View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12647_low_2 (Length: 404)

Name: NF12647_low_2
Description: NF12647
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12647_low_2
NF12647_low_2
[»] chr8 (47 HSPs)
chr8 (18-232)||(14271210-14271424)
chr8 (233-394)||(14271487-14271648)
chr8 (17-216)||(6886030-6886229)
chr8 (51-200)||(25181290-25181440)
chr8 (46-209)||(19787843-19788007)
chr8 (19-200)||(37527603-37527780)
chr8 (38-200)||(2638091-2638246)
chr8 (271-391)||(22501518-22501638)
chr8 (79-200)||(7984494-7984616)
chr8 (109-177)||(28275688-28275756)
chr8 (298-384)||(6886380-6886466)
chr8 (17-168)||(21315695-21315845)
chr8 (118-169)||(26139310-26139361)
chr8 (18-93)||(26830135-26830209)
chr8 (18-93)||(28275752-28275831)
chr8 (17-165)||(24583735-24583882)
chr8 (18-168)||(24112327-24112476)
chr8 (18-167)||(26887861-26888008)
chr8 (18-93)||(18569922-18569996)
chr8 (18-168)||(19265133-19265282)
chr8 (341-390)||(7984869-7984918)
chr8 (116-168)||(17100865-17100917)
chr8 (116-168)||(18447487-18447539)
chr8 (116-168)||(29765990-29766042)
chr8 (22-159)||(34498673-34498813)
chr8 (18-93)||(23868490-23868564)
chr8 (17-163)||(24389075-24389220)
chr8 (18-93)||(25233373-25233447)
chr8 (18-92)||(17510262-17510335)
chr8 (117-195)||(24381868-24381945)
chr8 (119-169)||(24388931-24388981)
chr8 (17-90)||(13313953-13314025)
chr8 (156-197)||(24380951-24380992)
chr8 (18-75)||(24722642-24722698)
chr8 (116-169)||(27660498-27660551)
chr8 (117-195)||(17997683-17997762)
chr8 (116-167)||(23890222-23890273)
chr8 (18-89)||(29381318-29381388)
chr8 (18-76)||(17997585-17997642)
chr8 (123-169)||(20399771-20399817)
chr8 (116-166)||(29761594-29761644)
chr8 (124-196)||(18570026-18570099)
chr8 (340-385)||(24380652-24380697)
chr8 (340-385)||(24381625-24381670)
chr8 (52-93)||(25227170-25227211)
chr8 (302-379)||(30117961-30118038)
chr8 (340-384)||(2638472-2638516)
[»] chr1 (58 HSPs)
chr1 (18-223)||(15527371-15527576)
chr1 (38-162)||(33191764-33191888)
chr1 (17-197)||(15812001-15812182)
chr1 (18-209)||(44796444-44796625)
chr1 (38-200)||(15572288-15572450)
chr1 (73-199)||(23035503-23035629)
chr1 (40-189)||(25960051-25960199)
chr1 (19-221)||(16112856-16113057)
chr1 (32-232)||(26647881-26648071)
chr1 (19-198)||(24282349-24282520)
chr1 (18-195)||(12011713-12011894)
chr1 (21-193)||(17120396-17120571)
chr1 (278-391)||(44796808-44796921)
chr1 (19-172)||(9786835-9786989)
chr1 (18-195)||(27116697-27116878)
chr1 (285-391)||(15527089-15527195)
chr1 (269-385)||(15811744-15811860)
chr1 (18-89)||(23035648-23035719)
chr1 (263-385)||(23035218-23035340)
chr1 (112-209)||(18100324-18100421)
chr1 (19-129)||(22665507-22665618)
chr1 (118-193)||(34482094-34482169)
chr1 (17-177)||(21333633-21333793)
chr1 (18-166)||(26021778-26021930)
chr1 (54-167)||(51469998-51470112)
chr1 (18-195)||(18735103-18735280)
chr1 (18-171)||(18831543-18831694)
chr1 (108-169)||(13267299-13267360)
chr1 (122-195)||(16786624-16786697)
chr1 (292-385)||(35133589-35133682)
chr1 (18-168)||(27545753-27545903)
chr1 (17-167)||(12209642-12209791)
chr1 (18-168)||(18826725-18826874)
chr1 (18-169)||(28009179-28009328)
chr1 (18-190)||(20107205-20107377)
chr1 (18-167)||(26611933-26612081)
chr1 (286-391)||(26647649-26647754)
chr1 (20-168)||(27972922-27973070)
chr1 (19-81)||(16360874-16360933)
chr1 (18-168)||(24055046-24055195)
chr1 (18-167)||(15159397-15159545)
chr1 (119-169)||(16915840-16915890)
chr1 (116-169)||(21665659-21665712)
chr1 (109-162)||(22621316-22621369)
chr1 (340-391)||(15571982-15572033)
chr1 (18-93)||(25403042-25403116)
chr1 (19-93)||(9402661-9402734)
chr1 (308-376)||(18100084-18100152)
chr1 (340-379)||(16114553-16114592)
chr1 (17-92)||(18528198-18528272)
chr1 (340-391)||(33192104-33192155)
chr1 (342-391)||(9783273-9783322)
chr1 (116-169)||(14782010-14782063)
chr1 (52-93)||(31234926-31234967)
chr1 (116-152)||(728632-728668)
chr1 (52-92)||(15542973-15543013)
chr1 (18-70)||(21983710-21983761)
chr1 (343-391)||(24282757-24282805)
[»] chr5 (35 HSPs)
chr5 (18-232)||(18831544-18831758)
chr5 (18-194)||(18938904-18939080)
chr5 (19-200)||(18514005-18514185)
chr5 (48-209)||(18206416-18206579)
chr5 (18-199)||(24340950-24341130)
chr5 (18-195)||(26121715-26121896)
chr5 (285-391)||(18831920-18832026)
chr5 (18-199)||(24264321-24264500)
chr5 (19-195)||(24265879-24266054)
chr5 (19-195)||(24342510-24342685)
chr5 (291-379)||(31600319-31600407)
chr5 (50-162)||(24661487-24661601)
chr5 (119-195)||(24162617-24162693)
chr5 (105-189)||(22871798-22871883)
chr5 (18-169)||(16522449-16522599)
chr5 (18-167)||(28665834-28665982)
chr5 (105-193)||(24261501-24261590)
chr5 (118-177)||(19007423-19007483)
chr5 (20-169)||(23388122-23388270)
chr5 (18-166)||(20314373-20314520)
chr5 (25-168)||(21914670-21914812)
chr5 (18-169)||(34131429-34131579)
chr5 (18-76)||(20859721-20859778)
chr5 (116-177)||(23338358-23338420)
chr5 (116-169)||(24321129-24321182)
chr5 (116-169)||(24658903-24658956)
chr5 (283-391)||(18939216-18939324)
chr5 (116-192)||(19762150-19762225)
chr5 (340-396)||(24849776-24849832)
chr5 (340-384)||(34488609-34488653)
chr5 (122-177)||(17470167-17470222)
chr5 (18-92)||(24321207-24321281)
chr5 (116-163)||(26252950-26252996)
chr5 (343-384)||(18227368-18227409)
chr5 (121-162)||(20859803-20859844)
[»] chr3 (53 HSPs)
chr3 (18-232)||(3115230-3115444)
chr3 (22-232)||(5509412-5509623)
chr3 (51-221)||(16222891-16223061)
chr3 (18-195)||(8144542-8144723)
chr3 (46-200)||(3429802-3429957)
chr3 (19-200)||(17205820-17206002)
chr3 (265-391)||(3115002-3115128)
chr3 (19-164)||(2722760-2722908)
chr3 (21-177)||(3386254-3386409)
chr3 (109-200)||(17134557-17134648)
chr3 (17-167)||(41509536-41509685)
chr3 (18-183)||(31284863-31285029)
chr3 (18-166)||(8115839-8115986)
chr3 (17-167)||(2166559-2166708)
chr3 (268-391)||(5509750-5509873)
chr3 (19-168)||(19909585-19909733)
chr3 (115-193)||(22246437-22246515)
chr3 (119-195)||(23698972-23699048)
chr3 (119-195)||(23717427-23717503)
chr3 (119-195)||(23735883-23735959)
chr3 (18-168)||(19533164-19533313)
chr3 (116-195)||(22470996-22471075)
chr3 (18-190)||(19575091-19575263)
chr3 (18-167)||(12372858-12373011)
chr3 (116-168)||(27073391-27073443)
chr3 (18-195)||(27413185-27413362)
chr3 (302-384)||(16223206-16223288)
chr3 (17-169)||(16244600-16244751)
chr3 (18-166)||(20022466-20022613)
chr3 (105-195)||(19389584-19389675)
chr3 (116-169)||(19169545-19169598)
chr3 (19-101)||(8268015-8268096)
chr3 (18-167)||(14977135-14977283)
chr3 (117-195)||(23754930-23755008)
chr3 (118-166)||(19170719-19170767)
chr3 (18-195)||(8171066-8171243)
chr3 (140-209)||(27853488-27853558)
chr3 (116-189)||(13907164-13907236)
chr3 (342-391)||(18735563-18735612)
chr3 (116-193)||(18735853-18735930)
chr3 (18-90)||(19169449-19169519)
chr3 (22-90)||(23699104-23699172)
chr3 (22-90)||(23717559-23717627)
chr3 (22-90)||(23736015-23736083)
chr3 (18-90)||(23755062-23755134)
chr3 (118-168)||(16228904-16228954)
chr3 (18-92)||(20121947-20122020)
chr3 (18-76)||(20886194-20886252)
chr3 (116-177)||(6291867-6291927)
chr3 (52-93)||(8882084-8882125)
chr3 (18-59)||(16222433-16222474)
chr3 (340-385)||(17134845-17134889)
chr3 (340-384)||(19388150-19388194)
[»] chr7 (64 HSPs)
chr7 (18-232)||(19154287-19154501)
chr7 (18-232)||(20753686-20753900)
chr7 (19-209)||(18202053-18202242)
chr7 (18-221)||(1585608-1585810)
chr7 (19-200)||(3735666-3735847)
chr7 (19-209)||(3189927-3190118)
chr7 (19-200)||(4987579-4987762)
chr7 (19-200)||(4991677-4991860)
chr7 (19-163)||(8310382-8310525)
chr7 (19-209)||(10585770-10585961)
chr7 (19-200)||(6014573-6014756)
chr7 (288-384)||(19154537-19154633)
chr7 (288-384)||(20753936-20754032)
chr7 (19-90)||(2573668-2573739)
chr7 (18-169)||(17190090-17190240)
chr7 (19-90)||(2570254-2570325)
chr7 (105-195)||(7398756-7398847)
chr7 (108-193)||(17830754-17830839)
chr7 (18-169)||(39272045-39272195)
chr7 (18-171)||(16057793-16057945)
chr7 (17-167)||(9134161-9134310)
chr7 (307-385)||(1588957-1589035)
chr7 (307-391)||(3189631-3189715)
chr7 (116-168)||(13288294-13288346)
chr7 (116-195)||(15171340-15171419)
chr7 (18-167)||(13263633-13263781)
chr7 (112-209)||(1588657-1588754)
chr7 (18-196)||(6007041-6007222)
chr7 (116-168)||(8318065-8318117)
chr7 (18-169)||(8977883-8978033)
chr7 (17-167)||(12330425-12330574)
chr7 (115-177)||(141256-141318)
chr7 (116-166)||(2565606-2565656)
chr7 (116-169)||(8052985-8053038)
chr7 (340-385)||(18201787-18201832)
chr7 (343-391)||(1585949-1585997)
chr7 (17-167)||(4820256-4820404)
chr7 (18-93)||(13756097-13756171)
chr7 (52-95)||(15870715-15870758)
chr7 (116-167)||(25692246-25692297)
chr7 (18-76)||(13278528-13278585)
chr7 (116-166)||(18362592-18362642)
chr7 (139-192)||(15611563-15611616)
chr7 (116-169)||(17078217-17078270)
chr7 (118-175)||(21502344-21502401)
chr7 (307-391)||(3736058-3736142)
chr7 (340-384)||(10418309-10418353)
chr7 (18-169)||(23297721-23297871)
chr7 (137-192)||(5531210-5531265)
chr7 (150-197)||(6039871-6039918)
chr7 (18-73)||(9917535-9917590)
chr7 (18-73)||(9925447-9925502)
chr7 (118-169)||(13756022-13756073)
chr7 (17-76)||(18362682-18362740)
chr7 (340-391)||(23897015-23897066)
chr7 (22-76)||(2565513-2565566)
chr7 (18-76)||(3586190-3586246)
chr7 (117-195)||(9501448-9501525)
chr7 (340-390)||(9767537-9767587)
chr7 (116-190)||(9863283-9863356)
chr7 (139-177)||(10611221-10611259)
chr7 (340-384)||(1810657-1810701)
chr7 (17-73)||(8053088-8053143)
chr7 (147-195)||(18467824-18467872)
[»] chr4 (33 HSPs)
chr4 (18-216)||(20828664-20828862)
chr4 (19-200)||(22350756-22350939)
chr4 (21-197)||(5680271-5680446)
chr4 (46-199)||(19927377-19927531)
chr4 (18-192)||(14572817-14572995)
chr4 (19-209)||(17277178-17277358)
chr4 (286-379)||(20828443-20828536)
chr4 (68-209)||(19562578-19562718)
chr4 (17-166)||(16730643-16730791)
chr4 (18-169)||(17673059-17673213)
chr4 (38-200)||(19093657-19093811)
chr4 (17-177)||(8968622-8968782)
chr4 (52-167)||(19604395-19604512)
chr4 (116-169)||(25095803-25095856)
chr4 (115-195)||(25024526-25024606)
chr4 (137-194)||(9850319-9850376)
chr4 (18-169)||(11252704-11252854)
chr4 (18-93)||(7583369-7583443)
chr4 (118-193)||(26114807-26114882)
chr4 (18-167)||(17710697-17710845)
chr4 (21-169)||(17335928-17336075)
chr4 (17-93)||(10105653-10105728)
chr4 (18-92)||(17217933-17218006)
chr4 (340-385)||(10236342-10236387)
chr4 (18-154)||(22171130-22171265)
chr4 (31-92)||(37740995-37741055)
chr4 (17-93)||(11781911-11781986)
chr4 (17-93)||(17108041-17108116)
chr4 (158-197)||(10236048-10236087)
chr4 (18-93)||(12577952-12578026)
chr4 (116-169)||(9537315-9537368)
chr4 (340-384)||(5691508-5691552)
chr4 (340-384)||(12836307-12836351)
[»] chr2 (60 HSPs)
chr2 (18-232)||(19198978-19199192)
chr2 (19-221)||(32086402-32086603)
chr2 (19-200)||(23010630-23010812)
chr2 (19-209)||(11464898-11465088)
chr2 (58-209)||(18552656-18552807)
chr2 (19-209)||(29032248-29032439)
chr2 (21-200)||(20173520-20173698)
chr2 (46-209)||(29850430-29850594)
chr2 (22-200)||(29834205-29834384)
chr2 (38-166)||(25883963-25884094)
chr2 (20-170)||(23006133-23006284)
chr2 (19-200)||(24381406-24381589)
chr2 (18-94)||(13777497-13777573)
chr2 (18-195)||(25531578-25531754)
chr2 (19-99)||(18459490-18459570)
chr2 (18-165)||(24089802-24089948)
chr2 (88-198)||(19139088-19139199)
chr2 (18-169)||(25536924-25537073)
chr2 (92-194)||(28766260-28766363)
chr2 (18-193)||(20175209-20175387)
chr2 (18-169)||(25921900-25922050)
chr2 (18-169)||(27908048-27908198)
chr2 (307-391)||(25883634-25883718)
chr2 (17-167)||(28929713-28929862)
chr2 (18-167)||(17629293-17629441)
chr2 (18-169)||(15340319-15340469)
chr2 (116-168)||(26659688-26659740)
chr2 (118-196)||(17199007-17199086)
chr2 (124-195)||(17891147-17891218)
chr2 (117-195)||(17181398-17181475)
chr2 (21-190)||(27540759-27540928)
chr2 (19-131)||(28605252-28605364)
chr2 (116-168)||(29144073-29144125)
chr2 (17-76)||(25886867-25886925)
chr2 (18-76)||(17674676-17674733)
chr2 (311-385)||(19198775-19198849)
chr2 (20-169)||(22378410-22378558)
chr2 (147-197)||(26652208-26652258)
chr2 (287-391)||(32086727-32086831)
chr2 (116-167)||(17350474-17350525)
chr2 (116-195)||(27419353-27419431)
chr2 (116-195)||(27420499-27420577)
chr2 (118-195)||(18121111-18121189)
chr2 (138-195)||(26292234-26292291)
chr2 (116-193)||(45620798-45620874)
chr2 (18-54)||(17198932-17198968)
chr2 (17-93)||(31803755-31803830)
chr2 (347-391)||(45572660-45572704)
chr2 (347-391)||(45576327-45576371)
chr2 (347-391)||(45579994-45580038)
chr2 (347-391)||(45583661-45583705)
chr2 (347-391)||(45587328-45587372)
chr2 (347-391)||(45590995-45591039)
chr2 (347-391)||(45594662-45594706)
chr2 (347-391)||(45598329-45598373)
chr2 (347-391)||(45601996-45602040)
chr2 (347-391)||(45605663-45605707)
chr2 (347-391)||(45609330-45609374)
chr2 (347-391)||(45612997-45613041)
chr2 (347-391)||(45616664-45616708)
[»] chr6 (42 HSPs)
chr6 (19-195)||(21687728-21687903)
chr6 (19-177)||(22569187-22569343)
chr6 (18-195)||(22565062-22565240)
chr6 (19-189)||(9898473-9898644)
chr6 (19-200)||(11178009-11178190)
chr6 (19-185)||(19245646-19245811)
chr6 (22-209)||(6629517-6629705)
chr6 (104-195)||(22783869-22783960)
chr6 (18-195)||(8038548-8038729)
chr6 (54-209)||(17388761-17388917)
chr6 (20-209)||(31879207-31879393)
chr6 (52-195)||(18074207-18074352)
chr6 (15-166)||(9519088-9519239)
chr6 (17-169)||(8066041-8066191)
chr6 (23-209)||(8245974-8246154)
chr6 (137-195)||(23644815-23644873)
chr6 (119-196)||(12988651-12988729)
chr6 (114-195)||(2587783-2587864)
chr6 (115-195)||(13137003-13137082)
chr6 (340-384)||(22569609-22569653)
chr6 (18-169)||(24469117-24469265)
chr6 (18-195)||(17383060-17383236)
chr6 (114-169)||(22411927-22411982)
chr6 (18-177)||(9840389-9840552)
chr6 (116-166)||(11193099-11193149)
chr6 (17-162)||(14078364-14078508)
chr6 (18-168)||(1636034-1636180)
chr6 (52-93)||(22849457-22849498)
chr6 (52-168)||(24479397-24479511)
chr6 (18-90)||(14723007-14723078)
chr6 (18-90)||(21846379-21846450)
chr6 (17-93)||(22409239-22409314)
chr6 (340-391)||(8246379-8246430)
chr6 (18-76)||(12988550-12988608)
chr6 (18-93)||(19578202-19578276)
chr6 (18-93)||(19594643-19594717)
chr6 (22-93)||(20004879-20004949)
chr6 (116-166)||(14638729-14638779)
chr6 (18-76)||(21153147-21153204)
chr6 (341-391)||(21687422-21687472)
chr6 (116-169)||(21840725-21840778)
chr6 (117-169)||(21846300-21846352)
[»] scaffold0386 (4 HSPs)
scaffold0386 (19-197)||(5433-5610)
scaffold0386 (18-200)||(14071-14251)
scaffold0386 (48-197)||(9688-9837)
scaffold0386 (340-384)||(9411-9455)
[»] scaffold0062 (1 HSPs)
scaffold0062 (19-209)||(42059-42251)
[»] scaffold1339 (1 HSPs)
scaffold1339 (21-195)||(598-776)
[»] scaffold0024 (2 HSPs)
scaffold0024 (19-200)||(40650-40831)
scaffold0024 (308-385)||(41059-41136)
[»] scaffold0005 (1 HSPs)
scaffold0005 (18-192)||(244381-244559)
[»] scaffold0671 (1 HSPs)
scaffold0671 (52-195)||(2793-2937)
[»] scaffold0015 (1 HSPs)
scaffold0015 (286-391)||(202125-202230)
[»] scaffold0056 (2 HSPs)
scaffold0056 (18-195)||(22340-22517)
scaffold0056 (18-76)||(53850-53907)
[»] scaffold0043 (2 HSPs)
scaffold0043 (117-193)||(89033-89109)
scaffold0043 (341-384)||(88736-88779)
[»] scaffold1156 (1 HSPs)
scaffold1156 (18-76)||(618-675)
[»] scaffold0016 (1 HSPs)
scaffold0016 (20-169)||(4198-4346)
[»] scaffold0451 (2 HSPs)
scaffold0451 (311-391)||(10385-10465)
scaffold0451 (17-167)||(5088-5237)
[»] scaffold0111 (1 HSPs)
scaffold0111 (117-169)||(20968-21020)
[»] scaffold0263 (2 HSPs)
scaffold0263 (17-76)||(16621-16679)
scaffold0263 (116-169)||(16719-16772)
[»] scaffold0032 (1 HSPs)
scaffold0032 (116-169)||(102268-102321)
[»] scaffold0054 (2 HSPs)
scaffold0054 (17-96)||(73029-73107)
scaffold0054 (118-177)||(73128-73188)
[»] scaffold0019 (1 HSPs)
scaffold0019 (138-197)||(27625-27684)
[»] scaffold0034 (1 HSPs)
scaffold0034 (18-92)||(81090-81163)


