View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12645_high_1 (Length: 466)

Name: NF12645_high_1
Description: NF12645
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12645_high_1
NF12645_high_1
[»] chr1 (37 HSPs)
chr1 (22-197)||(8116187-8116362)
chr1 (264-384)||(8116002-8116122)
chr1 (379-452)||(3572560-3572633)
chr1 (380-452)||(6911497-6911569)
chr1 (383-452)||(2430500-2430569)
chr1 (383-452)||(49822916-49822985)
chr1 (381-452)||(2632856-2632927)
chr1 (378-449)||(5806285-5806356)
chr1 (381-452)||(46666712-46666783)
chr1 (382-452)||(12190175-12190245)
chr1 (383-452)||(1597341-1597410)
chr1 (383-452)||(6978774-6978843)
chr1 (383-452)||(9115841-9115910)
chr1 (387-452)||(36361786-36361851)
chr1 (384-452)||(14788727-14788795)
chr1 (384-452)||(39930461-39930529)
chr1 (385-452)||(25789767-25789834)
chr1 (381-452)||(47037461-47037532)
chr1 (383-452)||(8332018-8332087)
chr1 (383-452)||(39329612-39329681)
chr1 (383-452)||(52630777-52630846)
chr1 (384-452)||(20260086-20260154)
chr1 (381-452)||(9831867-9831938)
chr1 (382-452)||(38964677-38964747)
chr1 (379-452)||(5518499-5518572)
chr1 (382-446)||(35187466-35187530)
chr1 (381-452)||(4683371-4683442)
chr1 (380-447)||(32202327-32202394)
chr1 (386-452)||(32824926-32824992)
chr1 (387-452)||(51445083-51445148)
chr1 (381-452)||(48916019-48916090)
chr1 (384-439)||(1007764-1007819)
chr1 (381-450)||(50190762-50190831)
chr1 (393-452)||(37436630-37436689)
chr1 (390-452)||(30241013-30241075)
chr1 (381-434)||(29091688-29091741)
chr1 (383-439)||(52699465-52699521)
[»] chr3 (22 HSPs)
chr3 (377-452)||(24574578-24574653)
chr3 (384-452)||(28124436-28124504)
chr3 (381-452)||(26849025-26849096)
chr3 (383-452)||(40908268-40908337)
chr3 (379-452)||(6231496-6231569)
chr3 (380-449)||(8476304-8476373)
chr3 (383-452)||(11239119-11239188)
chr3 (383-452)||(44952311-44952380)
chr3 (384-441)||(9320448-9320505)
chr3 (383-452)||(20297796-20297865)
chr3 (380-452)||(20414461-20414533)
chr3 (388-452)||(33217917-33217981)
chr3 (384-452)||(47114857-47114925)
chr3 (383-452)||(43132156-43132225)
chr3 (386-452)||(1099201-1099267)
chr3 (383-452)||(31435922-31435991)
chr3 (387-452)||(48339760-48339825)
chr3 (383-446)||(43715307-43715370)
chr3 (381-430)||(29512704-29512753)
chr3 (411-450)||(9320407-9320446)
chr3 (403-452)||(31611004-31611053)
chr3 (382-435)||(45826796-45826849)
[»] chr5 (19 HSPs)
chr5 (380-452)||(4765556-4765628)
chr5 (381-452)||(12970527-12970598)
chr5 (383-452)||(19065504-19065573)
chr5 (380-452)||(18412212-18412284)
chr5 (382-452)||(27481360-27481430)
chr5 (383-452)||(22935911-22935980)
chr5 (383-452)||(28602558-28602627)
chr5 (381-452)||(555703-555774)
chr5 (381-452)||(14206818-14206889)
chr5 (380-452)||(29543011-29543083)
chr5 (384-452)||(36703877-36703945)
chr5 (387-452)||(11855658-11855723)
chr5 (388-452)||(6091718-6091782)
chr5 (390-451)||(8406898-8406959)
chr5 (386-446)||(32535946-32536006)
chr5 (383-435)||(42012178-42012230)
chr5 (386-439)||(20962606-20962659)
chr5 (405-452)||(8646412-8646459)
chr5 (386-435)||(26637045-26637094)
[»] chr4 (34 HSPs)
chr4 (380-452)||(35999693-35999765)
chr4 (384-452)||(48518891-48518959)
chr4 (383-452)||(27555417-27555486)
chr4 (383-452)||(39730292-39730361)
chr4 (383-452)||(45747795-45747864)
chr4 (381-441)||(25916032-25916092)
chr4 (380-452)||(40435907-40435979)
chr4 (381-452)||(48879332-48879403)
chr4 (378-452)||(27762893-27762967)
chr4 (384-452)||(13229989-13230057)
chr4 (381-452)||(6279918-6279989)
chr4 (381-452)||(23686794-23686865)
chr4 (383-452)||(41859046-41859115)
chr4 (383-452)||(45596275-45596344)
chr4 (384-452)||(34049597-34049665)
chr4 (381-452)||(39835304-39835375)
chr4 (383-446)||(55967999-55968062)
chr4 (383-452)||(18405233-18405302)
chr4 (383-452)||(25932448-25932517)
chr4 (383-452)||(42773955-42774024)
chr4 (383-452)||(43723271-43723340)
chr4 (388-452)||(27942750-27942814)
chr4 (380-452)||(41744216-41744288)
chr4 (384-451)||(32953531-32953598)
chr4 (383-446)||(39498838-39498901)
chr4 (383-446)||(39502177-39502240)
chr4 (385-452)||(47670369-47670436)
chr4 (386-452)||(18931760-18931826)
chr4 (377-439)||(30415922-30415984)
chr4 (383-452)||(936133-936202)
chr4 (388-441)||(34237424-34237477)
chr4 (379-452)||(50672903-50672973)
chr4 (389-452)||(10400810-10400873)
chr4 (396-452)||(8322252-8322308)
[»] scaffold0006 (1 HSPs)
scaffold0006 (377-452)||(201928-202003)
[»] chr6 (11 HSPs)
chr6 (381-452)||(7053567-7053638)
chr6 (383-452)||(14171016-14171085)
chr6 (381-452)||(2657703-2657774)
chr6 (381-452)||(8029336-8029407)
chr6 (384-452)||(1317021-1317089)
chr6 (387-452)||(18897924-18897989)
chr6 (379-451)||(7344078-7344150)
chr6 (391-452)||(16968928-16968989)
chr6 (378-435)||(3869525-3869582)
chr6 (383-452)||(6705764-6705833)
chr6 (384-417)||(10246222-10246255)
[»] chr2 (34 HSPs)
chr2 (381-452)||(346342-346413)
chr2 (381-452)||(39995128-39995199)
chr2 (381-452)||(6171794-6171865)
chr2 (381-452)||(11071608-11071679)
chr2 (377-452)||(37533955-37534030)
chr2 (378-452)||(42674655-42674729)
chr2 (383-452)||(21737399-21737468)
chr2 (383-452)||(41729129-41729198)
chr2 (384-452)||(9733846-9733914)
chr2 (380-452)||(14777494-14777566)
chr2 (382-452)||(5770108-5770178)
chr2 (383-452)||(34356699-34356768)
chr2 (383-452)||(40950858-40950927)
chr2 (381-452)||(2050869-2050940)
chr2 (381-452)||(2521678-2521749)
chr2 (381-439)||(13760961-13761019)
chr2 (386-452)||(37192525-37192591)
chr2 (383-452)||(4559562-4559631)
chr2 (383-452)||(20426482-20426551)
chr2 (388-452)||(28311701-28311765)
chr2 (385-452)||(41750532-41750599)
chr2 (381-452)||(45409253-45409324)
chr2 (383-452)||(17965986-17966055)
chr2 (388-452)||(638596-638660)
chr2 (388-452)||(37233432-37233496)
chr2 (381-452)||(27357960-27358031)
chr2 (389-451)||(26310273-26310335)
chr2 (380-452)||(6571690-6571762)
chr2 (380-430)||(40570045-40570095)
chr2 (388-452)||(14832813-14832877)
chr2 (383-433)||(7007595-7007645)
chr2 (399-452)||(14253525-14253578)
chr2 (387-452)||(18713660-18713725)
chr2 (384-452)||(1988314-1988382)
[»] chr7 (35 HSPs)
chr7 (382-448)||(25098076-25098142)
chr7 (383-452)||(9946989-9947058)
chr7 (383-452)||(33378845-33378914)
chr7 (379-452)||(39554186-39554259)
chr7 (383-452)||(48314125-48314194)
chr7 (384-452)||(40212892-40212960)
chr7 (381-452)||(8419586-8419657)
chr7 (385-452)||(45265049-45265116)
chr7 (382-452)||(27213853-27213923)
chr7 (383-452)||(11329996-11330065)
chr7 (383-452)||(27248296-27248365)
chr7 (383-452)||(45045629-45045698)
chr7 (388-441)||(45448956-45449009)
chr7 (383-452)||(48160590-48160659)
chr7 (387-452)||(48341365-48341430)
chr7 (384-452)||(38544197-38544265)
chr7 (383-446)||(9814217-9814280)
chr7 (381-452)||(25924634-25924705)
chr7 (381-452)||(27419221-27419292)
chr7 (385-452)||(43949248-43949315)
chr7 (383-452)||(35488188-35488257)
chr7 (388-452)||(38396370-38396434)
chr7 (384-452)||(44566048-44566116)
chr7 (385-452)||(41632365-41632432)
chr7 (385-451)||(45723211-45723277)
chr7 (383-452)||(16825353-16825422)
chr7 (374-435)||(18824166-18824227)
chr7 (383-452)||(28904185-28904254)
chr7 (385-452)||(34930466-34930534)
chr7 (386-441)||(44820268-44820323)
chr7 (379-450)||(31921743-31921813)
chr7 (384-430)||(45440933-45440979)
chr7 (383-452)||(25045617-25045685)
chr7 (386-452)||(6656226-6656292)
chr7 (383-435)||(41684021-41684073)
[»] chr8 (24 HSPs)
chr8 (384-452)||(18298115-18298183)
chr8 (384-452)||(18726619-18726687)
chr8 (380-452)||(26062147-26062219)
chr8 (381-452)||(32660930-32661001)
chr8 (383-452)||(1554353-1554422)
chr8 (383-452)||(12710648-12710717)
chr8 (383-452)||(25837914-25837983)
chr8 (383-452)||(35818423-35818492)
chr8 (383-452)||(37392545-37392614)
chr8 (383-452)||(38132736-38132805)
chr8 (383-452)||(38364084-38364153)
chr8 (381-452)||(26601935-26602006)
chr8 (390-452)||(3050012-3050074)
chr8 (383-452)||(16313506-16313575)
chr8 (384-452)||(10896217-10896285)
chr8 (383-450)||(41228713-41228780)
chr8 (385-452)||(42755870-42755937)
chr8 (379-452)||(7317376-7317449)
chr8 (388-446)||(7931248-7931306)
chr8 (384-446)||(40197076-40197138)
chr8 (386-437)||(5020492-5020543)
chr8 (385-434)||(33444627-33444676)
chr8 (383-432)||(35394413-35394462)
chr8 (381-417)||(8635672-8635708)
[»] scaffold0189 (1 HSPs)
scaffold0189 (389-452)||(28957-29020)


Alignment Details
Target: chr1 (Bit Score: 172; Significance: 3e-92; HSPs: 37)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 172; E-Value: 3e-92
Query Start/End: Original strand, 22 - 197
Target Start/End: Complemental strand, 8116362 - 8116187
Alignment:
Q  22 caggattagtttcaaagagcctttaattctgtttttgtagctacaagaaacagaatgataggatgaaacagaaaataaggggtgaaacatattactgttg 121  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  8116362 caggattagtttcaaagagcctttaattctgtttttgtagctacaagaaatagaatgataggatgaaacagaaaataaggggtgaaacatattactgttg 8116263  T
Q  122 aattcatttgacggtgacaatgaaagtctttaaaataagagaaaggctgcttaggatagctgatttcagtttctag 197  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8116262 aattcatttgacggtgacaatgaaagtctttaaaataagagaaaggctgcttaggatagctgatttcagtttctag 8116187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 264 - 384
Target Start/End: Complemental strand, 8116122 - 8116002
Alignment:
Q  264 accaatccgtttctctttaaatcaatttgctttaatctatggaacttagttgagtttgcaaagaggaggttcgataaaccggacggagatgtgtggagcg 363  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8116122 accaatccgtttctctttaaatcaatttgctttaatctatggaacttagttgagtttgcaaagaggaggttcgataaaccggacggagatgtgtggagcg 8116023  T
Q  364 gaccacgagctccaaactaag 384  Q
    |||||||||||||||||||||    
T  8116022 gaccacgagctccaaactaag 8116002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 379 - 452
Target Start/End: Original strand, 3572560 - 3572633
Alignment:
Q  379 actaagggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatg 452  Q
    ||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||||||    
T  3572560 actaagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatatgcctatg 3572633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 380 - 452
Target Start/End: Complemental strand, 6911569 - 6911497
Alignment:
Q  380 ctaagggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatg 452  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| ||||||||||    
T  6911569 ctaagggtgtgtttgtttcaagttataattgttgattctcgggaataaaatgataagaatgtatatgcctatg 6911497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 383 - 452
Target Start/End: Complemental strand, 2430569 - 2430500
Alignment:
Q  383 agggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatg 452  Q
    ||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||||||    
T  2430569 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatatgcctatg 2430500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 383 - 452
Target Start/End: Original strand, 49822916 - 49822985
Alignment:
Q  383 agggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatg 452  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||| ||||||||||    
T  49822916 agggtgtgtttgtttcaagttataattgttgattctcgggaataaaatgatagaaatgtatatgcctatg 49822985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 381 - 452
Target Start/End: Complemental strand, 2632927 - 2632856
Alignment:
Q  381 taagggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatg 452  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||||||| |||||||||| ||||||||||    
