View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12642_low_7 (Length: 375)
Name: NF12642_low_7
Description: NF12642
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12642_low_7 |
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Alignment Details
Target: chr8 (Bit Score: 147; Significance: 2e-77; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 2351214 - 2351068
Alignment:
| Q |
1 |
aaagggtgagagtgagagcggtaacattactaatgcagtatcaatgccatatactaacttcttgtgacttctgtgtatctgtaacacacgccaacctcca |
100 |
Q |
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| T |
2351214 |
aaagggtgagagtgagagcggtaacattactaatgcagtatcaatgccatatactaacttcttgtgacttctgtgtatctgtaacacacgccaacctcca |
2351115 |
T |
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| Q |
101 |
caacaataactcattccctctttcacttcaacccaccggaaaaagca |
147 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2351114 |
caacaataactcattccctctttcacttcaacccaccggaaaaagca |
2351068 |
T |
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