Alignment Details
Target: chr8 (Bit Score: 211; Significance: 1e-115; HSPs: 47)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 18 - 232
Target Start/End: Original strand, 14271210 - 14271424
Alignment:
Q  18 ttagttacacatggtaactaaagacaagatacaaaaagataaaaacataccctagaaaagataggagaagatagaactcctcctagtctcctagaatcgc 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14271210 ttagttacacatggtaactaaagacaagatacaaaaagataaaaacataccctagaaaagataggagaagatagaactcctcctagtctcctagaatcgc 14271309  T
Q  118 cttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaaggcggtatttacagggaaagtttccacctaacttagggtaaaagtatgggt 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14271310 cttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaaggcggtatttacagggaaagtttccacctaacttagggtaaaagtatgggt 14271409  T
Q  218 tttccaggggtgaaa 232  Q
    |||||||||| ||||    
T  14271410 tttccaggggcgaaa 14271424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 233 - 394
Target Start/End: Original strand, 14271487 - 14271648
Alignment:
Q  233 ggcgcgctacgcttagccagccatgcgctcccaggcgcttttctgaagctcccaggcgcttcagtgtaaattcagtgctgaaatgcctgtcttcttcgct 332  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14271487 ggcgcgctacgcttagccagccatgcgctcccaggcgcttttctgaagctcccaggcgcttcagtgtaaattcagtgctgaaatgcctgtcttcttcgct 14271586  T
Q  333 cgtttttgtgttttcttcaatgtaagatgtctaggaacttgggaacataattcgtccctatg 394  Q
    |||||||||||||||||||||||||||||||| |||||||| ||||||||||| ||||||||    
T  14271587 cgtttttgtgttttcttcaatgtaagatgtcttggaacttgagaacataattcctccctatg 14271648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 136; E-Value: 8e-71
Query Start/End: Original strand, 17 - 216
Target Start/End: Original strand, 6886030 - 6886229
Alignment:
Q  17 attagttacacatggtaactaaagacaagatacaaaaagataaaaacataccctagaaaagataggagaagatagaactcctcctagtctcctagaatcg 116  Q
    ||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| | |||||||||||     
T  6886030 attagttactcatggtaactaaagacaagatataaaaagataaaaacataccctagaatagataggagaagatagaactcctccttgactcctagaatct 6886129  T
Q  117 ccttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaaggcggtatttacagggaaagtttccacctaacttagggtaaaagtatggg 216  Q
    |||||||| |||||||||| ||||||||||||||||||||||||||||||| || |||||| ||||||||||||||||| | ||| | ||||| ||||||    
T  6886130 ccttcctcatgaactgctctagttctgaacgagaaattatgaatgaggaagacgatatttatagggaaagtttccacctgaattaagctaaaaatatggg 6886229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 51 - 200
Target Start/End: Complemental strand, 25181440 - 25181290
Alignment:
Q  51 aaaagataaaaacataccctagaaaagataggagaagatagaactcctcctagtctcctagaatcgccttcctcttgaactgctccagttctgaacgaga 150  Q
    |||||||||||||||||| || |||||||| ||||||||| ||||| |||| | |||||||||| ||||||||||||| |||||||||||||||||||||    
T  25181440 aaaagataaaaacataccataaaaaagatatgagaagataaaactcttccttggctcctagaatagccttcctcttgagctgctccagttctgaacgaga 25181341  T
Q  151 aattatgaatgaggaaggc-ggtatttacagggaaagtttccacctaactt 200  Q
    |||| |||||||||||||| |||||||| ||| ||||||||||||||||||    
T  25181340 aattgtgaatgaggaaggctggtatttataggaaaagtttccacctaactt 25181290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 46 - 209
Target Start/End: Original strand, 19787843 - 19788007
Alignment:
Q  46 atacaaaaagataaaaacataccctagaaaagataggagaagatagaactcctcctagtctcctagaatcgccttcctcttgaactgctccagttctgaa 145  Q
    |||| |||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||| || ||| ||||||||||||||||||||||||||||||    
T  19787843 atactaaaagataaaaacacaccctagaaaagataggagaagatataactcctccttgactcataaaatagccttcctcttgaactgctccagttctgaa 19787942  T
Q  146 cgagaaattatgaatgaggaaggc-ggtatttacagggaaagtttccacctaacttagggtaaaa 209  Q
    ||||||||| ||||| |||||| | | |||||| | ||||||||| |||||||||| || |||||    
T  19787943 cgagaaattgtgaataaggaagactgatatttataaggaaagttttcacctaacttgggctaaaa 19788007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 19 - 200
Target Start/End: Complemental strand, 37527780 - 37527603
Alignment:
Q  19 tagttacacatggtaactaaagacaagatacaaaaagataaaaacataccctagaaaagataggagaagatagaactcctcctagtctcctagaatcgcc 118  Q
    |||||||||||| |||||||    || |||| ||||||||||| ||||||||||||||||||| |||||||| |||||||||| | |||||||||         
T  37527780 tagttacacatgataactaagataaaaatactaaaagataaaagcataccctagaaaagatagaagaagatataactcctccttggctcctagaa----- 37527686  T
Q  119 ttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaaggc-ggtatttacagggaaagtttccacctaactt 200  Q
    ||||||||||||||||| |||||||||||| |||||||||||||||||| | |||||||| ||| ||| ||||||||||||||    
T  37527685 ttcctcttgaactgctctagttctgaacgataaattatgaatgaggaagactggtatttataggaaaaatttccacctaactt 37527603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 38 - 200
Target Start/End: Original strand, 2638091 - 2638246
Alignment:
Q  38 aagacaagatacaaaaagataaaaacataccctagaaaagataggagaagatagaactcctcctagtctcctagaatcgccttcctcttgaactgctcca 137  Q
    ||||||| |||| |||||||||||||| ||| |||||||||| |||||||||||||||||||||   ||||||||||| |||| ||||||||||||||||    
T  2638091 aagacaaaatactaaaagataaaaacaaaccatagaaaagattggagaagatagaactcctccttagctcctagaatctccttactcttgaactgctcca 2638190  T
Q  138 gttctgaacgagaaattatgaatgaggaaggcggtatttacagggaaagtttccacctaactt 200  Q
     || |||||||||| || |||||||       |||||||| ||||||||||||||||||||||    
T  2638191 attttgaacgagaagttgtgaatga-------ggtatttatagggaaagtttccacctaactt 2638246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 271 - 391
Target Start/End: Original strand, 22501518 - 22501638
Alignment:
Q  271 ttttctgaagctcccaggcgcttcagtgtaaattcagtgctgaaatgcctgtcttcttcgctcgtttttgtgttttcttcaatgtaagatgtctaggaac 370  Q
    ||||| ||||| ||||||||||||| |||||||||||| ||||||||||||||| |||| | |||||| ||||||||||||||||||||| ||| |||||    
T  22501518 ttttccgaagcacccaggcgcttcaatgtaaattcagttctgaaatgcctgtctacttctcccgttttggtgttttcttcaatgtaagatatcttggaac 22501617  T
Q  371 ttgggaacataattcgtccct 391  Q
    ||||||||| ||||| |||||    
T  22501618 ttgggaacagaattcctccct 22501638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 79 - 200
Target Start/End: Original strand, 7984494 - 7984616
Alignment:
Q  79 taggagaagatagaactcctcctagtctcctagaatcgccttcctcttgaactgctccagttctgaacga-gaaattatgaatgaggaaggcggtattta 177  Q
    |||| |||||||||||||||||  | || ||||||| |||||||||| |||||||||||||| |||||||  ||||| ||||||| ||||||||||||||    
T  7984494 taggggaagatagaactcctccctgacttctagaattgccttcctctagaactgctccagttatgaacgataaaattgtgaatgacgaaggcggtattta 7984593  T
Q  178 cagggaaagtttccacctaactt 200  Q
     | ||||||||||||||||||||    
T  7984594 tatggaaagtttccacctaactt 7984616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 109 - 177
Target Start/End: Complemental strand, 28275756 - 28275688
Alignment:
Q  109 tagaatcgccttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaaggcggtattta 177  Q
    ||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||| ||||||    
T  28275756 tagaatcgccttcctcttgaactgctccatttatgaacgagaaattatgaatgaggaaggcgatattta 28275688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 298 - 384
Target Start/End: Original strand, 6886380 - 6886466
Alignment:
Q  298 gtaaattcagtgctgaaatgcctgtcttcttcgctcgtttttgtgttttcttcaatgtaagatgtctaggaacttgggaacataatt 384  Q
    |||||||||||| |||||||||| | ||||||| | |||||  |||||||||||||||||||||||| |||||||||||||| ||||    
T  6886380 gtaaattcagtgttgaaatgccttttttcttcgtttgttttgatgttttcttcaatgtaagatgtcttggaacttgggaacagaatt 6886466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 17 - 168
Target Start/End: Original strand, 21315695 - 21315845
Alignment:
Q  17 attagttacacatggtaactaaagacaagatacaaaaagataaaaacataccctagaaaagataggagaagatag-aactcctcctagtctcctagaatc 115  Q
    ||||||||||||| ||||||||| | ||  |||  |||||||||||||||||||||||||   |||||||||||| ||||||||| |  ||  || |||     
T  21315695 attagttacacatagtaactaaaaaaaaattac-taaagataaaaacataccctagaaaatcaaggagaagatagaaactcctccgaagct-ataaaatt 21315792  T
Q  116 gccttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaagg 168  Q
    ||||||||||||||||||  |||||||||||| |||||| | |||||||||||    
T  21315793 gccttcctcttgaactgccacagttctgaacgcgaaatttttaatgaggaagg 21315845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 118 - 169
Target Start/End: Original strand, 26139310 - 26139361
Alignment:
Q  118 cttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaaggc 169  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  26139310 cttcctcttgaactgctccagttctgaacgagaaattctgaatgaggaaggc 26139361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 18 - 93
Target Start/End: Complemental strand, 26830209 - 26830135
Alignment:
Q  18 ttagttacacatggtaactaaagacaagatacaaaaagataaaaacataccctagaaaagataggagaagatagaa 93  Q
    |||||||||||||||||||||| ||||||||| ||| ||||||||||||||||||||||   ||||||||||||||    
T  26830209 ttagttacacatggtaactaaaaacaagatactaaa-gataaaaacataccctagaaaatcaaggagaagatagaa 26830135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 18 - 93
Target Start/End: Complemental strand, 28275831 - 28275752
Alignment:
Q  18 ttagttacacatggtaactaaagacaagatacaaaaag----ataaaaacataccctagaaaagataggagaagatagaa 93  Q
    |||||||||||||||||||||| ||||||||||||||     | ||||| ||||||||||||||||||||||||||||||    
T  28275831 ttagttacacatggtaactaaatacaagatacaaaaaacaaaaaaaaaaaataccctagaaaagataggagaagatagaa 28275752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 17 - 165
Target Start/End: Complemental strand, 24583882 - 24583735
Alignment:
Q  17 attagttacacatggtaactaaagacaagatacaaaaagataaaaacataccctagaaaagataggagaagatag-aactcctcctagtctcctagaatc 115  Q
    ||||||||||||||||||||||| ||||  ||| ||| |||||||||||||||||||| |   |||||||||||| ||||||| | |   | ||| |||     
T  24583882 attagttacacatggtaactaaaaacaaattactaaa-gataaaaacataccctagaagatcaaggagaagatagaaactccttcga-agttctataatt 24583785  T
Q  116 gccttcctcttgaactgctccagttctgaacgagaaattatgaatgagga 165  Q
    |  ||||||||||||||||||| |||||||| ||||||| ||||||||||    
T  24583784 gttttcctcttgaactgctccatttctgaactagaaattctgaatgagga 24583735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 18 - 168
Target Start/End: Complemental strand, 24112476 - 24112327
Alignment:
Q  18 ttagttacacatggtaactaaagacaagatacaaaaagataaaaacataccctagaaaagataggagaagatagaa-ctcctcctagtctcctagaatcg 116  Q
    |||||||||||||||||||||| ||||  ||| ||| ||||||| ||||||||||||||   ||||||||||| || ||| ||  |  ||| || | | |    
T  24112476 ttagttacacatggtaactaaaaacaaattaccaaa-gataaaagcataccctagaaaatcaaggagaagataaaaactcttctaaagctc-taaagttg 24112379  T
Q  117 ccttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaagg 168  Q
     ||||||||||||||||  ||||||||||||||||||| |||||||||||||    
T  24112378 tcttcctcttgaactgccacagttctgaacgagaaattctgaatgaggaagg 24112327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 167
Target Start/End: Original strand, 26887861 - 26888008
Alignment:
Q  18 ttagttacacatggtaactaaagacaagatacaaaaagataaaaacataccctagaaaagataggagaagatagaactcctcct-agtctcctagaatcg 116  Q
    |||| ||||||||||||||||| ||||  ||| ||| ||||||| ||||||||||||||   ||||||||||||||   ||||| |  |||| | | | |    
T  26887861 ttagctacacatggtaactaaaaacaaattactaaa-gataaaa-cataccctagaaaatcaaggagaagatagaaactctcctgaagctccaa-agttg 26887957  T
Q  117 ccttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaag 167  Q
    |||||||||||||||||  ||||||||||||||||||| ||||||||||||    
T  26887958 ccttcctcttgaactgccacagttctgaacgagaaattctgaatgaggaag 26888008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 18 - 93
Target Start/End: Original strand, 18569922 - 18569996
Alignment:
Q  18 ttagttacacatggtaactaaagacaagatacaaaaagataaaaacataccctagaaaagataggagaagatagaa 93  Q
    |||||||||||||||||||||| ||||| ||| ||| |||||||||||| |||||||||   ||||||||||||||    
T  18569922 ttagttacacatggtaactaaaaacaagctactaaa-gataaaaacatatcctagaaaatcaaggagaagatagaa 18569996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 18 - 168
Target Start/End: Original strand, 19265133 - 19265282
Alignment:
Q  18 ttagttacacatggtaactaaagacaagatacaaaaagataaaaacataccctagaaaagataggagaagatagaactcctcct-agtctcctagaatcg 116  Q
    |||||||||||||||||||||| ||||  ||||||| ||||||||||||||||||||||   || |||||||||||    || | |  |||| |   | |    
T  19265133 ttagttacacatggtaactaaaaacaaattacaaaa-gataaaaacataccctagaaaatcaagaagaagatagaaactatcttgaagctccaaagct-g 19265230  T
Q  117 ccttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaagg 168  Q
    |||||||||||||||||  ||||||||||||||||||| ||||| |||||||    
T  19265231 ccttcctcttgaactgccacagttctgaacgagaaattttgaattaggaagg 19265282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 341 - 390
Target Start/End: Original strand, 7984869 - 7984918
Alignment:
Q  341 tgttttcttcaatgtaagatgtctaggaacttgggaacataattcgtccc 390  Q
    |||||||||||||||||||||||| ||||||| |||||||||||| ||||    
T  7984869 tgttttcttcaatgtaagatgtcttggaactttggaacataattcctccc 7984918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 116 - 168
Target Start/End: Complemental strand, 17100917 - 17100865
Alignment:
Q  116 gccttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaagg 168  Q
    ||||||||||||||||||  |||||||||||||||| || |||||||||||||    
T  17100917 gccttcctcttgaactgccacagttctgaacgagaatttctgaatgaggaagg 17100865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 116 - 168
Target Start/End: Complemental strand, 18447539 - 18447487
Alignment:
Q  116 gccttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaagg 168  Q
    ||||||||||||||||||  |||||||||| |||||||| |||||||||||||    
T  18447539 gccttcctcttgaactgccacagttctgaatgagaaattctgaatgaggaagg 18447487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 116 - 168
Target Start/End: Complemental strand, 29766042 - 29765990
Alignment:
Q  116 gccttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaagg 168  Q
    ||||||||||||||||||| ||||| ||||| ||||||| |||||||||||||    
T  29766042 gccttcctcttgaactgcttcagttttgaacaagaaattctgaatgaggaagg 29765990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 22 - 159
Target Start/End: Original strand, 34498673 - 34498813
Alignment:
Q  22 ttacacatggtaactaaagacaagatacaaaaagataaaaacataccctagaaaagataggagaagatagaactcctcctagt----ctcctagaatcgc 117  Q
    |||||||| ||||||||||||||  ||  ||| ||||||||||||||||||||||   ||||||||||| ||   |||||  |    |||||||||| ||    
T  34498673 ttacacatagtaactaaagacaaattattaaa-gataaaaacataccctagaaaaacaaggagaagatataaaaactccttttgaagctcctagaattgc 34498771  T
Q  118 cttcctcttgaactgctccagttctgaacgagaaattatgaa 159  Q
    |||| | |||||||||| | ||||||||||||||||| ||||    
T  34498772 cttcattttgaactgcttccgttctgaacgagaaattgtgaa 34498813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 18 - 93
Target Start/End: Complemental strand, 23868564 - 23868490
Alignment:
Q  18 ttagttacacatggtaactaaagacaagatacaaaaagataaaaacataccctagaaaagataggagaagatagaa 93  Q
    |||||||||||||||||||||| ||||  ||| ||| |||||||||||||||| |||||   ||||||||||||||    
T  23868564 ttagttacacatggtaactaaaaacaaattactaaa-gataaaaacataccctggaaaatcaaggagaagatagaa 23868490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 17 - 163
Target Start/End: Original strand, 24389075 - 24389220
Alignment:
Q  17 attagttacacatggtaactaaagacaagatacaaaaagataaaaacataccctagaaaagataggagaagatag-aactcctcctagtctcctagaatc 115  Q
    ||||||||||||||||||||||| | ||  |||  |||||||||||||||||||| ||||   |||||||||||| |||||  |  |  |||| | | |     
T  24389075 attagttacacatggtaactaaaaaaaaattac-taaagataaaaacataccctaaaaaatcaaggagaagatagaaactctccagaagctccga-agtt 24389172  T
Q  116 gccttcctcttgaactgctccagttctgaacgagaaattatgaatgag 163  Q
    |||||||||||||||||   ||||||||||||||||||||| ||||||    
T  24389173 gccttcctcttgaactgtcacagttctgaacgagaaattataaatgag 24389220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 18 - 93
Target Start/End: Original strand, 25233373 - 25233447
Alignment:
Q  18 ttagttacacatggtaactaaagacaagatacaaaaagataaaaacataccctagaaaagataggagaagatagaa 93  Q
    ||||||||||||||||||||||  |||  |||  |||||||||||||||||||||||||   ||||||||||||||    
T  25233373 ttagttacacatggtaactaaaagcaaattac-taaagataaaaacataccctagaaaatcaaggagaagatagaa 25233447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 92
Target Start/End: Original strand, 17510262 - 17510335
Alignment:
Q  18 ttagttacacatggtaactaaagacaagatacaaaaagataaaaacataccctagaaaagataggagaagataga 92  Q
    ||||||||| |||||||||||| ||||  ||| ||| ||||||||||||||||||||||   |||||||||||||    
T  17510262 ttagttacatatggtaactaaaaacaaattactaaa-gataaaaacataccctagaaaatcaaggagaagataga 17510335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 117 - 195
Target Start/End: Complemental strand, 24381945 - 24381868
Alignment:
Q  117 ccttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaaggcggtatttacagggaaagtttccacct 195  Q
    |||||||||| ||||| ||||||||| |||||||||| |||||||| ||| ||  |||||  |||||||||||||||||    
T  24381945 ccttcctctttaactgttccagttctaaacgagaaataatgaatgaagaatgcaatatttt-agggaaagtttccacct 24381868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 119 - 169
Target Start/End: Complemental strand, 24388981 - 24388931
Alignment:
Q  119 ttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaaggc 169  Q
    |||||||||||||||  ||||||||||||||||||| |||| |||||||||    
T  24388981 ttcctcttgaactgccacagttctgaacgagaaattctgaacgaggaaggc 24388931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 17 - 90
Target Start/End: Complemental strand, 13314025 - 13313953
Alignment:
Q  17 attagttacacatggtaactaaagacaagatacaaaaagataaaaacataccctagaaaagataggagaagata 90  Q
    ||||||||||||||||||||||| ||||  |||  |||||||||| ||||||||||||||   |||||||||||    
T  13314025 attagttacacatggtaactaaaaacaaattac-taaagataaaatcataccctagaaaatcaaggagaagata 13313953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 156 - 197
Target Start/End: Complemental strand, 24380992 - 24380951
Alignment:
Q  156 tgaatgaggaaggcggtatttacagggaaagtttccacctaa 197  Q
    |||| ||||||||||||||||| |||||||||||||||||||    
T  24380992 tgaacgaggaaggcggtatttatagggaaagtttccacctaa 24380951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 75
Target Start/End: Complemental strand, 24722698 - 24722642
Alignment:
Q  18 ttagttacacatggtaactaaagacaagatacaaaaagataaaaacataccctagaaa 75  Q
    |||||||||||||||||||||| ||||  ||| ||| |||||||||||||||||||||    
T  24722698 ttagttacacatggtaactaaaaacaaattactaaa-gataaaaacataccctagaaa 24722642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 116 - 169
Target Start/End: Original strand, 27660498 - 27660551
Alignment:
Q  116 gccttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaaggc 169  Q
    ||||||||||||||||    ||||||||||||||||||| ||||||||||||||    
T  27660498 gccttcctcttgaactatcacagttctgaacgagaaattctgaatgaggaaggc 27660551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 117 - 195
Target Start/End: Original strand, 17997683 - 17997762
Alignment:
Q  117 ccttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaaggc-ggtatttacagggaaagtttccacct 195  Q
    ||||||||||||  |||| | ||||||||| | |||||||||||||||||||| |||||||| || || |||||| ||||    
T  17997683 ccttcctcttgatttgctaccgttctgaacaataaattatgaatgaggaaggctggtatttatagtgagagtttctacct 17997762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 116 - 167
Target Start/End: Complemental strand, 23890273 - 23890222
Alignment:
Q  116 gccttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaag 167  Q
    ||||||||||||||||||  || ||||||||||| |||| ||||||||||||    
T  23890273 gccttcctcttgaactgccacaattctgaacgagcaattttgaatgaggaag 23890222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 18 - 89
Target Start/End: Complemental strand, 29381388 - 29381318
Alignment:
Q  18 ttagttacacatggtaactaaagacaagatacaaaaagataaaaacataccctagaaaagataggagaagat 89  Q
    |||||||||||||||||||||| ||||  |||  |||||||| ||||||||||||||||   ||||||||||    
T  29381388 ttagttacacatggtaactaaaaacaaattac-taaagataataacataccctagaaaaccaaggagaagat 29381318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 18 - 76
Target Start/End: Original strand, 17997585 - 17997642
Alignment:
Q  18 ttagttacacatggtaactaaagacaagatacaaaaagataaaaacataccctagaaaa 76  Q
    |||||||||||||||||||||| |||| ||    |||||||||||||||||||||||||    
T  17997585 ttagttacacatggtaactaaaaacaa-attagtaaagataaaaacataccctagaaaa 17997642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 123 - 169
Target Start/End: Original strand, 20399771 - 20399817
Alignment:
Q  123 tcttgaactgctccagttctgaacgagaaattatgaatgaggaaggc 169  Q
    |||||||||||| ||||||||||||||||||| || |||| ||||||    
T  20399771 tcttgaactgctacagttctgaacgagaaattctgtatgacgaaggc 20399817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 116 - 166
Target Start/End: Complemental strand, 29761644 - 29761594
Alignment:
Q  116 gccttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaa 166  Q
    ||||||||||||||||| | ||||| ||||| ||||||| |||||||||||    
T  29761644 gccttcctcttgaactggttcagttttgaacaagaaattctgaatgaggaa 29761594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 124 - 196
Target Start/End: Original strand, 18570026 - 18570099
Alignment:
Q  124 cttgaactgctccagttctgaacgagaaattatgaatgaggaagg-cggtatttacagggaaagtttccaccta 196  Q
    ||||||||| ||||||||| ||||||||||| ||||||| |||||  |||||||| || || |||||| |||||    
T  18570026 cttgaactggtccagttctaaacgagaaattctgaatgatgaaggttggtatttatagtgagagtttctaccta 18570099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 340 - 385
Target Start/End: Complemental strand, 24380697 - 24380652
Alignment:
Q  340 gtgttttcttcaatgtaagatgtctaggaacttgggaacataattc 385  Q
    |||||| |||| |||||||||||||  |||||||||||||||||||    
T  24380697 gtgtttgcttctatgtaagatgtctttgaacttgggaacataattc 24380652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 340 - 385
Target Start/End: Complemental strand, 24381670 - 24381625
Alignment:
Q  340 gtgttttcttcaatgtaagatgtctaggaacttgggaacataattc 385  Q
    ||||||||||  ||||||||||||| |||||||||||||| |||||    
T  24381670 gtgttttcttatatgtaagatgtcttggaacttgggaacaaaattc 24381625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 52 - 93
Target Start/End: Original strand, 25227170 - 25227211
Alignment:
Q  52 aaagataaaaacataccctagaaaagataggagaagatagaa 93  Q
    |||||||||||||||||||||||||   ||||||||||||||    
T  25227170 aaagataaaaacataccctagaaaatcaaggagaagatagaa 25227211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 302 - 379
Target Start/End: Complemental strand, 30118038 - 30117961
Alignment:
Q  302 attcagtgctgaaatgcctgtcttcttcgctcgtttttgtgttttcttcaatgtaagatgtctaggaacttgggaaca 379  Q
    |||| ||||| |||||||||| ||||| ||   |||  |||||| |||||||||||||||||| |||||||| |||||    
T  30118038 attctgtgctaaaatgcctgttttctttgcctttttaggtgtttgcttcaatgtaagatgtcttggaacttgagaaca 30117961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 340 - 384
Target Start/End: Original strand, 2638472 - 2638516
Alignment:
Q  340 gtgttttcttcaatgtaagatgtctaggaacttgggaacataatt 384  Q
    ||||||||||||||||||||||| | |||||||| ||||| ||||    
T  2638472 gtgttttcttcaatgtaagatgtattggaacttgagaacagaatt 2638516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 162; Significance: 2e-86; HSPs: 58)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 18 - 223
Target Start/End: Complemental strand, 15527576 - 15527371
Alignment:
Q  18 ttagttacacatggtaactaaagacaagatacaaaaagataaaaacataccctagaaaagataggagaagatagaactcctcctagtctcctagaatcgc 117  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |   ||||||||||| |    
T  15527576 ttagttatacatggtaactaaagacaagatacaaaaagataaaaacataccctagaaaagataggagaagatagaactcctcatttgctcctagaatcac 15527477  T
Q  118 cttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaaggcggtatttacagggaaagtttccacctaacttagggtaaaagtatgggt 217  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| || ||||||||||| |    
T  15527476 cttcctcttgaactgctctagttctgaacgagaaattatgaatgaggaaggcggtatttatagggaaagtttccacctaacttgggctaaaagtatggat 15527377  T
Q  218 tttcca 223  Q
    ||||||    
T  15527376 tttcca 15527371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 38 - 162
Target Start/End: Original strand, 33191764 - 33191888
Alignment:
Q  38 aagacaagatacaaaaagataaaaacataccctagaaaagataggagaagatagaactcctcctagtctcctagaatcgccttcctcttgaactgctcca 137  Q
    ||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  33191764 aagacaaaatacaaaaagataaaaacataccctataaaagataggagaagatagaactcctccttgtcgcctagaatcgccttcctcttgaactgctcca 33191863  T
Q  138 gttctgaacgagaaattatgaatga 162  Q
    |||||||||||||||||||||||||    
T  33191864 gttctgaacgagaaattatgaatga 33191888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 17 - 197
Target Start/End: Complemental strand, 15812182 - 15812001
Alignment:
Q  17 attagttacacat-ggtaactaaagacaagatacaaaaagataaaaacataccctagaaaagataggagaagatagaactcctcctagtctcctagaatc 115  Q
    |||||||||| || |||||||||||| |||||||||||||||||||||||| ||| |||||| ||||| ||||||||||| |||||   |||||||||||    
T  15812182 attagttacaaattggtaactaaagataagatacaaaaagataaaaacatatccttgaaaaggtaggaaaagatagaacttctccttaactcctagaatc 15812083  T
Q  116 gccttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaaggcggtatttacagggaaagtttccacctaa 197  Q
    ||||||||||| || ||||| |||||||||||| ||||||| |||| |||| ||||||||||  ||||||||||||||||||    
T  15812082 gccttcctcttaaattgctctagttctgaacgataaattatcaatgtggaatgcggtatttatggggaaagtttccacctaa 15812001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 18 - 209
Target Start/End: Original strand, 44796444 - 44796625
Alignment:
Q  18 ttagttacacatggtaactaaagacaagatacaaaaagataaaaacataccctagaaaagataggagaagatagaactcctcctagtctcctagaatcgc 117  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||          |||||||| | |||||| ||||||    
T  44796444 ttagttacacatggtaaccaaagacaagatacaaaaagataaaaacatacc-tagaaaagatagga----------ctcctccttggctcctacaatcgc 44796532  T
Q  118 c-ttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaaggcggtatttacagggaaagtttccacctaacttagggtaaaa 209  Q
    | |||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||| ||||||||| ||||| |||||| || |||||    
T  44796533 ccttcctcttgaactgctccagttatgaatgagaaattatgaatgaggaaggcggtatttatagggaaagtctccacttaacttgggctaaaa 44796625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 38 - 200
Target Start/End: Complemental strand, 15572450 - 15572288
Alignment:
Q  38 aagacaagatacaaaaagataaaaacataccctagaaaagataggagaagatagaactcctcctagtctcctagaatcgccttcctcttgaactgctcca 137  Q
    ||||||| ||||||||| |||||||||||||||| |||||||||||||||||| |||||||||| | |||||||||||||||||||||||||||||||||    
T  15572450 aagacaaaatacaaaaaaataaaaacataccctaaaaaagataggagaagatataactcctccttggctcctagaatcgccttcctcttgaactgctcca 15572351  T
Q  138 gttctgaacgagaaattatgaatgaggaaggcggtatttacagggaaagtttccacctaactt 200  Q
     |||| ||| || |||| |||||||||||||| ||||||| ||| |||  || ||||||||||    
T  15572350 attctaaacaaggaattttgaatgaggaaggcagtatttataggaaaaaatttcacctaactt 15572288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 73 - 199
Target Start/End: Complemental strand, 23035629 - 23035503
Alignment:
Q  73 aaaagataggagaagatagaactcctcctagtctcctagaatcgccttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaaggcggt 172  Q
    |||||||| |||||||||||||||||| | | |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  23035629 aaaagatatgagaagatagaactcctctttggctcctaaaatcgccttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaaggcagt 23035530  T
Q  173 atttacagggaaagtttccacctaact 199  Q
    ||||| ||| |||||| ||||||||||    
T  23035529 atttataggaaaagttcccacctaact 23035503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 40 - 189
Target Start/End: Complemental strand, 25960199 - 25960051
Alignment:
Q  40 gacaagatacaaaaagataaaaacataccctagaaaagataggagaagatagaactcctcctagtctcctagaatcgccttcctcttgaactgctccagt 139  Q
    ||||| |||||||  |||||||||||| |||||||||||||||||||||||||||||||||| | ||||||||||| |||||| |||| ||| |||||||    
T  25960199 gacaaaatacaaatggataaaaacatatcctagaaaagataggagaagatagaactcctccttggctcctagaatctccttccccttg-actactccagt 25960101  T
Q  140 tctgaacgagaaattatgaatgaggaaggcggtatttacagggaaagttt 189  Q
    |||||||||||||||||||| ||||||  ||||||||| |||||||||||    
T  25960100 tctgaacgagaaattatgaaagaggaattcggtatttatagggaaagttt 25960051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 19 - 221
Target Start/End: Original strand, 16112856 - 16113057
Alignment:
Q  19 tagttacacatggtaactaaagacaagatacaaaaagataaaaacataccctagaaaagataggagaagatagaactcctcctagtctcctagaatcgcc 118  Q
    |||||||||||| ||||||| ||||| | |||||||||| | ||||||| ||| |||||||| ||||||||||| |||||||| | || |||||||||||    
T  16112856 tagttacacatgataactaa-gacaaaaaacaaaaagatgacaacatactctaaaaaagatatgagaagatagagctcctccttggcttctagaatcgcc 16112954  T
Q  119 ttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaaggcggtatttacagggaaagtttccacctaacttagggtaaaagtatgggtt 218  Q
    ||||||||||| || || |||||  || |||||||| |||||||  |||||| |||||| |||||||||||||||||||||| || ||||| |||||| |    
T  16112955 ttcctcttgaagtgttctagttcgtaatgagaaattgtgaatgataaaggcgatatttatagggaaagtttccacctaacttgggctaaaattatgggct 16113054  T
Q  219 ttc 221  Q
    |||    
T  16113055 ttc 16113057  T