T  2632927 taagggtgtgtttgtttcaagttataattgttgattcccgggaataaaataataggaatgtatatgcctatg 2632856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 378 - 449
Target Start/End: Original strand, 5806285 - 5806356
Alignment:
Q  378 aactaagggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcct 449  Q
    |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| ||||| |||||||    
T  5806285 aactaagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatgtatatgcct 5806356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 381 - 452
Target Start/End: Complemental strand, 46666783 - 46666712
Alignment:
Q  381 taagggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatg 452  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||||||||||| ||||||| ||||||||||    
T  46666783 taagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 46666712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 382 - 452
Target Start/End: Original strand, 12190175 - 12190245
Alignment:
Q  382 aagggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatg 452  Q
    |||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||  |||||||||    
T  12190175 aagggtgtgtttgtttcaagttataattgttgattttcgggaataaaatgataggaatgtacatgcctatg 12190245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 383 - 452
Target Start/End: Original strand, 1597341 - 1597410
Alignment:
Q  383 agggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatg 452  Q
    ||||||||||||||||||||||||||| ||||||  ||||||||||||||||||||||| ||||||||||    
T  1597341 agggtgtgtttgtttcaagttataattgttgatttccgggaataaaatgataggaatgtatatgcctatg 1597410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 383 - 452
Target Start/End: Complemental strand, 6978843 - 6978774
Alignment:
Q  383 agggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatg 452  Q
    ||||||||||||||||||||||||||| ||||||| ||||||||||||||||| ||||| ||||||||||    
T  6978843 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatgtatatgcctatg 6978774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 383 - 452
Target Start/End: Complemental strand, 9115910 - 9115841
Alignment:
Q  383 agggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatg 452  Q
    ||||||||||||||||||||||||||| ||||||| ||||||||||||||||| ||||| ||||||||||    
T  9115910 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatgtatatgcctatg 9115841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 387 - 452
Target Start/End: Complemental strand, 36361851 - 36361786
Alignment:
Q  387 tgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatg 452  Q
    ||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||||||    
T  36361851 tgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatatgcctatg 36361786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 384 - 452
Target Start/End: Complemental strand, 14788795 - 14788727
Alignment:
Q  384 gggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatg 452  Q
    |||||||||||||||||||||||||||||||||| |||||||||||| |||||||||| |||| |||||    
T  14788795 gggtgtgtttgtttcaagttataatttttgattcccgggaataaaataataggaatgtatatgtctatg 14788727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 384 - 452
Target Start/End: Complemental strand, 39930529 - 39930461
Alignment:
Q  384 gggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatg 452  Q
    |||||||||||||||||||||||||| ||||||| ||||||||||||||||| ||||| ||||||||||    
T  39930529 gggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatgtatatgcctatg 39930461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 385 - 452
Target Start/End: Complemental strand, 25789834 - 25789767
Alignment:
Q  385 ggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatg 452  Q
    ||||||||||||||||||||||||| ||||||| ||||||||||||||||| ||||| ||||||||||    
T  25789834 ggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatgtatatgcctatg 25789767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 381 - 452
Target Start/End: Complemental strand, 47037532 - 47037461
Alignment:
Q  381 taagggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatg 452  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| ||| | ||||||||||    
T  47037532 taagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatatatatgcctatg 47037461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 383 - 452
Target Start/End: Complemental strand, 8332087 - 8332018
Alignment:
Q  383 agggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatg 452  Q
    ||||||||||||||||||||||||||| ||||||  ||||||||||||||| ||||||| ||||||||||    
T  8332087 agggtgtgtttgtttcaagttataattgttgatttccgggaataaaatgattggaatgtatatgcctatg 8332018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 383 - 452
Target Start/End: Complemental strand, 39329681 - 39329612
Alignment:
Q  383 agggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatg 452  Q
    ||||||||||||||||||||||||||| ||||||| ||||||||||||||| ||||||| |||| |||||    
T  39329681 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgtctatg 39329612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 383 - 452
Target Start/End: Complemental strand, 52630846 - 52630777
Alignment:
Q  383 agggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatg 452  Q
    ||||||||||||||||||||||||||| |||||||  |||||||||||||||||||||| |||| |||||    
T  52630846 agggtgtgtttgtttcaagttataattgttgattcctgggaataaaatgataggaatgtatatgtctatg 52630777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 384 - 452
Target Start/End: Original strand, 20260086 - 20260154
Alignment:
Q  384 gggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatg 452  Q
    |||||||||||||||||||||||||| |||||||  |||||||||||||| ||||||| ||||||||||    
T  20260086 gggtgtgtttgtttcaagttataattgttgattcctgggaataaaatgattggaatgtatatgcctatg 20260154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 381 - 452
Target Start/End: Original strand, 9831867 - 9831938
Alignment:
Q  381 taagggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatg 452  Q
    |||| |||||||||||||||||||||||| ||||||| | ||||||||||||||| ||||| ||||||||||    
T  9831867 taagtgtgtgtttgtttcaagttataattgttgattcccaggaataaaatgatagaaatgtatatgcctatg 9831938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 382 - 452
Target Start/End: Original strand, 38964677 - 38964747
Alignment:
Q  382 aagggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatg 452  Q
    ||||| |||||||||||||||||||||| ||||||| ||||||||||||||||| ||||| ||||| ||||    
T  38964677 aagggggtgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatgtatatgcttatg 38964747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 379 - 452
Target Start/End: Original strand, 5518499 - 5518572
Alignment:
Q  379 actaagggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatg 452  Q
    |||||||||||||||||||||||||||| || ||||||| | ||||||||||||||| ||| | ||||||||||    
T  5518499 actaagggtgtgtttgtttcaagttatatttgttgattcccaggaataaaatgatagaaatatatatgcctatg 5518572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 382 - 446
Target Start/End: Complemental strand, 35187530 - 35187466
Alignment:
Q  382 aagggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatg 446  Q
    |||||||||||| ||||||||||||||| ||||||| ||||||||||||||||| ||||| ||||    
T  35187530 aagggtgtgtttttttcaagttataattgttgattcccgggaataaaatgatagaaatgtatatg 35187466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 381 - 452
Target Start/End: Original strand, 4683371 - 4683442
Alignment:
Q  381 taagggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatg 452  Q
    ||||||||| |||||||||| |||||||| ||||||| | | ||||||||||||||||||| ||||||||||    
T  4683371 taagggtgtctttgtttcaatttataattgttgattcccagaaataaaatgataggaatgtatatgcctatg 4683442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 380 - 447
Target Start/End: Original strand, 32202327 - 32202394
Alignment:
Q  380 ctaagggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgc 447  Q
    |||||||||||||||||||||||||||||| ||||||| ||  ||||||||||||| ||||| |||||    
T  32202327 ctaagggtgtgtttgtttcaagttataattgttgattcccgaaaataaaatgatagaaatgtatatgc 32202394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 386 - 452
Target Start/End: Complemental strand, 32824992 - 32824926
Alignment:
Q  386 gtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatg 452  Q
    |||||||||||||||||||||||| ||||||  ||| |||||||| |||||||||| ||||||||||    
T  32824992 gtgtgtttgtttcaagttataattgttgatttccggaaataaaataataggaatgtatatgcctatg 32824926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 387 - 452
Target Start/End: Original strand, 51445083 - 51445148
Alignment:
Q  387 tgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatg 452  Q
    ||||||||||||||||||||||| ||||||| ||||||||||||||||  ||||| ||| ||||||    
T  51445083 tgtgtttgtttcaagttataattgttgattcccgggaataaaatgatataaatgtatatacctatg 51445148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 381 - 452
Target Start/End: Original strand, 48916019 - 48916090
Alignment:
Q  381 taagggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatg 452  Q
    ||||||||||||| |||||||||||| || |||||||  | |||||||||||||| ||||| ||||||||||    
T  48916019 taagggtgtgtttatttcaagttatatttgttgattccagagaataaaatgatagaaatgtatatgcctatg 48916090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 384 - 439
Target Start/End: Complemental strand, 1007819 - 1007764
Alignment:
Q  384 gggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaat 439  Q
    ||||||||||||||||||||||| || ||||||| || ||||||||||||| ||||    
T  1007819 gggtgtgtttgtttcaagttatatttgttgattcccgagaataaaatgatatgaat 1007764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 381 - 450
Target Start/End: Original strand, 50190762 - 50190831
Alignment:
Q  381 taagggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgccta 450  Q
    |||| |||||||||||||||| ||||||| || |||  ||| ||||||||| ||||||||| ||||||||    
T  50190762 taagagtgtgtttgtttcaagatataattgttaatttccggaaataaaatgctaggaatgtatatgccta 50190831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 393 - 452
Target Start/End: Original strand, 37436630 - 37436689
Alignment:
Q  393 tgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatg 452  Q
    ||||||| |||||| || ||||||| || |||||||||||||||||||| ||||| ||||    
T  37436630 tgtttcatgttatatttgttgattcacgagaataaaatgataggaatgtatatgcatatg 37436689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 390 - 452
Target Start/End: Complemental strand, 30241075 - 30241013
Alignment:
Q  390 gtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatg 452  Q
    ||||||||||||||||| || |||||| | || ||||||||||||| ||| | ||||||||||    
T  30241075 gtttgtttcaagttatatttgttgatttttggtaataaaatgatagaaatatatatgcctatg 30241013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 381 - 434
Target Start/End: Complemental strand, 29091741 - 29091688
Alignment:
Q  381 taagggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgata 434  Q
    |||||||||||||||||||||||||| || |||||||  |  ||||||||||||    
T  29091741 taagggtgtgtttgtttcaagttatatttgttgattcctgataataaaatgata 29091688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 383 - 439
Target Start/End: Original strand, 52699465 - 52699521
Alignment:
Q  383 agggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaat 439  Q
    |||||| ||||||||||||||||| |  | |||||  ||||||||||||||||||||    
