| |||||||||||| || ||||||| || || |||||||||||||||| ||| ||||    
T  15008783 caaacattactcttgtggcctctctcaccacacttgtagcaaacaatctcagcaggaacatctctcctcttaggtctcctctcatcattcaatctttgct 15008684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 16 - 186
Target Start/End: Complemental strand, 2037184 - 2037014
Alignment:
Q  16 atcaccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctct 115  Q
    ||||||||||||||| |||  ||  || || |||||||  ||||| | |||||| |||||||| ||   | | |||||||||||||||||||| |||||     
T  2037184 atcaccacgcttgcattcagctattgtatgccctttcttcccacatcggaagcacttcttctcctcaccattgcaaacattactcttgtggcccttctca 2037085  T
Q  116 cctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattcagtctctg 186  Q
    || |||||||| ||||| |||||||||||| || ||||||| || || |||||||||||| ||| ||||||    
T  2037084 ccacacttgtagcaaacaatctcagcaggatcatctctcctcttaggtctcctctcatcagtcaatctctg 2037014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 16 - 186
Target Start/End: Complemental strand, 2040925 - 2040755
Alignment:
Q  16 atcaccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctct 115  Q
    ||||||||||||||| |||  ||  || || |||||||  ||||| | |||||| |||||||| ||   | | |||||||||||||||||||| |||||     
T  2040925 atcaccacgcttgcattcagctattgtatgccctttcttcccacatcggaagcacttcttctcctcaccattgcaaacattactcttgtggcccttctca 2040826  T
Q  116 cctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattcagtctctg 186  Q
    || |||||||| ||||| |||||||||||| || ||||||| || || |||||||||||| ||| ||||||    
T  2040825 ccacacttgtagcaaacaatctcagcaggatcatctctcctcttaggtctcctctcatcagtcaatctctg 2040755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 16 - 186
Target Start/End: Original strand, 14039603 - 14039773
Alignment:
Q  16 atcaccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctct 115  Q
    ||||||||||||||| |||  ||  || || |||||||  ||||| | |||||| |||||||| ||   | | |||||||||||||||||||| |||||     
T  14039603 atcaccacgcttgcattcagctattgtatgccctttcttcccacatcggaagcacttcttctcctcaccattgcaaacattactcttgtggcccttctca 14039702  T
Q  116 cctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattcagtctctg 186  Q
    || |||||||| ||||| |||||||||||| || ||||||| || || |||||||||||| ||| ||||||    
T  14039703 ccacacttgtagcaaacaatctcagcaggatcatctctcctcttaggtctcctctcatcagtcaatctctg 14039773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 47 - 177
Target Start/End: Complemental strand, 13317810 - 13317680
Alignment:
Q  47 cctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggag 146  Q
    ||||| |||||||| ||||| || ||||||||||| || || ||||||||||| |||||||||||  | || |||||||||||||| |  ||| ||||||    
T  13317810 cctttttgaccacatctgaaacacttcttctcatctttggtgcaaacattacttttgtggccttttgcaccacacttgtaacaaacaacatcaacaggag 13317711  T
Q  147 cagctctcctattgggcctcctctcatcatt 177  Q
    || ||||||   | |||||||||||||||||    
T  13317710 catctctccccctaggcctcctctcatcatt 13317680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 87 - 190
Target Start/End: Original strand, 15230531 - 15230634
Alignment:
Q  87 tacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattcagtctctg 186  Q
    |||||||||||||||||||||| || || || |||||||| ||||| |||||||||||| || || | || || ||||||||||||||||| | ||| ||    
T  15230531 tacaaacattactcttgtggcccttttcaccacacttgtagcaaacaatctcagcaggaacatcttttctcttaggcctcctctcatcatttaatctttg 15230630  T
Q  187 cttc 190  Q
    ||||    
T  15230631 cttc 15230634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 87 - 190
Target Start/End: Original strand, 15236399 - 15236502
Alignment:
Q  87 tacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattcagtctctg 186  Q
    |||||||||||||||||||||| || || || |||||||| ||||| |||||||||||| || || | || || ||||||||||||||||| | ||| ||    
T  15236399 tacaaacattactcttgtggcccttttcaccacacttgtagcaaacaatctcagcaggaacatcttttctcttaggcctcctctcatcatttaatctttg 15236498  T
Q  187 cttc 190  Q
    ||||    
T  15236499 cttc 15236502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 92 - 182
Target Start/End: Complemental strand, 12857692 - 12857602
Alignment:
Q  92 acattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattcagtc 182  Q
    ||||||||| ||||||| || || || |||||| |||| || ||||||| ||||||| ||||||| || ||||||||||||||||||||||    
T  12857692 acattactcatgtggcccttttcaccacacttgaaacagacaatctcagtaggagcatctctccttttaggcctcctctcatcattcagtc 12857602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 47 - 132
Target Start/End: Complemental strand, 10417286 - 10417201
Alignment:
Q  47 cctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaac 132  Q
    ||||||||||| || ||||| |||||||||||||| | ||| ||| |||||||||||||||| ||| | || || |||||||||||    
T  10417286 cctttctgaccgcatctgaaacatttcttctcatcttgagtgcaagcattactcttgtggcccttcacaccacatttgtaacaaac 10417201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 148
Target Start/End: Original strand, 11861234 - 11861332
Alignment:
Q  50 ttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagca 148  Q
    |||| |||||||| ||| ||||||||| | ||||  | ||||||||| ||||||||||||||||| || || ||| || | || ||||| |||||||||    
T  11861234 ttcttaccacaccagaaacatttcttcacctcctctggacaaacattgctcttgtggcctttctcaccacaattgaaatagacaatctccgcaggagca 11861332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 114
Target Start/End: Original strand, 12501780 - 12501878
Alignment:
Q  16 atcaccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctc 114  Q
    ||||||| |||||||||||  ||  ||||| || ||||  ||||||| ||| ||||||||  | |||| || ||||||||| |||||||||||||||||    
T  12501780 atcaccatgcttgcaatcagctaatgtgtgacccttcttgccacaccggaaacatttctttacctcctcaggacaaacattgctcttgtggcctttctc 12501878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 83 - 148
Target Start/End: Complemental strand, 23415006 - 23414941
Alignment:
Q  83 ttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagca 148  Q
    |||| ||||||||||||||||||||||||||| ||  | ||| |||| || ||||| |||||||||    
T  23415006 ttaggacaaacattactcttgtggcctttctcgccatagttgaaacagacaatctccgcaggagca 23414941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 117
Target Start/End: Complemental strand, 13028555 - 13028527
Alignment:
Q  89 caaacattactcttgtggcctttctctcc 117  Q
    |||||||||||||||||||||||||||||    
T  13028555 caaacattactcttgtggcctttctctcc 13028527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 88 - 148
Target Start/End: Complemental strand, 23079228 - 23079168
Alignment:
Q  88 acaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagca 148  Q
    ||||||||| ||||||||||||||||| || || ||  ||||||| ||| |||||||||||    
T  23079228 acaaacattgctcttgtggcctttctcaccacaattaaaacaaacaatcacagcaggagca 23079168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 112; Significance: 8e-57; HSPs: 24)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 112; E-Value: 8e-57
Query Start/End: Original strand, 14 - 189
Target Start/End: Complemental strand, 14283407 - 14283232
Alignment:
Q  14 acatcaccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttct 113  Q
    |||||||||||||||||||||  ||  ||||| || |||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||    
T  14283407 acatcaccacgcttgcaatcagctaatgtgtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacattactcttgtggcctttct 14283308  T
Q  114 ctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattcagtctctgctt 189  Q
    | || |||||||||||||| | ||||||||||||| ||||||||  |||||||||||||||||| |||||||||||    
T  14283307 cgccacacttgtaacaaacaacctcagcaggagcatctctcctaacgggcctcctctcatcattgagtctctgctt 14283232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 94; E-Value: 4e-46
Query Start/End: Original strand, 41 - 182
Target Start/End: Complemental strand, 11385435 - 11385294
Alignment:
Q  41 gtgtgtcctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcag 140  Q
    ||||||||||||||||||||||||||||| ||||||||||| || |||||||||||||| |||||||||||||| || ||||| || ||||| |||||||    
T  11385435 gtgtgtcctttctgaccacacctgaagcacttcttctcatctttggtacaaacattacttttgtggcctttctcgccacacttatagcaaactatctcag 11385336  T
Q  141 caggagcagctctcctattgggcctcctctcatcattcagtc 182  Q
    |||||||| ||||||| |||||||| ||||||||||||||||    
T  11385335 caggagcatctctcctcttgggccttctctcatcattcagtc 11385294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 14 - 189
Target Start/End: Original strand, 14144877 - 14145052
Alignment:
Q  14 acatcaccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttct 113  Q
    |||||||||||||||||||||  ||    ||| || || ||||||||||||||||| |||||||| ||||| |||||||| |||||||||||||||||||    
T  14144877 acatcaccacgcttgcaatcagctaacacgtgacccttttgaccacacctgaagcacttcttctcctccttggtacaaacgttactcttgtggcctttct 14144976  T
Q  114 ctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattcagtctctgctt 189  Q
    | ||  ||||  ||||||| ||||||||||||||| |||||||||  ||||||||||||||||| |||||||||||    
T  14144977 cgccatacttaaaacaaactatctcagcaggagcatctctcctatatggcctcctctcatcattaagtctctgctt 14145052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 41 - 179
Target Start/End: Original strand, 13676694 - 13676832
Alignment:
Q  41 gtgtgtcctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcag 140  Q
    |||||||| ||||| |||||||||||| | ||||||||||| |||  ||||||||||||||||||||||||||  || |||||||| ||||| ||||||     
T  13676694 gtgtgtcccttctgtccacacctgaagtacttcttctcatctttatcacaaacattactcttgtggcctttcttaccacacttgtagcaaacaatctcaa 13676793  T
Q  141 caggagcagctctcctattgggcctcctctcatcattca 179  Q
    |||||||| ||||||| ||||||||||||||||||||||    
T  13676794 caggagcatctctcctcttgggcctcctctcatcattca 13676832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 20 - 177
Target Start/End: Complemental strand, 15099630 - 15099473
Alignment:
Q  20 ccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctc 119  Q
    |||||||| ||||||  ||| |||||||| |||||||||||||||||||| |||||||||||  ||  |||||| |||||||||||||||||||| || |    
T  15099630 ccacgcttacaatcatctagagtgtgtcccttctgaccacacctgaagcacttcttctcatctctatcacaaacgttactcttgtggcctttctcaccac 15099531  T
Q  120 acttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcatt 177  Q
    ||||| | ||||| || |||| ||||||| ||||||| |||||||||||| |||||||    
T  15099530 acttgaagcaaactatgtcagtaggagcatctctcctcttgggcctcctcccatcatt 15099473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 20 - 189
Target Start/End: Original strand, 12459850 - 12460019
Alignment:
Q  20 ccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctc 119  Q
    |||||||| || |||  |||||||||||| |||||||||||||| || |||||| |||||||  ||  |||| |||| |||||||||||||| || || |    
T  12459850 ccacgcttacattcagctagggtgtgtcccttctgaccacacctaaaacatttcctctcatctctaccacaagcattgctcttgtggcctttttcaccac 12459949  T
Q  120 acttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattcagtctctgctt 189  Q
    |||||||||| || |||||||||||| || ||||||| ||||||||||| |||||||||| | |||||||    
T  12459950 acttgtaacagacaatctcagcaggaacatctctcctcttgggcctcctatcatcattcattttctgctt 12460019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 41 - 189
Target Start/End: Complemental strand, 12798507 - 12798362
Alignment:
Q  41 gtgtgtcctttctgaccacacctgaagcatttcttctcatccttagt-acaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctca 139  Q
    ||||||||||||||||||||||||||||| ||||||||||| |  || ||||||||||||||||||||||||   ||| |||||| ||||||| || |||    
T  12798507 gtgtgtcctttctgaccacacctgaagcacttcttctcatc-tcggtcacaaacattactcttgtggccttt---tccacacttgaaacaaacaatatca 12798412  T
Q  140 gcaggagcagctctcctattgggcctcctctcatcattcagtctctgctt 189  Q
    | | ||||| ||||||| ||| |||||||||||||||||| |||||||||    
T  12798411 gtatgagcatctctcctcttgagcctcctctcatcattcaatctctgctt 12798362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 20 - 175
Target Start/End: Complemental strand, 13965695 - 13965540
Alignment:
Q  20 ccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctc 119  Q
    ||||||||||| |||  |||  |||| || |||||||||||||||||||||||  | ||||| |||  ||||||||||||||||||| ||||||| || |    
T  13965695 ccacgcttgcattcagctagactgtgacccttctgaccacacctgaagcattttctatcatctttaccacaaacattactcttgtggtctttctcaccac 13965596  T
Q  120 acttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatca 175  Q
    ||||||| ||| | ||||||||||||||| ||||||| ||||||||||| ||||||    
T  13965595 acttgtagcaatcaatctcagcaggagcatctctcctcttgggcctcctatcatca 13965540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 20 - 190
Target Start/End: Original strand, 13024566 - 13024736
Alignment:
Q  20 ccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctc 119  Q
    |||||||| || |||  ||||||||||||||||| |||||||||||| |||||| ||||||   ||  | || |||| || ||||||||||| || || |    
T  13024566 ccacgcttacattcagctagggtgtgtcctttctaaccacacctgaaacatttcctctcatatctaccataagcattgcttttgtggcctttttcaccac 13024665  T
Q  120 acttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattcagtctctgcttc 190  Q
    ||||||||||||| || |||||||||||| ||||||| ||||||||||| ||||||||||  |||||||||    
T  13024666 acttgtaacaaacaatttcagcaggagcatctctcctcttgggcctcctatcatcattcatcctctgcttc 13024736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 20 - 189
Target Start/End: Complemental strand, 16947499 - 16947330
Alignment:
Q  20 ccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctc 119  Q
    |||||||| || |||  ||| ||||||||||||||||||||||| |  || ||| |||||||  ||  |||| ||||||||||||||||||| || || |    
T  16947499 ccacgcttacattcagctagtgtgtgtcctttctgaccacacctaacacacttcctctcatctctaccacaagcattactcttgtggcctttttcaccac 16947400  T
Q  120 acttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattcagtctctgctt 189  Q
    ||||||||||||| || ||| | |||||| ||||||| |||||||| ||||||||||||| |||||||||    
T  16947399 acttgtaacaaacaatttcaactggagcatctctcctcttgggccttctctcatcattcattctctgctt 16947330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 50 - 175
Target Start/End: Complemental strand, 26115587 - 26115462
Alignment:
Q  50 ttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcag 149  Q
    |||||||||||||||||||| ||| | |||||  |   ||||||||||||||||||||||||||| || |||||||||||||| |||||||| ||||||     
T  26115587 ttctgaccacacctgaagcacttcctatcatctcttccacaaacattactcttgtggcctttctcaccacacttgtaacaaacaatctcagccggagcat 26115488  T
Q  150 ctctcctattgggcctcctctcatca 175  Q
    ||||||| ||||||||||| ||||||    
T  26115487 ctctcctcttgggcctcctatcatca 26115462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 14 - 189
Target Start/End: Complemental strand, 18050986 - 18050811
Alignment:
Q  14 acatcaccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttct 113  Q
    |||||||| |||||||||||   |||  |||| || ||||| ||||| ||||| || |||||||||||||| |||||||| ||||||||||| |||||||    
T  18050986 acatcaccgcgcttgcaatcggctagcatgtgacccttctgtccacatctgaaacacttcttctcatccttggtacaaacgttactcttgtgacctttct 18050887  T
Q  114 ctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattcagtctctgctt 189  Q
    | || |||||  | || || ||||||||||||||| | ||| || | ||||||||||||||||| |||||||||||    
T  18050886 cgccacacttaaagcacactatctcagcaggagcatccctcttactcggcctcctctcatcattaagtctctgctt 18050811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 20 - 189
Target Start/End: Original strand, 19150233 - 19150402
Alignment:
Q  20 ccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctc 119  Q
    |||||||||||||||   |  ||||||||||||||||||||||| ||||| ||||||| |||   |  ||| |||||||| |||||||||||||| || |    
T  19150233 ccacgcttgcaatcagccaatgtgtgtcctttctgaccacacctaaagcacttcttctgatctcgatcacacacattactgttgtggcctttctcaccac 19150332  T
Q  120 acttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattcagtctctgctt 189  Q
    ||||| | ||||| || |||| ||||||| ||||||| || |||||||||||||||||||  ||||||||    
T  19150333 acttgaagcaaacaatatcagtaggagcatctctcctcttaggcctcctctcatcattcaacctctgctt 19150402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 20 - 189
Target Start/End: Original strand, 20749632 - 20749801
Alignment:
Q  20 ccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctc 119  Q
    |||||||||||||||   |  ||||||||||||||||||||||| ||||| ||||||| |||   |  ||| |||||||| |||||||||||||| || |    
T  20749632 ccacgcttgcaatcagccaatgtgtgtcctttctgaccacacctaaagcacttcttctgatctcgatcacacacattactgttgtggcctttctcaccac 20749731  T
Q  120 acttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattcagtctctgctt 189  Q
    ||||| | ||||| || |||| ||||||| ||||||| || |||||||||||||||||||  ||||||||    
T  20749732 acttgaagcaaacaatatcagtaggagcatctctcctcttaggcctcctctcatcattcaacctctgctt 20749801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 50 - 175
Target Start/End: Complemental strand, 26091795 - 26091670
Alignment:
Q  50 ttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcag 149  Q
    |||||||||||||||||||| ||| | |||||  |   ||||||||||||||||||||||||||| || |||||||| ||||| |||||| ||||||||     
T  26091795 ttctgaccacacctgaagcacttcctatcatctcttccacaaacattactcttgtggcctttctcaccacacttgtagcaaacaatctcaacaggagcat 26091696  T
Q  150 ctctcctattgggcctcctctcatca 175  Q
    ||||||| ||||||||||| ||||||    
T  26091695 ctctcctcttgggcctcctatcatca 26091670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 50 - 175
Target Start/End: Complemental strand, 40924814 - 40924689
Alignment:
Q  50 ttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcag 149  Q
    |||||||||||||||||||| ||| | |||||  |   ||||||||||||||||||||||||||| || |||||||| ||||| |||||| ||||||||     
T  40924814 ttctgaccacacctgaagcacttcctatcatctcttccacaaacattactcttgtggcctttctcaccacacttgtagcaaacaatctcaacaggagcat 40924715  T
Q  150 ctctcctattgggcctcctctcatca 175  Q
    ||||||| ||||||||||| ||||||    
T  40924714 ctctcctcttgggcctcctatcatca 40924689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 50 - 168
Target Start/End: Original strand, 49155553 - 49155671
Alignment:
Q  50 ttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcag 149  Q
    |||||||||||||||||||| ||| | |||||  |   ||||||||||||||||||||||||||| || |||||||| ||||| |||||| ||||||||     
T  49155553 ttctgaccacacctgaagcacttcctatcatctcttccacaaacattactcttgtggcctttctcaccacacttgtagcaaacaatctcaacaggagcat 49155652  T
Q  150 ctctcctattgggcctcct 168  Q
    ||||||| |||||||||||    
T  49155653 ctctcctcttgggcctcct 49155671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 41 - 175
Target Start/End: Original strand, 21755655 - 21755789
Alignment:
Q  41 gtgtgtcctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcag 140  Q
    ||||| || ||||||||||||||||| || ||| ||||||| |||  ||||||||| |||||||||||||| || || |||||||||||||| |||||||    
T  21755655 gtgtgacccttctgaccacacctgaaacacttcctctcatctttaccacaaacattgctcttgtggcctttttcaccacacttgtaacaaacaatctcag 21755754  T
Q  141 caggagcagctctcctattgggcctcctctcatca 175  Q
      |||||| ||||||| || |||||| | ||||||    
T  21755755 agggagcatctctcctcttaggcctcatgtcatca 21755789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 20 - 185
Target Start/End: Complemental strand, 14261273 - 14261108
Alignment:
Q  20 ccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctc 119  Q
    |||||||||||||||   |  |||||||||||||||| |||||| ||| | |||||||||||   |  ||  ||||||||||||||||||||||| || |    
T  14261273 ccacgcttgcaatcagccaatgtgtgtcctttctgactacacctaaagtacttcttctcatctcgatgacgcacattactcttgtggcctttctcaccac 14261174  T
Q  120 acttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattcagtctct 185  Q
    ||||| | ||||  ||||||| |||||||  |||||  || |||||||||||||||||||||||||    
T  14261173 acttgaagcaaataatctcagtaggagcatatctccccttaggcctcctctcatcattcagtctct 14261108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 50 - 182
Target Start/End: Complemental strand, 12712660 - 12712528
Alignment:
Q  50 ttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcag 149  Q
    ||||| |||||||||||||| ||||||||||| || |||||||||||||| |||||||||||||| || |||||  | ||||| |||||| ||||||       
T  12712660 ttctgtccacacctgaagcacttcttctcatctttggtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatctcaacaggagtgt 12712561  T
Q  150 ctctcctattgggcctcctctcatcattcagtc 182  Q
    |||| |  ||||| || ||||||||||||||||    
T  12712560 ctcttcccttgggtcttctctcatcattcagtc 12712528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 87 - 179
Target Start/End: Complemental strand, 12203760 - 12203668
Alignment:
Q  87 tacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattca 179  Q
    |||||||||||||||||||||| ||||| || |||||||| ||||| ||| |||||||| || ||||||| || || ||||||||||||||||    
T  12203760 tacaaacattactcttgtggcccttctcaccacacttgtagcaaacaatcacagcaggaacatctctcctcttaggtctcctctcatcattca 12203668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 88 - 148
Target Start/End: Original strand, 9591653 - 9591713
Alignment:
Q  88 acaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagca 148  Q
    ||||||||| ||||||||||||||||| || || ||| |||| || ||||| |||||||||    
T  9591653 acaaacattgctcttgtggcctttctcgccacagttgaaacagacaatctctgcaggagca 9591713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 88 - 148
Target Start/End: Complemental strand, 16726422 - 16726362
Alignment:
Q  88 acaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagca 148  Q
    ||||||||||||||||||||||||| | || || ||| ||||||| || || |||||||||    
T  16726422 acaaacattactcttgtggcctttcccgccacagttgaaacaaacaatatccgcaggagca 16726362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 88 - 148
Target Start/End: Complemental strand, 17703436 - 17703376
Alignment:
Q  88 acaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagca 148  Q
    ||||||||||||||||||||||||| | || || ||| ||||||| || || |||||||||    
T  17703436 acaaacattactcttgtggcctttcccgccacagttgaaacaaacaatatccgcaggagca 17703376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 110; Significance: 1e-55; HSPs: 20)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 14 - 179
Target Start/End: Original strand, 16150862 - 16151027
Alignment:
Q  14 acatcaccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttct 113  Q
    |||||||||||||||||||||  ||| ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  16150862 acatcaccacgcttgcaatcagctagtgtgtgtcctttctgaccacacctgaagcacttcttctcatctttagtacaaacattactcttgtggcctttct 16150961  T
Q  114 ctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattca 179  Q
    | || ||||| || ||||| || ||| |||||||| ||||||| ||||||||||||||||||||||    
T  16150962 cgccacacttatagcaaacaatatcaacaggagcatctctcctcttgggcctcctctcatcattca 16151027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 14 - 179
Target Start/End: Original strand, 16155008 - 16155173
Alignment:
Q  14 acatcaccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttct 113  Q
    |||||||||||||||||||||  ||| ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  16155008 acatcaccacgcttgcaatcagctagtgtgtgtcctttctgaccacacctgaagcacttcttctcatctttagtacaaacattactcttgtggcctttct 16155107  T
Q  114 ctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattca 179  Q
    | || ||||| || ||||| || ||| |||||||| ||||||| ||||||||||||||||||||||    
T  16155108 cgccacacttatagcaaacaatatcaacaggagcatctctcctcttgggcctcctctcatcattca 16155173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 14 - 189
Target Start/End: Complemental strand, 14993413 - 14993238
Alignment:
Q  14 acatcaccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttct 113  Q
    ||||| ||| |||||||||||  ||  ||||||||||||||||||||||||||||| |||||||  ||      |||||||||||||||||||||||| |    
T  14993413 acatccccatgcttgcaatcagctaaagtgtgtcctttctgaccacacctgaagcacttcttcttctcacggtcacaaacattactcttgtggccttttt 14993314  T
Q  114 ctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattcagtctctgctt 189  Q
    | || |||||| ||||||| || |||| ||||||| ||||||| |||||||||||||||||||||| |||||||||    
T  14993313 caccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcctctcatcattcaatctctgctt 14993238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 50 - 175
Target Start/End: Original strand, 7357529 - 7357654
Alignment:
Q  50 ttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcag 149  Q
    |||||||||||||||||||| ||| ||||||| |||  | ||||||| ||||||||||||||||| || | |||||||||||| |||||||||||||||     
T  7357529 ttctgaccacacctgaagcacttcctctcatctttaccataaacattgctcttgtggcctttctcaccactcttgtaacaaacaatctcagcaggagcat 7357628  T
Q  150 ctctcctattgggcctcctctcatca 175  Q
    ||||||| ||||||||||| ||||||    
T  7357629 ctctcctcttgggcctcctatcatca 7357654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 20 - 177
Target Start/End: Original strand, 18259673 - 18259830
Alignment:
Q  20 ccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctc 119  Q
    |||||||| ||||||  ||| ||||||||||||||||||||||||||||| |||||||||||  ||  |||||||||||||||||||||||| || || |    