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Target: chr1; HSP #9
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 32 - 232
Target Start/End: Complemental strand, 26648071 - 26647881
Alignment:
Q  32 taactaaagacaagatacaaaaagataaaaacataccctagaaaagataggagaagatagaactcctcctagtctcctagaatcgccttcctcttgaact 131  Q
    ||||||||||||||||||||||||||||||| ||||| ||    |||      ||||||||||||||||| | || ||||||| | ||||||||||||||    
T  26648071 taactaaagacaagatacaaaaagataaaaatataccata----aga------aagatagaactcctccttggcttctagaattgtcttcctcttgaact 26647982  T
Q  132 gctccagttctgaacgagaaattatgaatgaggaaggcggtatttacagggaaagtttccacctaacttagggtaaaagtatgggttttccaggggtgaa 231  Q
    ||||||||| |||||||||| |||||||||||||||||| |||||| |||||||||||||| || |||| || ||||  |||||| |||| |||||||||    
T  26647981 gctccagttttgaacgagaagttatgaatgaggaaggcgatatttatagggaaagtttccatctgactttggctaaacatatgggctttctaggggtgaa 26647882  T

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Target: chr1; HSP #10
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 19 - 198
Target Start/End: Original strand, 24282349 - 24282520
Alignment:
Q  19 tagttacacatggtaactaaagacaagatacaaaaagataaaaacataccctagaaaagataggagaagatagaactcctcctagtctcctagaatcgcc 118  Q
    |||||||||||| ||||||| ||| | |||||||| |||||||||||| ||||||||||||| ||||||||| |||||||||| | ||| |||||||||     
T  24282349 tagttacacatgataactaa-gactaaatacaaaaggataaaaacatatcctagaaaagatatgagaagatataactcctccttggctcatagaatcgct 24282447  T
Q  119 ttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaaggcggtatttacagggaaagtttccacctaac 198  Q
    ||||| ||||||||||||||||||||||| |||| | |||||||       |||||||| ||||||||||||||||||||    
T  24282448 ttcctattgaactgctccagttctgaacgtgaaactgtgaatga-------ggtatttatagggaaagtttccacctaac 24282520  T

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Target: chr1; HSP #11
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 18 - 195
Target Start/End: Complemental strand, 12011894 - 12011713
Alignment:
Q  18 ttagttacacatggtaactaaagacaagatacaaaaagataaaaacataccctagaaaagataggagaagatagaa---ctcctcct-agtctcctagaa 113  Q
    ||||||||||||||||||||||||| |  ||| |||||||| |||||||||| ||||||   |||| |||||||||   |||||||  |  ||||| |||    
T  12011894 ttagttacacatggtaactaaagacgaattactaaaagatataaacataccccagaaaaacaaggaaaagatagaaaaactcctccggaagctcctggaa 12011795  T
Q  114 tcgccttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaaggcggtatttacagggaaagtttccacct 195  Q
    |||||||||||||||||||||||||||| ||| ||||||||| ||||||||||||| | ||||| ||||| |||||||||||    
T  12011794 tcgccttcctcttgaactgctccagttcggaatgagaaattacgaatgaggaaggcagaatttatagggagagtttccacct 12011713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 21 - 193
Target Start/End: Complemental strand, 17120571 - 17120396
Alignment:
Q  21 gttacacatggtaactaaagacaagatacaaaaagataaaaacataccctagaaaagataggagaagatagaa---ctcctcct-agtctcctagaatcg 116  Q
    ||||||||||||||||||||| ||  ||  ||||||||||| |||||| |||||||   ||||||||||||||   |||||||| |  ||||||||||||    
T  17120571 gttacacatggtaactaaagaaaaattaacaaaagataaaa-cataccttagaaaaacaaggagaagatagaaaaactcctcctgaagctcctagaatcg 17120473  T
Q  117 ccttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaaggcggtatttacagggaaagtttccac 193  Q
     ||||||||||||||||||||||||||| |||||||||||||||||| ||||| ||||||| | ||| |||||||||    
T  17120472 tcttcctcttgaactgctccagttctgatcgagaaattatgaatgagcaaggcagtatttataaggagagtttccac 17120396  T

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Target: chr1; HSP #13
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 278 - 391
Target Start/End: Original strand, 44796808 - 44796921
Alignment:
Q  278 aagctcccaggcgcttcagtgtaaattcagtgctgaaatgcctgtcttcttcgctcgtttttgtgttttcttcaatgtaagatgtctaggaacttgggaa 377  Q
    |||| ||||||||||||||||||||||||||||| |||||| ||| |||||||| | |||| |||||||||||||| |||||||||| ||||||||||||    
T  44796808 aagcgcccaggcgcttcagtgtaaattcagtgcttaaatgcatgttttcttcgcccattttggtgttttcttcaatataagatgtcttggaacttgggaa 44796907  T
Q  378 cataattcgtccct 391  Q
    |||||||| |||||    
T  44796908 cataattcctccct 44796921  T

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Target: chr1; HSP #14
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 19 - 172
Target Start/End: Complemental strand, 9786989 - 9786835
Alignment:
Q  19 tagttacacatggtaactaaagacaaga-tacaaaaagataaaaacataccctagaaaagataggagaagatagaactcctcctagtct-cctagaatcg 116  Q
    |||||||||||| ||||||| ||||| | ||| |||||||||||||| |||||| | |||||||||||||||| |||||||||| | || ||||||||||    
T  9786989 tagttacacatgataactaa-gacaaaaatactaaaagataaaaacaaaccctatagaagataggagaagatataactcctccttggcttcctagaatcg 9786891  T
Q  117 ccttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaaggcggt 172  Q
     ||||||||||| ||||| ||||||||||| ||||||| |||||||| ||||||||    
T  9786890 tcttcctcttgagctgcttcagttctgaacaagaaattgtgaatgagaaaggcggt 9786835  T

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Target: chr1; HSP #15
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 18 - 195
Target Start/End: Complemental strand, 27116878 - 27116697
Alignment:
Q  18 ttagttacacatggtaactaaagacaagatacaaaaagataaaaacataccctagaaaagataggagaagatag---aactcctcc-tagtctcctagaa 113  Q
    |||||||||||||||||||||||||||  | ||||||||||||||| || |||||||||   ||||||||||||   |||||||||  |  |||||| ||    
T  27116878 ttagttacacatggtaactaaagacaaatttcaaaaagataaaaacttagcctagaaaaacaaggagaagatagaaaaactcctccggaagctcctaaaa 27116779  T
Q  114 tcgccttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaaggcggtatttacagggaaagtttccacct 195  Q
    |||||||| | ||||||| ||| |||||||||||||||||| |||||||| || |||||| ||| ||||| | |||||||||    
T  27116778 tcgccttcattttgaactactctagttctgaacgagaaattctgaatgagaaatgcggtacttatagggataatttccacct 27116697  T

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Target: chr1; HSP #16
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 285 - 391
Target Start/End: Complemental strand, 15527195 - 15527089
Alignment:
Q  285 caggcgcttcagtgtaaattcagtgctgaaatgcctgtcttcttcgctcgtttttgtgttttcttcaatgtaagatgtctaggaacttgggaacataatt 384  Q
    |||| |||||||||||||||||||||||||  |||| |||||||||| |||||| |||||||||||||||||| ||| || |||||||||||||||||||    
T  15527195 caggagcttcagtgtaaattcagtgctgaatcgcctctcttcttcgcccgttttggtgttttcttcaatgtaaaatgacttggaacttgggaacataatt 15527096  T
Q  385 cgtccct 391  Q
    | |||||    
T  15527095 cctccct 15527089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 269 - 385
Target Start/End: Complemental strand, 15811860 - 15811744
Alignment:
Q  269 gcttttctgaagctcccaggcgcttcagtgtaaattcagtgctgaaatgcctgtcttcttcgctcgtttttgtgttttcttcaatgtaagatgtctagga 368  Q
    ||||||||||||| |||| |||||||||||||||||||| | ||||||||||||||| ||     ||||| |||||| |||||||||||||||||| |||    
T  15811860 gcttttctgaagcgcccatgcgcttcagtgtaaattcagggttgaaatgcctgtcttatttttctgttttggtgtttccttcaatgtaagatgtcttgga 15811761  T
Q  369 acttgggaacataattc 385  Q
    |||||||||||||||||    
T  15811760 acttgggaacataattc 15811744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 18 - 89
Target Start/End: Complemental strand, 23035719 - 23035648
Alignment:
Q  18 ttagttacacatggtaactaaagacaagatacaaaaagataaaaacataccctagaaaagataggagaagat 89  Q
    ||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||    
T  23035719 ttagttacacatggtaactaaagacaacatacaaaaatataaaaacataccctagaaaagataggagaagat 23035648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 263 - 385
Target Start/End: Complemental strand, 23035340 - 23035218
Alignment:
Q  263 ccaggcgcttttctgaagctcccaggcgcttcagtgtaaattcagtgctgaaatgcctgtcttcttcgctcgtttttgtgttttcttcaatgtaagatgt 362  Q
    |||||| ||||||||| || || |||||||| ||||| | | ||||||  ||| |||| |||||||||| |||||| |||||||||||||||||||||||    
T  23035340 ccaggcacttttctgatgcgcctaggcgctttagtgttattccagtgcgaaaacgcctttcttcttcgcccgttttggtgttttcttcaatgtaagatgt 23035241  T
Q  363 ctaggaacttgggaacataattc 385  Q
    || ||||||||||||||||||||    
T  23035240 cttggaacttgggaacataattc 23035218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 112 - 209
Target Start/End: Complemental strand, 18100421 - 18100324
Alignment:
Q  112 aatcgccttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaaggcggtatttacagggaaagtttccacctaacttagggtaaaa 209  Q
    |||||||||||||||||||| ||| |||||||||||||||||| |||||||||||||  ||||||| ||| |||||||||||||||||| || |||||    
T  18100421 aatcgccttcctcttgaactactcaagttctgaacgagaaattttgaatgaggaaggttgtatttataggaaaagtttccacctaacttgggctaaaa 18100324  T