T  52699465 agggtgcgtttgtttcaagttatattcgtagattcctgggaataaaatgataggaat 52699521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 64; Significance: 8e-28; HSPs: 22)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 377 - 452
Target Start/End: Complemental strand, 24574653 - 24574578
Alignment:
Q  377 aaactaagggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatg 452  Q
    ||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||||||    
T  24574653 aaactaagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatatgcctatg 24574578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 384 - 452
Target Start/End: Original strand, 28124436 - 28124504
Alignment:
Q  384 gggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatg 452  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||    
T  28124436 gggtgtgtttgtttcaagttataattgttgattctcgggaataaaatgataggaatgtatatgcctatg 28124504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 381 - 452
Target Start/End: Complemental strand, 26849096 - 26849025
Alignment:
Q  381 taagggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatg 452  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||||||    
T  26849096 taagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatatgcctatg 26849025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 383 - 452
Target Start/End: Complemental strand, 40908337 - 40908268
Alignment:
Q  383 agggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatg 452  Q
    ||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||||||    
T  40908337 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatatgcctatg 40908268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 379 - 452
Target Start/End: Original strand, 6231496 - 6231569
Alignment:
Q  379 actaagggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatg 452  Q
    |||| |||||||||||||||||||||||||| ||||||| || |||||||||||||||||||| ||||||||||    
T  6231496 actaggggtgtgtttgtttcaagttataattgttgattcccgagaataaaatgataggaatgtatatgcctatg 6231569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 380 - 449
Target Start/End: Original strand, 8476304 - 8476373
Alignment:
Q  380 ctaagggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcct 449  Q
    |||||||||||||||||||||||||||||| ||||||| ||||||||||||||| ||||||| |||||||    
T  8476304 ctaagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcct 8476373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 383 - 452
Target Start/End: Original strand, 11239119 - 11239188
Alignment:
Q  383 agggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatg 452  Q
    ||||||||||||||||||||||||||| ||||||| ||||||||||||||||| ||||| ||||||||||    
T  11239119 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatgtatatgcctatg 11239188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 383 - 452
Target Start/End: Complemental strand, 44952380 - 44952311
Alignment:
Q  383 agggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatg 452  Q
    ||||||||||||||||||||||||||| ||||||| ||||||||||||||||| ||||| ||||||||||    
T  44952380 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatgtatatgcctatg 44952311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 384 - 441
Target Start/End: Original strand, 9320448 - 9320505
Alignment:
Q  384 gggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgt 441  Q
    |||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||    
T  9320448 gggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgt 9320505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 383 - 452
Target Start/End: Complemental strand, 20297865 - 20297796
Alignment:
Q  383 agggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatg 452  Q
    ||||||||||||||||||||||||||| ||||||| ||| ||||||||||||| ||||| ||||||||||    
T  20297865 agggtgtgtttgtttcaagttataattgttgattcccggaaataaaatgatagaaatgtatatgcctatg 20297796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 380 - 452
Target Start/End: Original strand, 20414461 - 20414533
Alignment:
Q  380 ctaagggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatg 452  Q
    |||||||||||||||||||||||||||||| ||||||   |||||||||||||| ||||||| ||||||||||    
T  20414461 ctaagggtgtgtttgtttcaagttataattgttgatttctgggaataaaatgattggaatgtatatgcctatg 20414533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 388 - 452
Target Start/End: Original strand, 33217917 - 33217981
Alignment:
Q  388 gtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatg 452  Q
    |||||||||||||||||||||| ||||||  ||||||||||||||||||||||| ||||||||||    
T  33217917 gtgtttgtttcaagttataattgttgatttccgggaataaaatgataggaatgtatatgcctatg 33217981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 384 - 452
Target Start/End: Original strand, 47114857 - 47114925
Alignment:
Q  384 gggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatg 452  Q
    |||||||||||||||||||||||||| |||||||  |||||||||||||| ||||||| ||||||||||    
T  47114857 gggtgtgtttgtttcaagttataattgttgattcctgggaataaaatgattggaatgtatatgcctatg 47114925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 383 - 452
Target Start/End: Original strand, 43132156 - 43132225
Alignment:
Q  383 agggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatg 452  Q
    |||||||||||||||||||||||| || |||||||||| ||||||||| |||||||| | ||||||||||    
T  43132156 agggtgtgtttgtttcaagttatatttgttgattctcgagaataaaataataggaatatatatgcctatg 43132225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 386 - 452
Target Start/End: Complemental strand, 1099267 - 1099201
Alignment:
Q  386 gtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatg 452  Q
    |||||||||||| ||||||||||| ||||||| ||||||||||||||||| ||||| ||| ||||||    
T  1099267 gtgtgtttgttttaagttataattgttgattcccgggaataaaatgatagaaatgtatatccctatg 1099201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 383 - 452
Target Start/End: Original strand, 31435922 - 31435991
Alignment:
Q  383 agggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatg 452  Q
    |||||||||||||||||||||||| || |||||||  | |||||||||||||| ||||| ||||||||||    
T  31435922 agggtgtgtttgtttcaagttatatttgttgattcctgagaataaaatgatagaaatgtatatgcctatg 31435991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 387 - 452
Target Start/End: Original strand, 48339760 - 48339825
Alignment:
Q  387 tgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatg 452  Q
    ||||||||||||||||||||||| ||||||  ||||||||||||||||  ||||| ||||||||||    
T  48339760 tgtgtttgtttcaagttataattgttgatttccgggaataaaatgatataaatgtatatgcctatg 48339825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 383 - 446
Target Start/End: Original strand, 43715307 - 43715370
Alignment:
Q  383 agggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatg 446  Q
    ||||||||||||||||||||||||||| ||||||| ||  ||||||||||||| ||||| ||||    
T  43715307 agggtgtgtttgtttcaagttataattgttgattcccgaaaataaaatgatagaaatgtatatg 43715370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 381 - 430
Target Start/End: Complemental strand, 29512753 - 29512704
Alignment:
Q  381 taagggtgtgtttgtttcaagttataatttttgattctcgggaataaaat 430  Q
    |||||||||||||||||||||||||||||||| |||   |||||||||||    
T  29512753 taagggtgtgtttgtttcaagttataatttttaatttctgggaataaaat 29512704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 411 - 450
Target Start/End: Original strand, 9320407 - 9320446
Alignment:
Q  411 ttgattctcgggaataaaatgataggaatgtttatgccta 450  Q
    ||||||||||||||||||||||||||||||| ||| ||||    
T  9320407 ttgattctcgggaataaaatgataggaatgtatataccta 9320446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 403 - 452
Target Start/End: Original strand, 31611004 - 31611053
Alignment:
Q  403 tataatttttgattctcgggaataaaatgataggaatgtttatgcctatg 452  Q
    ||||||| ||||||| ||||||||||||||| ||||||| |||| |||||    
T  31611004 tataattgttgattcccgggaataaaatgattggaatgtatatgtctatg 31611053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 382 - 435
Target Start/End: Complemental strand, 45826849 - 45826796
Alignment:
Q  382 aagggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgatag 435  Q
    ||||||||||||||||||||||||  || | |||||  ||||||||||||||||    
T  45826849 aagggtgtgtttgtttcaagttatcgttgtagattccagggaataaaatgatag 45826796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 61; Significance: 5e-26; HSPs: 19)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 380 - 452
Target Start/End: Original strand, 4765556 - 4765628
Alignment:
Q  380 ctaagggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatg 452  Q
    |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||||||    
T  4765556 ctaagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatatgcctatg 4765628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 381 - 452
Target Start/End: Original strand, 12970527 - 12970598
Alignment:
Q  381 taagggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatg 452  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||||||    
T  12970527 taagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatatgcctatg 12970598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 383 - 452
Target Start/End: Original strand, 19065504 - 19065573
Alignment:
Q  383 agggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatg 452  Q
    ||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||||||    
T  19065504 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatatgcctatg 19065573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 380 - 452
Target Start/End: Complemental strand, 18412284 - 18412212
Alignment:
Q  380 ctaagggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatg 452  Q
    |||||||||||||||||||||||||||||| |||||||  |||||||||||||||||||||| ||||||||||    
T  18412284 ctaagggtgtgtttgtttcaagttataattattgattcctgggaataaaatgataggaatgtatatgcctatg 18412212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 382 - 452
Target Start/End: Complemental strand, 27481430 - 27481360
Alignment:
Q  382 aagggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatg 452  Q
    ||||||||||||||||||||||||||||||||||| | || ||||||||||||||||||| ||||||||||    
T  27481430 aagggtgtgtttgtttcaagttataatttttgatttttggaaataaaatgataggaatgtatatgcctatg 27481360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 383 - 452
Target Start/End: Original strand, 22935911 - 22935980
Alignment:
Q  383 agggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatg 452  Q
    ||||||||||||||||||||||||||| ||||||| ||||||||||||||| ||||||| ||||||||||    
T  22935911 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 22935980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 383 - 452
Target Start/End: Complemental strand, 28602627 - 28602558
Alignment:
Q  383 agggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatg 452  Q
    ||||||||||||||||||||||||||| ||||||| ||||||||||||||| ||||||| ||||||||||    
T  28602627 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 28602558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 381 - 452
Target Start/End: Original strand, 555703 - 555774
Alignment:
Q  381 taagggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatg 452  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| ||||| |||| |||||    
T  555703 taagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatgtatatgtctatg 555774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 381 - 452