T  18259673 ccacgcttacaatcagctagagtgtgtcctttctgaccacacctgaagcacttcttctcatctctatcacaaacattactcttgtggcctttttcaccac 18259772  T
Q  120 acttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcatt 177  Q
    ||||  | ||||| || | || ||||||| || |||| ||||||||||||||||||||    
T  18259773 acttaaagcaaacaatattagtaggagcatctgtcctcttgggcctcctctcatcatt 18259830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 42 - 179
Target Start/End: Original strand, 20893285 - 20893422
Alignment:
Q  42 tgtgtcctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagc 141  Q
    ||||||| |||||||||||||||||||| ||| |||||||  ||  ||||||||| ||||||| |||||| || || |||||||||||||| |||||||     
T  20893285 tgtgtcccttctgaccacacctgaagcacttcctctcatctctaccacaaacattgctcttgttgcctttttcaccacacttgtaacaaacaatctcaga 20893384  T
Q  142 aggagcagctctcctattgggcctcctctcatcattca 179  Q
    ||||||| ||||||| || |||||||| ||||||||||    
T  20893385 aggagcatctctcctcttaggcctcctatcatcattca 20893422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 14 - 189
Target Start/End: Complemental strand, 51603838 - 51603663
Alignment:
Q  14 acatcaccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttct 113  Q
    |||||||| |||||||||||   |||  |||| || ||||| ||||| ||||| || |||||||||||||| |||||||| ||||||||||| |||||||    
T  51603838 acatcaccgcgcttgcaatcggctagcatgtgacccttctgtccacatctgaaacacttcttctcatccttggtacaaacgttactcttgtgacctttct 51603739  T
Q  114 ctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattcagtctctgctt 189  Q
    | || |||||  | || || ||||||||||||||| | ||| || | ||||||||||||||||| |||||||||||    
T  51603738 cgccacacttaaagcacactatctcagcaggagcatccctcttactcggcctcctctcatcattaagtctctgctt 51603663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 14 - 189
Target Start/End: Complemental strand, 53750516 - 53750341
Alignment:
Q  14 acatcaccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttct 113  Q
    |||||||| |||||||||||   |||  |||| || ||||| ||||| ||||| || |||||||||||||| |||||||| ||||||||||| |||||||    
T  53750516 acatcaccgcgcttgcaatcggctagcatgtgacccttctgtccacatctgaaacacttcttctcatccttggtacaaacgttactcttgtgacctttct 53750417  T
Q  114 ctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattcagtctctgctt 189  Q
    | || |||||  | || || ||||||||||||||| | ||| || | ||||||||||||||||| |||||||||||    
T  53750416 cgccacacttaaagcacactatctcagcaggagcatccctcttactcggcctcctctcatcattaagtctctgctt 53750341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 50 - 175
Target Start/End: Complemental strand, 3261804 - 3261679
Alignment:
Q  50 ttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcag 149  Q
    |||||||||||||||||||| ||| | |||||  |   ||||||||||||||||||||||||||| || |||||||| ||||| |||||| ||||||||     
T  3261804 ttctgaccacacctgaagcacttcctatcatctcttccacaaacattactcttgtggcctttctcaccacacttgtagcaaacaatctcaacaggagcat 3261705  T
Q  150 ctctcctattgggcctcctctcatca 175  Q
    ||||||| ||||||||||| ||||||    
T  3261704 ctctcctcttgggcctcctatcatca 3261679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 50 - 179
Target Start/End: Complemental strand, 11204242 - 11204113
Alignment:
Q  50 ttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcag 149  Q
    |||||||||||||||||||||||  | |||||  ||  ||||||||| ||||||||||||||||| || ||||| |||||||| ||||||| |||||||     
T  11204242 ttctgaccacacctgaagcattttctatcatctctaccacaaacattgctcttgtggcctttctcaccacacttataacaaacaatctcagaaggagcat 11204143  T
Q  150 ctctcctattgggcctcctctcatcattca 179  Q
    ||||||| ||||| ||||| ||||||||||    
T  11204142 ctctcctcttgggtctcctatcatcattca 11204113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 60; E-Value: 8e-26
Query Start/End: Original strand, 50 - 173
Target Start/End: Complemental strand, 44658876 - 44658753
Alignment:
Q  50 ttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcag 149  Q
    |||||||||||||||||||| ||| | |||||  |   ||||||||||||||||||||||||||| || |||||||| ||||| |||||| ||||||||     
T  44658876 ttctgaccacacctgaagcacttcctatcatctcttccacaaacattactcttgtggcctttctcaccacacttgtagcaaacaatctcaacaggagcat 44658777  T
Q  150 ctctcctattgggcctcctctcat 173  Q
    ||||||| ||||||||||| ||||    
T  44658776 ctctcctcttgggcctcctatcat 44658753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 24 - 177
Target Start/End: Original strand, 15267012 - 15267165
Alignment:
Q  24 gcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcactt 123  Q
    |||| ||||||  ||| ||||||||||||||||||||||||||||| |||||||||||  |   ||||||||||||||| ||||| |||||  | |||||    
T  15267012 gcttacaatcagctagagtgtgtcctttctgaccacacctgaagcacttcttctcatctctgtcacaaacattactcttatggcccttctcatcacactt 15267111  T
Q  124 gtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcatt 177  Q
    | | ||||| || |  | ||||||| ||||||| ||||||||||||||||||||    
T  15267112 gaagcaaacaatattcgtaggagcatctctcctcttgggcctcctctcatcatt 15267165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 14 - 186
Target Start/End: Original strand, 15073585 - 15073757
Alignment:
Q  14 acatcaccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttct 113  Q
    ||||||| | |||||||||||  ||  |||||||||||||  |||||||| || || |||||||||||      ||| |||||||||||||||||||| |    
T  15073585 acatcacaaagcttgcaatcagctaatgtgtgtcctttctttccacacctaaaacacttcttctcatcacggtcacatacattactcttgtggccttttt 15073684  T
Q  114 ctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattcagtctctg 186  Q
    | || |||||| |||| || ||||||| ||||||| |||||||  | ||||||||||||||||||||||||||    
T  15073685 caccacacttgaaacagacaatctcagtaggagcatctctcctcctaggcctcctctcatcattcagtctctg 15073757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 47 - 179
Target Start/End: Original strand, 27903644 - 27903776
Alignment:
Q  47 cctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggag 146  Q
    |||||||||||||| ||||| || ||||||||||| || || || ||||||||||||||||||||| | || |||||||||||||| |  ||| ||||||    
T  27903644 cctttctgaccacatctgaaacacttcttctcatctttggtgcagacattactcttgtggcctttcgcaccacacttgtaacaaacaacatcaacaggag 27903743  T
Q  147 cagctctcctattgggcctcctctcatcattca 179  Q
    || ||||||   | |||| ||||||||||||||    
T  27903744 catctctccccctaggccgcctctcatcattca 27903776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 88 - 175
Target Start/End: Complemental strand, 29450509 - 29450422
Alignment:
Q  88 acaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatca 175  Q
    ||||||||||||||||||||||||||| || |||||||| ||||| |||||| |||||||| ||||||| || |||||||| ||||||    
T  29450509 acaaacattactcttgtggcctttctcaccacacttgtagcaaacaatctcaacaggagcatctctcctcttaggcctcctatcatca 29450422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 89 - 190
Target Start/End: Original strand, 8708978 - 8709079
Alignment:
Q  89 caaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattcagtctctgct 188  Q
    |||||||||||||||||||| ||||| || |||||||| ||||| |||||||||||| || || | || || || |||||||||||||||| ||| ||||    
T  8708978 caaacattactcttgtggcccttctcaccacacttgtagcaaacaatctcagcaggaacatctattctcttaggtctcctctcatcattcaatctttgct 8709077  T
Q  189 tc 190  Q
    ||    
T  8709078 tc 8709079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 92 - 188
Target Start/End: Original strand, 13879413 - 13879509
Alignment:
Q  92 acattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattcagtctctgct 188  Q
    ||||||||||||||||| ||||| || |||||||||||||| ||||||| || | || |||| || || || |||||||||||||||| ||| ||||    
T  13879413 acattactcttgtggcccttctcaccacacttgtaacaaacaatctcagtagaaacatctcttctcttaggtctcctctcatcattcaatctttgct 13879509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 148
Target Start/End: Complemental strand, 18224185 - 18224125
Alignment:
Q  88 acaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagca 148  Q
    ||||||||||| ||||||||||||||| || || ||| ||||||| ||||| |||||||||    
T  18224185 acaaacattacacttgtggcctttctcgccacagttgaaacaaacaatctccgcaggagca 18224125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 88 - 189
Target Start/End: Original strand, 14697401 - 14697502
Alignment:
Q  88 acaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattcagtctctgc 187  Q
    |||| |||||||||| ||||||||||| || ||  | || ||||| |||||||||| |||| || || |  | ||||||||||||||||||| ||| |||    
T  14697401 acaagcattactcttatggcctttctcaccacaagtatagcaaacaatctcagcagtagcatctttctttctaggcctcctctcatcattcaatctttgc 14697500  T
Q  188 tt 189  Q
    ||    
T  14697501 tt 14697502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 88 - 148
Target Start/End: Original strand, 13513650 - 13513710
Alignment:
Q  88 acaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagca 148  Q
    ||||||||| ||||||||||||||||| || || ||| |||| || ||||| |||||||||    
T  13513650 acaaacattgctcttgtggcctttctcgccacagttgaaacagacaatctctgcaggagca 13513710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 109; Significance: 5e-55; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 14 - 190
Target Start/End: Original strand, 54302 - 54478
Alignment:
Q  14 acatcaccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttct 113  Q
    ||||||||||||||||||| |  ||| |||||||| ||||||||||||||||| || ||||||||||| |||||||||||||||||||||||||||||||    
T  54302 acatcaccacgcttgcaataagctagagtgtgtcccttctgaccacacctgaaacacttcttctcatctttagtacaaacattactcttgtggcctttct 54401  T
Q  114 ctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattcagtctctgcttc 190  Q
    | || |||||||||||||||||||||||| |||||  ||  |||||||||||||||||||||||||  |||||||||    
T  54402 cgccacacttgtaacaaacgatctcagcaagagcatttcatctattgggcctcctctcatcattcaacctctgcttc 54478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 108; Significance: 2e-54; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 14 - 177
Target Start/End: Original strand, 15327 - 15490
Alignment:
Q  14 acatcaccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttct 113  Q
    |||||||||||||||||||||  ||| ||||||| ||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||    
T  15327 acatcaccacgcttgcaatcagctagagtgtgtcatttctgaccacacctgaagcacttcttctcgtccttagtacaaacattactcttgtggcctttct 15426  T
Q  114 ctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcatt 177  Q
    | || ||||| || || |  ||||||||||||||| ||||||||||||||||||||||||||||    
T  15427 cgccacacttatagcagaaaatctcagcaggagcatctctcctattgggcctcctctcatcatt 15490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 108; Significance: 2e-54; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 14 - 177
Target Start/End: Original strand, 19438092 - 19438255
Alignment:
Q  14 acatcaccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttct 113  Q
    |||||||||||||||||||||  ||| |||||||||||||||||||||||||| || || |||||||| ||||||||||||||||||  |||||||||||    
T  19438092 acatcaccacgcttgcaatcagctagagtgtgtcctttctgaccacacctgaaacacttattctcatctttagtacaaacattactcaagtggcctttct 19438191  T
Q  114 ctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcatt 177  Q
    | || |||||||||| ||||||||||||||||||| ||||||| ||||||||||||||||||||    
T  19438192 caccacacttgtaacgaacgatctcagcaggagcatctctcctcttgggcctcctctcatcatt 19438255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 14 - 179
Target Start/End: Complemental strand, 14377107 - 14376942
Alignment:
Q  14 acatcaccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttct 113  Q
    |||||||||||||| |||| |  ||  ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  14377107 acatcaccacgcttacaattagctaaagtgtgtcctttctgaccacacctgaagcacttcttctcatctttagtacaaacattactcttgtggcctttct 14377008  T
Q  114 ctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattca 179  Q
    | || |||||||| ||||| |  ||| |||||||| ||||||||||||| ||||||||||||||||    
T  14377007 caccgcacttgtagcaaacaacatcaacaggagcatctctcctattgggtctcctctcatcattca 14376942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 94; E-Value: 4e-46
Query Start/End: Original strand, 41 - 186
Target Start/End: Complemental strand, 24515578 - 24515433
Alignment:
Q  41 gtgtgtcctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcag 140  Q
    ||||||| |||||||||||||||||| || ||||||||||| |||||||||||||||||||||||||||||||| || ||||| |||||||| || |||     
T  24515578 gtgtgtcttttctgaccacacctgaaacacttcttctcatctttagtacaaacattactcttgtggcctttctcaccacacttataacaaacaatatcaa 24515479  T
Q  141 caggagcagctctcctattgggcctcctctcatcattcagtctctg 186  Q
    |||||||| ||||||| ||||||||||||||||||||||| |||||    
T  24515478 caggagcatctctcctcttgggcctcctctcatcattcagcctctg 24515433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 17 - 189
Target Start/End: Original strand, 18797783 - 18797955
Alignment:
Q  17 tcaccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctc 116  Q
    ||||||||||||||||||  ||| |||||||| ||||||||||||||||| ||||||| |||||| ||||| |||||||||||||||||||||||||| |    
T  18797783 tcaccacgcttgcaatcagctagagtgtgtcccttctgaccacacctgaaacatttctgctcatctttagtgcaaacattactcttgtggcctttctcgc 18797882  T
Q  117 ctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattcagtctctgctt 189  Q
    | ||||| |||||||| || ||  |||||||| | ||||| |||||||||||||||||||||| ||| |||||    
T  18797883 cacacttataacaaacaatatccacaggagcatccctcctcttgggcctcctctcatcattcaatctttgctt 18797955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 41 - 182
Target Start/End: Complemental strand, 21567155 - 21567014
Alignment:
Q  41 gtgtgtcctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcag 140  Q
    ||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| |||||||||||||| || |||||  | ||||| || ||||    
T  21567155 gtgtgtcctttctgaccacacctgaagcacttcttctcatctttagtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcag 21567056  T
Q  141 caggagcagctctcctattgggcctcctctcatcattcagtc 182  Q
    |||||||| ||||||| |||||||| ||||||||||||||||    
T  21567055 caggagcatctctcctcttgggccttctctcatcattcagtc 21567014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 73; E-Value: 1e-33
Query Start/End: Original strand, 20 - 180
Target Start/End: Original strand, 19456119 - 19456279
Alignment:
Q  20 ccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctc 119  Q
    |||||||| ||||||  ||| ||||||||||||||||  ||||||||||| |||||||||||  ||  ||| |||||||||||||||||||| || || |    
T  19456119 ccacgcttacaatcatctagtgtgtgtcctttctgacaccacctgaagcacttcttctcatctctatcacagacattactcttgtggcctttttcaccac 19456218  T
Q  120 acttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattcag 180  Q
    ||||| | ||||| ||||||| ||||| | ||||||| |||||||||||||||||||||||    
T  19456219 acttgaagcaaacaatctcagtaggagtatctctcctcttgggcctcctctcatcattcag 19456279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 73; E-Value: 1e-33
Query Start/End: Original strand, 20 - 180
Target Start/End: Original strand, 19466264 - 19466424
Alignment:
Q  20 ccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctc 119  Q
    |||||||| ||||||  ||| ||||||||||||||||  ||||||||||| |||||||||||  ||  ||| |||||||||||||||||||| || || |    
T  19466264 ccacgcttacaatcatctagtgtgtgtcctttctgacaccacctgaagcacttcttctcatctctatcacagacattactcttgtggcctttttcaccac 19466363  T
Q  120 acttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattcag 180  Q
    ||||| | ||||| ||||||| ||||| | ||||||| |||||||||||||||||||||||    
T  19466364 acttgaagcaaacaatctcagtaggagtatctctcctcttgggcctcctctcatcattcag 19466424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 20 - 189
Target Start/End: Complemental strand, 10466033 - 10465864
Alignment:
Q  20 ccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctc 119  Q
    |||||||| || |||  |||||||||||| |||||||||||||| || |||||| |||||||  ||  |||| |||| |||||||||||||| || || |    
T  10466033 ccacgcttacattcagctagggtgtgtcccttctgaccacacctaaaacatttcctctcatctctaccacaagcattgctcttgtggcctttttcaccac 10465934  T
Q  120 acttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattcagtctctgctt 189  Q
    |||||||||| || |||||||||||| || ||||||| ||||||||||| |||||||||| | |||||||    
T  10465933 acttgtaacagacaatctcagcaggaacatctctcctcttgggcctcctatcatcattcattttctgctt 10465864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 16 - 186
Target Start/End: Original strand, 16813732 - 16813902
Alignment:
Q  16 atcaccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctct 115  Q
    ||||||||||||||| |||  ||  ||||| | |||||  ||||| | |||||| |||||||| ||   | | ||||||||||||||||||||||||||     
T  16813732 atcaccacgcttgcattcagctattgtgtgccatttcttcccacatcggaagcacttcttctcctcaccattgcaaacattactcttgtggcctttctca 16813831  T
Q  116 cctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattcagtctctg 186  Q
    || |||||||| ||||| |||||||||||| || ||||||| || || |||||||||||||||| ||||||    
T  16813832 ccacacttgtagcaaacaatctcagcaggatcatctctcctcttaggtctcctctcatcattcaatctctg 16813902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 50 - 175
Target Start/End: Original strand, 24367526 - 24367651
Alignment:
Q  50 ttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcag 149  Q
    |||||||||||||||||||| ||| | |||||  |   ||||||||||||||||||||||||||| || |||||||| ||||| |||||| || |||||     
T  24367526 ttctgaccacacctgaagcacttcctatcatctcttccacaaacattactcttgtggcctttctcaccacacttgtagcaaacaatctcaacatgagcat 24367625  T
Q  150 ctctcctattgggcctcctctcatca 175  Q
    ||||||| ||||||||||| ||||||    
T  24367626 ctctcctcttgggcctcctatcatca 24367651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 89 - 179
Target Start/End: Complemental strand, 8720821 - 8720731
Alignment:
Q  89 caaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattca 179  Q
    |||||||||||||||||||||||||| || |||||||| ||||| |||||| ||||| || ||||||| || |||||||||||||||||||    
T  8720821 caaacattactcttgtggcctttctcaccacacttgtagcaaacaatctcatcaggatcatctctcctcttaggcctcctctcatcattca 8720731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 92 - 189
Target Start/End: Original strand, 21474768 - 21474865
Alignment:
Q  92 acattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattcagtctctgctt 189  Q
    |||||||||||||||||||| || || |||||| ||||||| ||||||| ||||||| |||||||  | ||||||||||||||||||||  |||||||    
T  21474768 acattactcttgtggcctttttcaccacacttgaaacaaacaatctcagtaggagcatctctcctcctaggcctcctctcatcattcagcatctgctt 21474865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 47 - 190
Target Start/End: Complemental strand, 19486452 - 19486309
Alignment:
Q  47 cctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggag 146  Q
    |||||||  ||||| | |||||| |||||||||||   | | |||||||||||||||||||| ||||| || |||||||| ||||| ||||||| ||||     
T  19486452 cctttcttcccacatcggaagcacttcttctcatcaccattgcaaacattactcttgtggcccttctcaccacacttgtagcaaacaatctcagtaggaa 19486353  T
Q  147 cagctctcctattgggcctcctctcatcattcagtctctgcttc 190  Q
    || |||| || || || |||||||||||||||| ||| ||||||    
T  19486352 catctcttctcttaggtctcctctcatcattcaatctttgcttc 19486309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 16 - 186
Target Start/End: Original strand, 25770936 - 25771106
Alignment:
Q  16 atcaccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctct 115  Q
    ||||||||||||||||||| |||  ||||||||||||   ||||| |  || || |||||||||||      ||| | |||| ||||||||||||| ||     
T  25770936 atcaccacgcttgcaatcagataatgtgtgtcctttcgtcccacatcgaaaacacttcttctcatcacggtcacataaattattcttgtggcctttttca 25771035  T
Q  116 cctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattcagtctctg 186  Q
    || |||||| |||| || ||||||| ||||||| ||||||| || |||||||||||||||||||| |||||    
T  25771036 ccacacttgaaacagacaatctcagtaggagcatctctcctcttaggcctcctctcatcattcagcctctg 25771106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 50 - 146
Target Start/End: Complemental strand, 34642741 - 34642645
Alignment:
Q  50 ttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggag 146  Q
    ||||| |||||||||||||| ||||||||||| || |||||||||||||| |||||||| ||||| || |||||  | ||||| ||||| |||||||    
T  34642741 ttctgtccacacctgaagcacttcttctcatctttggtacaaacattacttttgtggcccttctcgccacacttaaagcaaactatctccgcaggag 34642645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 47 - 129
Target Start/End: Original strand, 15462459 - 15462541
Alignment:
Q  47 cctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaaca 129  Q
    ||||||||||| || ||||| ||||||||||||||  | || || ||||||||||||||||||||| | || |||||||||||    
T  15462459 cctttctgaccgcatctgaaacatttcttctcatctctggtgcagacattactcttgtggcctttcgcaccacacttgtaaca 15462541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 88 - 179
Target Start/End: Complemental strand, 30678141 - 30678050
Alignment:
Q  88 acaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattca 179  Q
    ||||||||||||||||||||  ||||| || |||||||| ||||| | ||||||||||| | || || |  | |||||||||||||||||||    
T  30678141 acaaacattactcttgtggctcttctcaccacacttgtagcaaacaacctcagcaggagtatctttctttctaggcctcctctcatcattca 30678050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 94 - 188
Target Start/End: Complemental strand, 25958864 - 25958770
Alignment:
Q  94 attactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattcagtctctgct 188  Q
    ||||||| ||||||||||||  || ||| |||| ||||| ||||||| ||||||| |||| || || || ||||||||||||| |||||| ||||    
T  25958864 attactcctgtggcctttcttaccacacctgtagcaaacaatctcagtaggagcatctctactcttaggtctcctctcatcatccagtctttgct 25958770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 88 - 177
Target Start/End: Original strand, 23081587 - 23081676
Alignment:
Q  88 acaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcatt 177  Q
    |||| |||||||||||||||||||||| || ||  | |||||||| |||||| |||||||| || || |  | |||| ||||||||||||    
T  23081587 acaagcattactcttgtggcctttctcaccacaagtataacaaacaatctcaacaggagcatctttcttcctaggccgcctctcatcatt 23081676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 56 - 145
Target Start/End: Complemental strand, 27559118 - 27559029
Alignment:
Q  56 ccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcagga 145  Q
    ||||||| ||| || |||||| | |||| || ||||||| ||||||||||||||||||| || || ||| |||||   ||||||||||||    
T  27559118 ccacaccggaaacacttcttcacctcctcaggacaaacagtactcttgtggcctttctcaccacaattgaaacaagtaatctcagcagga 27559029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 130
Target Start/End: Complemental strand, 20010657 - 20010577
Alignment:
Q  50 ttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaa 130  Q
    |||||||| || ||||| |||||||||||||| |  || ||| |||||||||||||||| ||| | || || |||||||||    
T  20010657 ttctgaccgcatctgaaacatttcttctcatcttgggtgcaagcattactcttgtggcccttcacaccacatttgtaacaa 20010577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 88 - 148
Target Start/End: Original strand, 21764976 - 21765036
Alignment:
Q  88 acaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagca 148  Q
    ||||||||| ||||||||||||||||| || || ||| |||| || ||||| |||||||||    
T  21764976 acaaacattgctcttgtggcctttctcaccacaattgaaacagacaatctccgcaggagca 21765036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 105; Significance: 1e-52; HSPs: 3)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 41 - 189
Target Start/End: Complemental strand, 39355 - 39207
Alignment:
Q  41 gtgtgtcctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcag 140  Q
    ||||||||||||||||||||||||||||| ||||||||||| |||  ||||||||||||||||||||||||||| || |||||||| ||||| |||||||    
T  39355 gtgtgtcctttctgaccacacctgaagcacttcttctcatctttatcacaaacattactcttgtggcctttctcaccacacttgtagcaaacaatctcag 39256  T
Q  141 caggagcagctctcctattgggcctcctctcatcattcagtctctgctt 189  Q
    |||||||| ||||||| ||||||||||||||||||||||| ||||||||    
T  39255 caggagcatctctcctcttgggcctcctctcatcattcagcctctgctt 39207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 50 - 148
Target Start/End: Complemental strand, 180852 - 180754
Alignment:
Q  50 ttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagca 148  Q
    |||||||| || ||||| |||||||||||||| | ||| ||| |||||||||||||||| ||| | || || ||||||||||| | |||| ||||||||    
T  180852 ttctgaccgcatctgaaacatttcttctcatcttgagtgcaagcattactcttgtggcccttcacaccacatttgtaacaaacaacctcaacaggagca 180754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #3
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 88 - 148
Target Start/End: Original strand, 14753 - 14813
Alignment:
Q  88 acaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagca 148  Q
    ||||||||||||||||||||| ||||| || |||||| ||||||| ||||| |||||||||    
T  14753 acaaacattactcttgtggccattctcgccacacttgaaacaaacaatctccgcaggagca 14813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0420 (Bit Score: 102; Significance: 7e-51; HSPs: 1)
Name: scaffold0420
Description:

Target: scaffold0420; HSP #1
Raw Score: 102; E-Value: 7e-51
Query Start/End: Original strand, 17 - 190
Target Start/End: Original strand, 8872 - 9045
Alignment:
Q  17 tcaccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctc 116  Q
    ||||||||||||||||||  ||| |||||||||||||||||||||||||| || ||||||||||| |||||||||||||||||||||||||| ||||| |    
T  8872 tcaccacgcttgcaatcagctagagtgtgtcctttctgaccacacctgaaacacttcttctcatctttagtacaaacattactcttgtggccattctcgc 8971  T
Q  117 ctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattcagtctctgcttc 190  Q
    | ||||| |||||||| |||||| |||||||| ||||||| ||||| || ||||||||||||||  ||||||||    
T  8972 cacacttataacaaacaatctcatcaggagcatctctcctcttgggtcttctctcatcattcagcttctgcttc 9045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 101; Significance: 3e-50; HSPs: 2)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 17 - 189
Target Start/End: Complemental strand, 8508 - 8336
Alignment:
Q  17 tcaccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctc 116  Q
    ||||||||||||||||||  ||| |||||||| ||||||||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||| |    
T  8508 tcaccacgcttgcaatcagctagagtgtgtcccttctgaccacacctgaaacacttcttctcatccttagtacaaacattactcttgtggccattctcgc 8409  T
Q  117 ctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattcagtctctgctt 189  Q
    | ||||| |||||||| || ||| || ||||| ||||||| ||||| ||||||||||||||||| ||||||||    
T  8408 cacacttataacaaacaatatcaacatgagcatctctcctcttgggtctcctctcatcattcagcctctgctt 8336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235; HSP #2
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 17 - 189
Target Start/End: Complemental strand, 18722 - 18550
Alignment:
Q  17 tcaccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctc 116  Q
    ||||||||||||||||||  ||| |||||||| ||||||||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||| |    
T  18722 tcaccacgcttgcaatcagctagagtgtgtcccttctgaccacacctgaaacacttcttctcatccttagtacaaacattactcttgtggccattctcgc 18623  T
Q  117 ctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattcagtctctgctt 189  Q
    | ||||| |||||||| || ||| || ||||| ||||||| ||||| ||||||||||||||||| ||||||||    
T  18622 cacacttataacaaacaatatcaacatgagcatctctcctcttgggtctcctctcatcattcagcctctgctt 18550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 101; Significance: 3e-50; HSPs: 3)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 41 - 189
Target Start/End: Original strand, 319525 - 319673
Alignment:
Q  41 gtgtgtcctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcag 140  Q
    ||||||||||||||||||||||||||||| ||||||||||| |||  ||| ||||||||||||||||||||||| || |||||||| ||||| ||| |||    
T  319525 gtgtgtcctttctgaccacacctgaagcacttcttctcatctttatcacagacattactcttgtggcctttctcgccacacttgtagcaaacaatcccag 319624  T
Q  141 caggagcagctctcctattgggcctcctctcatcattcagtctctgctt 189  Q
    |||||||| ||||||||||||||||||||||||||||||| ||||||||    
T  319625 caggagcatctctcctattgggcctcctctcatcattcagcctctgctt 319673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 41 - 189
Target Start/End: Original strand, 325989 - 326136
Alignment:
Q  41 gtgtgtcctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcag 140  Q
    ||||||||||||||||||||| ||||||| ||||||||||| |||  ||| ||||||||||||||| ||||||| || |||||||| ||||| |||||||    
T  325989 gtgtgtcctttctgaccacacttgaagcacttcttctcatctttatcacagacattactcttgtggtctttctcgccacacttgtagcaaacaatctcag 326088  T
Q  141 caggagcagctctcctattgggcctcctctcatcattcagtctctgctt 189  Q
    |||||||| |||||||||| |||||||||||||||||||| ||||||||    
T  326089 caggagcatctctcctatt-ggcctcctctcatcattcagcctctgctt 326136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 47 - 179
Target Start/End: Complemental strand, 200493 - 200361
Alignment:
Q  47 cctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggag 146  Q
    |||||||  ||||| | |||||| |||||||||||   | | |||||||||||||||||||| ||||| || |||||||| ||||| ||||||  ||||     
T  200493 cctttcttcccacatcggaagcacttcttctcatcaccattgcaaacattactcttgtggcccttctcaccacacttgtagcaaacaatctcattaggaa 200394  T
Q  147 cagctctcctattgggcctcctctcatcattca 179  Q
    |  |||| || || || ||||||||||||||||    
T  200393 cttctcttctcttaggtctcctctcatcattca 200361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 101; Significance: 3e-50; HSPs: 12)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 41 - 189
Target Start/End: Complemental strand, 22027742 - 22027594
Alignment:
Q  41 gtgtgtcctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcag 140  Q
    ||||| || |||||||||||||||||||| ||||||||||| || |||||||||||||||||||||||||| || || |||||||||||||| |||||||    
T  22027742 gtgtgacccttctgaccacacctgaagcacttcttctcatctttggtacaaacattactcttgtggcctttatcgccacacttgtaacaaactatctcag 22027643  T
Q  141 caggagcagctctcctattgggcctcctctcatcattcagtctctgctt 189  Q
    |||||||| |||||||||||||||||||||||||||||| ||| |||||    
T  22027642 caggagcatctctcctattgggcctcctctcatcattcaatctttgctt 22027594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 50 - 189
Target Start/End: Original strand, 22054191 - 22054330
Alignment:
Q  50 ttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcag 149  Q
    ||||||||||| |||||||| |||||||||||||| ||||||||||||||||||||||||||||| || |||||  ||||||| |||||||||| ||||     
T  22054191 ttctgaccacatctgaagcacttcttctcatccttggtacaaacattactcttgtggcctttctcgccacacttaaaacaaactatctcagcagaagcat 22054290  T
Q  150 ctctcctattgggcctcctctcatcattcagtctctgctt 189  Q
    |||||||||| ||||||||||||||||| |||||||||||    
T  22054291 ctctcctattcggcctcctctcatcattaagtctctgctt 22054330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 20 - 175
Target Start/End: Complemental strand, 16268707 - 16268552
Alignment:
Q  20 ccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctc 119  Q
    ||||||||||| |||  |||| | || || |||||||||||||||||||| ||| ||||||| |||  ||||||||||||||||||||||||||| || |    
T  16268707 ccacgcttgcattcagctaggctatgacccttctgaccacacctgaagcacttcctctcatctttaccacaaacattactcttgtggcctttctcaccac 16268608  T
Q  120 acttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatca 175  Q
    ||||||||||||| ||||||| ||||||| ||||| | || |||||||| ||||||    
T  16268607 acttgtaacaaacaatctcagaaggagcatctctcttcttaggcctcctgtcatca 16268552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 20 - 189
Target Start/End: Complemental strand, 31414015 - 31413846
Alignment:
Q  20 ccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctc 119  Q
    |||||||| || |||  ||| ||||||||||||||||||||||| || || ||| |||||||  ||  |||| |||| ||||| |||||||| || || |    
T  31414015 ccacgcttacattcagctagtgtgtgtcctttctgaccacacctaaaacacttcctctcatctctaccacaagcattgctcttatggcctttttcaccac 31413916  T
Q  120 acttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattcagtctctgctt 189  Q
    ||||| ||||||| || ||| |||||||| ||||||| |||||||||||||||||||||| |||||||||    
T  31413915 acttgaaacaaacaatttcaacaggagcatctctcctcttgggcctcctctcatcattcattctctgctt 31413846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 50 - 175
Target Start/End: Original strand, 28984239 - 28984364
Alignment:
Q  50 ttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcag 149  Q
    |||||||||||||||||||| ||| | |||||  |   ||||||||||||||||||||||||||| || |||||||||||||| |||||| | ||||||     
T  28984239 ttctgaccacacctgaagcacttcctatcatctcttccacaaacattactcttgtggcctttctcaccacacttgtaacaaacaatctcaactggagcat 28984338  T
Q  150 ctctcctattgggcctcctctcatca 175  Q
    ||||||| ||||||||||| ||||||    
T  28984339 ctctcctcttgggcctcctatcatca 28984364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 13 - 186
Target Start/End: Original strand, 21928719 - 21928892
Alignment:
Q  13 gacatcaccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagcatttcttctcatccttagt-acaaacattactcttgtggccttt 111  Q
    ||||||||||||||||||||||   |  |||||||||||||| ||||| ||||| || ||||||||||| |  || ||  |||||||||| |||||| ||    
T  21928719 gacatcaccacgcttgcaatcacccaaagtgtgtcctttctgtccacatctgaaacacttcttctcatc-tcggtcacttacattactctcgtggccctt 21928817  T
Q  112 ctctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattcagtctctg 186  Q
     || || |||||| ||||||  ||||||| ||||||| |||||||  | |||||||||||||||||||| |||||    
T  21928818 ttcgccacacttgaaacaaagaatctcagtaggagcatctctcctcctaggcctcctctcatcattcagcctctg 21928892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 14 - 175
Target Start/End: Original strand, 19985472 - 19985633
Alignment:
Q  14 acatcaccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttct 113  Q
    ||||| |||| ||||||||||  ||  ||||||| |||||| ||||| |||||  | |||||||||||      ||| |||||||||||||||| ||| |    
T  19985472 acatccccactcttgcaatcagctaatgtgtgtcatttctgtccacatctgaaatacttcttctcatcacggtcacatacattactcttgtggctttttt 19985571  T
Q  114 ctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatca 175  Q
    | || |||||| ||||||| ||||||| ||||||| ||||||| || |||||||||||||||    
T  19985572 cgccacacttgaaacaaacaatctcagtaggagcatctctcctcttaggcctcctctcatca 19985633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 89 - 188
Target Start/End: Complemental strand, 6606883 - 6606784
Alignment:
Q  89 caaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattcagtctctgct 188  Q
    |||||||||||||||||||| ||||| || |||||||| ||||| ||||||| |||| || |||| || || || |||||||||||||||| ||| ||||    
T  6606883 caaacattactcttgtggcccttctcaccacacttgtagcaaacaatctcagtaggaacatctcttctcttaggtctcctctcatcattcaatctttgct 6606784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 90 - 179
Target Start/End: Original strand, 20391454 - 20391543
Alignment:
Q  90 aaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattca 179  Q
    ||||||||||||||||||| ||||| || |||||||| ||||| ||||||| |||| || |||| || || || ||||||||||||||||    
T  20391454 aaacattactcttgtggcccttctcaccacacttgtagcaaacaatctcagaaggaacatctctactcttaggtctcctctcatcattca 20391543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 16 - 183
Target Start/End: Original strand, 22374163 - 22374330
Alignment:
Q  16 atcaccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctct 115  Q
    |||||||||||||||||||  ||  |||||||||||||  |||||||| || || ||||| |||||      ||| ||||||||||||||| |||| ||     
T  22374163 atcaccacgcttgcaatcagctaatgtgtgtcctttctttccacacctaaaacacttcttttcatcacggtcacatacattactcttgtggtctttttca 22374262  T
Q  116 cctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattcagtct 183  Q
    || |||||| |||| || ||||||| ||||| | |||||||  | ||||||||||| ||||| |||||    
T  22374263 ccacacttgaaacagacaatctcagtaggagaatctctcctcctaggcctcctctcctcattaagtct 22374330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 179
Target Start/End: Complemental strand, 29300909 - 29300750
Alignment:
Q  20 ccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctc 119  Q
    |||||||| || |||  ||| ||||||||| ||||||||||||| || || ||| | |||||  ||  |||| |||| |||||||||||| | || || |    
T  29300909 ccacgcttacattcagctagtgtgtgtcctctctgaccacacctaaaacacttcctttcatctctaccacaagcattgctcttgtggcctctttcaccac 29300810  T
Q  120 acttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattca 179  Q
    ||||  ||||||| || ||||| ||| || ||| ||| ||||||||||| ||||||||||    
T  29300809 acttaaaacaaacaatttcagcgggaacatctcccctcttgggcctcctatcatcattca 29300750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 148
Target Start/End: Complemental strand, 30310559 - 30310499
Alignment:
Q  88 acaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagca 148  Q
    ||||||||||||||||||||||||||| || || ||| ||||||| || || |||||||||    
T  30310559 acaaacattactcttgtggcctttctcgccacagttgaaacaaacaatatccgcaggagca 30310499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 101; Significance: 3e-50; HSPs: 17)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 25 - 189
Target Start/End: Complemental strand, 20833007 - 20832843
Alignment:
Q  25 cttgcaatcaaatagggtgtgtcctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttg 124  Q
    ||||||||||  ||| |||||||||||||||||||||||||| || ||||||||||| |||||||||||||||||||||||||||||||| || ||||||    
T  20833007 cttgcaatcagctagtgtgtgtcctttctgaccacacctgaaacaattcttctcatctttagtacaaacattactcttgtggcctttctcgccacacttg 20832908  T
Q  125 taacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattcagtctctgctt 189  Q
    || ||||| || ||| |||||||| ||||||| ||||| ||||||||||||||||| ||||||||    
T  20832907 tagcaaacaatatcaacaggagcatctctcctcttgggtctcctctcatcattcagcctctgctt 20832843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 14 - 189
Target Start/End: Complemental strand, 21739154 - 21738979
Alignment:
Q  14 acatcaccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttct 113  Q
    ||||| |||||||| ||||||| || |||||||||||||||||||||||| ||||| |||||||||||   |  ||||||||||||||||||||||||||    
T  21739154 acatccccacgcttacaatcaactaaggtgtgtcctttctgaccacacctaaagcacttcttctcatctcgatcacaaacattactcttgtggcctttct 21739055  T
Q  114 ctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattcagtctctgctt 189  Q
    | || |||||| | ||||  ||||||| ||||||| ||||||| || ||||||||||||||||||| |||||||||    
T  21739054 caccacacttgaagcaaataatctcagtaggagcacctctcctcttaggcctcctctcatcattcaatctctgctt 21738979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 20 - 175
Target Start/End: Original strand, 20297661 - 20297816
Alignment:
Q  20 ccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctc 119  Q
    ||||||||||| |||  |||| |||| || |||| ||||||||||||||| ||| ||||||| |||  |||||||||||||||||||| |||||| || |    
T  20297661 ccacgcttgcattcagctaggctgtgacccttctaaccacacctgaagcacttcctctcatctttaccacaaacattactcttgtggcatttctcaccac 20297760  T
Q  120 acttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatca 175  Q
    ||||||||||||| ||||||||||||||| ||||||| ||||||||||| ||||||    
T  20297761 acttgtaacaaacaatctcagcaggagcatctctcctcttgggcctcctgtcatca 20297816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 14 - 189
Target Start/End: Complemental strand, 21742670 - 21742495
Alignment:
Q  14 acatcaccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagcatttcttctcatccttagt-acaaacattactcttgtggcctttc 112  Q
    ||||| |||||||||||||||   |  ||||||||||||||||||||||| ||||| ||||||||||| |  || ||| |||||||||||||||||||||    
T  21742670 acatccccacgcttgcaatcagccaatgtgtgtcctttctgaccacacctaaagcacttcttctcatc-tcggtcacatacattactcttgtggcctttc 21742572  T
Q  113 tctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattcagtctctgctt 189  Q
    || || |||||| | ||||  ||||||| ||||||| ||||||| || |||||||||||||||||||||||||||||    
T  21742571 tcaccacacttgaagcaaataatctcagtaggagcatctctcctcttaggcctcctctcatcattcagtctctgctt 21742495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 75; E-Value: 9e-35
Query Start/End: Original strand, 23 - 189
Target Start/End: Original strand, 19857555 - 19857721
Alignment:
Q  23 cgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcact 122  Q
    ||||| ||||||  ||| |||||||||||||||||||||||||||||||||||||||||  ||  ||| |||||||||||||||||||| || || ||||    
T  19857555 cgcttacaatcagctagtgtgtgtcctttctgaccacacctgaagcatttcttctcatctctatcacagacattactcttgtggcctttttcaccacact 19857654  T
Q  123 tgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattcagtctctgctt 189  Q
    || | ||||| ||||| | || |||| ||||||| || |||||||||||||||||||  ||||||||    
T  19857655 tgaagcaaacaatctcggtagaagcatctctcctcttaggcctcctctcatcattcaacctctgctt 19857721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 42 - 179
Target Start/End: Original strand, 21961327 - 21961464
Alignment:
Q  42 tgtgtcctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagc 141  Q
    ||||||| |||||||||||||||||||| ||| ||||||| |||  ||||||||| |||||||||||||| || || |||||||||||||| |||||||     
T  21961327 tgtgtcccttctgaccacacctgaagcacttcctctcatctttaccacaaacattgctcttgtggcctttttcaccacacttgtaacaaacaatctcaga 21961426  T
Q  142 aggagcagctctcctattgggcctcctctcatcattca 179  Q
    ||||||| ||||||| ||||| ||||| ||||||||||    
T  21961427 aggagcatctctcctcttgggtctcctatcatcattca 21961464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 20 - 179
Target Start/End: Complemental strand, 24096727 - 24096568
Alignment:
Q  20 ccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctc 119  Q
    |||||||| || |||  ||| ||||||||||||||||||||||| || || ||| |||||||  ||  |||| ||||||||||||||||||| || || |    
T  24096727 ccacgcttacattcagctagtgtgtgtcctttctgaccacacctaaaacacttcctctcatctctaccacaagcattactcttgtggcctttttcaccac 24096628  T
Q  120 acttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattca 179  Q
    ||||| ||||||| |||||| |||||||| ||||||| ||||||||||||||||||||||    
T  24096627 acttgaaacaaacaatctcaacaggagcatctctcctcttgggcctcctctcatcattca 24096568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 50 - 179
Target Start/End: Original strand, 52989049 - 52989178
Alignment:
Q  50 ttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcag 149  Q
    ||||||||||||||||| || ||| ||||||| |||  ||||||||| |||||||||||||| || || |||||||||||||| ||||||| |||||||     
T  52989049 ttctgaccacacctgaaacacttcctctcatctttaccacaaacattgctcttgtggcctttttcaccacacttgtaacaaacaatctcagaaggagcat 52989148  T
Q  150 ctctcctattgggcctcctctcatcattca 179  Q
    ||||||| || |||||||| ||||||||||    
T  52989149 ctctcctcttaggcctcctatcatcattca 52989178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 14 - 177
Target Start/End: Complemental strand, 22015863 - 22015700
Alignment:
Q  14 acatcaccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttct 113  Q
    ||||| |||||||||||||||  ||  ||||||||||||||||||||||||||||| |||||||||||  ||  |||||||||||| || |||||||| |    
T  22015863 acatccccacgcttgcaatcagctaaagtgtgtcctttctgaccacacctgaagcacttcttctcatctctatcacaaacattacttttttggccttttt 22015764  T
Q  114 ctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcatt 177  Q
    |||| |||||| | ||||| || |  | ||||||| ||||| | || |||||||||||||||||    
T  22015763 ctccacacttgaatcaaacaatatttgtaggagcatctctcttctttggcctcctctcatcatt 22015700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 50 - 189
Target Start/End: Complemental strand, 31537079 - 31536940
Alignment:
Q  50 ttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcag 149  Q
    |||||||||||||||||||||||  | |||||  ||  ||||||||| ||||||||||||||||| || ||||| |||||||| ||||||| |||||||     
T  31537079 ttctgaccacacctgaagcattttctatcatctctaccacaaacattgctcttgtggcctttctcaccacacttataacaaacaatctcagaaggagcat 31536980  T
Q  150 ctctcctattgggcctcctctcatcattcagtctctgctt 189  Q
    ||||||| ||||| ||||| ||||||||||  ||||||||    
T  31536979 ctctcctcttgggtctcctatcatcattcatcctctgctt 31536940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 50 - 175
Target Start/End: Complemental strand, 20074791 - 20074666
Alignment:
Q  50 ttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcag 149  Q
    |||||||||||||||||||| ||| ||||||| ||| |||||||||| ||||||||||||||||| || ||||||||||| || |||||||  ||||||     
T  20074791 ttctgaccacacctgaagcacttcctctcatctttactacaaacattgctcttgtggcctttctcaccacacttgtaacacacaatctcagtgggagcat 20074692  T
Q  150 ctctcctattgggcctcctctcatca 175  Q
    ||||||| ||  ||||||| ||||||    
T  20074691 ctctcctcttaagcctcctgtcatca 20074666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 50 - 175
Target Start/End: Complemental strand, 38909908 - 38909783
Alignment:
Q  50 ttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcag 149  Q
    |||||||||||||||||||| ||| | |||||  |   ||||||||||||||||||||||||||| || |||||||| ||||| |||||| ||||||||     
T  38909908 ttctgaccacacctgaagcacttcctatcatctcttccacaaacattactcttgtggcctttctcaccacacttgtagcaaacaatctcaacaggagcat 38909809  T
Q  150 ctctcctattgggcctcctctcatca 175  Q
    ||||||| ||||||||||| ||||||    
T  38909808 ctctcctcttgggcctcctatcatca 38909783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 50 - 175
Target Start/End: Original strand, 48426181 - 48426306
Alignment:
Q  50 ttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcag 149  Q
    |||||||||||||||||||| ||| | |||||  |   ||||||||||||||||||||||||||| || |||||||| ||||| |||||| ||||||||     
T  48426181 ttctgaccacacctgaagcacttcctatcatctcttccacaaacattactcttgtggcctttctcaccacacttgtagcaaacaatctcaacaggagcat 48426280  T
Q  150 ctctcctattgggcctcctctcatca 175  Q
    ||||||| ||||||||||| ||||||    
T  48426281 ctctcctcttgggcctcctatcatca 48426306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 50 - 175
Target Start/End: Original strand, 37680357 - 37680482
Alignment:
Q  50 ttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcag 149  Q
    |||||||||||||||||||| ||| | |||||  |   ||||||||||||||||||||||||||| || |||||||| ||||| |||||| |||||| |     
T  37680357 ttctgaccacacctgaagcacttcctatcatctcttccacaaacattactcttgtggcctttctcaccacacttgtagcaaacaatctcaacaggagtat 37680456  T
Q  150 ctctcctattgggcctcctctcatca 175  Q
    ||||||| ||||||||||| ||||||    
T  37680457 ctctcctcttgggcctcctatcatca 37680482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 89 - 188
Target Start/End: Original strand, 18273114 - 18273213
Alignment:
Q  89 caaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattcagtctctgct 188  Q
    |||||||||||||||||||| ||||| || |||||||||||||| ||||||| |||| || |||| || || || |||||||||||||||| ||| ||||    
T  18273114 caaacattactcttgtggcccttctcaccacacttgtaacaaacaatctcagtaggaacatctcttctcttaggtctcctctcatcattcaatctttgct 18273213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 88 - 148
Target Start/End: Complemental strand, 21228600 - 21228540
Alignment:
Q  88 acaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagca 148  Q
    ||||||||||||||||||||||||||| || || ||| ||||||| ||||| |||||||||    
T  21228600 acaaacattactcttgtggcctttctcgccacagttgaaacaaacaatctccgcaggagca 21228540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 50 - 179
Target Start/End: Complemental strand, 20853842 - 20853713
Alignment:
Q  50 ttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcag 149  Q
    |||||||| || ||||| |||||||||||||| |  || ||| |||||||||||||||| ||| | || || ||||||||||| |  ||| ||||||||     
T  20853842 ttctgaccgcatctgaaacatttcttctcatcttgggtgcaagcattactcttgtggcccttcacaccacatttgtaacaaacaacatcaacaggagcat 20853743  T
Q  150 ctctcctattgggcctcctctcatcattca 179  Q
     |||||  || |||  ||||||||||||||    
T  20853742 ttctccccttaggctgcctctcatcattca 20853713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 100; Significance: 1e-49; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 50 - 189
Target Start/End: Original strand, 263517 - 263656
Alignment:
Q  50 ttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcag 149  Q
    |||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||| || |||||  ||||||| |||||||||||||||     
T  263517 ttctgaccacacctgaagcacttcttctcatccttggtacaaacattactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcat 263616  T
Q  150 ctctcctattgggcctcctctcatcattcagtctctgctt 189  Q
    ||||||||  ||||||||||||||||||||||||||||||    
T  263617 ctctcctaacgggcctcctctcatcattcagtctctgctt 263656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 98; Significance: 2e-48; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 14 - 179
Target Start/End: Complemental strand, 9821 - 9656
Alignment:
Q  14 acatcaccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttct 113  Q
    ||||| || ||||| ||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||  ||| ||||||||||||||||| ||||    
T  9821 acatctccccgcttacaatcaactagggtgtgtcctttctgaccacacctgaagcacttcttctcatccttatcacagacattactcttgtggcccttct 9722  T
Q  114 ctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattca 179  Q
    | || |||||||| ||||| || |||||||||||| ||||||| || |||||||||||||||||||    
T  9721 caccacacttgtagcaaacaatatcagcaggagcatctctcctgtttggcctcctctcatcattca 9656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0348 (Bit Score: 96; Significance: 3e-47; HSPs: 2)
Name: scaffold0348
Description:

Target: scaffold0348; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 14 - 189
Target Start/End: Complemental strand, 4898 - 4723
Alignment:
Q  14 acatcaccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttct 113  Q
    |||||||||||||||||||||  ||   |||| || ||||| |||||||||||||| ||||||||||| || ||||||||||||||||||||||||||||    
T  4898 acatcaccacgcttgcaatcagctaacatgtgacccttctgtccacacctgaagcacttcttctcatctttggtacaaacattactcttgtggcctttct 4799  T
Q  114 ctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattcagtctctgctt 189  Q
      || ||||| ||||| || ||||||||||||||| |||||||||| ||||||||||||||||||||||| |||||    
T  4798 ggccacacttataacagactatctcagcaggagcatctctcctatttggcctcctctcatcattcagtctttgctt 4723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0348; HSP #2
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 57 - 183
Target Start/End: Complemental strand, 17490 - 17364
Alignment:
Q  57 cacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcagctctcct 156  Q
    ||||||| ||||| |||||||||||||| ||||||||||||||||||||||||||||| || ||||| |||||||| ||||||||||||||| |||||||    
T  17490 cacacctaaagcacttcttctcatccttggtacaaacattactcttgtggcctttctcgccacacttataacaaactatctcagcaggagcatctctcct 17391  T
Q  157 attgggcctcctctcatcattcagtct 183  Q
    ||| |||||||||||||||||||||||    
T  17390 attcggcctcctctcatcattcagtct 17364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 96; Significance: 3e-47; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 50 - 189
Target Start/End: Original strand, 203672 - 203811
Alignment:
Q  50 ttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcag 149  Q
    |||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||| || |||||  ||||||| |||||| ||||||||     
T  203672 ttctgaccacacctgaagcacttcttctcatccttggtacaaacattactcttgtggcctttctcgccacacttaaaacaaactatctcaccaggagcat 203771  T
Q  150 ctctcctattgggcctcctctcatcattcagtctctgctt 189  Q
    ||||||||  ||||||||||||||||||||||||||||||    
T  203772 ctctcctaacgggcctcctctcatcattcagtctctgctt 203811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203 (Bit Score: 94; Significance: 4e-46; HSPs: 1)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 94; E-Value: 4e-46
Query Start/End: Original strand, 16 - 153
Target Start/End: Complemental strand, 901 - 764
Alignment:
Q  16 atcaccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctct 115  Q
    |||||||||||||||||||  ||| ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||| ||||||||||      
T  901 atcaccacgcttgcaatcagctagagtgtgtcctttctgaccacacctgaagcacttcttctcatctttagtacaaacattactcttatggcctttcttg 802  T
Q  116 cctcacttgtaacaaacgatctcagcaggagcagctct 153  Q
    || |||||||||||||| ||||||||||||||| ||||    
T  801 ccacacttgtaacaaacaatctcagcaggagcatctct 764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0367 (Bit Score: 93; Significance: 2e-45; HSPs: 1)
Name: scaffold0367
Description:

Target: scaffold0367; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 41 - 189
Target Start/End: Complemental strand, 9043 - 8895
Alignment:
Q  41 gtgtgtcctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcag 140  Q
    ||||||||||||||||||||||||||||| |||||||||||||||  ||| |||||||||||||||| |||||| || |||||||| ||||| |||| ||    
T  9043 gtgtgtcctttctgaccacacctgaagcacttcttctcatccttatcacagacattactcttgtggcttttctcaccacacttgtagcaaacaatcttag 8944  T
Q  141 caggagcagctctcctattgggcctcctctcatcattcagtctctgctt 189  Q
    ||| |||| ||||||| ||||||||||||||||||||||| ||||||||    
T  8943 cagaagcatctctcctcttgggcctcctctcatcattcagcctctgctt 8895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0765 (Bit Score: 88; Significance: 2e-42; HSPs: 1)
Name: scaffold0765
Description:

Target: scaffold0765; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 50 - 189
Target Start/End: Complemental strand, 6270 - 6131
Alignment:
Q  50 ttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcag 149  Q
    |||||||||||||||||||| |||||||||||||| |||||||| |||||||||||||||||||| || |||||  ||||||| |||||  ||||||||     
T  6270 ttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcgacaggagcat 6171  T
Q  150 ctctcctattgggcctcctctcatcattcagtctctgctt 189  Q
    |||||||||| ||||||||||||||||||||||| |||||    
T  6170 ctctcctattcggcctcctctcatcattcagtctttgctt 6131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0239 (Bit Score: 88; Significance: 2e-42; HSPs: 1)
Name: scaffold0239
Description:

Target: scaffold0239; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 50 - 189
Target Start/End: Complemental strand, 9800 - 9661
Alignment:
Q  50 ttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcag 149  Q
    |||| ||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||| || |||||  ||||||| |||||||||||||||     
T  9800 ttctaaccacacctgaagcacttcttctcatccttggtacaaacattactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcat 9701  T
Q  150 ctctcctattgggcctcctctcatcattcagtctctgctt 189  Q
    ||||||||  |||||||||||||||||| |||||| ||||    
T  9700 ctctcctaacgggcctcctctcatcattaagtctcagctt 9661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 88; Significance: 2e-42; HSPs: 1)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 50 - 189
Target Start/End: Original strand, 40349 - 40488
Alignment:
Q  50 ttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcag 149  Q
    |||| ||||||||||||||| ||||| ||||| || ||||||||||||||||||||||||||||| || ||||| ||||| || |||||||||||||||     
T  40349 ttctaaccacacctgaagcacttcttatcatctttggtacaaacattactcttgtggcctttctcgccacacttataacagactatctcagcaggagcat 40448  T
Q  150 ctctcctattgggcctcctctcatcattcagtctctgctt 189  Q
    |||||||||| ||||||||||||||||||||||| |||||    
T  40449 ctctcctattcggcctcctctcatcattcagtctttgctt 40488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 87; Significance: 6e-42; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 87; E-Value: 6e-42
Query Start/End: Original strand, 15 - 177
Target Start/End: Complemental strand, 4501 - 4339
Alignment:
Q  15 catcaccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctc 114  Q
    ||||||||||||| ||||||  ||  |||||||||||||||||||||||||||||||||||||||||  ||  ||||||||||||||| |||||||||||    
T  4501 catcaccacgcttacaatcagctaatgtgtgtcctttctgaccacacctgaagcatttcttctcatctctatcacaaacattactcttttggcctttctc 4402  T
Q  115 tcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcatt 177  Q
     || |||||| | ||||| || |||| ||||||| ||||||| ||||||||||||||||||||    
T  4401 gccacacttgaagcaaacaatatcagtaggagcatctctcctcttgggcctcctctcatcatt 4339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0167 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0167
Description:

Target: scaffold0167; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 41 - 179
Target Start/End: Original strand, 5335 - 5473
Alignment:
Q  41 gtgtgtcctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcag 140  Q
    ||||||||||||| ||||||||||||||| ||||||||||| |||  ||| ||||||||| ||||||||||||| || |||||||| ||||| |||||||    
T  5335 gtgtgtcctttctaaccacacctgaagcacttcttctcatctttatcacagacattactcctgtggcctttctcgccgcacttgtagcaaacaatctcag 5434  T
Q  141 caggagcagctctcctattgggcctcctctcatcattca 179  Q
    |||||||| |||||||  |||||||||||||||||||||    
T  5435 caggagcatctctcctcgtgggcctcctctcatcattca 5473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1433 (Bit Score: 82; Significance: 6e-39; HSPs: 1)
Name: scaffold1433
Description:

Target: scaffold1433; HSP #1
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 41 - 186
Target Start/End: Complemental strand, 1333 - 1188
Alignment:
Q  41 gtgtgtcctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcag 140  Q
    ||||||||||||||||||||||||||||| |||||||||||  ||  |||| ||||||||||||||||||| || || |||||| ||||||  |||||||    
T  1333 gtgtgtcctttctgaccacacctgaagcacttcttctcatctctatcacaagcattactcttgtggcctttttcaccacacttgaaacaaattatctcag 1234  T
Q  141 caggagcagctctcctattgggcctcctctcatcattcagtctctg 186  Q
     ||||||| ||||||| ||||||||||||||||||||||| |||||    
T  1233 taggagcatctctcctcttgggcctcctctcatcattcagcctctg 1188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1299 (Bit Score: 82; Significance: 6e-39; HSPs: 1)
Name: scaffold1299
Description:

Target: scaffold1299; HSP #1
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 41 - 182
Target Start/End: Complemental strand, 1870 - 1729
Alignment:
Q  41 gtgtgtcctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcag 140  Q
    ||||||||||||||||||||||||||||| ||||||||||| || |||||||||||||| |||||||||||||| || ||||| || ||||  || ||||    
T  1870 gtgtgtcctttctgaccacacctgaagcacttcttctcatctttggtacaaacattacttttgtggcctttctcgccacacttatagcaaattatttcag 1771  T
Q  141 caggagcagctctcctattgggcctcctctcatcattcagtc 182  Q
    ||| |||| ||||||| |||||||| ||||||||||||||||    
T  1770 cagtagcatctctcctcttgggccttctctcatcattcagtc 1729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0404 (Bit Score: 82; Significance: 6e-39; HSPs: 1)
Name: scaffold0404
Description:

Target: scaffold0404; HSP #1
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 41 - 186
Target Start/End: Original strand, 8026 - 8171
Alignment:
Q  41 gtgtgtcctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcag 140  Q
    ||||||||||||||||||||||||||||| |||||||||||  ||  |||| ||||||||||||||||||| || || |||||| ||||||  |||||||    
T  8026 gtgtgtcctttctgaccacacctgaagcacttcttctcatctctatcacaagcattactcttgtggcctttttcaccacacttgaaacaaattatctcag 8125  T
Q  141 caggagcagctctcctattgggcctcctctcatcattcagtctctg 186  Q
     ||||||| ||||||| ||||||||||||||||||||||| |||||    
T  8126 taggagcatctctcctcttgggcctcctctcatcattcagcctctg 8171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 82; Significance: 6e-39; HSPs: 1)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 20 - 189
Target Start/End: Original strand, 16898 - 17067
Alignment:
Q  20 ccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctc 119  Q
    |||||||||||||||   |  ||||||||||||||||||||||| ||||| |||||||||||   |  ||| |||||||||||||||||||||||||| |    
T  16898 ccacgcttgcaatcagccaatgtgtgtcctttctgaccacacctaaagcacttcttctcatctcgatcacacacattactcttgtggcctttctctccac 16997  T
Q  120 acttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattcagtctctgctt 189  Q
    ||||| ||||||  ||||||| ||||||| ||||||| || ||||||||||||||||||||| |||||||    
T  16998 acttgaaacaaataatctcagtaggagcatctctcctcttaggcctcctctcatcattcagtttctgctt 17067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 82; Significance: 6e-39; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 20 - 177
Target Start/End: Original strand, 34598 - 34755
Alignment:
Q  20 ccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctc 119  Q
    |||||||| ||||||| ||  ||||||||||||| ||||||||||||||| |||||||||||  ||  ||| ||||||||||||||||||||||| || |    
T  34598 ccacgcttacaatcaactaatgtgtgtcctttctaaccacacctgaagcacttcttctcatctctatcacagacattactcttgtggcctttctcaccac 34697  T
Q  120 acttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcatt 177  Q
    ||||| ||||||| || |||| ||||||| ||||||| ||||||||||||||||||||    
T  34698 acttgaaacaaacaatgtcagtaggagcatctctcctcttgggcctcctctcatcatt 34755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 41 - 180
Target Start/End: Complemental strand, 567 - 428
Alignment:
Q  41 gtgtgtcctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcag 140  Q
    ||||||||||||||||||||||||||||| ||||||||||| || |||||||||||||| |||||||||||||| || |||||  | ||||| |||||||    
T  567 gtgtgtcctttctgaccacacctgaagcacttcttctcatctttggtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatctcag 468  T
Q  141 caggagcagctctcctattgggcctcctctcatcattcag 180  Q
     ||||||| ||||||| ||||| || ||||||||||||||    
T  467 taggagcatctctcctcttgggtcttctctcatcattcag 428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 80; Significance: 1e-37; HSPs: 21)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 20 - 175
Target Start/End: Original strand, 20345428 - 20345583
Alignment:
Q  20 ccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctc 119  Q
    ||||||||||| |||| |||  |||| || |||||||||||||||||||| ||| | ||||| |||  ||||||||||||||||||| ||||||| || |    
T  20345428 ccacgcttgcattcaactagactgtgacccttctgaccacacctgaagcacttcctatcatctttaccacaaacattactcttgtgggctttctcaccac 20345527  T
Q  120 acttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatca 175  Q
    ||||||||||||| ||||||||||||||| ||||||| ||||||||||| ||||||    
T  20345528 acttgtaacaaacaatctcagcaggagcatctctcctcttgggcctcctatcatca 20345583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 14 - 189
Target Start/End: Complemental strand, 17266562 - 17266387
Alignment:
Q  14 acatcaccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttct 113  Q
    |||||||| |||||||||||   |||  |||| || ||||| |||||||||||||| |||||||||||||  |||||||| ||||||||||| |||||||    
T  17266562 acatcaccgcgcttgcaatcggctagcatgtgacccttctgtccacacctgaagcacttcttctcatcctcggtacaaacgttactcttgtgacctttct 17266463  T
Q  114 ctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattcagtctctgctt 189  Q
    | || |||||  |||| || ||||||||||||||| | ||| || | ||||||||||||||||| |||||||||||    
T  17266462 cgccacacttaaaacacactatctcagcaggagcatccctcttactcggcctcctctcatcattaagtctctgctt 17266387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 20 - 179
Target Start/End: Complemental strand, 23078127 - 23077968
Alignment:
Q  20 ccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctc 119  Q
    |||||||| || |||  |||||||||||||||||||||||||||||| |||||| |||||||  ||  |||| |||| || ||||||||||| || || |    
T  23078127 ccacgcttacattcagctagggtgtgtcctttctgaccacacctgaaacatttcctctcatctctaccacaagcattgcttttgtggcctttttcaccac 23078028  T
Q  120 acttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattca 179  Q
    ||||| |||| || ||||||||||||||| ||||||| ||||||||||| ||||||||||    
T  23078027 acttgaaacatacaatctcagcaggagcatctctcctcttgggcctcctatcatcattca 23077968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 51 - 179
Target Start/End: Original strand, 22505856 - 22505984
Alignment:
Q  51 tctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcagc 150  Q
    ||||||||||||||||||| ||| |||| || |||  ||||||||| ||||||||||||||||| || |||||||||||||| ||||||| ||||||| |    
T  22505856 tctgaccacacctgaagcacttcctctcgtctttaccacaaacattgctcttgtggcctttctcaccacacttgtaacaaacaatctcagaaggagcatc 22505955  T
Q  151 tctcctattgggcctcctctcatcattca 179  Q
    |||||| || |||||||| ||||||||||    
T  22505956 tctcctcttaggcctcctatcatcattca 22505984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 41 - 173
Target Start/End: Complemental strand, 23563369 - 23563237
Alignment:
Q  41 gtgtgtcctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcag 140  Q
    ||||||||||||||||||||||||||||| |||||||||||  ||  ||| |||||||||||||||||||| || || |||||| | ||||| || ||||    
T  23563369 gtgtgtcctttctgaccacacctgaagcacttcttctcatctctatcacagacattactcttgtggcctttttcaccacacttgaagcaaacaatgtcag 23563270  T
Q  141 caggagcagctctcctattgggcctcctctcat 173  Q
     ||||||| ||||||| ||||||||||||||||    
T  23563269 taggagcatctctcctcttgggcctcctctcat 23563237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 50 - 175
Target Start/End: Original strand, 25851248 - 25851373
Alignment:
Q  50 ttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcag 149  Q
    |||||||||||||||||||| ||| | ||||| |||  ||||||||||||||||||||||||||| || |||||||| ||||| |||||| || |||||     
T  25851248 ttctgaccacacctgaagcacttcctatcatctttaccacaaacattactcttgtggcctttctcaccacacttgtagcaaacaatctcaacaagagcat 25851347  T
Q  150 ctctcctattgggcctcctctcatca 175  Q
    ||||||| ||||||||||| ||||||    
T  25851348 ctctcctcttgggcctcctatcatca 25851373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 50 - 175
Target Start/End: Complemental strand, 14884183 - 14884058
Alignment:
Q  50 ttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcag 149  Q
    |||||||||||||||||||| ||| | |||||  |   ||| ||||||||||||||||||||||| || |||||||||||||| |||||||| ||||||     
T  14884183 ttctgaccacacctgaagcacttcctatcatctctcccacagacattactcttgtggcctttctcaccacacttgtaacaaacaatctcagctggagcat 14884084  T
Q  150 ctctcctattgggcctcctctcatca 175  Q
    ||||||| ||||||||||| ||||||    
T  14884083 ctctcctcttgggcctcctatcatca 14884058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 89 - 188
Target Start/End: Original strand, 23669847 - 23669946
Alignment:
Q  89 caaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattcagtctctgct 188  Q
    |||||||||||||||||||||||||| || |||| |||  |||| ||||||||||||||| ||||||| || || |||||||||||||||| ||| ||||    
T  23669847 caaacattactcttgtggcctttctcaccacactggtaggaaacaatctcagcaggagcatctctcctcttaggtctcctctcatcattcaatctttgct 23669946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 16 - 186
Target Start/End: Complemental strand, 16258262 - 16258092
Alignment:
Q  16 atcaccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctct 115  Q
    ||||||||||||||| |||  ||  || || |||||||  ||||| | |||||| |||||||| ||   | | |||||||||||||||||||| |||||     
T  16258262 atcaccacgcttgcattcagctattgtatgccctttcttcccacatcggaagcacttcttctcctcaccattgcaaacattactcttgtggcccttctca 16258163  T
Q  116 cctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattcagtctctg 186  Q
    || |||||||| ||||| |||||||||||| || ||||||| || || |||||||||||| ||| ||||||    
T  16258162 ccacacttgtagcaaacaatctcagcaggatcatctctcctcttaggtctcctctcatcagtcaatctctg 16258092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 89 - 186
Target Start/End: Complemental strand, 22591908 - 22591811
Alignment:
Q  89 caaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattcagtctctg 186  Q
    |||||||||||||||||||| ||||| || |||||||| ||||| |||||||||||| || ||||||| || || |||||||||||| ||| ||||||    
T  22591908 caaacattactcttgtggcccttctcaccacacttgtagcaaacaatctcagcaggatcatctctcctcttaggtctcctctcatcagtcaatctctg 22591811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 89 - 186
Target Start/End: Complemental strand, 22595463 - 22595366
Alignment:
Q  89 caaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattcagtctctg 186  Q
    |||||||||||||||||||| ||||| || |||||||| ||||| |||||||||||| || ||||||| || || |||||||||||| ||| ||||||    
T  22595463 caaacattactcttgtggcccttctcaccacacttgtagcaaacaatctcagcaggatcatctctcctcttaggtctcctctcatcagtcaatctctg 22595366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 88 - 189
Target Start/End: Complemental strand, 21870432 - 21870331
Alignment:
Q  88 acaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattcagtctctgc 187  Q
    ||||||||||||||||||| ||||||| || |||||| | ||||  ||||||| ||||||| ||||||| || ||||||||| ||||||||| | |||||    
T  21870432 acaaacattactcttgtggtctttctcaccacacttgaagcaaattatctcagtaggagcatctctcctcttaggcctcctcccatcattcaatttctgc 21870333  T
Q  188 tt 189  Q
    ||    
T  21870332 tt 21870331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 88 - 189
Target Start/End: Complemental strand, 21874712 - 21874611
Alignment:
Q  88 acaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattcagtctctgc 187  Q
    ||||||||||||||||||| ||||||| || |||||| | ||||  ||||||| ||||||| ||||||| || ||||||||| ||||||||| | |||||    
T  21874712 acaaacattactcttgtggtctttctcaccacacttgaagcaaattatctcagtaggagcatctctcctcttaggcctcctcccatcattcaatttctgc 21874613  T
Q  188 tt 189  Q
    ||    
T  21874612 tt 21874611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 91 - 190
Target Start/End: Complemental strand, 21983328 - 21983229
Alignment:
Q  91 aacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattcagtctctgcttc 190  Q
    |||||||||||||||||| ||||| || ||| | || ||||| |||||||||||| || |||| || || || |||||||||||||||| ||| ||||||    
T  21983328 aacattactcttgtggcccttctcaccacacctatagcaaacaatctcagcaggaacatctcttctcttaggtctcctctcatcattcaatctttgcttc 21983229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 47 - 132
Target Start/End: Original strand, 20824626 - 20824711
Alignment:
Q  47 cctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaac 132  Q
    ||||||||||| || ||||| |||||||||||||| | ||| ||| |||||||||||||||| ||| | || || |||||||||||    
T  20824626 cctttctgaccgcatctgaaacatttcttctcatcttgagtgcaagcattactcttgtggcccttcacaccacatttgtaacaaac 20824711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 47 - 132
Target Start/End: Complemental strand, 28892137 - 28892052
Alignment:
Q  47 cctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaac 132  Q
    ||||||||||| || ||||| |||||||||||||| | ||| ||| |||||||||||||||| ||| | || || |||||||||||    
T  28892137 cctttctgaccgcatctgaaacatttcttctcatcttgagtgcaagcattactcttgtggcccttcacaccacatttgtaacaaac 28892052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 88 - 148
Target Start/End: Original strand, 18782346 - 18782406
Alignment:
Q  88 acaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagca 148  Q
    ||||||||||||||||||||||||||| || || ||| ||||||| ||||| |||||||||    
T  18782346 acaaacattactcttgtggcctttctcgccacagttgaaacaaacaatctccgcaggagca 18782406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 91 - 179
Target Start/End: Complemental strand, 21561176 - 21561088
Alignment:
Q  91 aacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattca 179  Q
    |||||||||||||||||| ||||  || |||||| | ||||| |||||||||||| || |||| || || || ||||||||||||||||    
T  21561176 aacattactcttgtggcccttcttaccacacttgaagcaaacaatctcagcaggaacatctcttctcttaggtctcctctcatcattca 21561088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 92 - 188
Target Start/End: Original strand, 43122685 - 43122781
Alignment:
Q  92 acattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattcagtctctgct 188  Q
    |||||||||||||||||  |||| || |||||||| ||||| ||||| ||| || || ||||||| || || |||||||||||||||| ||| ||||    
T  43122685 acattactcttgtggcccctctcgccacacttgtagcaaacaatctctgcatgaacatctctcctcttaggtctcctctcatcattcaatctttgct 43122781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 132
Target Start/End: Original strand, 20779089 - 20779171
Alignment:
Q  50 ttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaac 132  Q
    |||||||| || ||||| |||||||||||||| |  || ||| |||||||||||||||| ||| | || || |||||||||||    
T  20779089 ttctgaccgcatctgaaacatttcttctcatcttgggtgcaagcattactcttgtggcccttcacaccacatttgtaacaaac 20779171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 148
Target Start/End: Original strand, 20803797 - 20803889
Alignment:
Q  56 ccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagca 148  Q
    ||||||| ||| ||||||||| | |||| ||  |||||||| ||||||||||||||||| ||  | ||| |||| || ||||| |||||||||    
T  20803797 ccacaccagaaacatttcttcacctcctcagggcaaacatttctcttgtggcctttctcaccataattgaaacagacaatctccgcaggagca 20803889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0317 (Bit Score: 79; Significance: 4e-37; HSPs: 1)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 41 - 179
Target Start/End: Original strand, 2913 - 3051
Alignment:
Q  41 gtgtgtcctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcag 140  Q
    |||||||| ||||| |||||||||||| | ||||||||||| |||  ||||||||||||||||||||||||||  || |||||||| ||||| ||||||     
T  2913 gtgtgtcccttctgtccacacctgaagaacttcttctcatctttatcacaaacattactcttgtggcctttcttaccacacttgtagcaaacaatctcaa 3012  T
Q  141 caggagcagctctcctattgggcctcctctcatcattca 179  Q
    |||||||| ||||||| ||||||||||||||||||||||    
T  3013 caggagcatctctcctcttgggcctcctctcatcattca 3051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0156 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 20 - 189
Target Start/End: Original strand, 37200 - 37369
Alignment:
Q  20 ccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctc 119  Q
    |||| ||| ||||||  ||| |||||||| |||||||||||||||||||| ||||||||||| |||  ||||||||||||||||||||||||||| || |    
T  37200 ccacacttacaatcagctagtgtgtgtcccttctgaccacacctgaagcacttcttctcatctttatcacaaacattactcttgtggcctttctcgccac 37299  T
Q  120 acttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattcagtctctgctt 189  Q
    ||||| | ||||  || |||| |||||   ||||||| |||||||||||||||||||||| |||||||||    
T  37300 acttgaagcaaaaaatatcagtaggagtgtctctcctcttgggcctcctctcatcattcaatctctgctt 37369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2062 (Bit Score: 77; Significance: 6e-36; HSPs: 1)
Name: scaffold2062
Description:

Target: scaffold2062; HSP #1
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 17 - 189
Target Start/End: Complemental strand, 918 - 746
Alignment:
Q  17 tcaccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctc 116  Q
    ||||||||||| ||||||  ||| ||||||||||||||||||||| ||||||| |||||||||||  ||  ||| |||||||||||||||||||| || |    
T  918 tcaccacgcttacaatcagctagtgtgtgtcctttctgaccacacatgaagcacttcttctcatctctatcacagacattactcttgtggcctttttcac 819  T
Q  117 ctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattcagtctctgctt 189  Q
    | |||||| | ||||| || ||   ||||||| ||||||| ||||||||||||||||||||||||| ||||||    
T  818 cacacttgaagcaaacaatatccataggagcatctctcctcttgggcctcctctcatcattcagtcgctgctt 746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0751 (Bit Score: 77; Significance: 6e-36; HSPs: 1)
Name: scaffold0751
Description:

Target: scaffold0751; HSP #1
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 14 - 189
Target Start/End: Original strand, 5436 - 5610
Alignment:
Q  14 acatcaccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagcatttcttctcatccttagt-acaaacattactcttgtggcctttc 112  Q
    ||||| |||||||| ||||||  ||  ||||||||||||||||||||||||||||| ||||||||||| |  || ||||||||||||||||||||||||     
T  5436 acatccccacgcttacaatcagctaaagtgtgtcctttctgaccacacctgaagcacttcttctcatc-tcggtcacaaacattactcttgtggcctttt 5534  T
Q  113 tctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattcagtctctgctt 189  Q
    || || |||||| ||||||| || |||| ||||||| ||||||| || ||||||||||||||||||| |||||||||    
T  5535 tcaccacacttgaaacaaacaatatcagtaggagcatctctcctctt-ggcctcctctcatcattcaatctctgctt 5610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0706 (Bit Score: 77; Significance: 6e-36; HSPs: 1)
Name: scaffold0706
Description:

Target: scaffold0706; HSP #1
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 41 - 189
Target Start/End: Complemental strand, 5231 - 5083
Alignment:
Q  41 gtgtgtcctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcag 140  Q
    |||||||| |||||||||||||||||||| |||||||||||||||  ||| |||||||||||||||||||| || || |||||||| ||||| |||||||    
T  5231 gtgtgtcccttctgaccacacctgaagcacttcttctcatccttatcacagacattactcttgtggcctttttcgccacacttgtagcaaacaatctcag 5132  T
Q  141 caggagcagctctcctattgggcctcctctcatcattcagtctctgctt 189  Q
    |||||||| |||||||  | |||| |||||||| |||||| || |||||    
T  5131 caggagcatctctcctcctaggccacctctcattattcagcctttgctt 5083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1530 (Bit Score: 76; Significance: 2e-35; HSPs: 1)
Name: scaffold1530
Description:

Target: scaffold1530; HSP #1
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 54 - 189
Target Start/End: Original strand, 799 - 934
Alignment:
Q  54 gaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcagctct 153  Q
    |||||||||||||| | ||||||||||| |||  ||| ||||||||||||||||||||||  || |||||||| ||||| ||||||||||||||| ||||    
T  799 gaccacacctgaagtacttcttctcatctttatcacagacattactcttgtggcctttctagccacacttgtagcaaacaatctcagcaggagcatctct 898  T
Q  154 cctattgggcctcctctcatcattcagtctctgctt 189  Q
    ||| || ||||||||||||||||||| |||||||||    
T  899 cctcttaggcctcctctcatcattcaatctctgctt 934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 76; Significance: 2e-35; HSPs: 2)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 41 - 148
Target Start/End: Complemental strand, 65320 - 65213
Alignment:
Q  41 gtgtgtcctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcag 140  Q
    ||||||||||||||||||||||||||||| || |||||||| || ||||||||||||||||||||||||||||| || |||||||||||||| | |||||    
T  65320 gtgtgtcctttctgaccacacctgaagcactttttctcatctttggtacaaacattactcttgtggcctttctcgccacacttgtaacaaacaacctcag 65221  T
Q  141 caggagca 148  Q
    ||||||||    
T  65220 caggagca 65213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053; HSP #2
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 14 - 189
Target Start/End: Complemental strand, 62821 - 62646
Alignment:
Q  14 acatcaccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttct 113  Q
    ||||| |||||||| ||||||  ||  |||||| |||||||||||||||| ||||| ||||||||||| |    ||| ||||||||||||||||||||||    
T  62821 acatccccacgcttacaatcagctaaagtgtgtactttctgaccacacctaaagcacttcttctcatcatggtcacatacattactcttgtggcctttct 62722  T
Q  114 ctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattcagtctctgctt 189  Q
    | || |||||| |  |||| || |||| ||||||| ||||||| || ||||||||||||||||||| |||||||||    
T  62721 caccacacttgaattaaacaatatcagtaggagcatctctcctcttaggcctcctctcatcattcaatctctgctt 62646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1426 (Bit Score: 74; Significance: 4e-34; HSPs: 1)
Name: scaffold1426
Description:

Target: scaffold1426; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 42 - 175
Target Start/End: Complemental strand, 1628 - 1495
Alignment:
Q  42 tgtgtcctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagc 141  Q
    ||||||| |||||||||||||||||||| ||| ||||||| |||  |||||||||||||||||| |||||||| || |||||||||||||| |||||||     
T  1628 tgtgtcccttctgaccacacctgaagcacttcctctcatctttaccacaaacattactcttgtgtcctttctcaccacacttgtaacaaacaatctcaga 1529  T
Q  142 aggagcagctctcctattgggcctcctctcatca 175  Q
    ||||||| ||||||| || |||||||| ||||||    
T  1528 aggagcatctctcctcttaggcctcctatcatca 1495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 74; Significance: 4e-34; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 20 - 177
Target Start/End: Complemental strand, 926 - 769
Alignment:
Q  20 ccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctc 119  Q
    |||||||| ||||||  ||| |||| |||||||||||||||||||||||| |||||||||||  ||  |||||| ||||||||||||||||| || || |    
T  926 ccacgcttacaatcagctagagtgtatcctttctgaccacacctgaagcacttcttctcatctctatcacaaacgttactcttgtggcctttttcaccac 827  T
Q  120 acttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcatt 177  Q
    ||||| | ||||| ||||| | ||||||| ||||||| ||||||||||||||||||||    
T  826 acttgaagcaaacaatctcggtaggagcatctctcctcttgggcctcctctcatcatt 769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 74; Significance: 4e-34; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 41 - 189
Target Start/End: Complemental strand, 63541 - 63393
Alignment:
Q  41 gtgtgtcctttctgaccacacctgaagcatttcttctcatccttagt-acaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctca 139  Q
    |||||||||||||||||||||||||| || ||||||||||| |  || |||||||||||||||||||||||| || || |||||| ||||||| || |||    
T  63541 gtgtgtcctttctgaccacacctgaaacacttcttctcatc-tcggtcacaaacattactcttgtggcctttatcaccacacttgaaacaaacaatatca 63443  T
Q  140 gcaggagcagctctcctattgggcctcctctcatcattcagtctctgctt 189  Q
    | ||||||| ||||||| |||||||||||||||||||||| ||| |||||    
T  63442 gtaggagcatctctcctcttgggcctcctctcatcattcaatctttgctt 63393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 74; Significance: 4e-34; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 20 - 177
Target Start/End: Original strand, 6066 - 6223
Alignment:
Q  20 ccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctc 119  Q
    |||||||||||||||  ||| |||||||||||||||||||| |||||||| |||||||||||  ||  ||| |||||||||||||||||||| || || |    
T  6066 ccacgcttgcaatcagctagtgtgtgtcctttctgaccacatctgaagcacttcttctcatctctatcacagacattactcttgtggcctttttcaccac 6165  T
Q  120 acttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcatt 177  Q
    ||||| | ||||| || |||| | ||||| ||||||| ||||||||||||||||||||    
T  6166 acttgaagcaaacaatgtcagtaagagcatctctcctcttgggcctcctctcatcatt 6223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 74; Significance: 4e-34; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 20 - 189
Target Start/End: Original strand, 153753 - 153922
Alignment:
Q  20 ccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctc 119  Q
    |||||||| ||||||  ||  ||||||||||||||||||||||||||||| |||||||||||  ||  ||| ||||||||||| |||| ||| || || |    
T  153753 ccacgcttacaatcagctaatgtgtgtcctttctgaccacacctgaagcacttcttctcatctctatcacagacattactcttatggcttttttcaccac 153852  T
Q  120 acttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattcagtctctgctt 189  Q
    ||||| | ||||| |||||||  |||||| ||||||| ||||||||||||||||||||||||| ||||||    
T  153853 acttgaagcaaacaatctcagtgggagcatctctcctcttgggcctcctctcatcattcagtcgctgctt 153922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 74; Significance: 4e-34; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 42 - 179
Target Start/End: Complemental strand, 514374 - 514237
Alignment:
Q  42 tgtgtcctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagc 141  Q
    ||||||| |||||||||||||||||||| ||| |||| || |||  ||||||||| ||||||||||||||||| || |||||||||||||| |||||||     
T  514374 tgtgtcccttctgaccacacctgaagcacttcctctcgtctttaccacaaacattgctcttgtggcctttctcaccacacttgtaacaaacaatctcaga 514275  T
Q  142 aggagcagctctcctattgggcctcctctcatcattca 179  Q
    ||||||| ||||||| || |||||||| ||||||||||    
T  514274 aggagcatctctcctcttaggcctcctatcatcattca 514237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 72; Significance: 6e-33; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 20 - 178
Target Start/End: Original strand, 50366 - 50524
Alignment:
Q  20 ccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagcatttcttctcatccttagt-acaaacattactcttgtggcctttctctcct 118  Q
    |||||||| ||||||  || ||||||||||||||||||||||||||| || ||||||||||| |  || ||||||||||||||||||| |||| || ||     
T  50366 ccacgcttacaatcagctaaggtgtgtcctttctgaccacacctgaaacacttcttctcatc-tcggtcacaaacattactcttgtggtctttttcacca 50464  T
Q  119 cacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattc 178  Q
    |||||| ||||||| || |||| ||||||| ||||||| |||||||||||||||||||||    
T  50465 cacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcctctcatcattc 50524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1032 (Bit Score: 71; Significance: 2e-32; HSPs: 1)
Name: scaffold1032
Description:

Target: scaffold1032; HSP #1
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 20 - 190
Target Start/End: Complemental strand, 858 - 688
Alignment:
Q  20 ccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctc 119  Q
    |||||||| ||||||  ||| |||||||| |||||||||||||||||||| |||||||||||  ||  |||||||||||||||||||||||| || || |    
T  858 ccacgcttacaatcagctagtgtgtgtcccttctgaccacacctgaagcacttcttctcatctctatcacaaacattactcttgtggcctttttcaccac 759  T
Q  120 acttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattcagtctctgcttc 190  Q
    ||||| | ||| | || || | ||||||| ||||||| |||||||||||||||||||| |  |||||||||    
T  758 acttgaagcaatcaatgtccgtaggagcatctctcctcttgggcctcctctcatcatttaacctctgcttc 688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0523 (Bit Score: 68; Significance: 1e-30; HSPs: 2)
Name: scaffold0523
Description:

Target: scaffold0523; HSP #1
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 14 - 189
Target Start/End: Original strand, 5695 - 5870
Alignment:
Q  14 acatcaccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttct 113  Q
    ||||| |||||||| ||||||  ||  ||||||||||||||||||||||| ||||| |||||||||||   |  ||| || |||||||||||||||||||    
T  5695 acatccccacgcttacaatcagctaaagtgtgtcctttctgaccacacctaaagcacttcttctcatctcgatcacacacgttactcttgtggcctttct 5794  T
Q  114 ctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattcagtctctgctt 189  Q
    | || |||||| | ||||  ||||||| ||||||| ||||||| ||  |||||||||||||||||| |||||||||    
T  5795 caccacacttgaagcaaattatctcagtaggagcatctctcctcttaagcctcctctcatcattcaatctctgctt 5870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0523; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 50 - 175
Target Start/End: Complemental strand, 11756 - 11631
Alignment:
Q  50 ttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcag 149  Q
    |||||||||||||||||||| ||| | |||||  |   ||| ||||||||||||||||||||||  || |||||||| || || |||||| | || |||     
T  11756 ttctgaccacacctgaagcacttcctatcatctcttccacatacattactcttgtggcctttcttaccacacttgtatcatacaatctcatctggtgcat 11657  T
Q  150 ctctcctattgggcctcctctcatca 175  Q
    ||||||| |||||| |||| ||||||    
T  11656 ctctcctcttgggcttcctatcatca 11631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2165 (Bit Score: 66; Significance: 2e-29; HSPs: 1)
Name: scaffold2165
Description:

Target: scaffold2165; HSP #1
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 42 - 179
Target Start/End: Complemental strand, 824 - 687
Alignment:
Q  42 tgtgtcctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagc 141  Q
    ||||||| || ||||||||||||||||| ||| |||| || |||  ||||||||| ||||||||||||||||| ||  ||||||||||||| |||||||     
T  824 tgtgtcccttttgaccacacctgaagcacttcctctcgtctttaccacaaacattgctcttgtggcctttctcaccaaacttgtaacaaacaatctcaga 725  T
Q  142 aggagcagctctcctattgggcctcctctcatcattca 179  Q
    ||||||| ||||||| || |||||||| ||||||||||    
T  724 aggagcatctctcctcttaggcctcctatcatcattca 687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0434 (Bit Score: 66; Significance: 2e-29; HSPs: 1)
Name: scaffold0434
Description:

Target: scaffold0434; HSP #1
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 88 - 189
Target Start/End: Complemental strand, 5877 - 5776
Alignment:
Q  88 acaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattcagtctctgc 187  Q
    |||||||||||||||||||||||| || || ||||||||| |||| || |||| ||||||| ||||||| ||||||||||||||||||||||||||||||    
T  5877 acaaacattactcttgtggcctttttcaccacacttgtaataaacaatatcagtaggagcatctctcctcttgggcctcctctcatcattcagtctctgc 5778  T
Q  188 tt 189  Q
    ||    
T  5777 tt 5776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 66; Significance: 2e-29; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 20 - 177
Target Start/End: Complemental strand, 327 - 170
Alignment:
Q  20 ccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctc 119  Q
    |||||||| ||||||  ||| ||||||| ||||||||||||| ||||||| |||||||||||  ||  ||| ||||||||||||||||||||||| || |    
T  327 ccacgcttacaatcagctagtgtgtgtcttttctgaccacacatgaagcacttcttctcatctctatcacagacattactcttgtggcctttctcgccac 228  T
Q  120 acttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcatt 177  Q
    ||||| | ||||| || |||| ||||||  |||| || ||||||||||||||||||||    
T  227 acttgaagcaaacaatatcagtaggagcctctctgctcttgggcctcctctcatcatt 170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 65; Significance: 9e-29; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 41 - 177
Target Start/End: Complemental strand, 564 - 428
Alignment:
Q  41 gtgtgtcctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcag 140  Q
    ||||||||||||||||||||||||||||| |||||||||||  ||  ||||||| |||| |||||||||||||| || |||||| ||||||| || ||      
T  564 gtgtgtcctttctgaccacacctgaagcacttcttctcatctgtatcacaaacactacttttgtggcctttctcgccacacttgaaacaaacaatatcta 465  T
Q  141 caggagcagctctcctattgggcctcctctcatcatt 177  Q
     ||||||| ||||||| |||||||| |||||||||||    
T  464 taggagcatctctcctcttgggccttctctcatcatt 428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 65; Significance: 9e-29; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 14 - 186
Target Start/End: Original strand, 51906 - 52078
Alignment:
Q  14 acatcaccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttct 113  Q
    ||||||||| ||||||||| |  ||  ||||||||||||| ||||||||| ||||| |||||||||||   |  ||| ||||||||||||||||||||||    
T  51906 acatcaccatgcttgcaataagctaaagtgtgtcctttcttaccacacctaaagcacttcttctcatctcgatcacatacattactcttgtggcctttct 52005  T
Q  114 ctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattcagtctctg 186  Q
    | || |||||| |||| |  ||||||| ||||||| |||||||  | |||||||||||||||||||| |||||    
T  52006 caccacacttgaaacagataatctcagtaggagcatctctcctcctaggcctcctctcatcattcagcctctg 52078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 64; Significance: 3e-28; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 41 - 179
Target Start/End: Original strand, 42980 - 43118
Alignment:
Q  41 gtgtgtcctttctgaccacacctgaagcatttcttctcatccttagt-acaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctca 139  Q
    |||||||||||||||| |||||| ||||| ||||||||||| |  || ||||||||||||||||||||||||||| |  |||||| ||||||  ||||||    
T  42980 gtgtgtcctttctgactacacctaaagcacttcttctcatc-tcggtcacaaacattactcttgtggcctttctcacaacacttgaaacaaattatctca 43078  T
Q  140 gcaggagcagctctcctattgggcctcctctcatcattca 179  Q
    | ||||||| ||||||| || |||||||||||||||||||    
T  43079 gtaggagcatctctcctcttaggcctcctctcatcattca 43118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1517 (Bit Score: 63; Significance: 1e-27; HSPs: 1)
Name: scaffold1517
Description:

Target: scaffold1517; HSP #1
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 37 - 179
Target Start/End: Complemental strand, 1513 - 1371
Alignment:
Q  37 tagggtgtgtcctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatc 136  Q
    |||||||||||| |||| ||||||||| || |||||| || ||||  ||  |||| |||| |||||||||||||| || || ||||||||||| || |||    
T  1513 tagggtgtgtcccttctaaccacacctaaaacatttcctcacatctctaccacaagcattgctcttgtggcctttttcaccacacttgtaacagacaatc 1414  T
Q  137 tcagcaggagcagctctcctattgggcctcctctcatcattca 179  Q
    |||||||||||| ||||||| ||||||||||| ||||||||||    
T  1413 tcagcaggagcatctctcctcttgggcctcctatcatcattca 1371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1845 (Bit Score: 62; Significance: 5e-27; HSPs: 1)
Name: scaffold1845
Description:

Target: scaffold1845; HSP #1
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 62 - 179
Target Start/End: Complemental strand, 1305 - 1188
Alignment:
Q  62 ctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgg 161  Q
    |||||||| ||| |||||||  ||  ||||||||| ||||||||||||||||| || |||||||||||||| ||||||||||||||| ||||||| ||||    
T  1305 ctgaagcacttcctctcatctctaccacaaacattgctcttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctcttgg 1206  T
Q  162 gcctcctctcatcattca 179  Q
    | ||||| ||||||||||    
T  1205 gtctcctatcatcattca 1188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 62; Significance: 5e-27; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 50 - 175
Target Start/End: Original strand, 752 - 877
Alignment:
Q  50 ttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcag 149  Q
    |||||||| ||||||||||| ||| ||||||| |||  ||||||||| |||||||||||||| || || |||||||||||||| ||||||| |||||||     
T  752 ttctgaccgcacctgaagcacttcctctcatctttaccacaaacattgctcttgtggcctttttcaccacacttgtaacaaacaatctcagaaggagcat 851  T
Q  150 ctctcctattgggcctcctctcatca 175  Q
    ||||||| || |||||||| ||||||    
T  852 ctctcctcttaggcctcctatcatca 877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 62; Significance: 5e-27; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 50 - 175
Target Start/End: Original strand, 42026 - 42151
Alignment:
Q  50 ttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcag 149  Q
    |||||||||||||||||||| ||| | |||||  |   ||||||||||||||||||||||||||| || |||||||| ||||| |||||| ||||||||     
T  42026 ttctgaccacacctgaagcacttcctatcatctcttccacaaacattactcttgtggcctttctcaccacacttgtagcaaacaatctcaacaggagcat 42125  T
Q  150 ctctcctattgggcctcctctcatca 175  Q
    ||||||| ||||||||||| ||||||    
T  42126 ctctcctcttgggcctcctatcatca 42151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310 (Bit Score: 61; Significance: 2e-26; HSPs: 1)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 43 - 179
Target Start/End: Original strand, 11261 - 11397
Alignment:
Q  43 gtgtcctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagca 142  Q
    |||||| |||||||||||||||||||| ||| |||||||  ||  |||| |||| |||||||||||||| || || |||||||||||||| ||||||| |    
T  11261 gtgtcccttctgaccacacctgaagcacttcctctcatctctaccacaagcattgctcttgtggcctttttcaccacacttgtaacaaacaatctcagaa 11360  T
Q  143 ggagcagctctcctattgggcctcctctcatcattca 179  Q
    |||||| ||||||| || || ||||| ||||||||||    
T  11361 ggagcatctctcctcttaggactcctatcatcattca 11397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 60; Significance: 8e-26; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 60; E-Value: 8e-26
Query Start/End: Original strand, 14 - 189
Target Start/End: Original strand, 29782 - 29957
Alignment:
Q  14 acatcaccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttct 113  Q
    ||||||||||||||||| |||  ||  ||||||||||||   ||||||| ||| || ||||||||||| |   |||||||||||||||||||||| || |    
T  29782 acatcaccacgcttgcactcagctattgtgtgtcctttcgtcccacaccggaaacacttcttctcatcatggttacaaacattactcttgtggccctttt 29881  T
Q  114 ctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattcagtctctgctt 189  Q
    | || |||||| || | || ||||||  ||||||| |||||||  | |||||||||||||||||||||||||||||    
T  29882 caccacacttgaaatagactatctcaataggagcatctctcctcctaggcctcctctcatcattcagtctctgctt 29957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0708 (Bit Score: 59; Significance: 3e-25; HSPs: 1)
Name: scaffold0708
Description:

Target: scaffold0708; HSP #1
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 20 - 190
Target Start/End: Complemental strand, 5188 - 5018
Alignment:
Q  20 ccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctc 119  Q
    |||||||| || |||  |||||||||||||||||||||||||||||| |||||| ||||||   ||  |||| ||||  | ||||||||||| ||  | |    
T  5188 ccacgcttacattcagctagggtgtgtcctttctgaccacacctgaaacatttcctctcatttctaccacaagcattgtttttgtggcctttttcatcac 5089  T
Q  120 acttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattcagtctctgcttc 190  Q
     ||| |||||||| || |||||||||||| ||||||| ||||||||||| ||||||||||  |||||||||    
T  5088 tcttttaacaaacaatttcagcaggagcatctctcctcttgggcctcctatcatcattcatcctctgcttc 5018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 59; Significance: 3e-25; HSPs: 2)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 16 - 182
Target Start/End: Original strand, 115819 - 115985
Alignment:
Q  16 atcaccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctct 115  Q
    |||||||||||||||||||  ||    ||| || ||||| |||||||||||||| ||||||||||| || |||||||||||||| ||||||||||||||     
T  115819 atcaccacgcttgcaatcagctaacacgtgacccttctgtccacacctgaagcacttcttctcatctttggtacaaacattacttttgtggcctttctcg 115918  T
Q  116 cctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattcagtc 182  Q
    || |||||  | ||||| || ||||||||||   |||| |  |||||||| ||||||||||||||||    
T  115919 ccacacttaaagcaaactatttcagcaggagtgtctcttcccttgggccttctctcatcattcagtc 115985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 47 - 148
Target Start/End: Complemental strand, 93910 - 93809
Alignment:
Q  47 cctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggag 146  Q
    ||||||||||| || ||||| |||||||||||||| | ||| ||| |||||||||||||||| ||| | || || ||||||||||| | |||| ||||||    
T  93910 cctttctgaccgcatctgaaacatttcttctcatcttgagtgcaagcattactcttgtggcccttcacaccacatttgtaacaaacaacctcaacaggag 93811  T
Q  147 ca 148  Q
    ||    
T  93810 ca 93809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0276 (Bit Score: 58; Significance: 1e-24; HSPs: 1)
Name: scaffold0276
Description:

Target: scaffold0276; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 50 - 175
Target Start/End: Complemental strand, 23936 - 23811
Alignment:
Q  50 ttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcag 149  Q
    |||||||||||||||||||| ||| | |||||  |   ||| ||||||||||||||||||||||| || |||||||| ||||| |||||| ||||||||     
T  23936 ttctgaccacacctgaagcacttcctatcatctcttccacatacattactcttgtggcctttctcaccacacttgtatcaaacaatctcaacaggagcat 23837  T
Q  150 ctctcctattgggcctcctctcatca 175  Q
    ||||||| ||||||||||| ||||||    
T  23836 ctctcctcttgggcctcctatcatca 23811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190 (Bit Score: 58; Significance: 1e-24; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 42 - 179
Target Start/End: Complemental strand, 30347 - 30210
Alignment:
Q  42 tgtgtcctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagc 141  Q
    |||||||||||| ||||||||| || |||||| ||| |||  ||  |||| |||| |||||||||||||| || || ||||| |||||||| ||||||||    
T  30347 tgtgtcctttcttaccacacctaaaacatttcctcttatctctaccacaagcattgctcttgtggcctttttcaccacacttataacaaacaatctcagc 30248  T
Q  142 aggagcagctctcctattgggcctcctctcatcattca 179  Q
    ||||||| || |||| ||||||||||| ||||||||||    
T  30247 aggagcatctttcctcttgggcctcctgtcatcattca 30210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104 (Bit Score: 57; Significance: 5e-24; HSPs: 1)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 14 - 186
Target Start/End: Complemental strand, 43468 - 43296
Alignment:
Q  14 acatcaccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttct 113  Q
    ||||| |||||||| ||||||  ||  |||||||||||||| |||||||| ||||| |||||||||||   |  ||| ||||||||||||||||| || |    
T  43468 acatccccacgcttacaatcagctaaagtgtgtcctttctgtccacacctaaagcacttcttctcatctcgatcacacacattactcttgtggccctttt 43369  T
Q  114 ctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattcagtctctg 186  Q
    | |  |||||| |||| || ||||||  ||||||| ||||||| || |||||||||||||||||||| |||||    
T  43368 cacgacacttgaaacagacaatctcattaggagcatctctcctcttaggcctcctctcatcattcagcctctg 43296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0335 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 20 - 179
Target Start/End: Complemental strand, 4347 - 4188
Alignment:
Q  20 ccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctc 119  Q
    |||||||||||||||   |  ||||||||||||||||||||||| ||||| |||||||||||   |  ||| |||||||| |||| | ||||||| || |    
T  4347 ccacgcttgcaatcagccaatgtgtgtcctttctgaccacacctaaagcacttcttctcatctcgatcacacacattacttttgtagtctttctcaccac 4248  T
Q  120 acttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattca 179  Q
    ||||| | ||||  ||||||| ||||||| ||||||| || |||||||||||||||||||    
T  4247 acttgaagcaaataatctcagtaggagcatctctcctcttaggcctcctctcatcattca 4188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 20 - 186
Target Start/End: Original strand, 70369 - 70535
Alignment:
Q  20 ccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagcatttcttctcatccttagt-acaaacattactcttgtggcctttctctcct 118  Q
    |||||||||||||||   |  |||||||||||||| ||||| ||||| || ||||||||||| |  || ||| ||||||||||||||||||||||| ||     
T  70369 ccacgcttgcaatcagccaatgtgtgtcctttctgtccacatctgaaacacttcttctcatc-tcggtcacacacattactcttgtggcctttctcacca 70467  T
Q  119 cacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattcagtctctg 186  Q
    |||||  | ||||  ||||||| ||||||| ||||||| || |||||||||||||||||||| |||||    
T  70468 cacttaaagcaaataatctcagtaggagcatctctcctcttaggcctcctctcatcattcagcctctg 70535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 55; Significance: 8e-23; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 37 - 179
Target Start/End: Complemental strand, 67134 - 66992
Alignment:
Q  37 tagggtgtgtcctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatc 136  Q
    |||| ||||||| || |||||||||||||| |||||| ||||||   ||  ||||||||| |||||||||||||| || || ||||| |||||||| |||    
T  67134 taggttgtgtcccttttgaccacacctgaaacatttcctctcatgtctaccacaaacattgctcttgtggcctttttcaccacacttataacaaacaatc 67035  T
Q  137 tcagcaggagcagctctcctattgggcctcctctcatcattca 179  Q
    || | ||||||| ||||||| ||||| ||||| ||||||||||    
T  67034 tcggaaggagcatctctcctcttgggtctcctatcatcattca 66992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1914 (Bit Score: 52; Significance: 5e-21; HSPs: 1)
Name: scaffold1914
Description:

Target: scaffold1914; HSP #1
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 50 - 189
Target Start/End: Complemental strand, 1243 - 1104
Alignment:
Q  50 ttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcag 149  Q
    ||||| ||||| ||||| || |||||||||||||| |||||||| ||||||||||| |||||||| || |||||  | || || |||||||||| ||||     
T  1243 ttctgtccacatctgaaacacttcttctcatccttggtacaaacgttactcttgtgacctttctcgccacacttaaagcatactatctcagcagaagcac 1144  T
Q  150 ctctcctattgggcctcctctcatcattcagtctctgctt 189  Q
    |  || || | ||||||||||||||||| |||||||||||    
T  1143 ccttcttactcggcctcctctcatcattaagtctctgctt 1104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1056 (Bit Score: 52; Significance: 5e-21; HSPs: 1)
Name: scaffold1056
Description:

Target: scaffold1056; HSP #1
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 44 - 186
Target Start/End: Original strand, 2005 - 2147
Alignment:
Q  44 tgtcctttctgaccacacctgaagcatttcttctcatccttagt-acaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagca 142  Q
    ||||||||||| |||||||| ||||| ||||||||||| |  || ||| ||||||||||||||||||||||| || |||||| | ||||  || |||| |    
T  2005 tgtcctttctgtccacacctaaagcacttcttctcatc-tcggtcacacacattactcttgtggcctttctcaccacacttgaagcaaataatttcagta 2103  T
Q  143 ggagcagctctcctattgggcctcctctcatcattcagtctctg 186  Q
    |||||| ||| ||| || |||||||||||||||||||| |||||    
T  2104 ggagcatctcacctcttaggcctcctctcatcattcagcctctg 2147  T

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Target: scaffold0009 (Bit Score: 52; Significance: 5e-21; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 20 - 179
Target Start/End: Original strand, 251880 - 252039
Alignment:
Q  20 ccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctc 119  Q
    |||||||| || |||  ||| ||||||||||||||||||||||| || |||||| |||||||  ||  |||| |||  || ||||||||||| || || |    
T  251880 ccacgcttacattcagctagtgtgtgtcctttctgaccacacctaaaacatttcctctcatctctaccacaagcatagcttttgtggcctttttcaccac 251979  T
Q  120 acttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattca 179  Q
    ||||| |||| || |||||| || ||||| ||||||| ||||||||||| ||||||||||    
T  251980 acttgaaacacacaatctcaacaagagcatctctcctcttgggcctcctatcatcattca 252039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 148
Target Start/End: Complemental strand, 229827 - 229767
Alignment:
Q  88 acaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagca 148  Q
    ||||||||| ||||||||||||||||| || || ||| ||||||| ||||| |||||||||    
T  229827 acaaacattgctcttgtggcctttctcaccacaattgaaacaaacaatctccgcaggagca 229767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 71 - 185
Target Start/End: Original strand, 115936 - 116050
Alignment:
Q  71 ttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctct 170  Q
    |||||||||||  ||  |||||||||||||||||||||||| || || ||| || ||||||| || |||| ||||||| | ||||| || ||||||||||    
T  115936 ttcttctcatctctatcacaaacattactcttgtggcctttttcaccacacatgaaacaaacaatatcagtaggagcatccctcctcttaggcctcctct 116035  T
Q  171 catcattcagtctct 185  Q
    |||||||||||||||    
T  116036 catcattcagtctct 116050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 49; Significance: 3e-19; HSPs: 4)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 20 - 124
Target Start/End: Complemental strand, 12455 - 12351
Alignment:
Q  20 ccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctc 119  Q
    |||||||| ||||||  ||  ||||||||||||||| ||||||| ||||| ||||||||||| |||  | ||||||||||||||||||||||||| || |    
T  12455 ccacgcttacaatcatctaatgtgtgtcctttctgagcacacctaaagcacttcttctcatctttacgaaaaacattactcttgtggcctttctcgccac 12356  T
Q  120 acttg 124  Q
    |||||    
T  12355 acttg 12351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261; HSP #2
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 20 - 124
Target Start/End: Complemental strand, 20635 - 20531
Alignment:
Q  20 ccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctc 119  Q
    |||||||| ||||||  ||  ||||||||||||||| ||||||| ||||| ||||||||||| |||  | ||||||||||||||||||||||||| || |    
T  20635 ccacgcttacaatcatctaatgtgtgtcctttctgagcacacctaaagcacttcttctcatctttacgaaaaacattactcttgtggcctttctcgccac 20536  T
Q  120 acttg 124  Q
    |||||    
T  20535 acttg 20531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261; HSP #3
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 150 - 189
Target Start/End: Complemental strand, 12327 - 12288
Alignment:
Q  150 ctctcctattgggcctcctctcatcattcagtctctgctt 189  Q
    ||||||| |||||||| |||||||||||||||||||||||    
T  12327 ctctcctcttgggcctactctcatcattcagtctctgctt 12288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261; HSP #4
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 150 - 189
Target Start/End: Complemental strand, 20507 - 20468
Alignment:
Q  150 ctctcctattgggcctcctctcatcattcagtctctgctt 189  Q
    ||||||| |||||||| |||||||||||||||||||||||    
T  20507 ctctcctcttgggcctactctcatcattcagtctctgctt 20468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0609 (Bit Score: 48; Significance: 1e-18; HSPs: 2)
Name: scaffold0609
Description:

Target: scaffold0609; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 89 - 188
Target Start/End: Original strand, 1269 - 1368
Alignment:
Q  89 caaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattcagtctctgct 188  Q
    |||||||||||||||||||| ||||| || |||||||||||||| ||||||| |||| || | || || || || |||||||||||||||| ||||||||    
T  1269 caaacattactcttgtggcccttctcaccacacttgtaacaaacaatctcagtaggaacatcccttctcttaggtctcctctcatcattcaatctctgct 1368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0609; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 188
Target Start/End: Original strand, 7908 - 7986
Alignment:
Q  110 ttctctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattcagtctctgct 188  Q
    ||||| || |||||||||||||| ||||||| |||| || | || || || || |||||||||||||||| ||||||||    
T  7908 ttctcaccacacttgtaacaaacaatctcagtaggaacatcccttctcttaggtctcctctcatcattcaatctctgct 7986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0405 (Bit Score: 47; Significance: 5e-18; HSPs: 1)
Name: scaffold0405
Description:

Target: scaffold0405; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 14 - 180
Target Start/End: Original strand, 5857 - 6023
Alignment:
Q  14 acatcaccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttct 113  Q
    ||||| |||||||||||||||  ||  |||||||||||||| ||||| ||||| || ||||||| |||   |  ||| ||||||||||||||||||||||    
T  5857 acatccccacgcttgcaatcagctaatgtgtgtcctttctgtccacatctgaaacacttcttcttatctcaatcacacacattactcttgtggcctttct 5956  T
Q  114 ctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattcag 180  Q
    | || |||||| || | ||  |||||  ||| ||| |||||||  | ||||||||||||||||||||    
T  5957 caccacacttgaaatagacagtctcattaggggcatctctcctcctaggcctcctctcatcattcag 6023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 98 - 179
Target Start/End: Complemental strand, 33337 - 33256
Alignment:
Q  98 ctcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattca 179  Q
    |||||||||||||| || || |||||| ||||||| || ||| |||||||| ||||||| ||||||||||||||||||||||    
T  33337 ctcttgtggcctttttcaccacacttgaaacaaacaatttcaacaggagcatctctcctcttgggcctcctctcatcattca 33256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 20 - 137
Target Start/End: Original strand, 30195 - 30312
Alignment:
Q  20 ccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctc 119  Q
    |||||||| || |||  |||| |||||| |||||||||||||||||| || ||| |||||||  ||  |||||| || || |||||||||||||| || |    
T  30195 ccacgcttacattcagctaggttgtgtcttttctgaccacacctgaatcacttcctctcatctctaccacaaacgttgcttttgtggcctttctcaccac 30294  T
Q  120 acttgtaacaaacgatct 137  Q
    ||||||||||||| ||||    
T  30295 acttgtaacaaacaatct 30312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0518 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0518
Description:

Target: scaffold0518; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 123 - 179
Target Start/End: Original strand, 2195 - 2251
Alignment:
Q  123 tgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattca 179  Q
    |||||||||| ||||||||||||||| ||||||||||  ||||||||||||||||||    
T  2195 tgtaacaaactatctcagcaggagcatctctcctattccgcctcctctcatcattca 2251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0490 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0490
Description:

Target: scaffold0490; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 109 - 189
Target Start/End: Original strand, 3215 - 3295
Alignment:
Q  109 tttctctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattcagtctctgctt 189  Q
    |||||| || |||||| | ||||  ||||||| ||||||| ||||||| |||||||||||||||||||||| |||||||||    
T  3215 tttctccccacacttgaagcaaataatctcagtaggagcatctctcctcttgggcctcctctcatcattcaatctctgctt 3295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0443 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0443
Description:

Target: scaffold0443; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 50 - 138
Target Start/End: Original strand, 12088 - 12176
Alignment:
Q  50 ttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctc 138  Q
    |||||||||||||||||||| ||| | |||||  |   ||||||||||||||||||||||||||| || |||||||| ||||| |||||    
T  12088 ttctgaccacacctgaagcacttcctatcatctcttccacaaacattactcttgtggcctttctcaccacacttgtagcaaacaatctc 12176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 93 - 179
Target Start/End: Complemental strand, 30983 - 30897
Alignment:
Q  93 cattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattca 179  Q
    |||||||||||||||| ||||| || |||||||| ||||| |||||||||||| || |||| || || |  ||||||||||||||||    
T  30983 cattactcttgtggcccttctcaccacacttgtagcaaacaatctcagcaggaacatctcttctcttagttctcctctcatcattca 30897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0865 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0865
Description:

Target: scaffold0865; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 92 - 189
Target Start/End: Complemental strand, 1243 - 1146
Alignment:
Q  92 acattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattcagtctctgctt 189  Q
    ||||||| |||||||||||| || || || ||  |||| || |||| || ||||||| |||||||  | |||||||||||||||||||||||||||||    
T  1243 acattacccttgtggcctttttcaccacatttaaaacagacaatcttagtaggagcatctctcctcctaggcctcctctcatcattcagtctctgctt 1146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0133 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0133
Description:

Target: scaffold0133; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 92 - 189
Target Start/End: Complemental strand, 28256 - 28159
Alignment:
Q  92 acattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattcagtctctgctt 189  Q
    ||||||| |||||||||||| || || || ||  |||| || |||| || ||||||| |||||||  | |||||||||||||||||||||||||||||    
T  28256 acattacccttgtggcctttttcaccacatttaaaacagacaatcttagtaggagcatctctcctcctaggcctcctctcatcattcagtctctgctt 28159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079 (Bit Score: 37; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 56 - 148
Target Start/End: Original strand, 36795 - 36887
Alignment:
Q  56 ccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagca 148  Q
    ||||||| ||| ||||||||| | ||||  | ||||||||| ||||||||||||||||| || || ||| |||| |||||||| |||||||||    
T  36795 ccacaccggaaacatttcttcacctcctctggacaaacattgctcttgtggcctttctcaccacaattgaaacagacgatctccgcaggagca 36887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0309 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0309
Description:

Target: scaffold0309; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 113
Target Start/End: Original strand, 12982 - 13081
Alignment:
Q  14 acatcaccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttct 113  Q
    ||||| |||||||| ||||||  ||  ||||||||||||||||||||||| ||||| |||||||| ||      ||| ||||||||||||||||||||||    
T  12982 acatccccacgcttacaatcagctaaagtgtgtcctttctgaccacacctaaagcacttcttctcgtcacggtcacatacattactcttgtggcctttct 13081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 179
Target Start/End: Complemental strand, 3863 - 3776
Alignment:
Q  92 acattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattca 179  Q
    |||||||||||||||||  |||| || |||||||| ||||| |||||| ||| | || ||||||| || || ||||||||||||||||    
T  3863 acattactcttgtggcccctctcgccacacttgtagcaaacaatctcaacagaaacatctctcctcttaggtctcctctcatcattca 3776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 88 - 179
Target Start/End: Complemental strand, 16584 - 16493
Alignment:
Q  88 acaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattca 179  Q
    |||| |||||||||||||||| ||||| || |||||||| ||||| | ||||||||||| | || || |  | |||||||||||||||||||    
T  16584 acaagcattactcttgtggcccttctcaccacacttgtagcaaacaacctcagcaggagtatctttctttctaggcctcctctcatcattca 16493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 87 - 176
Target Start/End: Original strand, 36156 - 36245
Alignment:
Q  87 tacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcat 176  Q
    |||| ||||||||||||||||||||||| || ||| |||| ||||| |||| || ||| ||| |||| || || || |||||||||||||    
T  36156 tacagacattactcttgtggcctttctcaccacacctgtagcaaacaatcttagtaggggcatctcttctcttaggtctcctctcatcat 36245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 148
Target Start/End: Original strand, 17489 - 17549
Alignment:
Q  88 acaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagca 148  Q
    ||||||||||||||||||||||||||| || || ||| |||| || ||||| |||||||||    
T  17489 acaaacattactcttgtggcctttctcaccacaattgaaacagacaatctccgcaggagca 17549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0289 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0289
Description:

Target: scaffold0289; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 70 - 148
Target Start/End: Original strand, 99 - 177
Alignment:
Q  70 tttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagca 148  Q
    ||||||| | |||| || ||||||||| ||||||||||||||||| || || ||| |||| || ||||| |||||||||    
T  99 tttcttcacctcctcaggacaaacattgctcttgtggcctttctcaccacaattgaaacagacaatctctgcaggagca 177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0181 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0181
Description:

Target: scaffold0181; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 114
Target Start/End: Complemental strand, 28935 - 28877
Alignment:
Q  56 ccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctc 114  Q
    ||||||| ||| ||||||||  | ||||||| ||||||||| |||||||||||||||||    
T  28935 ccacaccggaaacatttctttacctccttaggacaaacattgctcttgtggcctttctc 28877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 88 - 130
Target Start/End: Original strand, 171447 - 171489
Alignment:
Q  88 acaaacattactcttgtggcctttctctcctcacttgtaacaa 130  Q
    ||||||||||||||||||||||||||| || || |||||||||    
T  171447 acaaacattactcttgtggcctttctcaccacaattgtaacaa 171489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0605 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0605
Description:

Target: scaffold0605; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 50 - 179
Target Start/End: Original strand, 1571 - 1700
Alignment:
Q  50 ttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcag 149  Q
    |||||||| || ||||| |||||||||||||| |  || ||| |||||||||||||||| ||  | || || ||||||||||| |  ||| ||||||||     
T  1571 ttctgaccgcatctgaaacatttcttctcatcttgggtgcaagcattactcttgtggcccttaacaccacatttgtaacaaacaacatcaacaggagcat 1670  T
Q  150 ctctcctattgggcctcctctcatcattca 179  Q
     |||||  || |||  ||||||||||||||    
T  1671 ttctccccttaggctgcctctcatcattca 1700  T

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Target: scaffold0270 (Bit Score: 30; Significance: 0.00000007; HSPs: 2)
Name: scaffold0270
Description:

Target: scaffold0270; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 88 - 189
Target Start/End: Original strand, 7202 - 7303
Alignment:
Q  88 acaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattcagtctctgc 187  Q
    |||| |||||||||| ||||||||||| || ||  | || ||||| |||||| |||||||| || || |  | ||||||||||||||||||| ||| |||    
T  7202 acaagcattactcttatggcctttctcaccacaagtatagcaaacaatctcaacaggagcatctttctttctaggcctcctctcatcattcattctttgc 7301  T
Q  188 tt 189  Q
    ||    
T  7302 tt 7303  T

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Target: scaffold0270; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 88 - 189
Target Start/End: Original strand, 14332 - 14433
Alignment:
Q  88 acaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattcagtctctgc 187  Q
    |||| |||||||||| ||||||||||| || ||  | || ||||| |||||| |||||||| || || |  | ||||||||||||||||||| ||| |||    
T  14332 acaagcattactcttatggcctttctcaccacaagtatagcaaacaatctcaacaggagcatctttctttctaggcctcctctcatcattcattctttgc 14431  T
Q  188 tt 189  Q
    ||    
T  14432 tt 14433  T

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Target: scaffold0040 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 88 - 177
Target Start/End: Original strand, 18174 - 18263
Alignment:
Q  88 acaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcatt 177  Q
    |||| |||||||||| ||||||||||| || ||  |||| ||||| |||||||||| |||| || || |  | |||||||||||||||||    
T  18174 acaagcattactcttatggcctttctcaccacaagtgtagcaaacaatctcagcagtagcatctttctttcttggcctcctctcatcatt 18263  T

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Target: scaffold1881 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold1881
Description:

Target: scaffold1881; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 88 - 148
Target Start/End: Complemental strand, 455 - 395
Alignment:
Q  88 acaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagca 148  Q
    ||||||||| ||||||||||||||||| || || ||| ||||||| ||||| | |||||||    
T  455 acaaacattgctcttgtggcctttctcgccacaattgaaacaaacaatctccgtaggagca 395  T

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Target: scaffold0546 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0546
Description:

Target: scaffold0546; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 88 - 148
Target Start/End: Original strand, 208 - 268
Alignment:
Q  88 acaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagca 148  Q
    ||||||||||||||||||||||||| | || || ||| ||||||| || || |||||||||    
T  208 acaaacattactcttgtggcctttcccgccacagttgaaacaaacaatatccgcaggagca 268  T

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Target: scaffold0509 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0509
Description:

Target: scaffold0509; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 145
Target Start/End: Original strand, 12162 - 12214
Alignment:
Q  93 cattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcagga 145  Q
    |||||||||||||||| ||||| || |||||||| ||||| ||||||| ||||    
T  12162 cattactcttgtggcccttctcaccacacttgtagcaaacaatctcagtagga 12214  T

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Target: scaffold0285 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0285
Description:

Target: scaffold0285; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 88 - 148
Target Start/End: Original strand, 5327 - 5387
Alignment:
Q  88 acaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagca 148  Q
    ||||||||||||||| ||||| ||||| || || ||| ||||||| ||||| |||||||||    
T  5327 acaaacattactcttatggcccttctcgccacagttgaaacaaacaatctccgcaggagca 5387  T

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Target: scaffold0109 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 88 - 148
Target Start/End: Complemental strand, 13099 - 13039
Alignment:
Q  88 acaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagca 148  Q
    ||||||||||||||||||||||||| | || || ||| ||||||| || || |||||||||    
T  13099 acaaacattactcttgtggcctttcccgccacagttgaaacaaacaatatccgcaggagca 13039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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