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Target: chr1; HSP #21
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 19 - 129
Target Start/End: Original strand, 22665507 - 22665618
Alignment:
Q  19 tagttacacatggtaactaaagacaaga-tacaaaaagataaaaacataccctagaaaagataggagaagatagaactcctcctagtc-tcctagaatcg 116  Q
    |||||||||||| ||||||| ||||| | ||| ||||||||||||||||||||||||||||||||| ||||||||||||||||| | | ||||| |||||    
T  22665507 tagttacacatgataactaa-gacaaaaatactaaaagataaaaacataccctagaaaagataggaaaagatagaactcctccttggcttcctataatcg 22665605  T
Q  117 ccttcctcttgaa 129  Q
    |||||||||||||    
T  22665606 ccttcctcttgaa 22665618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 118 - 193
Target Start/End: Original strand, 34482094 - 34482169
Alignment:
Q  118 cttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaaggcggtatttacagggaaagtttccac 193  Q
    ||||||||||||||||||||||||||||||||||||||| ||| || ||||||||||||| |||||||||||||||    
T  34482094 cttcctcttgaactgctccagttctgaacgagaaattataaattagaaaggcggtatttatagggaaagtttccac 34482169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 17 - 177
Target Start/End: Complemental strand, 21333793 - 21333633
Alignment:
Q  17 attagttacacatggtaactaaagacaagatacaaaaagataaaaacataccctagaaaagataggagaagatagaactcctcct-agtctcctagaatc 115  Q
    ||||||||||||||||||||||| ||||  ||| ||| ||||||| ||||||||||||||   ||||||||||| |    ||||| | ||||| | | |     
T  21333793 attagttacacatggtaactaaaaacaaattactaaa-gataaaagcataccctagaaaatcaaggagaagatatattctctcctgaatctccaa-agta 21333696  T
Q  116 gccttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaaggc-ggtattta 177  Q
    ||||||||||||||||||| ||||||||||||||||||| |||||||||||||| ||||||||    
T  21333695 gccttcctcttgaactgctacagttctgaacgagaaattctgaatgaggaaggctggtattta 21333633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 18 - 166
Target Start/End: Original strand, 26021778 - 26021930
Alignment:
Q  18 ttagttacacatggtaactaaagacaagatacaaaaagataaaaacataccctagaaaagataggagaagatagaa---ctcctcct-agtctcctagaa 113  Q
    ||||||||||||||||||||||||||| ||    ||||||||||||||| | |||||||   ||| ||||||||||   |||||||| |  |||||||||    
T  26021778 ttagttacacatggtaactaaagacaaaattactaaagataaaaacatatcttagaaaaacaaggggaagatagaaaaactcctcctgaagctcctagaa 26021877  T
Q  114 tcgccttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaa 166  Q
    | |||||||||||||||||||| | || ||||||||||| | |||||||||||    
T  26021878 ttgccttcctcttgaactgctctaattttgaacgagaaaatgtgaatgaggaa 26021930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 54 - 167
Target Start/End: Complemental strand, 51470112 - 51469998
Alignment:
Q  54 agataaaaacataccctagaaaagataggagaagatagaa-ctcctcctagtctcctagaatcgccttcctcttgaactgctccagttctgaacgagaaa 152  Q
    |||||||||||||||||||||||   |||||||||||||| ||||||  |  || ||||||| ||||||||||||| ||||| ||||| |||||||||||    
T  51470112 agataaaaacataccctagaaaaacaaggagaagatagaaactcctctgaagcttctagaattgccttcctcttgagctgcttcagttatgaacgagaaa 51470013  T
Q  153 ttatgaatgaggaag 167  Q
    || ||||||||||||    
T  51470012 ttctgaatgaggaag 51469998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 18 - 195
Target Start/End: Complemental strand, 18735280 - 18735103
Alignment:
Q  18 ttagttacacatggtaactaaagacaagatacaaaaagataaaaacataccctagaaaagataggagaagatagaactcctcct-agtctcctagaatcg 116  Q
    |||||||||||||||||||||| ||||  ||| ||| |||||||||| ||||||||||||  ||||||||||||||   ||||| |  || | | | ||     
T  18735280 ttagttacacatggtaactaaaaacaaattactaaa-gataaaaacaaaccctagaaaagcaaggagaagatagaaactctcctgaagcttc-aaagtca 18735183  T
Q  117 ccttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaaggc-ggtatttacagggaaagtttccacct 195  Q
    ||||||||||| |||||  ||||||||||||||||||| | |||||||||||| |||||||| || || |||||| ||||    
T  18735182 ccttcctcttgcactgcaacagttctgaacgagaaattctaaatgaggaaggctggtatttatagtgagagtttctacct 18735103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 18 - 171
Target Start/End: Original strand, 18831543 - 18831694
Alignment:
Q  18 ttagttacacatggtaactaaagacaagatacaaaaagataaaaacataccctagaaaagataggagaagatag-aactcctcctagtctcctagaatcg 116  Q
    |||||||||||||||||||||| | || ||||  |||||||||||||||||||||||||   |||||||||||| |||||  || |  |||| | | ||     
T  18831543 ttagttacacatggtaactaaa-aaaaaatac-taaagataaaaacataccctagaaaatcaaggagaagatagaaactctcccgaagctcc-aaagtct 18831639  T
Q  117 ccttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaaggcgg 171  Q
    |||| ||||||||||||   |||||||||||||||||||||||| ||||||||||    
T  18831640 cctttctcttgaactgccatagttctgaacgagaaattatgaattaggaaggcgg 18831694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 108 - 169
Target Start/End: Original strand, 13267299 - 13267360
Alignment:
Q  108 ctagaatcgccttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaaggc 169  Q
    ||||||| ||||||||||||||||||  ||||| ||||||||||||||||||||||||||||    
T  13267299 ctagaattgccttcctcttgaactgccacagttttgaacgagaaattatgaatgaggaaggc 13267360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 122 - 195
Target Start/End: Complemental strand, 16786697 - 16786624
Alignment:
Q  122 ctcttgaactgctccagttctgaacgagaaattatgaatgaggaaggcggtatttacagggaaagtttccacct 195  Q
    ||||| ||||||||||||||||||||||||||| ||||| ||||| |||||||||| ||||| ||||| |||||    
T  16786697 ctctttaactgctccagttctgaacgagaaattgtgaataaggaatgcggtatttatagggagagttttcacct 16786624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 292 - 385
Target Start/End: Original strand, 35133589 - 35133682
Alignment:
Q  292 ttcagtgtaaattcagtgctgaaatgcctgtcttcttcgctcgtttttgtgttttcttcaatgtaagatgtctaggaacttgggaacataattc 385  Q
    |||||||||||| || |  |||||| ||| | |||||||  |||||| ||| ||||||||||||||||||||| ||||||||||||||||||||    
T  35133589 ttcagtgtaaatccaattatgaaataccttttttcttcgtccgttttggtgctttcttcaatgtaagatgtcttggaacttgggaacataattc 35133682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 18 - 168
Target Start/End: Original strand, 27545753 - 27545903
Alignment:
Q  18 ttagttacacatggtaactaaagacaagatacaaaaagat-aaaaacataccctagaaaagataggagaagatagaactcctcct-agtctcctagaatc 115  Q
    |||||||||||||||||||||| |||||||||  |||||| |||||||||||||||||||   ||||||||||||||    || | |  |||| | | |     
T  27545753 ttagttacacatggtaactaaaaacaagatac-taaagataaaaaacataccctagaaaatcaaggagaagatagaaactttcttgaagctcc-aaagtt 27545850  T
Q  116 gccttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaagg 168  Q
    ||||||||||||||||||| ||||||||||| ||||||| |||||||| ||||    
T  27545851 gccttcctcttgaactgcttcagttctgaacaagaaattctgaatgagaaagg 27545903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 17 - 167
Target Start/End: Original strand, 12209642 - 12209791
Alignment:
Q  17 attagttacacatggtaactaaagacaagatacaaaaagataaaaacataccctagaaaagataggagaagatagaa-ctcctcctagtctcctagaatc 115  Q
    ||||||||| ||||||||||||| ||||  ||| ||| ||||||||||||| || |||||   |||||||||||||| ||| ||| |  ||| || |||     
T  12209642 attagttacccatggtaactaaaaacaaattactaaa-gataaaaacatactctggaaaatcaaggagaagatagaaactcatccgaagctc-taaaatt 12209739  T
Q  116 gccttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaag 167  Q
    ||||||||||| ||||||  ||||||| ||||||||||| ||||||||||||    
T  12209740 gccttcctcttaaactgccacagttctaaacgagaaattctgaatgaggaag 12209791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 18 - 168
Target Start/End: Original strand, 18826725 - 18826874
Alignment:
Q  18 ttagttacacatggtaactaaagacaagatacaaaaagataaaaacataccctagaaaagataggagaagatagaa-ctcctcctagtctcctagaatcg 116  Q
    ||||||||||||| |||||| | ||||  ||| ||| |||||||||||||||||||||    |||||||||||||| |||  || |  |||| | | |||    
T  18826725 ttagttacacatgataactagaaacaaattactaaa-gataaaaacataccctagaaattcaaggagaagatagaaactctcccgaagctccaa-agtcg 18826822  T
Q  117 ccttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaagg 168  Q
    |||||||||||||||||  || |||||||||||||||| |||||||||||||    
T  18826823 ccttcctcttgaactgccacatttctgaacgagaaattctgaatgaggaagg 18826874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 18 - 169
Target Start/End: Original strand, 28009179 - 28009328
Alignment:
Q  18 ttagttacacatggtaactaaagacaagatacaaaaagataaaaacataccctagaaaagataggagaagatagaa-ctcctcct-agtctcctagaatc 115  Q
    |||||||||||||||| ||||| | ||  ||| ||| |||||||||||||||||||||| | ||   ||||||||| |||||||  |  |||||| |||     
T  28009179 ttagttacacatggtagctaaaaataaattactaaa-gataaaaacataccctagaaaaaaaag---aagatagaaactcctccggaagctcctataatt 28009274  T
Q  116 gccttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaaggc 169  Q
    ||||||||||||||||||| | |||||||| | |||||||||||||| ||||||    
T  28009275 gccttcctcttgaactgcttccgttctgaaagtgaaattatgaatgaagaaggc 28009328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 190
Target Start/End: Original strand, 20107205 - 20107377
Alignment:
Q  18 ttagttacacatggtaactaaagacaagatacaaaaagataaaaacataccctagaaaagataggagaagatagaactcctcct-agtctcctagaatcg 116  Q
    |||||||||||||||||||||| ||||  ||| | | ||||||||||||||||||||||   ||||||||||||||   ||||| |  |||| | || ||    
T  20107205 ttagttacacatggtaactaaaaacaaattactaca-gataaaaacataccctagaaaatcaaggagaagatagaaactctcctgaagctcc-aaaaccg 20107302  T
Q  117 ccttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaaggc-ggtatttacagggaaagtttc 190  Q
     |||||||||||  || |  |||||||||||||||||| |||||||||||||| |||||||| || || ||||||    
T  20107303 tcttcctcttgagttgttatagttctgaacgagaaattctgaatgaggaaggctggtatttatagtgagagtttc 20107377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 167
Target Start/End: Complemental strand, 26612081 - 26611933
Alignment:
Q  18 ttagttacacatggtaactaaagacaagatacaaaaagataaaaacataccctagaaaagataggagaagatagaa-ctcctcctagtctcctagaatcg 116  Q
    ||||||| |||||||||||||| ||||  ||| ||| ||||||||||||||||||||||   | |||||||||||| |||  || |  |||| | | ||     
T  26612081 ttagttaaacatggtaactaaaaacaaattactaaa-gataaaaacataccctagaaaatcaaagagaagatagaaactctcccgaagctccaa-agtct 26611984  T
Q  117 ccttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaag 167  Q
    ||||||||||||||| || ||||| ||||||||||||| ||||||||||||    
T  26611983 ccttcctcttgaacttctacagttttgaacgagaaattctgaatgaggaag 26611933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 286 - 391
Target Start/End: Complemental strand, 26647754 - 26647649
Alignment:
Q  286 aggcgcttcagtgtaaattcagtgctgaaatgcctgtcttcttcgctcgtttttgtgttttcttcaatgtaagatgtctaggaacttgggaacataattc 385  Q
    |||||||||| |||||||| |||| ||||||||||   |||||||| | |||| | |||||||| |||||||||||| | ||||| |||||||| |||||    
T  26647754 aggcgcttcactgtaaatttagtgttgaaatgccttatttcttcgccccttttggcgttttctttaatgtaagatgtgttggaacatgggaacaaaattc 26647655  T
Q  386 gtccct 391  Q
     |||||    
T  26647654 ctccct 26647649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 20 - 168
Target Start/End: Original strand, 27972922 - 27973070
Alignment:
Q  20 agttacacatggtaactaaagacaagatacaaaaagataaaaacataccctagaaaagataggagaagatagaa-ctcctcctagtctcctagaatcgcc 118  Q
    ||||||| |||||||||||| ||||  ||| ||| ||||||||||||||||| ||||   ||| |||||||||| ||||||| |     ||||||| |||    
T  27972922 agttacatatggtaactaaaaacaaattactaaa-gataaaaacataccctataaaaacaaggcgaagatagaaactcctccgaaagctctagaattgcc 27973020  T
Q  119 ttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaagg 168  Q
    ||| | |||||||||| ||||| ||||||||||||| |||| ||||||||    
T  27973021 ttctttttgaactgctacagttttgaacgagaaattctgaacgaggaagg 27973070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 19 - 81
Target Start/End: Original strand, 16360874 - 16360933
Alignment:
Q  19 tagttacacatggtaactaaagacaagatacaaaaagataaaaacataccctagaaaagatag 81  Q
    |||||||||||||||||||||||||| ||||||||||||   |||||||| ||||||||||||    
T  16360874 tagttacacatggtaactaaagacaaaatacaaaaagat---aacataccatagaaaagatag 16360933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 18 - 168
Target Start/End: Original strand, 24055046 - 24055195
Alignment:
Q  18 ttagttacacatggtaactaaagacaagatacaaaaagataaaaacataccctagaaaagataggagaagatagaactcct-cctagtctcctagaatcg 116  Q
    |||||||||||||||||||||| ||||  ||| ||| ||||||||||||||||||||||   |||| || |||||| | || || |  |||| | | |||    
T  24055046 ttagttacacatggtaactaaaaacaaattactaaa-gataaaaacataccctagaaaatcaaggaaaatatagaaattctcccgaagctcc-aaagtcg 24055143  T
Q  117 ccttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaagg 168  Q
    |||||||||||||||||  || |||| ||||||||||| ||||| |||||||    
T  24055144 ccttcctcttgaactgccacaattctaaacgagaaattctgaatcaggaagg 24055195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 18 - 167
Target Start/End: Complemental strand, 15159545 - 15159397
Alignment:
Q  18 ttagttacacatggtaactaaagacaagatacaaaaagataaaaacataccctagaaaagataggagaagata-gaactcctcctagtctcctagaatcg 116  Q
    |||||||||||||||||||||| ||||  ||| ||| ||||||||||||||||||||||   |||||||||||  |||||  |  |  |||| | | | |    
T  15159545 ttagttacacatggtaactaaaaacaaattaccaaa-gataaaaacataccctagaaaatcaaggagaagatataaactctccgcaagctcc-aaagttg 15159448  T
Q  117 ccttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaag 167  Q
    |||||||||| ||||||  ||||||||||||||||||| ||||| ||||||    
T  15159447 ccttcctcttaaactgccacagttctgaacgagaaattctgaataaggaag 15159397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 119 - 169
Target Start/End: Complemental strand, 16915890 - 16915840
Alignment:
Q  119 ttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaaggc 169  Q
    |||||| ||||||||||||||||||||||| ||||| ||||||||||||||    
T  16915890 ttcctcatgaactgctccagttctgaacgaaaaattctgaatgaggaaggc 16915840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 116 - 169
Target Start/End: Complemental strand, 21665712 - 21665659
Alignment:
Q  116 gccttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaaggc 169  Q
    ||||||||||||||||||| || || |||| |||||||||||||||||||||||    
T  21665712 gccttcctcttgaactgcttcaattttgaatgagaaattatgaatgaggaaggc 21665659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 109 - 162
Target Start/End: Original strand, 22621316 - 22621369
Alignment:
Q  109 tagaatcgccttcctcttgaactgctccagttctgaacgagaaattatgaatga 162  Q
    ||||||||||||||||| ||| ||||| |||||||||||||||||| |||||||    
T  22621316 tagaatcgccttcctctggaattgctctagttctgaacgagaaattgtgaatga 22621369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 340 - 391
Target Start/End: Complemental strand, 15572033 - 15571982
Alignment:
Q  340 gtgttttcttcaatgtaagatgtctaggaacttgggaacataattcgtccct 391  Q
    |||||||||||||||||||||||||  ||||||||||||| ||||| |||||    
T  15572033 gtgttttcttcaatgtaagatgtcttcgaacttgggaacagaattcctccct 15571982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 18 - 93
Target Start/End: Complemental strand, 25403116 - 25403042
Alignment:
Q  18 ttagttacacatggtaactaaagacaagatacaaaaagataaaaacataccctagaaaagataggagaagatagaa 93  Q
    ||||||| |||||||||||||| ||||  ||| ||| ||||||||||||||||||||||   ||||||||||||||    
T  25403116 ttagttatacatggtaactaaaaacaatttactaaa-gataaaaacataccctagaaaatcaaggagaagatagaa 25403042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 93
Target Start/End: Original strand, 9402661 - 9402734
Alignment:
Q  19 tagttacacatggtaactaaagacaagatacaaaaagataaaaacataccctagaaaagataggagaagatagaa 93  Q
    ||||||||||||||||||||| |||| ||    ||||||||||| ||||||||||||| | ||||||||||||||    
T  9402661 tagttacacatggtaactaaaaacaa-attattaaagataaaaatataccctagaaaataaaggagaagatagaa 9402734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 308 - 376
Target Start/End: Complemental strand, 18100152 - 18100084
Alignment:
Q  308 tgctgaaatgcctgtcttcttcgctcgtttttgtgttttcttcaatgtaagatgtctaggaacttggga 376  Q
    ||||||||||||||| ||||||||  |||   ||||||||||||| |||| |||||| |||||||||||    
T  18100152 tgctgaaatgcctgttttcttcgcctgttgaggtgttttcttcaaagtaaaatgtcttggaacttggga 18100084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 340 - 379
Target Start/End: Original strand, 16114553 - 16114592
Alignment:
Q  340 gtgttttcttcaatgtaagatgtctaggaacttgggaaca 379  Q
    |||||| |||||||||||||||||| ||||||||||||||    
T  16114553 gtgtttacttcaatgtaagatgtcttggaacttgggaaca 16114592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 17 - 92
Target Start/End: Complemental strand, 18528272 - 18528198
Alignment:
Q  17 attagttacacatggtaactaaagacaagatacaaaaagataaaaacataccctagaaaagataggagaagataga 92  Q
    ||||||||||||||||||||||| ||||  |||  |||||||||| |||||||||| |||   |||||||||||||    
T  18528272 attagttacacatggtaactaaaaacaaattac-taaagataaaagcataccctaggaaatcaaggagaagataga 18528198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 340 - 391
Target Start/End: Original strand, 33192104 - 33192155
Alignment:
Q  340 gtgttttcttcaatgtaagatgtctaggaacttgggaacataattcgtccct 391  Q
    ||||||||| |||||||||||||||  ||||||||||||| ||||| |||||    
T  33192104 gtgttttctacaatgtaagatgtcttagaacttgggaacagaattcctccct 33192155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 342 - 391
Target Start/End: Complemental strand, 9783322 - 9783273
Alignment:
Q  342 gttttcttcaatgtaagatgtctaggaacttgggaacataattcgtccct 391  Q
    ||||||||||| |||| |||||| |||||||||||||| ||||| |||||    
T  9783322 gttttcttcaaagtaaaatgtcttggaacttgggaacaaaattcctccct 9783273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 169
Target Start/End: Original strand, 14782010 - 14782063
Alignment:
Q  116 gccttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaaggc 169  Q
    |||||||||| |||||||   |||| ||||||||||||| ||||||||||||||    
T  14782010 gccttcctctcgaactgccatagttttgaacgagaaattttgaatgaggaaggc 14782063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 52 - 93
Target Start/End: Complemental strand, 31234967 - 31234926
Alignment:
Q  52 aaagataaaaacataccctagaaaagataggagaagatagaa 93  Q
    |||||||||||||||||||||||||   ||||||||||||||    
T  31234967 aaagataaaaacataccctagaaaatcaaggagaagatagaa 31234926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 116 - 152
Target Start/End: Original strand, 728632 - 728668
Alignment:
Q  116 gccttcctcttgaactgctccagttctgaacgagaaa 152  Q
    ||||||||||||||||||  |||||||||||||||||    
T  728632 gccttcctcttgaactgcctcagttctgaacgagaaa 728668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 52 - 92
Target Start/End: Complemental strand, 15543013 - 15542973
Alignment:
Q  52 aaagataaaaacataccctagaaaagataggagaagataga 92  Q
    |||||||||||||||||||||||||   |||||||||||||    
T  15543013 aaagataaaaacataccctagaaaatcaaggagaagataga 15542973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 18 - 70
Target Start/End: Complemental strand, 21983761 - 21983710
Alignment:
Q  18 ttagttacacatggtaactaaagacaagatacaaaaagataaaaacataccct 70  Q
    |||||||||||||||||||||| ||||  |||  |||||||||||||||||||    
T  21983761 ttagttacacatggtaactaaaaacaaattac-taaagataaaaacataccct 21983710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 343 - 391
Target Start/End: Original strand, 24282757 - 24282805
Alignment:
Q  343 ttttcttcaatgtaagatgtctaggaacttgggaacataattcgtccct 391  Q
    ||||||| |||||||||||| | | |||||||||||||||||| |||||    
T  24282757 ttttctttaatgtaagatgtattgtaacttgggaacataattcctccct 24282805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 151; Significance: 9e-80; HSPs: 35)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 151; E-Value: 9e-80
Query Start/End: Original strand, 18 - 232
Target Start/End: Original strand, 18831544 - 18831758
Alignment:
Q  18 ttagttacacatggtaactaaagacaagatacaaaaagataaaaacataccctagaaaagataggagaagatagaactcctcctagtctcctagaatcgc 117  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||    
T  18831544 ttagttacacatcgtaactaaagacaagatacaaaaagataaaaacataccctagaaaagataggagaagatagaactcctccttggctcctagaatcgc 18831643  T
Q  118 cttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaaggcggtatttacagggaaagtttccacctaacttagggtaaaagtatgggt 217  Q
    |||||||||||||||||| || ||| ||||| ||||| |||||||||||| ||||||||| | ||||||||||||||| |||| || ||||||||| |||    
T  18831644 cttcctcttgaactgctcaagatctaaacgaaaaattttgaatgaggaagacggtatttataaggaaagtttccacctgacttgggctaaaagtatcggt 18831743  T
Q  218 tttccaggggtgaaa 232  Q
    |||| ||||||||||    
T  18831744 tttctaggggtgaaa 18831758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 141; E-Value: 8e-74
Query Start/End: Original strand, 18 - 194
Target Start/End: Original strand, 18938904 - 18939080
Alignment:
Q  18 ttagttacacatggtaactaaagacaagatacaaaaagataaaaacataccctagaaaagataggagaagatagaactcctcctagtctcctagaatcgc 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| | |||||||||| ||    
T  18938904 ttagttacacatggtaactaaagacaagatacaaaaagataaaaacatatcctagaaaagataggagaagatagaactcctccttggctcctagaattgc 18939003  T
Q  118 cttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaaggcggtatttacagggaaagtttccacc 194  Q
    |||||| ||||||||||| |||||||||||||||||||||||||||||||| | |||||| ||||||||||||||||    
T  18939004 cttccttttgaactgctctagttctgaacgagaaattatgaatgaggaaggagatatttatagggaaagtttccacc 18939080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 19 - 200
Target Start/End: Complemental strand, 18514185 - 18514005
Alignment:
Q  19 tagttacacatggtaactaaagacaagatacaaaaagataaaaacataccctagaaaagataggagaagatagaactcctcctagtctcctagaatcgcc 118  Q
    |||||||||||| ||||| | ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | ||||||||||||||    
T  18514185 tagttacacatgataactca-gacaaaatacaaaaagataaaaacataccctagaaaagataggagaagatagaactgctccttggctcctagaatcgcc 18514087  T
Q  119 ttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaaggcggtatttacagggaaagtttccacctaactt 200  Q
    || ||||||||||| || |||| |||| |||||||| ||||||||||||||||||||||  | |||| ||||||||||||||    
T  18514086 tttctcttgaactgttctagttatgaatgagaaattgtgaatgaggaaggcggtatttattgtgaaattttccacctaactt 18514005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 48 - 209
Target Start/End: Complemental strand, 18206579 - 18206416
Alignment:
Q  48 acaaaaagataaaaacataccctagaaaagata-ggagaagatagaactcctcct-agtctcctagaatcgccttcctcttgaactgctccagttctgaa 145  Q
    |||||||||||||| |||||||||||||||||| |||| |||||||||||||||| |  |||||| ||||| ||||||||||||||||||||||||||||    
T  18206579 acaaaaagataaaaccataccctagaaaagataaggaggagatagaactcctcctgaagctcctaaaatcgtcttcctcttgaactgctccagttctgaa 18206480  T
Q  146 cgagaaattatgaatgaggaaggcggtatttacagggaaagtttccacctaacttagggtaaaa 209  Q
    |||||||||| ||||||||||  |  ||| || ||||||||||||||||| |||| || |||||    
T  18206479 cgagaaattacgaatgaggaatacactatctatagggaaagtttccacctgacttgggctaaaa 18206416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 18 - 199
Target Start/End: Complemental strand, 24341130 - 24340950
Alignment:
Q  18 ttagttacacatggtaactaaagacaagatacaaaaagataaaaacataccctagaaaagataggagaagatagaactcctcctagtctcctagaatcgc 117  Q
    ||||||||||||| ||| ||| ||||| |||| |||||||||||||||| ||||||||||||||||||||||| | |||||| | ||||| |||||||      
T  24341130 ttagttacacatgataattaa-gacaaaatacgaaaagataaaaacatatcctagaaaagataggagaagataaagctcctctttgtctcatagaatcat 24341032  T
Q  118 cttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaaggcggtatttacagggaaagtttccacctaact 199  Q
    ||||||||| |||| ||| | || ||||||||||||| ||||||| |||   |||||||| || ||||||||||||||||||    
T  24341031 cttcctcttaaacttctctatttttgaacgagaaattgtgaatgacgaatatggtatttatagagaaagtttccacctaact 24340950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 18 - 195
Target Start/End: Original strand, 26121715 - 26121896
Alignment:
Q  18 ttagttacacatggtaactaaagacaagatacaaaaagataaaaacataccctagaaaagataggagaagataga---actcctcct-agtctcctagaa 113  Q
    |||||||||||| ||||||||||||||  ||||||||||||||||||||||  ||||||   |||||||||||||   ||||||||| |  ||  |||||    
T  26121715 ttagttacacattgtaactaaagacaaattacaaaaagataaaaacatacctgagaaaaacaaggagaagatagagaaactcctcctgaagcttttagaa 26121814  T
Q  114 tcgccttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaaggcggtatttacagggaaagtttccacct 195  Q
    ||||||||||||||||||| ||||||| | ||| |||||||||||||||||||||  ||||||| |  |||| |||||||||    
T  26121815 tcgccttcctcttgaactgatccagtttttaacaagaaattatgaatgaggaaggatgtatttataatgaaaatttccacct 26121896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 285 - 391
Target Start/End: Original strand, 18831920 - 18832026
Alignment:
Q  285 caggcgcttcagtgtaaattcagtgctgaaatgcctgtcttcttcgctcgtttttgtgttttcttcaatgtaagatgtctaggaacttgggaacataatt 384  Q
    ||||||||||||||||||||||||  |||||||||||| |||||||| |||||| ||||||||||||||||||||||||| ||||||||  |||||||||    
T  18831920 caggcgcttcagtgtaaattcagtattgaaatgcctgttttcttcgcccgttttggtgttttcttcaatgtaagatgtcttggaacttgataacataatt 18832019  T
Q  385 cgtccct 391  Q
    | |||||    
T  18832020 cctccct 18832026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 18 - 199
Target Start/End: Complemental strand, 24264500 - 24264321
Alignment:
Q  18 ttagttacacatggtaactaaagacaagatacaaaaagataaaaacataccctagaaaagataggagaagatagaactcctcctagtctcctagaatcgc 117  Q
    ||||||||||||| ||| ||| ||||| |||| ||||||||||| |||| ||||||||||||||||||||||| | |||||| | ||||| |||||||      
T  24264500 ttagttacacatgataattaa-gacaaaatacgaaaagataaaa-catatcctagaaaagataggagaagataaagctcctctttgtctcatagaatcat 24264403  T
Q  118 cttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaaggcggtatttacagggaaagtttccacctaact 199  Q
    ||||||||| |||| ||| | || ||||||||||||| ||||||| |||   |||||||| || ||||||||||||||||||    
T  24264402 cttcctcttaaacttctctatttttgaacgagaaattgtgaatgacgaatatggtatttatagagaaagtttccacctaact 24264321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 19 - 195
Target Start/End: Complemental strand, 24266054 - 24265879
Alignment:
Q  19 tagttacacatggtaactaaagacaagatacaaaaagataaaaacataccctagaaaagata-ggagaagatagaactcctcctagt-ctcctagaatcg 116  Q
    ||||||||| || ||||||| ||||| || ||||||||||||||||||||||||||| |||| |||||||||| |||||||||||   ||||||||||||    
T  24266054 tagttacacgtgataactaa-gacaaaattcaaaaagataaaaacataccctagaaa-gataaggagaagataaaactcctcctaaagctcctagaatcg 24265957  T
Q  117 ccttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaaggcggtatttacagggaaagtttccacct 195  Q
     ||||| ||||||| | | | |||||||||||||||||| |||||| |||||| ||||||| ||  |||||||||||||    
T  24265956 gcttccccttgaacagtttctgttctgaacgagaaattaagaatgaagaaggc-gtatttatagttaaagtttccacct 24265879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 19 - 195
Target Start/End: Complemental strand, 24342685 - 24342510
Alignment:
Q  19 tagttacacatggtaactaaagacaagatacaaaaagataaaaacataccctagaaaagata-ggagaagatagaactcctcctagt-ctcctagaatcg 116  Q
    ||||||||| || ||||||| ||||| || ||||||||||||||||||||||||||| |||| |||||||||| |||||||||||   ||||||||||||    
T  24342685 tagttacacgtgataactaa-gacaaaattcaaaaagataaaaacataccctagaaa-gataaggagaagataaaactcctcctaaagctcctagaatcg 24342588  T