Target Start/End: Original strand, 14206818 - 14206889
Alignment:
Q  381 taagggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatg 452  Q
    ||||||||||||||||||||||||||||| ||||||  ||||||||||||||||| ||||| ||||||||||    
T  14206818 taagggtgtgtttgtttcaagttataattgttgatttccgggaataaaatgatagaaatgtatatgcctatg 14206889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 380 - 452
Target Start/End: Original strand, 29543011 - 29543083
Alignment:
Q  380 ctaagggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatg 452  Q
    |||||||||||||||||||||||||||||| |||||||  |||||||||||||| ||||||| |||| |||||    
T  29543011 ctaagggtgtgtttgtttcaagttataattgttgattcctgggaataaaatgattggaatgtatatgtctatg 29543083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 384 - 452
Target Start/End: Complemental strand, 36703945 - 36703877
Alignment:
Q  384 gggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatg 452  Q
    |||||||||||||||||||||||||| |||||| |||||||||||||||||| ||||| |||| |||||    
T  36703945 gggtgtgtttgtttcaagttataattgttgattatcgggaataaaatgatagaaatgtatatgtctatg 36703877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 387 - 452
Target Start/End: Original strand, 11855658 - 11855723
Alignment:
Q  387 tgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatg 452  Q
    ||||||||||||||||||||||| |||||||  | |||||||||||||||||||| ||||||||||    
T  11855658 tgtgtttgtttcaagttataattgttgattcctgagaataaaatgataggaatgtatatgcctatg 11855723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 388 - 452
Target Start/End: Complemental strand, 6091782 - 6091718
Alignment:
Q  388 gtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatg 452  Q
    |||||||||||||||||||||| ||||||| ||||||||||||||||  ||||| ||||||||||    
T  6091782 gtgtttgtttcaagttataattgttgattcccgggaataaaatgatataaatgtatatgcctatg 6091718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 390 - 451
Target Start/End: Complemental strand, 8406959 - 8406898
Alignment:
Q  390 gtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctat 451  Q
    |||||||||||||||||||| |||||| ||| ||||||||||||||||||||  ||||||||    
T  8406959 gtttgtttcaagttataattgttgattttcgagaataaaatgataggaatgtacatgcctat 8406898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 386 - 446
Target Start/End: Complemental strand, 32536006 - 32535946
Alignment:
Q  386 gtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatg 446  Q
    |||||||||||| ||||||||||| ||||||| | ||||||||||||||| ||||| ||||    
T  32536006 gtgtgtttgttttaagttataattgttgattcccaggaataaaatgatagaaatgtatatg 32535946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 383 - 435
Target Start/End: Original strand, 42012178 - 42012230
Alignment:
Q  383 agggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgatag 435  Q
    ||||||||||||||| ||| |||| || |||||||||||||||||||||||||    
T  42012178 agggtgtgtttgtttgaagctatatttgttgattctcgggaataaaatgatag 42012230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 386 - 439
Target Start/End: Complemental strand, 20962659 - 20962606
Alignment:
Q  386 gtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaat 439  Q
    ||||||||||||||||||||| |  | |||||| ||||||||||||||||||||    
T  20962659 gtgtgtttgtttcaagttatattcgtagattcttgggaataaaatgataggaat 20962606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 405 - 452
Target Start/End: Original strand, 8646412 - 8646459
Alignment:
Q  405 taatttttgattctcgggaataaaatgataggaatgtttatgcctatg 452  Q
    ||||| ||||||| ||||||||||||||||||||||| |||| |||||    
T  8646412 taattgttgattcccgggaataaaatgataggaatgtatatgtctatg 8646459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 386 - 435
Target Start/End: Original strand, 26637045 - 26637094
Alignment:
Q  386 gtgtgtttgtttcaagttataatttttgattctcgggaataaaatgatag 435  Q
    ||||||||||||||||||||| || ||||||   ||||||||||||||||    
T  26637045 gtgtgtttgtttcaagttatatttgttgattaatgggaataaaatgatag 26637094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 61; Significance: 5e-26; HSPs: 34)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 380 - 452
Target Start/End: Complemental strand, 35999765 - 35999693
Alignment:
Q  380 ctaagggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatg 452  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||| ||||||||||    
T  35999765 ctaagggtgtgtttgtttcaagttataattgttgattctcgggaataaaatgatagaaatgtatatgcctatg 35999693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 384 - 452
Target Start/End: Original strand, 48518891 - 48518959
Alignment:
Q  384 gggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatg 452  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||    
T  48518891 gggtgtgtttgtttcaagttataatttttgattcccgggaataaaatgataggaatgtatatgcctatg 48518959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 383 - 452
Target Start/End: Complemental strand, 27555486 - 27555417
Alignment:
Q  383 agggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatg 452  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||| |||||    
T  27555486 agggtgtgtttgtttcaagttataattgttgattctcgggaataaaatgataggaatgtatatgtctatg 27555417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 383 - 452
Target Start/End: Original strand, 39730292 - 39730361
Alignment:
Q  383 agggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatg 452  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||| |||||    
T  39730292 agggtgtgtttgtttcaagttataatttttgattcccgggaataaaatgataggaatgtatatgtctatg 39730361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 383 - 452
Target Start/End: Original strand, 45747795 - 45747864
Alignment:
Q  383 agggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatg 452  Q
    ||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||||||    
T  45747795 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatatgcctatg 45747864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 381 - 441
Target Start/End: Original strand, 25916032 - 25916092
Alignment:
Q  381 taagggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgt 441  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  25916032 taagggtgtgtttgtttcaagttataatttttgattcccgggaataaaatgataggaatgt 25916092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 380 - 452
Target Start/End: Complemental strand, 40435979 - 40435907
Alignment:
Q  380 ctaagggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatg 452  Q
    |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| ||||| ||||||||||    
T  40435979 ctaagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatgtatatgcctatg 40435907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 381 - 452
Target Start/End: Complemental strand, 48879403 - 48879332
Alignment:
Q  381 taagggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatg 452  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| ||||| ||||||||||    
T  48879403 taagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatgtatatgcctatg 48879332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 378 - 452
Target Start/End: Original strand, 27762893 - 27762967
Alignment:
Q  378 aactaagggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatg 452  Q
    ||||| |||||||||||||||||||||||||| ||||||| ||||||||||||||| ||||||| ||||||||||    
T  27762893 aactatgggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 27762967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 384 - 452
Target Start/End: Original strand, 13229989 - 13230057
Alignment:
Q  384 gggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatg 452  Q
    ||||||||||||||||||||||||||||| |||| ||||||||||||||||| ||||| ||||||||||    
T  13229989 gggtgtgtttgtttcaagttataattttttattcccgggaataaaatgatagaaatgtatatgcctatg 13230057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 381 - 452
Target Start/End: Original strand, 6279918 - 6279989
Alignment:
Q  381 taagggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatg 452  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||||||||||| |||||| |||| |||||    
T  6279918 taagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatatgaatgtatatgtctatg 6279989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 381 - 452
Target Start/End: Complemental strand, 23686865 - 23686794
Alignment:
Q  381 taagggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatg 452  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| ||| | ||||||||||    
T  23686865 taagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatatatatgcctatg 23686794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 383 - 452
Target Start/End: Original strand, 41859046 - 41859115
Alignment:
Q  383 agggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatg 452  Q
    ||||||||||||||||||||||||||| ||||||  ||||||||||||||| ||||||| ||||||||||    
T  41859046 agggtgtgtttgtttcaagttataattgttgatttccgggaataaaatgattggaatgtatatgcctatg 41859115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 383 - 452
Target Start/End: Complemental strand, 45596344 - 45596275
Alignment:
Q  383 agggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatg 452  Q
    |||||| |||||||||||||||||||| |||||| |||||||||||||||||| ||||| ||||||||||    
T  45596344 agggtgcgtttgtttcaagttataattgttgattttcgggaataaaatgatagaaatgtatatgcctatg 45596275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 384 - 452
Target Start/End: Original strand, 34049597 - 34049665
Alignment:
Q  384 gggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatg 452  Q
    |||||||||||||||||||||||||| ||||||| ||| ||||||||||||||||||| |||| |||||    
T  34049597 gggtgtgtttgtttcaagttataattgttgattcccggaaataaaatgataggaatgtatatgtctatg 34049665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 381 - 452
Target Start/End: Original strand, 39835304 - 39835375
Alignment:
Q  381 taagggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatg 452  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||||||||||||  ||||| ||||| ||||    
T  39835304 taagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatataaatgtatatgcatatg 39835375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 383 - 446
Target Start/End: Original strand, 55967999 - 55968062
Alignment:
Q  383 agggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatg 446  Q
    ||||||||||||||||||||||||||| ||||||| ||||||||||||||| ||||||| ||||    
T  55967999 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatg 55968062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 383 - 452
Target Start/End: Original strand, 18405233 - 18405302
Alignment:
Q  383 agggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatg 452  Q
    ||||||||||||||||||||||||||| ||||||| || ||||||||| |||| ||||| ||||||||||    
T  18405233 agggtgtgtttgtttcaagttataattgttgattcccgagaataaaattatagaaatgtatatgcctatg 18405302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 383 - 452
Target Start/End: Complemental strand, 25932517 - 25932448
Alignment:
Q  383 agggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatg 452  Q
    ||||||||||||||||||||||||||| |||||||   ||||||||||||||| ||||| ||||||||||    
T  25932517 agggtgtgtttgtttcaagttataattgttgattcctaggaataaaatgatagaaatgtatatgcctatg 25932448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 383 - 452
Target Start/End: Complemental strand, 42774024 - 42773955
Alignment:
Q  383 agggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatg 452  Q
    ||||||||||||||||||||||||||| ||||||   |||||||||||||| ||||||| ||||||||||    
T  42774024 agggtgtgtttgtttcaagttataattgttgatttctgggaataaaatgattggaatgtatatgcctatg 42773955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 383 - 452
Target Start/End: Complemental strand, 43723340 - 43723271
Alignment:
Q  383 agggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatg 452  Q
    ||||||||||||||||||||||||||| ||||||| ||  ||||||||||||| ||||| ||||||||||    
T  43723340 agggtgtgtttgtttcaagttataattgttgattcccgaaaataaaatgatagaaatgtatatgcctatg 43723271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 388 - 452
Target Start/End: Complemental strand, 27942814 - 27942750
Alignment:
Q  388 gtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatg 452  Q
    |||||||||||||||||||||| ||||||| ||| ||||||||||||||||||| |||| |||||    
T  27942814 gtgtttgtttcaagttataattgttgattcccggaaataaaatgataggaatgtatatgtctatg 27942750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 380 - 452
Target Start/End: Original strand, 41744216 - 41744288
Alignment:
Q  380 ctaagggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatg 452  Q
    ||||| |||||||| ||||||||||||||| ||||||  ||||||||||||||||| ||||| ||||||||||    
T  41744216 ctaagagtgtgtttatttcaagttataattgttgatttccgggaataaaatgatagaaatgtatatgcctatg 41744288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 384 - 451
Target Start/End: Complemental strand, 32953598 - 32953531
Alignment:
Q  384 gggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctat 451  Q
    |||||||||||| ||||||||||||| ||||||| | |||| |||||||||||||||| |||||||||    
T  32953598 gggtgtgtttgtctcaagttataattgttgattcccaggaacaaaatgataggaatgtatatgcctat 32953531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 383 - 446
Target Start/End: Complemental strand, 39498901 - 39498838
Alignment:
Q  383 agggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatg 446  Q
    ||||||||||||||||||||||||||| ||||||| ||| ||||||||||||| ||||| ||||    
T  39498901 agggtgtgtttgtttcaagttataattgttgattcccggaaataaaatgatagaaatgtatatg 39498838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 383 - 446
Target Start/End: Complemental strand, 39502240 - 39502177
Alignment:
Q  383 agggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatg 446  Q
    ||||||||||||||||||||||||||| ||||||| ||| ||||||||||||| ||||| ||||    
T  39502240 agggtgtgtttgtttcaagttataattgttgattcccggaaataaaatgatagaaatgtatatg 39502177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 385 - 452
Target Start/End: Complemental strand, 47670436 - 47670369
Alignment:
Q  385 ggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatg 452  Q
    ||||||||||||||||||||||||| |||||||  || ||||||||||||| ||||| ||||||||||    
T  47670436 ggtgtgtttgtttcaagttataattgttgattcctggaaataaaatgatagaaatgtatatgcctatg 47670369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 386 - 452
Target Start/End: Complemental strand, 18931826 - 18931760
Alignment:
Q  386 gtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatg 452  Q
    |||||||||||||||||||||||| ||||||   |||||||||||||||||||||| |||| |||||    
T  18931826 gtgtgtttgtttcaagttataattgttgatttctgggaataaaatgataggaatgtatatgtctatg 18931760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 377 - 439
Target Start/End: Complemental strand, 30415984 - 30415922
Alignment:
Q  377 aaactaagggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaat 439  Q
    |||||||||||||||||||||||||||||| || ||||||| ||  |||||||||||||||||    
T  30415984 aaactaagggtgtgtttgtttcaagttatatttgttgattcccgataataaaatgataggaat 30415922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 383 - 452
Target Start/End: Complemental strand, 936202 - 936133
Alignment:
Q  383 agggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatg 452  Q
    ||||||||||||||||||||||||||| ||||||| || |||||||||||| ||||| | ||| ||||||    
T  936202 agggtgtgtttgtttcaagttataattgttgattcccgagaataaaatgattggaatatatatccctatg 936133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 388 - 441
Target Start/End: Original strand, 34237424 - 34237477
Alignment:
Q  388 gtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgt 441  Q
    |||||||||||||||||||||| ||||||| ||||||||||||||||| |||||    
T  34237424 gtgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatgt 34237477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 379 - 452
Target Start/End: Original strand, 50672903 - 50672973
Alignment:
Q  379 actaagggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatg 452  Q
    ||||||||||||||||||| ||||||  ||| ||||||| ||||||||||||||||||||||| |||| |||||    
T  50672903 actaagggtgtgtttgttttaagtta--attgttgattc-cgggaataaaatgataggaatgtatatgtctatg 50672973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 389 - 452
Target Start/End: Original strand, 10400810 - 10400873
Alignment:
Q  389 tgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatg 452  Q
    |||||||||||||||||| || |||||| | |||||||||||||||| ||||| |||| |||||    
T  10400810 tgtttgtttcaagttatatttgttgatttttgggaataaaatgatagaaatgtatatgtctatg 10400873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 396 - 452
Target Start/End: Complemental strand, 8322308 - 8322252
Alignment:
Q  396 ttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatg 452  Q
    |||||||||||||| |||||||  |||||||||||||||| ||||| |||| |||||    
T  8322308 ttcaagttataattgttgattcctgggaataaaatgatagaaatgtatatgtctatg 8322252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 377 - 452
Target Start/End: Complemental strand, 202003 - 201928
Alignment:
Q  377 aaactaagggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatg 452  Q
    ||||| ||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||||||    
T  202003 aaacttagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatatgcctatg 201928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 60; Significance: 2e-25; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 381 - 452
Target Start/End: Original strand, 7053567 - 7053638
Alignment:
Q  381 taagggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatg 452  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||||||    
T  7053567 taagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatatgcctatg 7053638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 383 - 452
Target Start/End: Complemental strand, 14171085 - 14171016
Alignment:
Q  383 agggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatg 452  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| | ||||||||||    
T  14171085 agggtgtgtttgtttcaagttataatttttgattcccgggaataaaatgataggaatctatatgcctatg 14171016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 381 - 452
Target Start/End: Complemental strand, 2657774 - 2657703
Alignment:
Q  381 taagggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatg 452  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| ||| ||||||    
T  2657774 taagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatatacctatg 2657703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 381 - 452
Target Start/End: Complemental strand, 8029407 - 8029336
Alignment:
Q  381 taagggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatg 452  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| ||||| ||||||||||    
T  8029407 taagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatgtatatgcctatg 8029336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 384 - 452
Target Start/End: Complemental strand, 1317089 - 1317021
Alignment:
Q  384 gggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatg 452  Q
    |||||||||||||||||||||||||| ||||||| ||||||||||||||| ||||||| ||||||||||    
T  1317089 gggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 1317021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 387 - 452
Target Start/End: Complemental strand, 18897989 - 18897924
Alignment:
Q  387 tgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatg 452  Q
    ||||||||||||||||||||||| ||||||| ||| |||||| |||||| ||||| ||||||||||    
T  18897989 tgtgtttgtttcaagttataattgttgattcccggaaataaagtgatagaaatgtatatgcctatg 18897924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 379 - 451
Target Start/End: Original strand, 7344078 - 7344150
Alignment:
Q  379 actaagggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctat 451  Q
    |||||||||||||| ||||||| |||||||| |  |||  || |||||||||||||||||||| |||||||||    
T  7344078 actaagggtgtgttcgtttcaaattataattgtaaatttccgagaataaaatgataggaatgtatatgcctat 7344150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 391 - 452
Target Start/End: Complemental strand, 16968989 - 16968928
Alignment:
Q  391 tttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatg 452  Q
    ||||||||||||||||||| |||||||  | |||||||||||||||||| | |||| |||||    
T  16968989 tttgtttcaagttataattgttgattcctgagaataaaatgataggaatctatatgtctatg 16968928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 378 - 435
Target Start/End: Complemental strand, 3869582 - 3869525
Alignment:
Q  378 aactaagggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgatag 435  Q
    ||||||||||||||||||||||||||||  || | ||||   ||||||||||||||||    
T  3869582 aactaagggtgtgtttgtttcaagttatttttgtagatttctgggaataaaatgatag 3869525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 383 - 452
Target Start/End: Original strand, 6705764 - 6705833
Alignment:
Q  383 agggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatg 452  Q
    |||||||||||||||||||||||| || |||||||   ||||||||||| ||| ||| | |||| |||||    
T  6705764 agggtgtgtttgtttcaagttatatttgttgattcattggaataaaatggtagaaatatatatgtctatg 6705833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 384 - 417
Target Start/End: Original strand, 10246222 - 10246255
Alignment:
Q  384 gggtgtgtttgtttcaagttataatttttgattc 417  Q
    |||||||||||||||||||||||||| |||||||    
T  10246222 gggtgtgtttgtttcaagttataattgttgattc 10246255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 60; Significance: 2e-25; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 381 - 452
Target Start/End: Original strand, 346342 - 346413
Alignment:
Q  381 taagggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatg 452  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||||||    
T  346342 taagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatatgcctatg 346413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 381 - 452
Target Start/End: Original strand, 39995128 - 39995199
Alignment:
Q  381 taagggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatg 452  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||||||    
T  39995128 taagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatatgcctatg 39995199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 381 - 452
Target Start/End: Complemental strand, 6171865 - 6171794
Alignment:
Q  381 taagggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatg 452  Q
    ||||||||||||||||||||||||||||| ||||||| || |||||||||||||||||||| ||||||||||    
T  6171865 taagggtgtgtttgtttcaagttataattgttgattcccgagaataaaatgataggaatgtatatgcctatg 6171794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 381 - 452
Target Start/End: Complemental strand, 11071679 - 11071608
Alignment:
Q  381 taagggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatg 452  Q