Q  117 ccttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaaggcggtatttacagggaaagtttccacct 195  Q
     ||||| ||||||| | | | |||||||||||||||||| |||||| |||||| ||||||| ||  |||||||||||||    
T  24342587 gcttccccttgaacagtttctgttctgaacgagaaattaagaatgaagaaggc-gtatttatagttaaagtttccacct 24342510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 291 - 379
Target Start/End: Complemental strand, 31600407 - 31600319
Alignment:
Q  291 cttcagtgtaaattcagtgctgaaatgcctgtcttcttcgctcgtttttgtgttttcttcaatgtaagatgtctaggaacttgggaaca 379  Q
    |||||||||||||||||||||||||||||| | |||||||| |||||| |||||||||||| |||||||||||| ||||||||||||||    
T  31600407 cttcagtgtaaattcagtgctgaaatgcctattttcttcgcccgttttggtgttttcttcattgtaagatgtcttggaacttgggaaca 31600319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 50 - 162
Target Start/End: Complemental strand, 24661601 - 24661487
Alignment:
Q  50 aaaaagataaaaacataccctagaaaagata-ggagaagatagaactcctcct-agtctcctagaatcgccttcctcttgaactgctccagttctgaacg 147  Q
    ||||| || ||||||||||||| |||||||| |||||||||| ||||||| || |  |||||||||||||||||||||||||||||||| |||||||||     
T  24661601 aaaaaaattaaaacataccctataaaagataaggagaagataaaactccttcttaagctcctagaatcgccttcctcttgaactgctcctgttctgaact 24661502  T
Q  148 agaaattatgaatga 162  Q
    |||||||||||||||    
T  24661501 agaaattatgaatga 24661487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 119 - 195
Target Start/End: Complemental strand, 24162693 - 24162617
Alignment:
Q  119 ttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaaggcggtatttacagggaaagtttccacct 195  Q
    ||||||||||| |||| ||||| |||||||||||||||||||||||||| ||||||||| ||| |||||||||||||    
T  24162693 ttcctcttgaattgcttcagttatgaacgagaaattatgaatgaggaagacggtatttataggaaaagtttccacct 24162617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 105 - 189
Target Start/End: Original strand, 22871798 - 22871883
Alignment:
Q  105 ctcctagaatc-gccttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaaggcggtatttacagggaaagttt 189  Q
    ||||||||||| | ||||||||||||||||||||||| |||||||| |||||| |||||||||||  ||||||| |||||||||||    
T  22871798 ctcctagaatctgtcttcctcttgaactgctccagttttgaacgaggaattataaatgaggaaggtagtatttatagggaaagttt 22871883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 18 - 169
Target Start/End: Complemental strand, 16522599 - 16522449
Alignment:
Q  18 ttagttacacatggtaactaaagacaagatacaaaaagataaaaacataccctagaaaagataggagaagatagaa-ctcctcctagtctcctagaatcg 116  Q
    |||||||||| ||||||||||| ||||  ||| ||| ||||||||||||||||||||||   |||||||| ||||| |||  || |  |||| | | |      
T  16522599 ttagttacacgtggtaactaaaaacaaattactaaa-gataaaaacataccctagaaaatcaaggagaaggtagaaactctcccgaagctccaa-agttt 16522502  T
Q  117 ccttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaaggc 169  Q
    |||||||||||||||||||||||||||| |||||| || ||||||||||||||    
T  16522501 ccttcctcttgaactgctccagttctgatcgagaagttctgaatgaggaaggc 16522449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 167
Target Start/End: Original strand, 28665834 - 28665982
Alignment:
Q  18 ttagttacacatggtaactaaagacaagatacaaaaagataaaaacataccctagaaaagataggagaagatagaa-ctcctcctagtctcctagaatcg 116  Q
    ||||||||||||||||||||||  |||  ||| ||| ||||||||||||||||||||||   |||||||||||||  |||  || |  || | | | |||    
T  28665834 ttagttacacatggtaactaaaatcaaattactaaa-gataaaaacataccctagaaaatcaaggagaagatagattctctcccgaaactgcaa-agtcg 28665931  T
Q  117 ccttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaag 167  Q
    |||||||||||||||||| |||||||||| |||||||| | ||||||||||    
T  28665932 ccttcctcttgaactgctacagttctgaatgagaaattctaaatgaggaag 28665982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 105 - 193
Target Start/End: Original strand, 24261501 - 24261590
Alignment:
Q  105 ctcctagaatc-gccttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaaggcggtatttacagggaaagtttccac 193  Q
    ||||||||||| ||||| |||||||| |||||||||| |||| ||||||||||||||| | ||  ||||||||| ||| |||||||||||    
T  24261501 ctcctagaatctgccttgctcttgaattgctccagttttgaatgagaaattatgaatgggaaattcggtatttataggaaaagtttccac 24261590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 118 - 177
Target Start/End: Complemental strand, 19007483 - 19007423
Alignment:
Q  118 cttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaaggc-ggtattta 177  Q
    ||||||||||||||||| |||||||||||| |||||| |||||||||||||| ||||||||    
T  19007483 cttcctcttgaactgcttcagttctgaacgggaaattctgaatgaggaaggctggtattta 19007423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 20 - 169
Target Start/End: Complemental strand, 23388270 - 23388122
Alignment:
Q  20 agttacacatggtaactaaagacaagatacaaaaagataaaaacataccctagaaaagataggagaagatagaa-ctcctcctagtctcctagaatcgcc 118  Q
    |||||||||||||||||||| ||||  ||| ||| ||||||||||||||||||||||   ||||||| |||||  |||  || |  |||| | | | |||    
T  23388270 agttacacatggtaactaaaaacaaactactaaa-gataaaaacataccctagaaaatcaaggagaaaatagattctcgcccgatgctccaa-agtagcc 23388173  T
Q  119 ttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaaggc 169  Q
    | |||||||||||||| |||| |||||| ||||||| ||||||||||||||    
T  23388172 tacctcttgaactgcttcagtcctgaacaagaaattgtgaatgaggaaggc 23388122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 166
Target Start/End: Complemental strand, 20314520 - 20314373
Alignment:
Q  18 ttagttacacatggtaactaaagacaagatacaaaaagataaaaacataccctagaaaagataggagaagatagaactcctcct-agtctcctagaatcg 116  Q
    ||||||||||| |||||||||| | ||  ||| ||| ||| ||||||||||||||||||   ||||||||||| ||   ||||| |  |||| | | |||    
T  20314520 ttagttacacaaggtaactaaaaaaaaattactaaa-gatcaaaacataccctagaaaatcaaggagaagataaaaactctcctgaagctccaa-agtcg 20314423  T
Q  117 ccttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaa 166  Q
    | |||||||||||||||  ||||||||||||||||||| |||||||||||    
T  20314422 cattcctcttgaactgccacagttctgaacgagaaattctgaatgaggaa 20314373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 25 - 168
Target Start/End: Complemental strand, 21914812 - 21914670
Alignment:
Q  25 cacatggtaactaaaga-caagatacaaaaagataaaaacataccctagaaaagataggagaagatagaa-ctcctcctagtctcctagaatcgccttcc 122  Q
    ||||||||||||||| | ||||||| ||||| |||||||||||||||||||||   ||| ||| |||||  |||  || | ||||| | | | |||||||    
T  21914812 cacatggtaactaaaaaacaagatataaaaa-ataaaaacataccctagaaaattgaggcgaaaatagattctctcccgaatctccaa-agtagccttcc 21914715  T
Q  123 tcttgaactgctccagttctgaacgagaaattatgaatgaggaagg 168  Q
    |||||||||||| ||||| ||||||||||||| |||||||||||||    
T  21914714 tcttgaactgcttcagtt-tgaacgagaaattttgaatgaggaagg 21914670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 18 - 169
Target Start/End: Original strand, 34131429 - 34131579
Alignment:
Q  18 ttagttacacatggtaactaaagacaagatacaaaaagataaaaacataccctagaaaagataggagaagatag-aactcctcctagtctcctagaatcg 116  Q
    ||||||||| ||||||| |||| ||||  ||| ||| ||||||||||||||||||||||   |||||||||||| |||||  || |  |||| | | | |    
T  34131429 ttagttacatatggtaattaaaaacaaattactaaa-gataaaaacataccctagaaaatcaaggagaagatagaaactctcccgaagctcc-aaagttg 34131526  T
Q  117 ccttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaaggc 169  Q
    ||||||||||||| |||  || |||||||||||||||| | ||||||||||||    
T  34131527 ccttcctcttgaattgccacaattctgaacgagaaattctaaatgaggaaggc 34131579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 76
Target Start/End: Original strand, 20859721 - 20859778
Alignment:
Q  18 ttagttacacatggtaactaaagacaagatacaaaaagataaaaacataccctagaaaa 76  Q
    |||||||||||||||||||||| ||||  ||| ||| ||||||||||||||||||||||    
T  20859721 ttagttacacatggtaactaaaaacaaattactaaa-gataaaaacataccctagaaaa 20859778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 116 - 177
Target Start/End: Original strand, 23338358 - 23338420
Alignment:
Q  116 gccttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaaggc-ggtattta 177  Q
    ||||||||||||||||||   |||||||||||||||||| |||||||| ||||| ||||||||    
T  23338358 gccttcctcttgaactgccaaagttctgaacgagaaattctgaatgagtaaggctggtattta 23338420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 116 - 169
Target Start/End: Complemental strand, 24321182 - 24321129
Alignment:
Q  116 gccttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaaggc 169  Q
    |||||||| |||||||||  ||||||||||| ||||||| ||||||||||||||    
T  24321182 gccttcctattgaactgccacagttctgaacaagaaattctgaatgaggaaggc 24321129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 116 - 169
Target Start/End: Complemental strand, 24658956 - 24658903
Alignment:
Q  116 gccttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaaggc 169  Q
    |||||||||||||||||   ||||||||||| ||||||| ||||||||||||||    
T  24658956 gccttcctcttgaactgtcacagttctgaacaagaaattctgaatgaggaaggc 24658903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 283 - 391
Target Start/End: Original strand, 18939216 - 18939324
Alignment:
Q  283 cccaggcgcttcagtgtaaattcagtgctgaaatgcctgtcttcttcgctcgtttttgtgttttcttcaatgtaagatgtctaggaacttgggaacataa 382  Q
    ||||||||||| |||| ||| | |||| ||||||||| || ||||||||  || || ||||||||||||| | |||| |||| | |||||||||| | ||    
T  18939216 cccaggcgctttagtgcaaacttagtgttgaaatgcccgttttcttcgcctgtcttggtgttttcttcaaagcaagacgtcttgaaacttgggaataaaa 18939315  T
Q  383 ttcgtccct 391  Q
    || ||||||    
T  18939316 tttgtccct 18939324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 192
Target Start/End: Complemental strand, 19762225 - 19762150
Alignment:
Q  116 gccttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaaggcggtatttacagggaaagtttcca 192  Q
    ||||||||||||||||||| | |||||||| ||||| || ||||||||||| | |||||||| | ||| ||||||||    
T  19762225 gccttcctcttgaactgcttc-gttctgaatgagaatttgtgaatgaggaatgtggtatttataaggagagtttcca 19762150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 340 - 396
Target Start/End: Complemental strand, 24849832 - 24849776
Alignment:
Q  340 gtgttttcttcaatgtaagatgtctaggaacttgggaacataattcgtccctatgct 396  Q
    |||||| |||| ||||||||||||| | |||||||||||||||||| ||||| ||||    
T  24849832 gtgtttgcttctatgtaagatgtcttgaaacttgggaacataattcctccctttgct 24849776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 340 - 384
Target Start/End: Original strand, 34488609 - 34488653
Alignment:
Q  340 gtgttttcttcaatgtaagatgtctaggaacttgggaacataatt 384  Q
    |||||| | |||||||||||||||| |||||||||||||||||||    
T  34488609 gtgtttgcgtcaatgtaagatgtcttggaacttgggaacataatt 34488653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 122 - 177
Target Start/End: Complemental strand, 17470222 - 17470167
Alignment:
Q  122 ctcttgaactgctccagttctgaacgagaaattatgaatgaggaaggcggtattta 177  Q
    ||||||||||||||||||  ||||||||||||   |||||||||| ||||||||||    
T  17470222 ctcttgaactgctccagtaatgaacgagaaatagagaatgaggaatgcggtattta 17470167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 18 - 92
Target Start/End: Complemental strand, 24321281 - 24321207
Alignment:
Q  18 ttagttacacatggtaactaaagacaagatacaaaaagataaaaac-ataccctagaaaagataggagaagataga 92  Q
    |||||||||||||||||||||| ||||  ||| |||  |||||||| ||||||||||||| | |||||||||||||    
T  24321281 ttagttacacatggtaactaaaaacaaattactaaagaataaaaacaataccctagaaaata-aggagaagataga 24321207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 116 - 163
Target Start/End: Original strand, 26252950 - 26252996
Alignment:
Q  116 gccttcctcttgaactgctccagttctgaacgagaaattatgaatgag 163  Q
    ||||||||||||||||||| || ||||||| |||||||||||||||||    
T  26252950 gccttcctcttgaactgcttca-ttctgaatgagaaattatgaatgag 26252996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 343 - 384
Target Start/End: Original strand, 18227368 - 18227409
Alignment:
Q  343 ttttcttcaatgtaagatgtctaggaacttgggaacataatt 384  Q
    |||||||| || |||||||||| |||||||||||||||||||    
T  18227368 ttttcttccatataagatgtcttggaacttgggaacataatt 18227409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 121 - 162
Target Start/End: Original strand, 20859803 - 20859844
Alignment:
Q  121 cctcttgaactgctccagttctgaacgagaaattatgaatga 162  Q
    ||||||||||| |  |||||||||||||||||||||||||||    
T  20859803 cctcttgaacttccacagttctgaacgagaaattatgaatga 20859844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 151; Significance: 9e-80; HSPs: 53)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 151; E-Value: 9e-80
Query Start/End: Original strand, 18 - 232
Target Start/End: Complemental strand, 3115444 - 3115230
Alignment:
Q  18 ttagttacacatggtaactaaagacaagatacaaaaagataaaaacataccctagaaaagataggagaagatagaactcctcctagtctcctagaatcgc 117  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| | | |||||||||||||    
T  3115444 ttagttacacatgataattaaagacaagatacaaaaagataaaaacataccctataaaagataggagaagatagaactcctctttggctcctagaatcgc 3115345  T
Q  118 cttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaaggcggtatttacagggaaagtttccacctaacttagggtaaaagtatgggt 217  Q
    ||||||||||||||| || |||||||||||| |||||||||||||||||||||||||||| ||| || ||||||||||||||| || |||||||||||||    
T  3115344 cttcctcttgaactgatcgagttctgaacgataaattatgaatgaggaaggcggtatttataggaaaggtttccacctaacttgggctaaaagtatgggt 3115245  T
Q  218 tttccaggggtgaaa 232  Q
    |||||| ||| ||||    
T  3115244 tttccaagggcgaaa 3115230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 136; E-Value: 8e-71
Query Start/End: Original strand, 22 - 232
Target Start/End: Original strand, 5509412 - 5509623
Alignment:
Q  22 ttacacatggtaactaaagacaagatacaaaa-agataaaaacataccctagaaaagataggagaagatagaactcctcctagtctcctagaatcgcctt 120  Q
    |||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||| | | |||||| ||||| |||    
T  5509412 ttacacttggtaactaaagacaagatacaaaaaagataaaaacataccctagaaaagataggagaagataaaactcctcattggctcctataatcggctt 5509511  T
Q  121 cctcttgaactgctccagttctgaacgagaaattatgaatgaggaaggcggtatttacagggaaagtttccacctaacttagggtaaaagtatgggtttt 220  Q
    |||||||||||||||||||  |||||||||||||||||||||||||| ||||||||| ||||||||||||||||| |||| || || |||||||||||||    
T  5509512 cctcttgaactgctccagtattgaacgagaaattatgaatgaggaagacggtatttatagggaaagtttccacctgacttgggctagaagtatgggtttt 5509611  T
Q  221 ccaggggtgaaa 232  Q
    ||| ||| ||||    
T  5509612 ccatgggcgaaa 5509623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 51 - 221
Target Start/End: Original strand, 16222891 - 16223061
Alignment:
Q  51 aaaagataaaaacataccctagaaaagataggagaagatagaactcctcctagtctcctagaatcgccttcctcttgaactgctccagttctgaacgaga 150  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||| ||||||||||||||||||||||||||| |||||||    
T  16222891 aaaagataaaaacataccctagaaaagataggagaagatagaactcctccttggctcctagaattgccttcctcttgaactgctccagttcttaacgaga 16222990  T
Q  151 aattatgaatgaggaaggcggtatttacagggaaagtttccacctaacttagggtaaaagtatgggttttc 221  Q
    |||||||||||||| ||| |||||||| ||||||||||||||  | |||| ||||||||||||||| ||||    
T  16222991 aattatgaatgaggcaggtggtatttatagggaaagtttccatttgactttgggtaaaagtatgggctttc 16223061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 18 - 195
Target Start/End: Original strand, 8144542 - 8144723
Alignment:
Q  18 ttagttacacatggtaactaaagacaagatacaaaaagataaaaacataccctagaaaagataggagaagatagaa---ctcctcct-agtctcctagaa 113  Q
    |||||||||||| ||||||||||||||  ||| ||||||||||||||| ||||||||||   ||||||||||||||   |||||||| |  || ||||||    
T  8144542 ttagttacacattgtaactaaagacaaattactaaaagataaaaacatgccctagaaaaacaaggagaagatagaaaaactcctcctgaagcttctagaa 8144641  T
Q  114 tcgccttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaaggcggtatttacagggaaagtttccacct 195  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||| |||||||||||    
T  8144642 tcgcattcctcttgaactgctccagttctgaacgagaaattatgaatgaggaaggcggtatttatttggagagtttccacct 8144723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 46 - 200
Target Start/End: Complemental strand, 3429957 - 3429802
Alignment:
Q  46 atacaaaaagataaaaacataccctagaaaagataggagaagatagaactcctcctagtctcctagaatcgccttcctcttgaactgctccagttctgaa 145  Q
    |||| |||||||| |||||| ||||| |||||| | |||||||||||||||||||| | |||||||||| ||||||||||||||||||||||||||||||    
T  3429957 atactaaaagatataaacatcccctaaaaaagagaagagaagatagaactcctccttggctcctagaatagccttcctcttgaactgctccagttctgaa 3429858  T
Q  146 cgagaaattatgaatgaggaaggc-ggtatttacagggaaagtttccacctaactt 200  Q
    | ||||||| ||||||||||||||   |||||| |||||||||||| |||||||||    
T  3429857 caagaaattgtgaatgaggaaggctcttatttatagggaaagtttcgacctaactt 3429802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 19 - 200
Target Start/End: Original strand, 17205820 - 17206002
Alignment:
Q  19 tagttacacatggtaactaaagacaagatacaaaaagataaaaacataccctagaaaagatag-gagaagatagaactcctcct-agtctcctagaatcg 116  Q
    |||||||||||| ||||||| ||||| |||||||| |||||| |||||||||| ||||||||  ||||||| | ||||| |||| |  ||||||||||||    
T  17205820 tagttacacatgataactaa-gacaaaatacaaaaggataaacacataccctataaaagataaagagaagacaaaactcatcctgaagctcctagaatcg 17205918  T
Q  117 ccttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaaggcggtatttacagggaaagtttccacctaactt 200  Q
    |||||||||||||||||||| || | ||||||||||||||||||||||||||||||||||| | | ||||||||||||| ||||    
T  17205919 ccttcctcttgaactgctcctgtccagaacgagaaattatgaatgaggaaggcggtatttataagaaaagtttccacctgactt 17206002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 265 - 391
Target Start/End: Complemental strand, 3115128 - 3115002
Alignment:
Q  265 aggcgcttttctgaagctcccaggcgcttcagtgtaaattcagtgctgaaatgcctgtcttcttcgctcgtttttgtgttttcttcaatgtaagatgtct 364  Q
    |||||||||||||||||  ||||| |||||||||||||||||||||| |||||| ||||||||||||| ||||| ||| |||||||||||||| ||||||    
T  3115128 aggcgcttttctgaagcgtccaggtgcttcagtgtaaattcagtgctaaaatgcttgtcttcttcgcttgttttggtgctttcttcaatgtaaaatgtct 3115029  T
Q  365 aggaacttgggaacataattcgtccct 391  Q
     |||||||||||||||||||| |||||    
T  3115028 tggaacttgggaacataattcctccct 3115002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 19 - 164
Target Start/End: Complemental strand, 2722908 - 2722760
Alignment:
Q  19 tagttacacatggtaactaaagacaagatacaaaaagataaaaacatac----cctagaaaagataggagaagatagaactcctcct-agtctcctagaa 113  Q
    |||||||| ||| ||||||| ||||| ||||||||||||||||||||||    ||||||||| | |||||||||||||||||||||| |  |||||||||    
T  2722908 tagttacatatgataactaa-gacaaaatacaaaaagataaaaacatacgtaccctagaaaata-aggagaagatagaactcctcctgaagctcctagaa 2722811  T
Q  114 tcgccttcctcttgaactgctccagttctgaacgagaaattatgaatgagg 164  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||||||    
T  2722810 tcgccttcctcttgaactactccatttctgaacgagaaattatgaatgagg 2722760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 21 - 177
Target Start/End: Complemental strand, 3386409 - 3386254
Alignment:
Q  21 gttacacatggtaactaaagacaagatacaaaaagataaaaacataccctagaaaagataggagaagatagaactcctcctagtctcctagaatcgcctt 120  Q
    |||||||| | ||||||| || || |||||| |||||| ||||||||| ||||||||||||||||||||| |||||||||| | | | |||||| |||||    
T  3386409 gttacacaagataactaa-gataaaatacaagaagatataaacataccttagaaaagataggagaagataaaactcctccttggcacttagaattgcctt 3386311  T
Q  121 cctcttgaactgctccagttctgaacgagaaattatgaatgaggaaggcggtattta 177  Q
    |||||||||||||||||||| ||||  | ||||| ||||||||||||| ||||||||    
T  3386310 cctcttgaactgctccagttatgaattataaattttgaatgaggaaggtggtattta 3386254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 109 - 200
Target Start/End: Original strand, 17134557 - 17134648
Alignment:
Q  109 tagaatcgccttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaaggcggtatttacagggaaagtttccacctaactt 200  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| | |||||||||| ||||||||||||||| ||||    
T  17134557 tagaatcgccttcctcttgaactgatccagttctgaacgagaaattatgaatgaggaatgaggtatttacaaggaaagtttccacctgactt 17134648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 17 - 167
Target Start/End: Original strand, 41509536 - 41509685
Alignment:
Q  17 attagttacacatggtaactaaagacaagatacaaaaagataaaaacataccctagaaaagataggagaagatagaa-ctcctcctagtctcctagaatc 115  Q
    |||||||||||||| |||||||| ||||  ||| ||| ||||||||||||||||||||||   |||||||||||||| ||||||| |  ||| ||||||     
T  41509536 attagttacacatgataactaaaaacaaattactaaa-gataaaaacataccctagaaaatcaaggagaagatagaaactcctccgaagctc-tagaatt 41509633  T
Q  116 gccttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaag 167  Q
    ||||||||||||||||||  |||||||||||||||||||||||| |||||||    
T  41509634 gccttcctcttgaactgccacagttctgaacgagaaattatgaacgaggaag 41509685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 18 - 183
Target Start/End: Complemental strand, 31285029 - 31284863
Alignment:
Q  18 ttagttacacatggtaactaaagacaagatacaaaaagataaaaacataccctagaaaagataggagaagatag---aactcctcct-agtctcctagaa 113  Q
    ||||||||||| |||||||||||||||  ||| |||||||||||| |||||||||||||   ||||||||||||   ||||| || | |  ||| |||||    
T  31285029 ttagttacacaaggtaactaaagacaaattactaaaagataaaaatataccctagaaaaacaaggagaagatagaaaaactcttcatgaagctcttagaa 31284930  T
Q  114 tcgccttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaaggcggtatttacaggga 183  Q
    ||||||||||||||||||||||||||||||| ||   || |||||||||||||| | ||||||| |||||    
T  31284929 tcgccttcctcttgaactgctccagttctgagcg---aaatatgaatgaggaagacagtatttataggga 31284863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 18 - 166
Target Start/End: Complemental strand, 8115986 - 8115839
Alignment:
Q  18 ttagttacacatggtaactaaagacaagatacaaaaagataaaaacataccctagaaaagataggagaagatag-aactcctcctagtctcctagaatcg 116  Q
    |||||||||||||||||| ||| | ||  |||  |||||||||||||||||||||||||   |||||| ||||| ||||||||| |  || ||||||| |    
T  8115986 ttagttacacatggtaacaaaaaaaaaattac-taaagataaaaacataccctagaaaaataaggagatgatagaaactcctccgaagct-ctagaattg 8115889  T
Q  117 ccttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaa 166  Q
     ||||||||||||||||||||||||||||| ||||||| |||||||||||    
T  8115888 tcttcctcttgaactgctccagttctgaacaagaaattctgaatgaggaa 8115839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 17 - 167
Target Start/End: Complemental strand, 2166708 - 2166559
Alignment:
Q  17 attagttacacatggtaactaaagacaagatacaaaaagataaaaacataccctagaaaagataggagaagatag-aactcctcctagtctcctagaatc 115  Q
    ||||||||||||||||||||||| ||||  ||| ||| ||||||||||||||||||||||   ||||||| |||| ||||||| | |  || |||||||     
T  2166708 attagttacacatggtaactaaaaacaaattactaaa-gataaaaacataccctagaaaatcaaggagaatatagaaactccttcgaagct-ctagaatt 2166611  T
Q  116 gccttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaag 167  Q
    ||||||||||||||||||  ||||| ||||| ||||||| ||||||||||||    
T  2166610 gccttcctcttgaactgccacagttttgaacaagaaattctgaatgaggaag 2166559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 268 - 391
Target Start/End: Original strand, 5509750 - 5509873
Alignment:
Q  268 cgcttttctgaagctcccaggcgcttcagtgtaaattcagtgctgaaatgcctgtcttcttcgctcgtttttgtgttttcttcaatgtaagatgtctagg 367  Q
    ||||||||  |||| |||||||| |||||||||||||||||||| ||  ||| ||||||||||  |||||| ||||||||||||||||||||| ||| |     
T  5509750 cgcttttccaaagcgcccaggcgtttcagtgtaaattcagtgcttaatcgcccgtcttcttcgtccgttttagtgttttcttcaatgtaagatatcttga 5509849  T
Q  368 aacttgggaacataattcgtccct 391  Q
    |||||| ||||| ||||| |||||    
T  5509850 aacttgagaacaaaattcctccct 5509873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 19 - 168
Target Start/End: Complemental strand, 19909733 - 19909585
Alignment:
Q  19 tagttacacatggtaactaaagacaagatacaaaaagataaaaacataccctagaaaagataggagaagatagaactcctcct-agtctcctagaatcgc 117  Q
    ||||||||||||||||||||  ||||  ||| ||| ||||||||||||||||||||||   ||||||||||||||   ||||| |  |||| | |||||     
T  19909733 tagttacacatggtaactaatcacaaattactaaa-gataaaaacataccctagaaaatcaaggagaagatagaaactctcctgaagctccaa-aatcgt 19909636  T
Q  118 cttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaagg 168  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||| ||||    
T  19909635 cttcctcttgaactgctccagttctgaacaagaaattctgaatgagtaagg 19909585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 115 - 193
Target Start/End: Original strand, 22246437 - 22246515
Alignment:
Q  115 cgccttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaaggcggtatttacagggaaagtttccac 193  Q
    ||||||||| |||||||||  || ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  22246437 cgccttcctgttgaactgcctcatttctgaacgagaaataatgaatgaggaaggcggtatttatagggaaagtttccac 22246515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 119 - 195
Target Start/End: Complemental strand, 23699048 - 23698972
Alignment:
Q  119 ttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaaggcggtatttacagggaaagtttccacct 195  Q
    ||||||||||| ||||||||||||||||||||| ||||||||||||||| ||||||||| ||||| | |||||||||    
T  23699048 ttcctcttgaattgctccagttctgaacgagaatttatgaatgaggaagacggtatttatagggagaatttccacct 23698972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 119 - 195
Target Start/End: Complemental strand, 23717503 - 23717427
Alignment:
Q  119 ttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaaggcggtatttacagggaaagtttccacct 195  Q
    ||||||||||| ||||||||||||||||||||| ||||||||||||||| ||||||||| ||||| | |||||||||    
T  23717503 ttcctcttgaattgctccagttctgaacgagaatttatgaatgaggaagacggtatttatagggagaatttccacct 23717427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 119 - 195
Target Start/End: Complemental strand, 23735959 - 23735883
Alignment:
Q  119 ttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaaggcggtatttacagggaaagtttccacct 195  Q
    ||||||||||| ||||||||||||||||||||| ||||||||||||||| ||||||||| ||||| | |||||||||    
T  23735959 ttcctcttgaattgctccagttctgaacgagaatttatgaatgaggaagacggtatttatagggagaatttccacct 23735883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 18 - 168
Target Start/End: Original strand, 19533164 - 19533313
Alignment:
Q  18 ttagttacacatggtaactaaagacaagatacaaaaagataaaaacataccctagaaaagataggagaagatag-aactcctcctagtctcctagaatcg 116  Q
    |||||||||||||||||||||| ||||||||  ||||||||||||||||| ||||||||   |||||||||||| |||||  || |  |||| | | |      
T  19533164 ttagttacacatggtaactaaaaacaagata-taaaagataaaaacatacactagaaaatcaaggagaagatagaaactctcccgaagctcc-aaagtac 19533261  T
Q  117 ccttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaagg 168  Q
    |||||||||||||||||| ||||||||||||||  ||| |||||||||||||    
T  19533262 ccttcctcttgaactgcttcagttctgaacgagcgattctgaatgaggaagg 19533313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 116 - 195
Target Start/End: Complemental strand, 22471075 - 22470996
Alignment:
Q  116 gccttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaaggcggtatttacagggaaagtttccacct 195  Q
    |||||||||||||||||||| ||||| ||||||||||| |||||||| |||||| ||||||| || ||||||||||||||    
T  22471075 gccttcctcttgaactgctcaagttccgaacgagaaataatgaatgatgaaggcagtatttatagcgaaagtttccacct 22470996  T

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Target: chr3; HSP #23
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 18 - 190
Target Start/End: Complemental strand, 19575263 - 19575091
Alignment:
Q  18 ttagttacacatggtaactaaagacaagatacaaaaagataaaaacataccctagaaaagataggagaagatagaactcctcct-agtctcctagaatcg 116  Q
    |||||||||||||||||||||| ||||  ||| ||| ||||||||||||| ||||||||   |||||||||||||| | ||||  |  |||| | | | |    
T  19575263 ttagttacacatggtaactaaaaacaaattactaaa-gataaaaacatacactagaaaatcaaggagaagatagaaattctcccgaagctccaa-agttg 19575166  T
Q  117 ccttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaaggc-ggtatttacagggaaagtttc 190  Q
    |||||||||||||||||| | ||| ||||||||||||| |||||||||||||| |||||||| || || ||||||    
T  19575165 ccttcctcttgaactgctgcggttttgaacgagaaattctgaatgaggaaggctggtatttatagtgagagtttc 19575091  T

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Target: chr3; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 18 - 167
Target Start/End: Complemental strand, 12373011 - 12372858
Alignment:
Q  18 ttagttacacatggtaactaaagacaagatacaaaaagataaaaacataccctagaaaagataggagaagatag----aactcctcct-agtctcctaga 112  Q
    ||||||||||||||||| |||||||||  ||| ||| ||||||||||||||||||||||   ||||||||||||    ||||| || | |  ||||| ||    
T  12373011 ttagttacacatggtaaataaagacaaattactaaa-gataaaaacataccctagaaaaacaaggagaagatagaaaaaactcatcttgaagctcctcga 12372913  T
Q  113 atcgccttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaag 167  Q
    |||||||| ||||||||||  ||||||| ||||||||||||| ||||||| ||||    
T  12372912 atcgccttactcttgaacttgtccagttgtgaacgagaaattgtgaatgaagaag 12372858  T

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Target: chr3; HSP #25
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 116 - 168
Target Start/End: Original strand, 27073391 - 27073443
Alignment:
Q  116 gccttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaagg 168  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  27073391 gccttcctcttgaactgctccagttctgaacgagaaattctgaatgaggaagg 27073443  T

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Target: chr3; HSP #26
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 18 - 195
Target Start/End: Complemental strand, 27413362 - 27413185
Alignment:
Q  18 ttagttacacatggtaactaaagacaagatacaaaaagataaaaacataccctagaaaagataggagaagataga-actcctcctagtctcctagaatcg 116  Q
    |||| ||| |||| |||||||| |||||||| || | ||||||||||||| ||||||||   ||||||||||||| ||||  || |  |||| | | | |    
T  27413362 ttagctacgcatgataactaaaaacaagatataata-gataaaaacatactctagaaaatgaaggagaagatagacactctcccgaagctccaa-agtag 27413265  T
Q  117 ccttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaaggc-ggtatttacagggaaagtttccacct 195  Q
    ||||||||||||| ||||||||||||||||||| ||||||||||||| ||||| |||||||| || || |||||| ||||    
T  27413264 ccttcctcttgaattgctccagttctgaacgagtaattatgaatgagaaaggctggtatttatagtgagagtttctacct 27413185  T

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Target: chr3; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 302 - 384
Target Start/End: Original strand, 16223206 - 16223288
Alignment:
Q  302 attcagtgctgaaatgcctgtcttcttcgctcgtttttgtgttttcttcaatgtaagatgtctaggaacttgggaacataatt 384  Q
    ||||| |||||||||||||   |||||||| |||||| || |||||||||||||||||||||| |||||||||||||| ||||    
T  16223206 attcattgctgaaatgccttctttcttcgcccgttttggtattttcttcaatgtaagatgtcttggaacttgggaacaaaatt 16223288  T

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Target: chr3; HSP #28
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 17 - 169
Target Start/End: Complemental strand, 16244751 - 16244600
Alignment:
Q  17 attagttacacatggtaactaaagacaagatacaaaaagataaaaacataccctagaaaagataggagaagatagaa-ctcctcctagtctcctagaatc 115  Q
    |||||||||||||| |||||||| |||| || |  |||||||||||||||||||||||||   ||||||||||| || ||| ||  |  ||| ||||||     
T  16244751 attagttacacatgataactaaaaacaa-attcctaaagataaaaacataccctagaaaatcaaggagaagataaaaactcttctgaaactc-tagaatt 16244654  T
Q  116 gccttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaaggc 169  Q
    ||||||||||||||||||  ||||| ||||||| ||||| |||||||| |||||    
T  16244653 gccttcctcttgaactgccacagttttgaacgaaaaattctgaatgagcaaggc 16244600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 18 - 166
Target Start/End: Complemental strand, 20022613 - 20022466
Alignment:
Q  18 ttagttacacatggtaactaaagacaagatacaaaaagataaaaacataccctagaaaagataggagaagatagaa-ctcctcctagtctcctagaatcg 116  Q
    |||||||||||||||||||||| ||||  ||| ||| |||||||||||||||||||||| | | ||||||||| || |||  || |   ||| | | |||    
T  20022613 ttagttacacatggtaactaaacacaaattactaaa-gataaaaacataccctagaaaataaatgagaagataaaaactctcccgaagttccaa-agtcg 20022516  T
Q  117 ccttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaa 166  Q
    ||||||| |||||||||| ||||||| ||||||||||| |||||||||||    
T  20022515 ccttccttttgaactgctacagttctcaacgagaaattctgaatgaggaa 20022466  T