    ||||||||||||||||||||||||||||| ||||||  ||||||||||||||||||||||| ||||||||||    
T  11071679 taagggtgtgtttgtttcaagttataattgttgatttccgggaataaaatgataggaatgtatatgcctatg 11071608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 377 - 452
Target Start/End: Complemental strand, 37534030 - 37533955
Alignment:
Q  377 aaactaagggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatg 452  Q
    ||||||||||||||||||||||||||||||||| ||||||  ||||||||||||||||||||||| |||| |||||    
T  37534030 aaactaagggtgtgtttgtttcaagttataattgttgatttccgggaataaaatgataggaatgtatatgtctatg 37533955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 378 - 452
Target Start/End: Original strand, 42674655 - 42674729
Alignment:
Q  378 aactaagggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatg 452  Q
    |||| ||||||||||||||||||||||||||| ||||||| ||||||||||||||| ||||||| ||||||||||    
T  42674655 aacttagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 42674729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 383 - 452
Target Start/End: Original strand, 21737399 - 21737468
Alignment:
Q  383 agggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatg 452  Q
    ||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| |||| |||||    
T  21737399 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatatgtctatg 21737468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 383 - 452
Target Start/End: Original strand, 41729129 - 41729198
Alignment:
Q  383 agggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatg 452  Q
    |||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||  ||||||||||    
T  41729129 agggtgtgtttgtttcaagttataattttttattcccgggaataaaatgataggaatggatatgcctatg 41729198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 384 - 452
Target Start/End: Original strand, 9733846 - 9733914
Alignment:
Q  384 gggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatg 452  Q
    |||||||||||||||||||||||||| ||||||| ||||||||||||||||| ||||| ||||||||||    
T  9733846 gggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatgtatatgcctatg 9733914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 380 - 452
Target Start/End: Original strand, 14777494 - 14777566
Alignment:
Q  380 ctaagggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatg 452  Q
    ||||||||||||||||||||| |||||||| ||||||| ||||||||||||||| ||||||| ||||||||||    
T  14777494 ctaagggtgtgtttgtttcaatttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 14777566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 382 - 452
Target Start/End: Original strand, 5770108 - 5770178
Alignment:
Q  382 aagggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatg 452  Q
    |||||| ||||||||||||||||||||| |||||||  |||||||||||||||||||||| ||||||||||    
T  5770108 aagggtatgtttgtttcaagttataattgttgattcctgggaataaaatgataggaatgtatatgcctatg 5770178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 383 - 452
Target Start/End: Original strand, 34356699 - 34356768
Alignment:
Q  383 agggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatg 452  Q
    ||||||||||||||||||||||||||| ||||||| ||||||||||||||||| ||||| |||| |||||    
T  34356699 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatgtatatgtctatg 34356768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 383 - 452
Target Start/End: Original strand, 40950858 - 40950927
Alignment:
Q  383 agggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatg 452  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||| | ||||| ||||    
T  40950858 agggtgtgtttgtttcaagttataattgttgattctcgggaataaaatgatagaaatatatatgcttatg 40950927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 381 - 452
Target Start/End: Complemental strand, 2050940 - 2050869
Alignment:
Q  381 taagggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatg 452  Q
    |||| |||||||||||||||||||||||| ||||||| || |||||||||||||||||||| ||| ||||||    
T  2050940 taagtgtgtgtttgtttcaagttataattgttgattcccgagaataaaatgataggaatgtatatacctatg 2050869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 381 - 452
Target Start/End: Complemental strand, 2521749 - 2521678
Alignment:
Q  381 taagggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatg 452  Q
    ||||||||||||||||||||||||||||| ||||||| ||  ||||||||||| ||||||| ||||||||||    
T  2521749 taagggtgtgtttgtttcaagttataattgttgattcccgaaaataaaatgattggaatgtatatgcctatg 2521678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 381 - 439
Target Start/End: Complemental strand, 13761019 - 13760961
Alignment:
Q  381 taagggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaat 439  Q
    ||||| ||||||||||||||||||||||| |||||| ||||||||||||||||||||||    
T  13761019 taaggatgtgtttgtttcaagttataattattgattttcgggaataaaatgataggaat 13760961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 386 - 452
Target Start/End: Complemental strand, 37192591 - 37192525
Alignment:
Q  386 gtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatg 452  Q
    |||||||||||||||||||||||| ||||||| ||||||||||||||||| ||||| |||| |||||    
T  37192591 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatgtatatgtctatg 37192525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 383 - 452
Target Start/End: Complemental strand, 4559631 - 4559562
Alignment:
Q  383 agggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatg 452  Q
    ||||||||||||||||||||||||||| ||||||| |  |||||||||||| ||||||| ||||||||||    
T  4559631 agggtgtgtttgtttcaagttataattgttgattcccaagaataaaatgattggaatgtatatgcctatg 4559562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 383 - 452
Target Start/End: Original strand, 20426482 - 20426551
Alignment:
Q  383 agggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatg 452  Q
    |||||||||||||||||| ||||| || ||||||| ||||||||||||||||||||| | ||||||||||    
T  20426482 agggtgtgtttgtttcaaattatatttgttgattcccgggaataaaatgataggaatttatatgcctatg 20426551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 388 - 452
Target Start/End: Original strand, 28311701 - 28311765
Alignment:
Q  388 gtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatg 452  Q
    ||||||||||||||||||| || ||||||| ||||||||||||||||||||| | ||||||||||    
T  28311701 gtgtttgtttcaagttatatttgttgattcccgggaataaaatgataggaatatatatgcctatg 28311765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 385 - 452
Target Start/End: Complemental strand, 41750599 - 41750532
Alignment:
Q  385 ggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatg 452  Q
    ||||||||||||||||||||||||| |||||||   ||||||||||||||| ||||| ||||||||||    
T  41750599 ggtgtgtttgtttcaagttataattgttgattcctaggaataaaatgatagaaatgtatatgcctatg 41750532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 381 - 452
Target Start/End: Complemental strand, 45409324 - 45409253
Alignment:
Q  381 taagggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatg 452  Q
    |||||||||||||||||||||||||| || ||||||| |  | |||||||||||||||||| ||||||||||    
T  45409324 taagggtgtgtttgtttcaagttatatttgttgattcccaagtataaaatgataggaatgtatatgcctatg 45409253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 383 - 452
Target Start/End: Complemental strand, 17966055 - 17965986
Alignment:
Q  383 agggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatg 452  Q
    ||||||||||||||||||||||||||| ||||||| ||  ||||||||||| ||||||| |||| |||||    
T  17966055 agggtgtgtttgtttcaagttataattgttgattcccgataataaaatgattggaatgtatatgtctatg 17965986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 388 - 452
Target Start/End: Complemental strand, 638660 - 638596
Alignment:
Q  388 gtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatg 452  Q
    |||||||||||||||||||||| ||||||  ||| ||||||||||||||||||| |||| |||||    
T  638660 gtgtttgtttcaagttataattgttgatttccggaaataaaatgataggaatgtatatgtctatg 638596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 388 - 452
Target Start/End: Complemental strand, 37233496 - 37233432
Alignment:
Q  388 gtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatg 452  Q
    ||||||||||||||||||| || ||||||| ||||||||||||||||||||  | ||||||||||    
T  37233496 gtgtttgtttcaagttatatttgttgattcccgggaataaaatgataggaacatatatgcctatg 37233432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 381 - 452
Target Start/End: Original strand, 27357960 - 27358031
Alignment:
Q  381 taagggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatg 452  Q
    |||||||||||||||||||||||||| || ||||||| | || ||||||||||||| |||| |||| |||||    
T  27357960 taagggtgtgtttgtttcaagttatatttgttgattcccaggtataaaatgatagggatgtatatgtctatg 27358031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 389 - 451
Target Start/End: Complemental strand, 26310335 - 26310273
Alignment:
Q  389 tgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctat 451  Q
    ||||||||| ||||||||||| ||||||| ||||||||||||||||| ||||| |||| ||||    
T  26310335 tgtttgtttaaagttataattgttgattcccgggaataaaatgatagaaatgtatatgtctat 26310273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 380 - 452
Target Start/End: Complemental strand, 6571762 - 6571690
Alignment:
Q  380 ctaagggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatg 452  Q
    |||||||||| ||||||| |||||||| || ||||||  ||| ||||||||||||||||| | ||||||||||    
T  6571762 ctaagggtgtatttgtttaaagttatatttgttgatttccggaaataaaatgataggaatatatatgcctatg 6571690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 380 - 430
Target Start/End: Complemental strand, 40570095 - 40570045
Alignment:
Q  380 ctaagggtgtgtttgtttcaagttataatttttgattctcgggaataaaat 430  Q
    |||||||||||||||||||||||||||||| | |||||  |||||||||||    
T  40570095 ctaagggtgtgtttgtttcaagttataattgtagattcctgggaataaaat 40570045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 388 - 452
Target Start/End: Complemental strand, 14832877 - 14832813
Alignment:
Q  388 gtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatg 452  Q
    ||||||||||||||||||| || |||||||   ||||||||||||||| ||| | ||||||||||    
T  14832877 gtgtttgtttcaagttatatttgttgattcctaggaataaaatgatagaaatatatatgcctatg 14832813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 383 - 433
Target Start/End: Complemental strand, 7007645 - 7007595
Alignment:
Q  383 agggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgat 433  Q
    ||||||||||| |||||||||||| || |||||||| ||| ||||||||||    
T  7007645 agggtgtgtttatttcaagttatatttgttgattcttggggataaaatgat 7007595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 399 - 452
Target Start/End: Complemental strand, 14253578 - 14253525
Alignment:
Q  399 aagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatg 452  Q
    |||||||| || ||||||||||||||||||||||||| ||| | |||| |||||    
T  14253578 aagttatatttgttgattctcgggaataaaatgatagaaatatatatgtctatg 14253525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 387 - 452
Target Start/End: Original strand, 18713660 - 18713725
Alignment:
Q  387 tgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatg 452  Q
    |||||||||||||||||||| || |||||||  || ||||||||||||  ||| | ||||||||||    
T  18713660 tgtgtttgtttcaagttatatttgttgattcatggtaataaaatgatataaatatatatgcctatg 18713725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 384 - 452
Target Start/End: Complemental strand, 1988382 - 1988314
Alignment:
Q  384 gggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatg 452  Q
    |||||||||||||| |||||||| || ||||||   |||||||||||||||| ||| |  |||||||||    