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Target: chr3; HSP #30
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 105 - 195
Target Start/End: Complemental strand, 19389675 - 19389584
Alignment:
Q  105 ctcctagaatc-gccttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaaggcggtatttacagggaaagtttccacct 195  Q
    ||||||||||| ||||||||||||||||| ||||||||| ||| ||||||||  |||||  ||||||| ||||| |||||||| ||||||||    
T  19389675 ctcctagaatccgccttcctcttgaactgttccagttctaaacaagaaattaaaaatgataaaggcggaatttatagggaaagcttccacct 19389584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 116 - 169
Target Start/End: Original strand, 19169545 - 19169598
Alignment:
Q  116 gccttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaaggc 169  Q
    |||||||||||||||||||||||||||||| |||||||| |||||||| |||||    
T  19169545 gccttcctcttgaactgctccagttctgaatgagaaattctgaatgagaaaggc 19169598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 19 - 101
Target Start/End: Original strand, 8268015 - 8268096
Alignment:
Q  19 tagttacacatggtaactaaagacaagatacaaaaagataaaaacataccctagaaaagataggagaagatagaactcctcct 101  Q
    |||||||||||| ||||| ||||||| ||||||||| ||||||| |||||| |||||| |||||||| |||| || |||||||    
T  8268015 tagttacacatgataact-aagacaaaatacaaaaatataaaaatatacccaagaaaatataggagaggataaaagtcctcct 8268096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 18 - 167
Target Start/End: Original strand, 14977135 - 14977283
Alignment:
Q  18 ttagttacacatggtaactaaagacaagatacaaaaagataaaaacataccctagaaaagataggagaagataga-actcctcctagtctcctagaatcg 116  Q
    |||||||||||||||||||||| | ||  ||| ||| ||| ||||||||||||||||||   ||||||||||||| ||||  || |  |||| | | | |    
T  14977135 ttagttacacatggtaactaaaaataaattactaaa-gatgaaaacataccctagaaaatcaaggagaagatagacactctcccgaagctccaa-agttg 14977232  T
Q  117 ccttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaag 167  Q
    |||||| ||||||||||  |||||||||| |||||||| ||||||||||||    
T  14977233 ccttccccttgaactgccacagttctgaatgagaaattttgaatgaggaag 14977283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 117 - 195
Target Start/End: Complemental strand, 23755008 - 23754930
Alignment:
Q  117 ccttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaaggcggtatttacagggaaagtttccacct 195  Q
    ||||||||||||| |||||||||||| |||||||| |||| |||||||||| |  |||||| ||||| | |||||||||    
T  23755008 ccttcctcttgaattgctccagttctaaacgagaatttataaatgaggaagacaatatttatagggagaatttccacct 23754930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 118 - 166
Target Start/End: Complemental strand, 19170767 - 19170719
Alignment:
Q  118 cttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaa 166  Q
    ||||||||||||||||  ||||||||||||||||| |||||||||||||    
T  19170767 cttcctcttgaactgccacagttctgaacgagaaaatatgaatgaggaa 19170719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 18 - 195
Target Start/End: Original strand, 8171066 - 8171243
Alignment:
Q  18 ttagttacacatggtaactaaagacaagatacaaaaagataaaaacataccctagaaaagataggagaagatagaa-ctcctcctagtctcctagaatcg 116  Q
    |||||||||||| |||||||||  |||  ||| ||| ||||||||||||||||||||||   ||| |||||||||| |||  || |  |||| | | | |    
T  8171066 ttagttacacatagtaactaaaagcaaattactaaa-gataaaaacataccctagaaaatcaaggggaagatagaaactctcccgaagctccaa-agttg 8171163  T
Q  117 ccttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaaggc-ggtatttacagggaaagtttccacct 195  Q
    |||||||||| ||||  ||||||||||||||||||||| |||||||| || || | |||||| || ||||||||| ||||    
T  8171164 ccttcctcttaaacttttccagttctgaacgagaaattctgaatgagaaaagctgatatttatagtgaaagtttctacct 8171243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 140 - 209
Target Start/End: Complemental strand, 27853558 - 27853488
Alignment:
Q  140 tctgaacgagaaattatgaatgaggaaggcggtatttacagggaaagtttccac-ctaacttagggtaaaa 209  Q
    |||||| ||||||| ||||||||||| || |||||||||||||| |||||||||  ||||||||| |||||    
T  27853558 tctgaatgagaaataatgaatgaggagggtggtatttacagggagagtttccacattaacttaggctaaaa 27853488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 116 - 189
Target Start/End: Complemental strand, 13907236 - 13907164
Alignment:
Q  116 gccttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaaggcggtatttacagggaaagttt 189  Q
    ||||||||||||||| ||| | |||||||| |||||||| ||||||||||| | ||||||||  ||||||||||    
T  13907236 gccttcctcttgaaccgcttc-gttctgaatgagaaattgtgaatgaggaatgtggtatttatggggaaagttt 13907164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 342 - 391
Target Start/End: Complemental strand, 18735612 - 18735563
Alignment:
Q  342 gttttcttcaatgtaagatgtctaggaacttgggaacataattcgtccct 391  Q
    |||| |||||||||||||||||| |||||||||||||| ||||| |||||    
T  18735612 gtttgcttcaatgtaagatgtcttggaacttgggaacagaattcctccct 18735563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 116 - 193
Target Start/End: Complemental strand, 18735930 - 18735853
Alignment:
Q  116 gccttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaaggcggtatttacagggaaagtttccac 193  Q
    |||||||| ||||||||||||| ||   || || |||||||||||||||||||| |||| || |||||| ||||||||    
T  18735930 gccttcctattgaactgctccaatttgaaatgacaaattatgaatgaggaaggcagtatatatagggaacgtttccac 18735853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 90
Target Start/End: Original strand, 19169449 - 19169519
Alignment:
Q  18 ttagttacacatggtaactaaagacaagatacaaaaagataaaaacataccctagaaaagataggagaagata 90  Q
    |||||||||||||||||||||| ||||  |||  |||||||||||||||||||||||||   |||||||||||    
T  19169449 ttagttacacatggtaactaaa-acaaattac-taaagataaaaacataccctagaaaatcaaggagaagata 19169519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 90
Target Start/End: Complemental strand, 23699172 - 23699104
Alignment:
Q  22 ttacacatggtaactaaagacaagatacaaaaagataaaaacataccctagaaaagataggagaagata 90  Q
    |||||||||||||||||| ||||  ||| ||||||||||||||| || |||||||   |||||||||||    
T  23699172 ttacacatggtaactaaaaacaaattactaaaagataaaaacatgccatagaaaaagaaggagaagata 23699104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 90
Target Start/End: Complemental strand, 23717627 - 23717559
Alignment:
Q  22 ttacacatggtaactaaagacaagatacaaaaagataaaaacataccctagaaaagataggagaagata 90  Q
    |||||||||||||||||| ||||  ||| ||||||||||||||| || |||||||   |||||||||||    
T  23717627 ttacacatggtaactaaaaacaaattactaaaagataaaaacatgccatagaaaaagaaggagaagata 23717559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 90
Target Start/End: Complemental strand, 23736083 - 23736015
Alignment:
Q  22 ttacacatggtaactaaagacaagatacaaaaagataaaaacataccctagaaaagataggagaagata 90  Q
    |||||||||||||||||| ||||  ||| ||||||||||||||| || |||||||   |||||||||||    
T  23736083 ttacacatggtaactaaaaacaaattactaaaagataaaaacatgccatagaaaaagaaggagaagata 23736015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 90
Target Start/End: Complemental strand, 23755134 - 23755062
Alignment:
Q  18 ttagttacacatggtaactaaagacaagatacaaaaagataaaaacataccctagaaaagataggagaagata 90  Q
    |||||||||||||||||||||| ||||  ||  ||||||||||||||| || |||||||   |||||||||||    
T  23755134 ttagttacacatggtaactaaaaacaaattaataaaagataaaaacatgccatagaaaaagaaggagaagata 23755062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 118 - 168
Target Start/End: Complemental strand, 16228954 - 16228904
Alignment:
Q  118 cttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaagg 168  Q
    |||||||||||||| ||| |||||||||| | |||||||||||| ||||||    
T  16228954 cttcctcttgaactactctagttctgaacaaaaaattatgaatgcggaagg 16228904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 18 - 92
Target Start/End: Complemental strand, 20122020 - 20121947
Alignment:
Q  18 ttagttacacatggtaactaaagacaagatacaaaaagataaaaacataccctagaaaagataggagaagataga 92  Q
    ||||||| ||| |||||||||| | || |||| ||| ||||||||||||||||||||||   |||||||||||||    
T  20122020 ttagttatacaaggtaactaaaaataaaatactaaa-gataaaaacataccctagaaaatcaaggagaagataga 20121947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 18 - 76
Target Start/End: Original strand, 20886194 - 20886252
Alignment:
Q  18 ttagttacacatggtaactaaagacaagatacaaaaagataaaaacataccctagaaaa 76  Q
    |||||||| ||||||||||||||||||  |||||||  |  ||||||||||||||||||    
T  20886194 ttagttactcatggtaactaaagacaaattacaaaagaaataaaacataccctagaaaa 20886252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 177
Target Start/End: Original strand, 6291867 - 6291927
Alignment:
Q  116 gccttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaaggcggtattta 177  Q
    |||||||| |||||| ||| || ||||||| |||||||||||||||||||| | ||||||||    
T  6291867 gccttccttttgaaccgcttca-ttctgaatgagaaattatgaatgaggaatgtggtattta 6291927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 52 - 93
Target Start/End: Complemental strand, 8882125 - 8882084
Alignment:
Q  52 aaagataaaaacataccctagaaaagataggagaagatagaa 93  Q
    |||||||||||||||||||||||||   ||||||||||||||    
T  8882125 aaagataaaaacataccctagaaaatcaaggagaagatagaa 8882084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 59
Target Start/End: Original strand, 16222433 - 16222474
Alignment:
Q  18 ttagttacacatggtaactaaagacaagatacaaaaagataa 59  Q
    |||| ||| ||||||||| |||||||||||||||||||||||    
T  16222433 ttagatactcatggtaacaaaagacaagatacaaaaagataa 16222474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 340 - 385
Target Start/End: Original strand, 17134845 - 17134889
Alignment:
Q  340 gtgttttcttcaatgtaagatgtctaggaacttgggaacataattc 385  Q
    ||||||||||||||||||||||||| || ||||||||||| |||||    
T  17134845 gtgttttcttcaatgtaagatgtcttgg-acttgggaacagaattc 17134889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 340 - 384
Target Start/End: Complemental strand, 19388194 - 19388150
Alignment:
Q  340 gtgttttcttcaatgtaagatgtctaggaacttgggaacataatt 384  Q
    |||||| ||||||||| |||||||| ||||| |||||||||||||    
T  19388194 gtgtttgcttcaatgttagatgtcttggaacatgggaacataatt 19388150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 148; Significance: 5e-78; HSPs: 64)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 18 - 232
Target Start/End: Original strand, 19154287 - 19154501
Alignment:
Q  18 ttagttacacatggtaactaaagacaagatacaaaaagataaaaacataccctagaaaagataggagaagatagaactcctcc-tagtctcctagaatcg 116  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||| ||||||||| ||||||||| ||| ||||||||||||    
T  19154287 ttagttacacatggtaactaaagacatgatacaaaaagataaaaacataccctataaaagatatgagaagataaaactcctccctag-ctcctagaatcg 19154385  T
Q  117 ccttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaaggcggtatttacagggaaagtttccacctaacttagggtaaaagtatggg 216  Q
    ||||||||||||||||||| |||||| |||||||||||||||||||||||||| ||||||| ||||||| ||||||||| |||| || ||||||||||||    
T  19154386 ccttcctcttgaactgctctagttctcaacgagaaattatgaatgaggaaggcagtatttatagggaaattttccacctgacttgggctaaaagtatggg 19154485  T
Q  217 ttttccaggggtgaaa 232  Q
    ||||||||||| ||||    
T  19154486 ttttccaggggagaaa 19154501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 18 - 232
Target Start/End: Original strand, 20753686 - 20753900
Alignment:
Q  18 ttagttacacatggtaactaaagacaagatacaaaaagataaaaacataccctagaaaagataggagaagatagaactcctcc-tagtctcctagaatcg 116  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||| ||||||||| ||||||||| ||| ||||||||||||    
T  20753686 ttagttacacatggtaactaaagacatgatacaaaaagataaaaacataccctataaaagatatgagaagataaaactcctccctag-ctcctagaatcg 20753784  T
Q  117 ccttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaaggcggtatttacagggaaagtttccacctaacttagggtaaaagtatggg 216  Q
    ||||||||||||||||||| |||||| |||||||||||||||||||||||||| ||||||| ||||||| ||||||||| |||| || ||||||||||||    
T  20753785 ccttcctcttgaactgctctagttctcaacgagaaattatgaatgaggaaggcagtatttatagggaaattttccacctgacttgggctaaaagtatggg 20753884  T
Q  217 ttttccaggggtgaaa 232  Q
    ||||||||||| ||||    
T  20753885 ttttccaggggagaaa 20753900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 19 - 209
Target Start/End: Complemental strand, 18202242 - 18202053
Alignment:
Q  19 tagttacacatggtaactaaagacaagatacaaaaagataaaaacataccctagaaaagataggagaagatagaactcctcctagtctcctagaatcgcc 118  Q
    |||||||||||| ||||||| ||||| ||||||||||||||||||||||||||||||||||| ||||||||| |||||||||| | |||||| ||||| |    
T  18202242 tagttacacatgataactaa-gacaaaatacaaaaagataaaaacataccctagaaaagataagagaagataaaactcctccttggctcctaaaatcgtc 18202144  T
Q  119 ttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaaggcggtatttacagggaaagtttccacctaacttagggtaaaa 209  Q
    ||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| | |||||||||||||||||||| || |||||    
T  18202143 ttcctcttgaactgctccagttctgaatgagaaattgtgaatgaggaaggcggtatttataaggaaagtttccacctaacttgggctaaaa 18202053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 18 - 221
Target Start/End: Original strand, 1585608 - 1585810
Alignment:
Q  18 ttagttacacatggtaactaaagacaagatacaaaaagataaaaacataccctagaaaagataggagaagatagaactcctcctagtctcctagaatcgc 117  Q
    |||||||| |||||||||||||||| |||||||||||||||||| |||||| ||||||||||| ||||| ||| |||| ||||| | |||||||||||||    
T  1585608 ttagttactcatggtaactaaagacgagatacaaaaagataaaa-cataccatagaaaagataagagaatatataactgctccttgactcctagaatcgc 1585706  T
Q  118 cttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaaggcggtatttacagggaaagtttccacctaacttagggtaaaagtatgggt 217  Q
    ||||||||||||||  || ||||||||||||||||||||||||||||||||| || |||| |||||||| ||| ||||||||| || ||||| ||||||     
T  1585707 cttcctcttgaactattctagttctgaacgagaaattatgaatgaggaaggcagtgtttatagggaaagcttcgacctaacttgggctaaaaatatgggc 1585806  T
Q  218 tttc 221  Q
    ||||    
T  1585807 tttc 1585810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 19 - 200
Target Start/End: Original strand, 3735666 - 3735847
Alignment:
Q  19 tagttacacatggtaactaaagacaagatacaaaaagataaaaacataccctagaaaagataggagaagatagaactcctcctagtctcctagaatcgcc 118  Q
    |||||||||||| |||||||    || ||||| ||||||||||||||||| ||||||||||||||||||||| |||| ||||| | ||||||||||| ||    
T  3735666 tagttacacatgataactaagagtaaaatacagaaagataaaaacataccttagaaaagataggagaagataaaacttctccttggctcctagaatcacc 3735765  T
Q  119 ttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaaggcggtatttacagggaaagtttccacctaactt 200  Q
    |||||||||||||||| ||||||||| ||||||||||||||||||||||| |||||||| ||||||||||||| ||||||||    
T  3735766 ttcctcttgaactgctgcagttctgagcgagaaattatgaatgaggaaggtggtatttatagggaaagtttcctcctaactt 3735847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 19 - 209
Target Start/End: Complemental strand, 3190118 - 3189927
Alignment:
Q  19 tagttacacatggtaactaaagacaagatacaaaaagataaaaacataccctagaaaagata-ggagaagatagaactcctcct-agtctcctagaatcg 116  Q
    |||||||||||| ||||||| ||||| ||||| |||||||||||||||||||| |||||||| || ||||||||||||| |||| |  ||||||||||||    
T  3190118 tagttacacatgataactaa-gacaaaatacataaagataaaaacataccctataaaagataaggggaagatagaactcttcctcaagctcctagaatcg 3190020  T
Q  117 ccttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaaggcggtatttacagggaaagtttccacctaacttagggtaaaa 209  Q
    | ||||||||| | |||||||||||||||| | ||||||||||||||||||||||||| |||||||||||||||||||| ||||||| |||||    
T  3190019 cattcctcttggattgctccagttctgaacaacaaattatgaatgaggaaggcggtatatacagggaaagtttccacctgacttaggctaaaa 3189927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 19 - 200
Target Start/End: Original strand, 4987579 - 4987762
Alignment:
Q  19 tagttacacatggtaactaaagacaaga-tacaaaaagataaaaacataccctagaaaagataggagaagatagaactcctcctagtc-tcctagaatcg 116  Q
    |||||||||||| ||||||| ||||| | ||| ||||||||||||||||| ||||||||||||||||||||||||||||||| | | | ||||| ||||     
T  4987579 tagttacacatgataactaa-gacaaaaatactaaaagataaaaacatactctagaaaagataggagaagatagaactcctcattggcttcctataatca 4987677  T
Q  117 ccttcctcttgaactgctcca-gttctgaacgagaaattatgaatgaggaaggcggtatttacagggaaagtttccacctaactt 200  Q
    || |||||||||||||||||| ||| |||||||||||||  ||||||||||||||||||||| ||| ||||||||||||||||||    
T  4987678 ccctcctcttgaactgctccatgttatgaacgagaaattgggaatgaggaaggcggtatttataggtaaagtttccacctaactt 4987762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 19 - 200
Target Start/End: Original strand, 4991677 - 4991860
Alignment:
Q  19 tagttacacatggtaactaaagacaaga-tacaaaaagataaaaacataccctagaaaagataggagaagatagaactcctcctagtc-tcctagaatcg 116  Q
    |||||||||||| ||||||| ||||| | ||| ||||||||||||||||| ||||||||||||||||||||||||||||||| | | | ||||| ||||     
T  4991677 tagttacacatgataactaa-gacaaaaatactaaaagataaaaacatactctagaaaagataggagaagatagaactcctcattggcttcctataatca 4991775  T
Q  117 ccttcctcttgaactgctcca-gttctgaacgagaaattatgaatgaggaaggcggtatttacagggaaagtttccacctaactt 200  Q
    || |||||||||||||||||| ||| |||||||||||||  ||||||||||||||||||||| ||| ||||||||||||||||||    
T  4991776 ccctcctcttgaactgctccatgttatgaacgagaaattgggaatgaggaaggcggtatttataggtaaagtttccacctaactt 4991860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 19 - 163
Target Start/End: Complemental strand, 8310525 - 8310382
Alignment:
Q  19 tagttacacatggtaactaaagacaagatacaaaaagataaaaacataccctagaaaagataggagaagatagaactcctcctagtctcctagaatcgcc 118  Q
    |||||||||||| ||||||| | ||| |||||||||||||||||| ||| ||||||||||||||||||||||||| ||||||| | |||||||||||| |    
T  8310525 tagttacacatgataactaagg-caaaatacaaaaagataaaaacctactctagaaaagataggagaagatagaaatcctccttggctcctagaatcgtc 8310427  T
Q  119 ttcctcttgaactgctccagttctgaacgagaaattatgaatgag 163  Q
    ||||| |||||||||||||||||||||||||||||| ||||||||    
T  8310426 ttcctattgaactgctccagttctgaacgagaaattgtgaatgag 8310382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 19 - 209
Target Start/End: Complemental strand, 10585961 - 10585770
Alignment:
Q  19 tagttacacatggtaactaaagacaaga-tacaaaaagataaaaacataccctagaaaagataggagaagatagaactcctcctagtct-cctagaatcg 116  Q
    |||||||||||| ||||||| ||||| | ||  ||||||||||||||||||||||||||||||| |||||||| ||||  |||| | || |||| || |     
T  10585961 tagttacacatgataactaa-gacaaaaataataaaagataaaaacataccctagaaaagatagtagaagatataacttatccttggcttcctataacca 10585863  T
Q  117 ccttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaaggcggtatttacagggaaagtttccacctaacttagggtaaaa 209  Q
    ||||||||||||||| ||| ||||||||| |||| ||| ||||||||||| |||||||||| | |||| |||| |||||||||| || |||||    
T  10585862 ccttcctcttgaacttctctagttctgaaagagatattgtgaatgaggaatgcggtatttataaggaacgttttcacctaacttgggctaaaa 10585770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 19 - 200
Target Start/End: Original strand, 6014573 - 6014756
Alignment:
Q  19 tagttacacatggtaactaaagacaagatacaaaaagataaaaacataccctagaaaa-gatag-gagaagatagaactcctcctagt-ctcctagaatc 115  Q
    |||||||||||  ||||||| ||||| |||||||||||||||||||||| || ||||| ||||  ||||||||||||||||||| |   |||||||||||    
T  6014573 tagttacacatcataactaa-gacaaaatacaaaaagataaaaacatacgctggaaaaagataaagagaagatagaactcctccaaaagctcctagaatc 6014671  T
Q  116 gccttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaaggcggtatttacagggaaagtttccacctaactt 200  Q
     ||||||||||||||| || ||||  ||| ||||||||||| ||||| ||||| | |||||| ||||||| ||||||||| ||||    
T  6014672 accttcctcttgaacttcttcagtattgaccgagaaattatcaatgaagaaggtgatatttatagggaaattttccacctgactt 6014756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 288 - 384
Target Start/End: Original strand, 19154537 - 19154633
Alignment:
Q  288 gcgcttcagtgtaaattcagtgctgaaatgcctgtcttcttcgctcgtttttgtgttttcttcaatgtaagatgtctaggaacttgggaacataatt 384  Q
    ||||||||||||||||||||| |||||||||| ||||||||||| | |||| |||||||||||||||||||||||||  ||||||||||||| ||||    
T  19154537 gcgcttcagtgtaaattcagtcctgaaatgccagtcttcttcgcccattttggtgttttcttcaatgtaagatgtcttagaacttgggaacagaatt 19154633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 288 - 384
Target Start/End: Original strand, 20753936 - 20754032
Alignment:
Q  288 gcgcttcagtgtaaattcagtgctgaaatgcctgtcttcttcgctcgtttttgtgttttcttcaatgtaagatgtctaggaacttgggaacataatt 384  Q
    ||||||||||||||||||||| |||||||||| ||||||||||| | |||| |||||||||||||||||||||||||  ||||||||||||| ||||    
T  20753936 gcgcttcagtgtaaattcagtcctgaaatgccagtcttcttcgcccattttggtgttttcttcaatgtaagatgtcttagaacttgggaacagaatt 20754032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 19 - 90
Target Start/End: Complemental strand, 2573739 - 2573668
Alignment:
Q  19 tagttacacatggtaactaaagacaagatacaaaaagataaaaacataccctagaaaagataggagaagata 90  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||    
T  2573739 tagttacacatggtaactaaagacaagatacaaaaagataaaaacataccttagaaaagataggagtagata 2573668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 18 - 169
Target Start/End: Complemental strand, 17190240 - 17190090
Alignment:
Q  18 ttagttacacatggtaactaaagacaagatacaaaaagataaaaacataccctagaaaagataggagaagatagaa-ctcctcctagtctcctagaatcg 116  Q
    |||||||||||||| ||||||| |||||||| |||| |||||||||||||||||||||    | |||||||||||| |||  || |  |||| | | | |    
T  17190240 ttagttacacatggcaactaaaaacaagatataaaa-gataaaaacataccctagaaagttaatgagaagatagaaactctcccgaagctccaa-agtag 17190143  T
Q  117 ccttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaaggc 169  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  17190142 ccttcctcttgaactgctccagttctgaacgagaaattctgaatgaggaaggc 17190090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 19 - 90
Target Start/End: Complemental strand, 2570325 - 2570254
Alignment:
Q  19 tagttacacatggtaactaaagacaagatacaaaaagataaaaacataccctagaaaagataggagaagata 90  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| |||||    
T  2570325 tagttacacatggtaactaaagacaagatacaaaaagataaaaacataccttagaaaacataggagtagata 2570254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 105 - 195
Target Start/End: Original strand, 7398756 - 7398847
Alignment:
Q  105 ctcctagaatc-gccttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaaggcggtatttacagggaaagtttccacct 195  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||  |||| ||| ||| |||||||||||||    
T  7398756 ctcctagaatccgccttcctcttgaactgctccagttctgaacgagaaatgatgaatgaggaagttggtacttataggaaaagtttccacct 7398847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 108 - 193
Target Start/End: Original strand, 17830754 - 17830839
Alignment:
Q  108 ctagaatcgccttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaaggcggtatttacagggaaagtttccac 193  Q
    ||||||||| | ||||||||||||||||||||||||||| |||||||||||||||||||||  ||||||| || ||||| ||||||    
T  17830754 ctagaatcgtcctcctcttgaactgctccagttctgaacaagaaattatgaatgaggaaggttgtatttatagtgaaagattccac 17830839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 18 - 169
Target Start/End: Complemental strand, 39272195 - 39272045
Alignment:
Q  18 ttagttacacatggtaactaaagacaagatacaaaaagataaaaacataccctagaaaagataggagaagatagaa-ctcctcctagtctcctagaatcg 116  Q
    |||||||||||||||||||||| ||||  ||| ||| ||||||||||||||||||||||   |||||| ||||||| |||  || |  |||| | | | |    
T  39272195 ttagttacacatggtaactaaaaacaaattactaaa-gataaaaacataccctagaaaatcaaggagatgatagaaactctcccgaagctccaa-agttg 39272098  T
Q  117 ccttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaaggc 169  Q
    |||||||||||||||||  ||||||||||||||||||| ||||||||||||||    
T  39272097 ccttcctcttgaactgccacagttctgaacgagaaattctgaatgaggaaggc 39272045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 18 - 171
Target Start/End: Complemental strand, 16057945 - 16057793
Alignment:
Q  18 ttagttacacatggtaactaaagacaagatacaaaaagataaaaacataccctagaaaagataggagaagatag-aactc-ctcctagtctcctagaatc 115  Q
    |||||||||||||||||||||| |||||||||  |||||||||||||||||| ||||||   |||||||||||| ||||| |||  || |||| | | |     
T  16057945 ttagttacacatggtaactaaaaacaagatac-taaagataaaaacatacccgagaaaatcaaggagaagatagaaactctctcgaag-ctcc-aaagta 16057849  T
Q  116 gccttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaaggcgg 171  Q
    || ||||||||||||||||| ||||||||||||||| || || |||||||||||||    
T  16057848 gcattcctcttgaactgctctagttctgaacgagaatttctggatgaggaaggcgg 16057793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 17 - 167
Target Start/End: Original strand, 9134161 - 9134310
Alignment:
Q  17 attagttacacatggtaactaaagacaagatacaaaaagataaaaacataccctagaaaagataggagaagatag-aactcctcctagtctcctagaatc 115  Q
    |||||||| |||||||||||||| ||||  ||| ||| ||||||||||||| ||||||||   |||||||||||| ||||||||  |  || |||||||     
T  9134161 attagttatacatggtaactaaaaacaaattactaaa-gataaaaacatacgctagaaaatcaaggagaagatagaaactcctcggaagct-ctagaatt 9134258  T
Q  116 gccttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaag 167  Q
     |||| |||||||||||||||||||||  ||||||| || ||||||||||||    
T  9134259 tcctttctcttgaactgctccagttctatacgagaatttttgaatgaggaag 9134310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 307 - 385
Target Start/End: Original strand, 1588957 - 1589035
Alignment:
Q  307 gtgctgaaatgcctgtcttcttcgctcgtttttgtgttttcttcaatgtaagatgtctaggaacttgggaacataattc 385  Q
    |||||||||| ||||| |||||||||  | |  ||||||||||||||||||||||||| ||||||||||||||||||||    
T  1588957 gtgctgaaattcctgttttcttcgcttttataggtgttttcttcaatgtaagatgtcttggaacttgggaacataattc 1589035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 307 - 391
Target Start/End: Complemental strand, 3189715 - 3189631
Alignment:
Q  307 gtgctgaaatgcctgtcttcttcgctcgtttttgtgttttcttcaatgtaagatgtctaggaacttgggaacataattcgtccct 391  Q
    ||||||||||| |||| ||||| ||  |||   ||||||||||||||||||||||||| |||||||||||||||||||| |||||    
T  3189715 gtgctgaaatgtctgttttctttgcatgttgaagtgttttcttcaatgtaagatgtcttggaacttgggaacataattcatccct 3189631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 116 - 168
Target Start/End: Complemental strand, 13288346 - 13288294
Alignment:
Q  116 gccttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaagg 168  Q
    ||||||||||||||||||||||||||||||||||||||| | |||||||||||    
T  13288346 gccttcctcttgaactgctccagttctgaacgagaaattctcaatgaggaagg 13288294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 116 - 195
Target Start/End: Complemental strand, 15171419 - 15171340
Alignment:
Q  116 gccttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaaggcggtatttacagggaaagtttccacct 195  Q
    ||||||| |||||||||||||| || |||||||||||| ||||||||  ||| ||||||||| ||||||||||| |||||    
T  15171419 gccttccacttgaactgctccaattatgaacgagaaataatgaatgattaagccggtatttatagggaaagtttacacct 15171340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 167
Target Start/End: Complemental strand, 13263781 - 13263633
Alignment:
Q  18 ttagttacacatggtaactaaagacaagatacaaaaagataaaaacataccctagaaaagataggagaagatag-aactcctcctagtctcctagaatcg 116  Q
    |||||||||||||||||||||| ||||  ||| ||| |||||||||||||||| |||||   |||||||||||| |||||  || |  |||| | | ||     
T  13263781 ttagttacacatggtaactaaaaacaaattactaaa-gataaaaacatacccttgaaaatcaaggagaagatagaaactctcccgaagctcc-aaagtca 13263684  T
Q  117 ccttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaag 167  Q
    ||||||||||||||||||  |||||| ||||||| ||| ||||||||||||    
T  13263683 ccttcctcttgaactgctatagttctaaacgagatattctgaatgaggaag 13263633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 112 - 209
Target Start/End: Original strand, 1588657 - 1588754
Alignment:
Q  112 aatcgccttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaaggcggtatttacagggaaagtttccacctaacttagggtaaaa 209  Q
    |||||||||| |||| || |||| ||||| ||||||||||||||| ||| ||||||||| |||||| ||||||| ||| ||||| |||| || |||||    
T  1588657 aatcgccttcgtcttaaattgctacagttttgaacgagaaattataaattaggaaggcgttatttatagggaaatttttcacctgacttgggctaaaa 1588754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 18 - 196
Target Start/End: Original strand, 6007041 - 6007222
Alignment:
Q  18 ttagttacacatggtaactaaagacaagatacaaaaagataaaaacataccctagaaaagataggagaagatagaa---ctcctcctagt-ctcctagaa 113  Q
    |||||||||||||||||||||||||||  ||   ||||||||||||||||| |||| ||   | ||||||||||||   ||||||| |   ||| |||||    
T  6007041 ttagttacacatggtaactaaagacaaattatttaaagataaaaacatacc-tagataaacaatgagaagatagaaaaactcctcccaaagctcatagaa 6007139  T
Q  114 tcgccttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaaggcggtatttacagggaaagtttccaccta 196  Q
    || ||||||| ||||| |||||| | ||| ||||||||||||||| |||||| | || |||||| ||| | |||||| |||||    
T  6007140 tcaccttcctgttgaaatgctccggctctaaacgagaaattatgattgaggatgacgatatttataggaagagtttcaaccta 6007222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 116 - 168
Target Start/End: Complemental strand, 8318117 - 8318065
Alignment:
Q  116 gccttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaagg 168  Q
    ||||||||||||||||||| |||| |||||||||||||| |||||||||||||    
T  8318117 gccttcctcttgaactgctacagtactgaacgagaaattctgaatgaggaagg 8318065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 18 - 169
Target Start/End: Complemental strand, 8978033 - 8977883
Alignment:
Q  18 ttagttacacatggtaactaaagacaagatacaaaaagataaaaacataccctagaaaagataggagaagatagaactcctcct-agtctcctagaatcg 116  Q
    |||||||||||||||||||||| | ||  |||  |||||||||||||||||||||||||   ||||||||||||||   ||| | |  |||| | | | |    
T  8978033 ttagttacacatggtaactaaaaaaaaattac-taaagataaaaacataccctagaaaatcaaggagaagatagaaactctcttgaagctcc-aaagttg 8977936  T
Q  117 ccttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaaggc 169  Q
    ||||||||||||||||   |||||||||||||||| || ||||||||||||||    
T  8977935 ccttcctcttgaactgtcacagttctgaacgagaatttctgaatgaggaaggc 8977883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 17 - 167
Target Start/End: Original strand, 12330425 - 12330574
Alignment:
Q  17 attagttacacatggtaactaaagacaagatacaaaaagataaaaacataccctagaaaagataggagaagatag-aactcctcctagtctcctagaatc 115  Q
    ||||||||||||||||||||||| | ||  |||  ||||||||||||||||| |||||||   |||||||||||| ||||||||  |  || |||||||     
T  12330425 attagttacacatggtaactaaaaataaattac-taaagataaaaacataccgtagaaaatcaaggagaagatagaaactcctcggaagct-ctagaatt 12330522  T
Q  116 gccttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaag 167  Q
    || ||||||||||||| |  || |||||||||||||||| | |||| |||||    
T  12330523 gctttcctcttgaactcccacaattctgaacgagaaattctcaatgtggaag 12330574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 115 - 177
Target Start/End: Original strand, 141256 - 141318
Alignment:
Q  115 cgccttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaaggcggtattta 177  Q
    ||||||||| || || || |||||||||||||||||||| ||||||||||||||| |||||||    
T  141256 cgccttccttttcaattgttccagttctgaacgagaaataatgaatgaggaaggcagtattta 141318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 116 - 166
Target Start/End: Original strand, 2565606 - 2565656
Alignment:
Q  116 gccttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaa 166  Q
    |||||| |||||||||||  |||||||||||||||||||||||||||||||    
T  2565606 gccttcatcttgaactgccacagttctgaacgagaaattatgaatgaggaa 2565656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 116 - 169
Target Start/End: Complemental strand, 8053038 - 8052985
Alignment:
Q  116 gccttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaaggc 169  Q
    ||||||||||||||||||  |||||||||||||||||||  |||||||||||||    