T  1988382 gggtgtgtttgtttgaagttatatttgttgatttctgggaataaaatgatagaaatatacatgcctatg 1988314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 59; Significance: 8e-25; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 382 - 448
Target Start/End: Complemental strand, 25098142 - 25098076
Alignment:
Q  382 aagggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcc 448  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||    
T  25098142 aagggtgtgtttgtttcaagttataatttttgattttcgggaataaaatgataggaatgtatatgcc 25098076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 383 - 452
Target Start/End: Original strand, 9946989 - 9947058
Alignment:
Q  383 agggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatg 452  Q
    ||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||| ||||||||||    
T  9946989 agggtgtgtttgtttaaagttataatttttgattcccgggaataaaatgataggaatgtatatgcctatg 9947058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 383 - 452
Target Start/End: Complemental strand, 33378914 - 33378845
Alignment:
Q  383 agggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatg 452  Q
    ||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||||||    
T  33378914 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatatgcctatg 33378845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 379 - 452
Target Start/End: Complemental strand, 39554259 - 39554186
Alignment:
Q  379 actaagggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatg 452  Q
    ||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| ||||| ||||||||||    
T  39554259 actaagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatgtatatgcctatg 39554186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 383 - 452
Target Start/End: Complemental strand, 48314194 - 48314125
Alignment:
Q  383 agggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatg 452  Q
    ||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||||||    
T  48314194 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatatgcctatg 48314125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 384 - 452
Target Start/End: Complemental strand, 40212960 - 40212892
Alignment:
Q  384 gggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatg 452  Q
    |||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||||||    
T  40212960 gggtgtgtttgtttcaagttataattgttgattcgcgggaataaaatgataggaatgtatatgcctatg 40212892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 381 - 452
Target Start/End: Original strand, 8419586 - 8419657
Alignment:
Q  381 taagggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatg 452  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||||||||||| ||||||| ||||||||||    
T  8419586 taagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 8419657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 385 - 452
Target Start/End: Original strand, 45265049 - 45265116
Alignment:
Q  385 ggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatg 452  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||| ||||||||||    
T  45265049 ggtgtgtttgtttcaagttataattgttgattctcgggaataaaatgattggaatgtatatgcctatg 45265116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 382 - 452
Target Start/End: Original strand, 27213853 - 27213923
Alignment:
Q  382 aagggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatg 452  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||||||||||| ||||| ||||||||||    
T  27213853 aagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatgtatatgcctatg 27213923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 383 - 452
Target Start/End: Complemental strand, 11330065 - 11329996
Alignment:
Q  383 agggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatg 452  Q
    ||||||||||||||||||||||||||| ||||||| ||||||||||||||||| ||||| ||||||||||    
T  11330065 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatgtatatgcctatg 11329996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 383 - 452
Target Start/End: Complemental strand, 27248365 - 27248296
Alignment:
Q  383 agggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatg 452  Q
    ||||||||||||||||||||||||||| ||||||| ||||||||||||||| ||||||| ||||||||||    
T  27248365 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 27248296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 383 - 452
Target Start/End: Complemental strand, 45045698 - 45045629
Alignment:
Q  383 agggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatg 452  Q
    ||||||||||||||| ||||||||||| ||||||| ||||||||||||||||||||||| ||||||||||    
T  45045698 agggtgtgtttgttttaagttataattgttgattcccgggaataaaatgataggaatgtatatgcctatg 45045629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 388 - 441
Target Start/End: Complemental strand, 45449009 - 45448956
Alignment:
Q  388 gtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgt 441  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45449009 gtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgt 45448956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 383 - 452
Target Start/End: Original strand, 48160590 - 48160659
Alignment:
Q  383 agggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatg 452  Q
    ||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| |||| |||||    
T  48160590 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatatgtctatg 48160659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 387 - 452
Target Start/End: Complemental strand, 48341430 - 48341365
Alignment:
Q  387 tgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatg 452  Q
    ||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||||||    
T  48341430 tgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatatgcctatg 48341365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 384 - 452
Target Start/End: Complemental strand, 38544265 - 38544197
Alignment:
Q  384 gggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatg 452  Q
    |||||||||||||||||||||||||| ||||||| ||| ||||||||||||||||||| ||||||||||    
T  38544265 gggtgtgtttgtttcaagttataattgttgattcccggaaataaaatgataggaatgtatatgcctatg 38544197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 383 - 446
Target Start/End: Original strand, 9814217 - 9814280
Alignment:
Q  383 agggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatg 446  Q
    ||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| ||||    
T  9814217 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatatg 9814280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 381 - 452
Target Start/End: Original strand, 25924634 - 25924705
Alignment:
Q  381 taagggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatg 452  Q
    ||||||| ||||||||||||||||||||| ||||||| ||||||||||||||||| ||||| ||||||||||    
T  25924634 taagggtatgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatgtatatgcctatg 25924705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 381 - 452
Target Start/End: Original strand, 27419221 - 27419292
Alignment:
Q  381 taagggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatg 452  Q
    |||||||||||||||||||||||||||||  |||||| ||||||||||||||||| ||||| ||||||||||    
T  27419221 taagggtgtgtttgtttcaagttataattgctgattcccgggaataaaatgatagaaatgtatatgcctatg 27419292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 385 - 452
Target Start/End: Complemental strand, 43949315 - 43949248
Alignment:
Q  385 ggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatg 452  Q
    ||||||||||||||||||||||||| ||||||| ||||||||||||||||| ||||| ||||||||||    
T  43949315 ggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatgtatatgcctatg 43949248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 383 - 452
Target Start/End: Original strand, 35488188 - 35488257
Alignment:
Q  383 agggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatg 452  Q
    ||||||||||||||||||||||||||| ||||||  ||||||||||||||| ||||||| ||||||||||    
T  35488188 agggtgtgtttgtttcaagttataattgttgatttccgggaataaaatgattggaatgtatatgcctatg 35488257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 388 - 452
Target Start/End: Original strand, 38396370 - 38396434
Alignment:
Q  388 gtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatg 452  Q
    ||||||||| |||||||||||| ||||||| ||||||||||||||||||||||| |||| |||||    
T  38396370 gtgtttgttccaagttataattgttgattcccgggaataaaatgataggaatgtatatgtctatg 38396434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 384 - 452
Target Start/End: Complemental strand, 44566116 - 44566048
Alignment:
Q  384 gggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatg 452  Q
    |||||||||||||||||||||||||| ||||||  ||| ||||||||||||||||||| |||| |||||    
T  44566116 gggtgtgtttgtttcaagttataattgttgatttccggaaataaaatgataggaatgtatatgtctatg 44566048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 385 - 452
Target Start/End: Original strand, 41632365 - 41632432
Alignment:
Q  385 ggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatg 452  Q
    ||||||||||||||||||||||||| |||||||  | |||||||||||||| ||||| ||||||||||    
T  41632365 ggtgtgtttgtttcaagttataattgttgattcctgagaataaaatgatagaaatgtatatgcctatg 41632432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 385 - 451
Target Start/End: Complemental strand, 45723277 - 45723211
Alignment:
Q  385 ggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctat 451  Q
    |||||||||||||||||||||| || ||||||| || |||||||||||||||||| | |||||||||    
T  45723277 ggtgtgtttgtttcaagttatatttgttgattcccgagaataaaatgataggaatatatatgcctat 45723211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 383 - 452
Target Start/End: Original strand, 16825353 - 16825422
Alignment:
Q  383 agggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatg 452  Q
    ||||||||||||||||||||||||||| || ||||   ||||||||||||||| ||||| ||||||||||    
T  16825353 agggtgtgtttgtttcaagttataattgttaattcctaggaataaaatgatagaaatgtatatgcctatg 16825422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 374 - 435
Target Start/End: Complemental strand, 18824227 - 18824166
Alignment:
Q  374 tccaaactaagggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgatag 435  Q
    |||||||||||||||||||||||||||||| || || |||||| | ||||||||||||||||    
T  18824227 tccaaactaagggtgtgtttgtttcaagttgtatttgttgatttttgggaataaaatgatag 18824166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 383 - 452
Target Start/End: Original strand, 28904185 - 28904254
Alignment:
Q  383 agggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatg 452  Q
    ||||||||||||||| ||||||||||| ||||||| || |||||||||||||| ||||| |||| |||||    
T  28904185 agggtgtgtttgttttaagttataattgttgattcccgagaataaaatgatagaaatgtatatgtctatg 28904254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 385 - 452
Target Start/End: Original strand, 34930466 - 34930534
Alignment:
Q  385 ggtgtgtttgtttcaa-gttataatttttgattctcgggaataaaatgataggaatgtttatgcctatg 452  Q
    |||||||||||||||| ||||||||| |||||||  |||||||||||||||| ||||| ||||||||||    
T  34930466 ggtgtgtttgtttcaaagttataattgttgattcctgggaataaaatgatagaaatgtatatgcctatg 34930534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 386 - 441
Target Start/End: Complemental strand, 44820323 - 44820268
Alignment:
Q  386 gtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgt 441  Q
    |||||||||||||||||||||||| |||||| || ||||||||||||||| |||||    
T  44820323 gtgtgtttgtttcaagttataattgttgattttcaggaataaaatgatagaaatgt 44820268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 379 - 450
Target Start/End: Original strand, 31921743 - 31921813
Alignment:
Q  379 actaagggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgccta 450  Q
    |||||||||||||||||||||||||||| || || ||| |||| ||||||||||||| ||| | ||||||||    
T  31921743 actaagggtgtgtttgtttcaagttatatttgttcatt-tcggaaataaaatgatagaaatatatatgccta 31921813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 384 - 430
Target Start/End: Complemental strand, 45440979 - 45440933
Alignment:
Q  384 gggtgtgtttgtttcaagttataatttttgattctcgggaataaaat 430  Q
    |||||||||||||||||||||||||| | |||||| |||||||||||    
T  45440979 gggtgtgtttgtttcaagttataattgtagattcttgggaataaaat 45440933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 383 - 452
Target Start/End: Original strand, 25045617 - 25045685
Alignment:
Q  383 agggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatg 452  Q
    |||||||||||||||||||||||| || |||||||| ||| |||||| ||||||||| | ||||| ||||    
T  25045617 agggtgtgtttgtttcaagttatatttgttgattct-ggggataaaaagataggaatatatatgcatatg 25045685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 386 - 452
Target Start/End: Original strand, 6656226 - 6656292
Alignment:
Q  386 gtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatg 452  Q
    ||||||||||||||||||||| || |||||| | || |||||||||||| |||| | ||| ||||||    
T  6656226 gtgtgtttgtttcaagttatatttgttgatttttggaaataaaatgatatgaatatatatacctatg 6656292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 383 - 435
Target Start/End: Original strand, 41684021 - 41684073
Alignment:
Q  383 agggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgatag 435  Q
    |||||||||||||||||||||||| || |||||||  | |||||| |||||||    
T  41684021 agggtgtgtttgtttcaagttatatttgttgattcctgagaataatatgatag 41684073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 57; Significance: 1e-23; HSPs: 24)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 384 - 452
Target Start/End: Complemental strand, 18298183 - 18298115
Alignment:
Q  384 gggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatg 452  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||    
T  18298183 gggtttgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtatatacctatg 18298115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 384 - 452
Target Start/End: Original strand, 18726619 - 18726687
Alignment:
Q  384 gggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatg 452  Q
    |||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||||||    
T  18726619 gggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatatgcctatg 18726687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 380 - 452
Target Start/End: Complemental strand, 26062219 - 26062147
Alignment:
Q  380 ctaagggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatg 452  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||| ||| ||||||    
T  26062219 ctaagggtgtgtttgtttcaagttataattgttgattctcgggaataaaatgatagaaatgtatattcctatg 26062147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 381 - 452
Target Start/End: Original strand, 32660930 - 32661001
Alignment:
Q  381 taagggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatg 452  Q
    ||||||||||||||||||||||||||||| |||||||  |||||||||||||||||||||| ||||||||||    
T  32660930 taagggtgtgtttgtttcaagttataattgttgattcctgggaataaaatgataggaatgtatatgcctatg 32661001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 383 - 452
Target Start/End: Original strand, 1554353 - 1554422
Alignment:
Q  383 agggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatg 452  Q
    ||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| |||| |||||    
T  1554353 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatatgtctatg 1554422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 383 - 452
Target Start/End: Complemental strand, 12710717 - 12710648
Alignment:
Q  383 agggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatg 452  Q
    ||||||||||||||||||||||||||| ||||||| ||||||||||||||||| ||||| ||||||||||    
T  12710717 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatgtatatgcctatg 12710648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 383 - 452
Target Start/End: Complemental strand, 25837983 - 25837914
Alignment:
Q  383 agggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatg 452  Q
    ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||  |||||||||    
T  25837983 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtacatgcctatg 25837914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 383 - 452
Target Start/End: Original strand, 35818423 - 35818492
Alignment:
Q  383 agggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatg 452  Q
    ||||||||||||||||||||||||||| ||||||| ||||||||||||||| ||||||| ||||||||||    
T  35818423 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 35818492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 383 - 452
Target Start/End: Original strand, 37392545 - 37392614
Alignment:
Q  383 agggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatg 452  Q
    ||||||| ||||||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||||||    
T  37392545 agggtgtatttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatatgcctatg 37392614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 383 - 452
Target Start/End: Original strand, 38132736 - 38132805
Alignment:
Q  383 agggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatg 452  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||| |||| |||||    
T  38132736 agggtgtgtttgtttcaagttataattgttgattctcgggaataaaatgatagaaatgtatatgtctatg 38132805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 383 - 452
Target Start/End: Complemental strand, 38364153 - 38364084
Alignment:
Q  383 agggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatg 452  Q
    ||||||||||||||||||||||||||| ||||||| ||||||||||||||| ||||||| ||||||||||    
T  38364153 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatg 38364084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 381 - 452
Target Start/End: Original strand, 26601935 - 26602006
Alignment:
Q  381 taagggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatg 452  Q
    ||||| |||||||||||||| |||||||| ||||||| ||||||||||||||||||||||| ||||||||||    
T  26601935 taaggatgtgtttgtttcaaattataattgttgattcccgggaataaaatgataggaatgtatatgcctatg 26602006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 390 - 452
Target Start/End: Complemental strand, 3050074 - 3050012
Alignment:
Q  390 gtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatg 452  Q
    |||||||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||||||    
T  3050074 gtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatatgcctatg 3050012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 383 - 452
Target Start/End: Original strand, 16313506 - 16313575
Alignment:
Q  383 agggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatg 452  Q
    ||||||||||||||||||||||||||| ||||||  ||||||||||||||||||||||| ||| ||||||    
T  16313506 agggtgtgtttgtttcaagttataattgttgatttccgggaataaaatgataggaatgtatatacctatg 16313575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 384 - 452
Target Start/End: Original strand, 10896217 - 10896285
Alignment:
Q  384 gggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatg 452  Q
    |||||||||||||||||||||||||| ||||||| | ||||||||||||||| ||||| ||||||||||    
T  10896217 gggtgtgtttgtttcaagttataattgttgattcccaggaataaaatgatagaaatgtatatgcctatg 10896285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 383 - 450
Target Start/End: Original strand, 41228713 - 41228780
Alignment:
Q  383 agggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgccta 450  Q
    ||||||||||||||||||||||||||| || |||| ||||||||||||| ||||||||| ||||||||    
T  41228713 agggtgtgtttgtttcaagttataattgttaattcccgggaataaaatggtaggaatgtatatgccta 41228780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 385 - 452
Target Start/End: Complemental strand, 42755937 - 42755870
Alignment:
Q  385 ggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatg 452  Q
    ||||||||||||||||||||||||| |||||||  |||||||||||||||| ||||| ||||||||||    
T  42755937 ggtgtgtttgtttcaagttataattgttgattcctgggaataaaatgatagaaatgtatatgcctatg 42755870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 379 - 452
Target Start/End: Complemental strand, 7317449 - 7317376
Alignment:
Q  379 actaagggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatg 452  Q
    |||||||||||||||||||||||||||| || |||||| ||   ||||||||||||||||| | ||||||||||    
T  7317449 actaagggtgtgtttgtttcaagttatatttgttgattttcaaaaataaaatgataggaatatatatgcctatg 7317376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 388 - 446
Target Start/End: Complemental strand, 7931306 - 7931248
Alignment:
Q  388 gtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatg 446  Q
    |||||||||||||||||||||| |||||||  |||||||||||||||| ||||| ||||    
T  7931306 gtgtttgtttcaagttataattgttgattcctgggaataaaatgatagaaatgtatatg 7931248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 384 - 446
Target Start/End: Original strand, 40197076 - 40197138
Alignment:
Q  384 gggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatg 446  Q
    |||| ||||||||||||||||||||| ||||||| ||| ||||||||||||| ||||| ||||    
T  40197076 gggtatgtttgtttcaagttataattgttgattcccggaaataaaatgatagaaatgtatatg 40197138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 386 - 437
Target Start/End: Original strand, 5020492 - 5020543
Alignment:
Q  386 gtgtgtttgtttcaagttataatttttgattctcgggaataaaatgatagga 437  Q
    ||||||||||||||||||||| || |||||||  ||||||||||||||||||    
T  5020492 gtgtgtttgtttcaagttatatttgttgattcatgggaataaaatgatagga 5020543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 434
Target Start/End: Original strand, 33444627 - 33444676
Alignment:
Q  385 ggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgata 434  Q
    |||||||||||||||||||||| || |||||||  | |||||||||||||    
T  33444627 ggtgtgtttgtttcaagttatatttgttgattcctgagaataaaatgata 33444676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 383 - 432
Target Start/End: Complemental strand, 35394462 - 35394413
Alignment:
Q  383 agggtgtgtttgtttcaagttataatttttgattctcgggaataaaatga 432  Q
    ||||| |||||||||||||||||| || ||||||| || |||||||||||    
T  35394462 agggtttgtttgtttcaagttatatttattgattcacgagaataaaatga 35394413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 381 - 417
Target Start/End: Complemental strand, 8635708 - 8635672
Alignment:
Q  381 taagggtgtgtttgtttcaagttataatttttgattc 417  Q
    |||| |||||||||||||||||||||||| |||||||    
T  8635708 taagagtgtgtttgtttcaagttataattgttgattc 8635672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0189 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0189
Description:

Target: scaffold0189; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 389 - 452
Target Start/End: Original strand, 28957 - 29020
Alignment:
Q  389 tgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatg 452  Q
    ||||||||||||||||||||| |||||| |||||||||||||||||||||||| ||||||||||    
T  28957 tgtttgtttcaagttataattgttgattttcgggaataaaatgataggaatgtatatgcctatg 29020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University