T  8053038 gccttcctcttgaactgccacagttctgaacgagaaattcagaatgaggaaggc 8052985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 340 - 385
Target Start/End: Complemental strand, 18201832 - 18201787
Alignment:
Q  340 gtgttttcttcaatgtaagatgtctaggaacttgggaacataattc 385  Q
    ||||||||||||||||||||||||| |||||||||||||| |||||    
T  18201832 gtgttttcttcaatgtaagatgtcttggaacttgggaacagaattc 18201787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 343 - 391
Target Start/End: Original strand, 1585949 - 1585997
Alignment:
Q  343 ttttcttcaatgtaagatgtctaggaacttgggaacataattcgtccct 391  Q
    |||||||||||||||||||||| | |||||||||||||||||| |||||    
T  1585949 ttttcttcaatgtaagatgtcttgaaacttgggaacataattcctccct 1585997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 17 - 167
Target Start/End: Original strand, 4820256 - 4820404
Alignment:
Q  17 attagttacacatggtaactaaagacaagatacaaaaagataaaaacataccctagaaaagataggagaagatagaa-ctcctcctagtctcctagaatc 115  Q
    |||||||||||||||||| |||| ||||  ||| ||| ||||||||||| ||||| |||  | |||||||||||||| ||||||| | |||| | ||||     
T  4820256 attagttacacatggtaaataaaaacaaattactaaa-gataaaaacatgccctaaaaatca-aggagaagatagaaactcctccgaatctc-tggaatt 4820352  T
Q  116 gccttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaag 167  Q
    ||||||||| | |||| |||  ||||| || |||||||| ||||||||||||    
T  4820353 gccttcctcgtcaactactctggttcttaatgagaaattctgaatgaggaag 4820404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 18 - 93
Target Start/End: Complemental strand, 13756171 - 13756097
Alignment:
Q  18 ttagttacacatggtaactaaagacaagatacaaaaagataaaaacataccctagaaaagataggagaagatagaa 93  Q
    |||||||||||||||||||||| || ||||    |||||||||||||||||||||||||   ||||||||||||||    
T  13756171 ttagttacacatggtaactaaaaac-agattactaaagataaaaacataccctagaaaatcaaggagaagatagaa 13756097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 52 - 95
Target Start/End: Original strand, 15870715 - 15870758
Alignment:
Q  52 aaagataaaaacataccctagaaaagataggagaagatagaact 95  Q
    ||||||||||| ||||||||||||||| ||||||||||||||||    
T  15870715 aaagataaaaatataccctagaaaagaaaggagaagatagaact 15870758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 116 - 167
Target Start/End: Original strand, 25692246 - 25692297
Alignment:
Q  116 gccttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaag 167  Q
    ||||||||||||||||||  |||||||||| |||||||||||||||| ||||    
T  25692246 gccttcctcttgaactgccacagttctgaatgagaaattatgaatgatgaag 25692297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 76
Target Start/End: Original strand, 13278528 - 13278585
Alignment:
Q  18 ttagttacacatggtaactaaagacaagatacaaaaagataaaaacataccctagaaaa 76  Q
    |||||||||||||||||||||| ||||  ||| ||| ||||||||||||||||||||||    
T  13278528 ttagttacacatggtaactaaaaacaaattactaaa-gataaaaacataccctagaaaa 13278585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 116 - 166
Target Start/End: Complemental strand, 18362642 - 18362592
Alignment:
Q  116 gccttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaa 166  Q
    ||||| ||||||||||||  ||||||||||||||||||| |||||||||||    
T  18362642 gcctttctcttgaactgccacagttctgaacgagaaattttgaatgaggaa 18362592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 139 - 192
Target Start/End: Complemental strand, 15611616 - 15611563
Alignment:
Q  139 ttctgaacgagaaattatgaatgaggaaggcggtatttacagggaaagtttcca 192  Q
    ||||||| |||||| ||||||||||||| |||||||||| ||||| ||||||||    
T  15611616 ttctgaatgagaaactatgaatgaggaatgcggtatttatagggagagtttcca 15611563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 116 - 169
Target Start/End: Original strand, 17078217 - 17078270
Alignment:
Q  116 gccttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaaggc 169  Q
    ||||||||||||||||||  | |||||||||| ||||||||||| |||||||||    
T  17078217 gccttcctcttgaactgccacggttctgaacgtgaaattatgaaggaggaaggc 17078270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 118 - 175
Target Start/End: Original strand, 21502344 - 21502401
Alignment:
Q  118 cttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaaggcggtatt 175  Q
    ||||||||||||||||  ||||| |||||||||| |||||||||||||| | ||||||    
T  21502344 cttcctcttgaactgcctcagttttgaacgagaatttatgaatgaggaatgtggtatt 21502401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 307 - 391
Target Start/End: Original strand, 3736058 - 3736142
Alignment:
Q  307 gtgctgaaatgcctgtcttcttcgctcgtttttgtgttttcttcaatgtaagatgtctaggaacttgggaacataattcgtccct 391  Q
    ||||||||||| |||| ||||| ||  |||   ||||||||||||||||||||||||| |||| ||| ||||| ||||| |||||    
T  3736058 gtgctgaaatgtctgttttctttgcctgttgaggtgttttcttcaatgtaagatgtcttggaaattgagaacagaattcctccct 3736142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 340 - 384
Target Start/End: Original strand, 10418309 - 10418353
Alignment:
Q  340 gtgttttcttcaatgtaagatgtctaggaacttgggaacataatt 384  Q
    |||||| ||||| |||||||||||| |||||||||||||||||||    
T  10418309 gtgtttgcttcagtgtaagatgtcttggaacttgggaacataatt 10418353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 169
Target Start/End: Original strand, 23297721 - 23297871
Alignment:
Q  18 ttagttacacatggtaactaaagacaagatacaaaaagataaaaacataccctagaaaagataggagaagatagaactcctcct-agtctcctagaatcg 116  Q
    |||||||||||||||||||||| ||||  |||  |||||||||||||||| ||||| ||   ||||||||||||||   ||||| |  |||| | | | |    
T  23297721 ttagttacacatggtaactaaaaacaaattac-taaagataaaaacatacactagagaatcaaggagaagatagaaactctcctgaagctcc-aaagttg 23297818  T
Q  117 ccttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaaggc 169  Q
    | |||||||||||||||  || || ||||||||||||| || |||||||||||    
T  23297819 ctttcctcttgaactgccacaattttgaacgagaaattctgcatgaggaaggc 23297871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 137 - 192
Target Start/End: Original strand, 5531210 - 5531265
Alignment:
Q  137 agttctgaacgagaaattatgaatgaggaaggcggtatttacagggaaagtttcca 192  Q
    ||||||||| |||||||| |||||||||||||||| ||||| |  |||||||||||    
T  5531210 agttctgaatgagaaattgtgaatgaggaaggcggcatttataaagaaagtttcca 5531265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 150 - 197
Target Start/End: Complemental strand, 6039918 - 6039871
Alignment:
Q  150 aaattatgaatgaggaaggcggtatttacagggaaagtttccacctaa 197  Q
    |||| ||||||||||||| ||||||||| ||||||| |||||||||||    
T  6039918 aaataatgaatgaggaagacggtatttatagggaaaatttccacctaa 6039871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 18 - 73
Target Start/End: Original strand, 9917535 - 9917590
Alignment:
Q  18 ttagttacacatggtaactaaagacaagatacaaaaagataaaaacataccctaga 73  Q
    ||||| |||||||||||||||||||||  |||||||| |  |||||||||||||||    
T  9917535 ttagtcacacatggtaactaaagacaaattacaaaaaaaataaaacataccctaga 9917590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 18 - 73
Target Start/End: Original strand, 9925447 - 9925502
Alignment:
Q  18 ttagttacacatggtaactaaagacaagatacaaaaagataaaaacataccctaga 73  Q
    ||||| |||||||||||||||||||||  |||||||| |  |||||||||||||||    
T  9925447 ttagtcacacatggtaactaaagacaaattacaaaaaaaataaaacataccctaga 9925502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 118 - 169
Target Start/End: Complemental strand, 13756073 - 13756022
Alignment:
Q  118 cttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaaggc 169  Q
    ||||||||||||||||  ||||||  |||||||| |||||||||||||||||    
T  13756073 cttcctcttgaactgccacagttcaaaacgagaatttatgaatgaggaaggc 13756022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 17 - 76
Target Start/End: Complemental strand, 18362740 - 18362682
Alignment:
Q  17 attagttacacatggtaactaaagacaagatacaaaaagataaaaacataccctagaaaa 76  Q
    ||||||||||||||||||||||| ||||  |||  |||||||||||||||||||| ||||    
T  18362740 attagttacacatggtaactaaaaacaaattac-taaagataaaaacataccctataaaa 18362682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 340 - 391
Target Start/End: Original strand, 23897015 - 23897066
Alignment:
Q  340 gtgttttcttcaatgtaagatgtctaggaacttgggaacataattcgtccct 391  Q
    ||||||||||||||||||||| | | |||||||||||||| ||||| |||||    
T  23897015 gtgttttcttcaatgtaagatattttggaacttgggaacagaattcctccct 23897066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 22 - 76
Target Start/End: Original strand, 2565513 - 2565566
Alignment:
Q  22 ttacacatggtaactaaagacaagatacaaaaagataaaaacataccctagaaaa 76  Q
    |||||||||||||||||| ||||  ||| ||| ||||||||||||||||||||||    
T  2565513 ttacacatggtaactaaaaacaaattacgaaa-gataaaaacataccctagaaaa 2565566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 18 - 76
Target Start/End: Complemental strand, 3586246 - 3586190
Alignment:
Q  18 ttagttacacatggtaactaaagacaagatacaaaaagataaaaacataccctagaaaa 76  Q
    |||||||||||||||||||||| |||| ||||  ||||||||||||||| |||||||||    
T  3586246 ttagttacacatggtaactaaaaacaa-atac-taaagataaaaacatatcctagaaaa 3586190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 117 - 195
Target Start/End: Original strand, 9501448 - 9501525
Alignment:
Q  117 ccttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaaggcggtatttacagggaaagtttccacct 195  Q
    |||||||||||||| ||| | ||| |||| |||||||| ||||||||||| || ||||||| ||| | |||||||||||    
T  9501448 ccttcctcttgaaccgcttc-gttttgaatgagaaattgtgaatgaggaatgcagtatttataggaagagtttccacct 9501525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 340 - 390
Target Start/End: Original strand, 9767537 - 9767587
Alignment:
Q  340 gtgttttcttcaatgtaagatgtctaggaacttgggaacataattcgtccc 390  Q
    ||||||| |||| |||||||||||| ||||||| |||||||||||| ||||    
T  9767537 gtgttttgttcattgtaagatgtcttggaacttaggaacataattcctccc 9767587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 116 - 190
Target Start/End: Complemental strand, 9863356 - 9863283
Alignment:
Q  116 gccttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaaggcggtatttacagggaaagtttc 190  Q
    |||||||||| |||| ||| || || |||| |||||||||||||||||||| | |||||||| ||||| ||||||    
T  9863356 gccttcctctcgaaccgcttca-ttatgaatgagaaattatgaatgaggaatgtggtatttatagggagagtttc 9863283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 139 - 177
Target Start/End: Original strand, 10611221 - 10611259
Alignment:
Q  139 ttctgaacgagaaattatgaatgaggaaggcggtattta 177  Q
    |||||||||||||||| |||||||||||||| |||||||    
T  10611221 ttctgaacgagaaattctgaatgaggaaggctgtattta 10611259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 340 - 384
Target Start/End: Original strand, 1810657 - 1810701
Alignment:
Q  340 gtgttttcttcaatgtaagatgtctaggaacttgggaacataatt 384  Q
    ||||||||||| |  |||||||||| |||||||||||||||||||    
T  1810657 gtgttttcttccacataagatgtcttggaacttgggaacataatt 1810701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 17 - 73
Target Start/End: Complemental strand, 8053143 - 8053088
Alignment:
Q  17 attagttacacatggtaactaaagacaagatacaaaaagataaaaacataccctaga 73  Q
    ||||||||||||||||||||||| ||||  |||  ||||||| ||||||||||||||    
T  8053143 attagttacacatggtaactaaaaacaaattac-taaagatagaaacataccctaga 8053088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 147 - 195
Target Start/End: Original strand, 18467824 - 18467872
Alignment:
Q  147 gagaaattatgaatgaggaaggcggtatttacagggaaagtttccacct 195  Q
    |||||||| || |||||||| |||||||||| ||||| |||||||||||    
T  18467824 gagaaattgtgtatgaggaatgcggtatttatagggagagtttccacct 18467872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 139; Significance: 1e-72; HSPs: 33)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 18 - 216
Target Start/End: Complemental strand, 20828862 - 20828664
Alignment:
Q  18 ttagttacacatggtaactaaagacaagatacaaaaagataaaaacataccctagaaaagataggagaagatagaactcctcctagtctcctagaatcgc 117  Q
    |||||||| |||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| |||||||    
T  20828862 ttagttactcatggtaactaaagattagatacaaaaagataaaaacataccctagaaaagataggagaagatagaactcctccttggctccttgaatcgc 20828763  T
Q  118 cttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaaggcggtatttacagggaaagtttccacctaacttagggtaaaagtatggg 216  Q
    ||||||||||||||| |||||||||||| ||||||||||||||| ||||||| ||||||| ||||||||||||||||| |||| || |||||| |||||    
T  20828762 cttcctcttgaactgatccagttctgaatgagaaattatgaatgtggaaggccgtatttatagggaaagtttccacctgacttgggctaaaagcatggg 20828664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 19 - 200
Target Start/End: Complemental strand, 22350939 - 22350756
Alignment:
Q  19 tagttacacatggtaactaaagacaaga-tacaaaaagataaaaacataccctagaaaagataggagaagatagaactcctcctagtct-cctagaatcg 116  Q
    |||||||||||| ||||||| ||||| | ||| |||||||||||||||||||||||||||||||||||||||| |||||||||| | || |||||||||     
T  22350939 tagttacacatgataactaa-gacaaaaatactaaaagataaaaacataccctagaaaagataggagaagatataactcctccttggcttcctagaatct 22350841  T
Q  117 ccttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaag-gcggtatttacagggaaagtttccacctaactt 200  Q
    |||||||||||||||||||||||||||||||||||| | ||||||||||||   |||||||| ||||||||||||||||||||||    
T  22350840 ccttcctcttgaactgctccagttctgaacgagaaagtgtgaatgaggaagattggtatttatagggaaagtttccacctaactt 22350756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 21 - 197
Target Start/End: Original strand, 5680271 - 5680446
Alignment:
Q  21 gttacacatggtaactaaagacaagatacaaaaagataaaaa-cataccctagaaaagataggagaagatagaactcctcctagtctcctagaatcgcct 119  Q
    |||||||||| ||||||| ||||| |||||| |||||||||| ||||| ||||||||||| | ||||||||||||||||||| | |||||||||||||||    
T  5680271 gttacacatgataactaa-gacaaaatacaacaagataaaaaacatacgctagaaaagatggaagaagatagaactcctccttggctcctagaatcgcct 5680369  T
Q  120 tcctcttgaactgctccagttctgaacgagaaattatgaatgaggaaggcggtatttacagggaaagtttccacctaa 197  Q
    || ||||||||||||||||| || ||||||||||||||| |||||||| | ||| ||| |||||||||| ||||||||    
T  5680370 tcttcttgaactgctccagtcctaaacgagaaattatgattgaggaagacagta-ttatagggaaagttcccacctaa 5680446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 46 - 199
Target Start/End: Complemental strand, 19927531 - 19927377
Alignment:
Q  46 atacaaaaagataaaaacataccctagaaaagataggagaagatagaactcctcctagtctcctagaatcgccttcctcttgaactgctccagttctgaa 145  Q
    |||| |||||||||||||||||| |||||||||||||||||||||||||||||||| | |||||| ||| | ||||||||||||||| || |||||||||    
T  19927531 atactaaaagataaaaacataccttagaaaagataggagaagatagaactcctccttgactcctataatagtcttcctcttgaactgttctagttctgaa 19927432  T
Q  146 cgagaaattatgaatgaggaaggc-ggtatttacagggaaagtttccacctaact 199  Q
    ||||||||| |||||||||||  | | |||||| | |||||||||||||||||||    
T  19927431 cgagaaattgtgaatgaggaaaactgatatttataaggaaagtttccacctaact 19927377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 18 - 192
Target Start/End: Original strand, 14572817 - 14572995
Alignment:
Q  18 ttagttacacatggtaactaaagacaagatacaaaaagataaaaacataccctagaaaagataggagaagatagaa---ctcctcctagt-ctcctagaa 113  Q
    |||||||||||||||||||||| ||||  ||| ||||||||||||||||| ||||||||   ||||||||||||||   ||| ||| |   || ||||||    
T  14572817 ttagttacacatggtaactaaacacaaattactaaaagataaaaacatacactagaaaaacaaggagaagatagaaaaactcttccaaaagcttctagaa 14572916  T
Q  114 tcgccttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaaggcggtatttacagggaaagtttcca 192  Q
    |||||||||||||||||||||| |||| ||||||||||||||||||||||||| || |||| ||  |||| ||||||||    
T  14572917 tcgccttcctcttgaactgctctagttttgaacgagaaattatgaatgaggaatgcagtatctattgggagagtttcca 14572995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 19 - 209
Target Start/End: Original strand, 17277178 - 17277358
Alignment:
Q  19 tagttacacatggtaactaaagacaaga-tacaaaaagataaaaacataccctagaaaagataggagaagatagaactcctcctagtctcctagaatcgc 117  Q
    |||||||||||| ||||||| ||||| | ||| | ||||||||||||||||||| |||||||||   ||||||||||||||||        |||||||||    
T  17277178 tagttacacatgataactaa-gacaaaaatactataagataaaaacataccctaaaaaagatag---aagatagaactcctcc--------tagaatcgc 17277265  T
Q  118 cttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaaggc-ggtatttacagggaaagtttccacctaacttagggtaaaa 209  Q
    ||||||||||||||||||||||| |||||||||| || | ||| |||||||| |||||||  |||||||||||||||| ||||| || |||||    
T  17277266 cttcctcttgaactgctccagttttgaacgagaactttttaataaggaaggctggtatttctagggaaagtttccaccaaacttgggctaaaa 17277358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 286 - 379
Target Start/End: Complemental strand, 20828536 - 20828443
Alignment:
Q  286 aggcgcttcagtgtaaattcagtgctgaaatgcctgtcttcttcgctcgtttttgtgttttcttcaatgtaagatgtctaggaacttgggaaca 379  Q
    ||||||||||||||||||||||||||||||||| ||| |||||||| | |||| ||||||||||||||||||||||| | ||||||||||||||    
T  20828536 aggcgcttcagtgtaaattcagtgctgaaatgcatgttttcttcgcccattttggtgttttcttcaatgtaagatgttttggaacttgggaaca 20828443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 68 - 209
Target Start/End: Complemental strand, 19562718 - 19562578
Alignment:
Q  68 cctagaaaagataggagaagatagaactcctcctagtctcctagaatcgccttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaag 167  Q
    |||||||||||||| ||||||||||||||||| |   |||||| || |||||||  |||||||||||  |||||||||||||||||| ||||||||||||    
T  19562718 cctagaaaagatagaagaagatagaactcctcttttgctcctaaaaccgccttcgccttgaactgctatagttctgaacgagaaatt-tgaatgaggaag 19562620  T
Q  168 gcggtatttacagggaaagtttccacctaacttagggtaaaa 209  Q
    ||| |||||| | ||||||| ||||||| |||| || |||||    
T  19562619 gcgatatttataaggaaagtatccacctgacttgggctaaaa 19562578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 17 - 166
Target Start/End: Original strand, 16730643 - 16730791
Alignment:
Q  17 attagttacacatggtaactaaagacaagatacaaaaagataaaaacataccctagaaaagataggagaagata-gaactcctcctagtctcctagaatc 115  Q
    ||||||||||||||||||||||| |||| ||    |||||| ||||||||||||||||||   |||||||||||  ||||||||| |  || |||||||     
T  16730643 attagttacacatggtaactaaaaacaa-attattaaagattaaaacataccctagaaaatcaaggagaagatataaactcctccgaagct-ctagaatt 16730740  T
Q  116 gccttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaa 166  Q
    ||||||||||||||||||  ||||||||||||||||||| || ||||||||    
T  16730741 gccttcctcttgaactgccacagttctgaacgagaaattctggatgaggaa 16730791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 18 - 169
Target Start/End: Original strand, 17673059 - 17673213
Alignment:
Q  18 ttagttacacatggtaactaaagacaagatacaaaaagataaaaacataccctagaaaagataggagaagatagaa---ctcctcct-agtctcctagaa 113  Q
    ||||||| ||||||| |||||||||||  ||| ||| ||||||| ||||||||| ||||   ||||||||||||||   |||||||  |  |||||||||    
T  17673059 ttagttatacatggttactaaagacaaattactaaa-gataaaaccataccctataaaaacaaggagaagatagaaaaactcctccggaagctcctagaa 17673157  T
Q  114 tcgccttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaaggc 169  Q
    || ||||||||||||||| ||||||||||||| |||||||| ||| ||||||||||    
T  17673158 tcaccttcctcttgaactactccagttctgaatgagaaattgtgattgaggaaggc 17673213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 38 - 200
Target Start/End: Original strand, 19093657 - 19093811
Alignment:
Q  38 aagacaagatacaaaaagataaaaa---cataccctagaaaagataggagaagatagaactcctcctagtctcctagaatcgccttcctcttgaactgct 134  Q
    ||||||| |||||||||||||||||   ||||||||||||||||||| |||| ||| ||||||           ||||||| | || |||||||||||||    
T  19093657 aagacaaaatacaaaaagataaaaaaaacataccctagaaaagatagaagaaaatataactcc-----------tagaatcacatttctcttgaactgct 19093745  T
Q  135 ccagttctgaacgagaaattatgaatgaggaaggcggtatttacagggaaagtttccacctaactt 200  Q
    |||||| |||||||||||||  ||||||  ||| | ||||||| ||||||||||||||||||||||    
T  19093746 ccagttatgaacgagaaattgcgaatgacaaagacagtatttatagggaaagtttccacctaactt 19093811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 17 - 177
Target Start/End: Complemental strand, 8968782 - 8968622
Alignment:
Q  17 attagttacacatggtaactaaagacaagatacaaaaagataaaaacataccctagaaaagataggagaagatagaa-ctcctcctagtctcctagaatc 115  Q
    ||||||||||||||||||||||| ||||  ||| ||| || |||||||||||||||||||    ||||||||||||| ||||||| |  ||| ||||||     
T  8968782 attagttacacatggtaactaaaaacaaattactaaa-gaaaaaaacataccctagaaaatcatggagaagatagaaactcctccgaagctc-tagaatt 8968685  T
Q  116 gccttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaaggc-ggtattta 177  Q
    |||||||| |||||||||  |  |||| ||||||||||| |||||||||||||| ||||||||    
T  8968684 gccttccttttgaactgccacgcttctaaacgagaaattctgaatgaggaaggctggtattta 8968622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 52 - 167
Target Start/End: Complemental strand, 19604512 - 19604395
Alignment:
Q  52 aaagataaaaacataccctagaaaagataggagaagatagaa-ctcctcctagt-ctcctagaatcgccttcctcttgaactgctccagttctgaacgag 149  Q
    ||||||||||| |||||||||||||   |||||||||||||| |||||||   | ||||||||||  |||||||||||||||  ||||||||| |||||     
T  19604512 aaagataaaaagataccctagaaaaataaggagaagatagaaactcctccggatgctcctagaatttccttcctcttgaactagtccagttctaaacgaa 19604413  T
Q  150 aaattatgaatgaggaag 167  Q
    ||||||||||||||||||    
T  19604412 aaattatgaatgaggaag 19604395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 116 - 169
Target Start/End: Original strand, 25095803 - 25095856
Alignment:
Q  116 gccttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaaggc 169  Q
    |||||||||||||||||||  |||||||||||||||||||||||||||||||||    
T  25095803 gccttcctcttgaactgctttagttctgaacgagaaattatgaatgaggaaggc 25095856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 115 - 195
Target Start/End: Original strand, 25024526 - 25024606
Alignment:
Q  115 cgccttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaaggcggtatttacagggaaagtttccacct 195  Q
    ||||||||||||||||| |||   |||||||||||||||||||||||||||||||  |||||| |||||| |||| |||||    
T  25024526 cgccttcctcttgaacttctctcattctgaacgagaaattatgaatgaggaaggcactatttatagggaaggttttcacct 25024606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 137 - 194
Target Start/End: Complemental strand, 9850376 - 9850319
Alignment:
Q  137 agttctgaacgagaaattatgaatgaggaaggcggtatttacagggaaagtttccacc 194  Q
    |||||||||||||||||||||||||||||| | |||||||| ||| ||||||||||||    
T  9850376 agttctgaacgagaaattatgaatgaggaatgaggtatttataggaaaagtttccacc 9850319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 18 - 169
Target Start/End: Complemental strand, 11252854 - 11252704
Alignment:
Q  18 ttagttacacatggtaactaaagacaagatacaaaaagataaaaacataccctagaaaagataggagaagatagaa-ctc-ctcctagtctcctagaatc 115  Q
    |||||||||||||||||||||| ||||  ||| ||| |||||| |||||||||||||||   |||||||||||||  ||| |||  || |||| | | ||    
T  11252854 ttagttacacatggtaactaaaaacaaattactaaa-gataaacacataccctagaaaattaaggagaagatagattctctctcgaag-ctccaa-agtc 11252758  T
Q  116 gccttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaaggc 169  Q
     ||||| ||||||||| || ||||||||||||||||||| ||||||||||||||    
T  11252757 accttcttcttgaactactacagttctgaacgagaaattctgaatgaggaaggc 11252704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 18 - 93
Target Start/End: Original strand, 7583369 - 7583443
Alignment:
Q  18 ttagttacacatggtaactaaagacaagatacaaaaagataaaaacataccctagaaaagataggagaagatagaa 93  Q
    |||||||||||||||||||||| ||||  ||| ||| ||||||||||||||||||||||   ||||||||||||||    
T  7583369 ttagttacacatggtaactaaaaacaaattactaaa-gataaaaacataccctagaaaatcaaggagaagatagaa 7583443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 118 - 193
Target Start/End: Complemental strand, 26114882 - 26114807
Alignment:
Q  118 cttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaaggcggtatttacagggaaagtttccac 193  Q
    |||||||||||||| |||||||||| |||||||||| ||||| |||||||   ||||||| ||| |||||||||||    
T  26114882 cttcctcttgaactactccagttctaaacgagaaataatgaacgaggaagatagtatttataggtaaagtttccac 26114807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 18 - 167
Target Start/End: Original strand, 17710697 - 17710845
Alignment:
Q  18 ttagttacacatggtaactaaagacaagatacaaaaagataaaaacataccctagaaaagataggagaagataga-actcctcctagtctcctagaatcg 116  Q
    |||||||||||||||||||||| ||||  ||| ||| |||||||||||||| |||||||   |||||||||||||  |||  || |  |||| | | | |    
T  17710697 ttagttacacatggtaactaaaaacaaattactaaa-gataaaaacataccgtagaaaatcaaggagaagatagattctctcccgaagctcc-aaagtag 17710794  T
Q  117 ccttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaag 167  Q
    | |||||||| ||||||  ||||||||||||||||||||||||||| ||||    
T  17710795 ctttcctcttaaactgccacagttctgaacgagaaattatgaatgaagaag 17710845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 21 - 169
Target Start/End: Complemental strand, 17336075 - 17335928
Alignment:
Q  21 gttacacatggtaactaaagacaagatacaaaaagataaaaacataccctagaaaagataggagaagatag-aactcctcctagtctcctagaatcgcct 119  Q
    |||||| |||||||||||| ||||  ||| ||| ||||||||||||||||||||||   | |||||||||| ||||||||  |  || ||||||| | ||    
T  17336075 gttacatatggtaactaaaaacaaattactaaa-gataaaaacataccctagaaaatcaatgagaagatagaaactcctctgaagct-ctagaattgtct 17335978  T
Q  120 tcctcttgaactgctccagttctgaacgagaaattatgaatgaggaaggc 169  Q
    |||||||||| |||   ||||||||||||||| || | ||||||||||||    
T  17335977 tcctcttgaaatgccaaagttctgaacgagaatttctaaatgaggaaggc 17335928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 17 - 93
Target Start/End: Original strand, 10105653 - 10105728
Alignment:
Q  17 attagttacacatggtaactaaagacaagatacaaaaagataaaaacataccctagaaaagataggagaagatagaa 93  Q
    ||||||||||||||||||||||| ||||  ||| ||| ||||||||||||||||||||||   |||||| |||||||    
T  10105653 attagttacacatggtaactaaaaacaaattactaaa-gataaaaacataccctagaaaatcaaggagaggatagaa 10105728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 92
Target Start/End: Original strand, 17217933 - 17218006
Alignment:
Q  18 ttagttacacatggtaactaaagacaagatacaaaaagataaaaacataccctagaaaagataggagaagataga 92  Q
    |||||||||||||||||||||| |||| || || ||||||||||||||| | |||||||   |||||||||||||    
T  17217933 ttagttacacatggtaactaaaaacaa-attcataaagataaaaacatagcttagaaaatcaaggagaagataga 17218006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 340 - 385
Target Start/End: Original strand, 10236342 - 10236387
Alignment:
Q  340 gtgttttcttcaatgtaagatgtctaggaacttgggaacataattc 385  Q
    ||||||||||||||||||||||||| |||||||| ||||| |||||    
T  10236342 gtgttttcttcaatgtaagatgtcttggaacttgagaacaaaattc 10236387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 154
Target Start/End: Original strand, 22171130 - 22171265
Alignment:
Q  18 ttagttacacatggtaactaaagacaagatacaaaaagataaaaacataccctagaaaagataggagaagatagaactcctcct-agtctcctagaatcg 116  Q
    ||||||| |||||||||||||| ||||  ||| ||| ||||||||||||||||||||||   ||||||||||| ||   ||||| |  |||| | | | |    
T  22171130 ttagttaaacatggtaactaaaaacaaattactaaa-gataaaaacataccctagaaaatcaaggagaagataaaaactctcctgaagctcc-aaagttg 22171227  T
Q  117 ccttcctcttgaactgctccagttctgaacgagaaatt 154  Q
    |||||||||||||||||   ||||||||||||||||||    
T  22171228 ccttcctcttgaactgccatagttctgaacgagaaatt 22171265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 31 - 92
Target Start/End: Original strand, 37740995 - 37741055
Alignment:
Q  31 gtaactaaagacaagatacaaaaagataaaaacataccctagaaaagataggagaagataga 92  Q
    ||||||||| |||||||| |||| |||||||||||||||||||||| |  ||||||||||||    
T  37740995 gtaactaaaaacaagatataaaa-gataaaaacataccctagaaaataagggagaagataga 37741055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 93
Target Start/End: Original strand, 11781911 - 11781986
Alignment:
Q  17 attagttacacatggtaactaaagacaagatacaaaaagataaaaacataccctagaaaagataggagaagatagaa 93  Q
    |||| ||||||||| |||||||| ||||  ||| ||| ||||||||||||||||||||||   ||||||||||||||    
T  11781911 attaattacacatgataactaaaaacaaattactaaa-gataaaaacataccctagaaaatcaaggagaagatagaa 11781986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 93
Target Start/End: Original strand, 17108041 - 17108116
Alignment:
Q  17 attagttacacatggtaactaaagacaagatacaaaaagataaaaacataccctagaaaagataggagaagatagaa 93  Q
    |||||||||| |||||||||||| |||   |||  |||||||||||||||||||||||||   ||||||||||||||    
T  17108041 attagttacatatggtaactaaaaacatattac-taaagataaaaacataccctagaaaatcaaggagaagatagaa 17108116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 158 - 197
Target Start/End: Original strand, 10236048 - 10236087
Alignment:
Q  158 aatgaggaaggcggtatttacagggaaagtttccacctaa 197  Q
    ||||||||||||| |||| |||||||||||||||||||||    
T  10236048 aatgaggaaggcgatattgacagggaaagtttccacctaa 10236087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 18 - 93
Target Start/End: Complemental strand, 12578026 - 12577952
Alignment:
Q  18 ttagttacacatggtaactaaagacaagatacaaaaagataaaaacataccctagaaaagataggagaagatagaa 93  Q
    ||||||||||||||||| |||| ||||  ||| ||| ||||||||||||||||||||||    |||||||||||||    
T  12578026 ttagttacacatggtaattaaaaacaaattactaaa-gataaaaacataccctagaaaaacatggagaagatagaa 12577952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 169
Target Start/End: Complemental strand, 9537368 - 9537315
Alignment:
Q  116 gccttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaaggc 169  Q
    |||||| ||||||||||   |||||| |||||| ||||||||||||||||||||    
T  9537368 gccttcttcttgaactgtcacagttcggaacgaaaaattatgaatgaggaaggc 9537315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 340 - 384
Target Start/End: Original strand, 5691508 - 5691552
Alignment:
Q  340 gtgttttcttcaatgtaagatgtctaggaacttgggaacataatt 384  Q
    ||||||||||||||||||||||| | ||||||| |||||| ||||    
T  5691508 gtgttttcttcaatgtaagatgtattggaactttggaacaaaatt 5691552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 340 - 384
Target Start/End: Complemental strand, 12836351 - 12836307
Alignment:
Q  340 gtgttttcttcaatgtaagatgtctaggaacttgggaacataatt 384  Q
    |||||| |||| || ||||||||||||||||||||||||| ||||    
T  12836351 gtgtttgcttctatataagatgtctaggaacttgggaacaaaatt 12836307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 131; Significance: 8e-68; HSPs: 60)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 131; E-Value: 8e-68
Query Start/End: Original strand, 18 - 232
Target Start/End: Complemental strand, 19199192 - 19198978
Alignment:
Q  18 ttagttacacatggtaactaaagacaagatacaaaaagataaaaacataccctagaaaagataggagaagatagaactcctcctagtctcctagaatcgc 117  Q
    ||||||||  |||||||||||| | ||||||||||||||||||| |||||||||||||||||||||||||||| |||| ||||| | |||||||||||||    
T  19199192 ttagttacctatggtaactaaaaagaagatacaaaaagataaaaccataccctagaaaagataggagaagataaaacttctccttggctcctagaatcgc 19199093  T
Q  118 cttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaaggcggtatttacagggaaagtttccacctaacttagggtaaaagtatgggt 217  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||| ||| ||||||||| | || || ||||| |||| |     
T  19199092 cttcctcttgaactgctcaagttctgaacgagaaattatgaatgaggaaggcggtatttataggaaaattttccacctgatttgggctaaaaatatgtgc 19198993  T
Q  218 tttccaggggtgaaa 232  Q
    |||| ||||||||||    
T  19198992 tttctaggggtgaaa 19198978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 19 - 221
Target Start/End: Original strand, 32086402 - 32086603
Alignment:
Q  19 tagttacacatggtaactaaagacaagatacaaaaagataaaaacataccctagaaaagataggagaagatagaactcctcctagtctcctagaatcgcc 118  Q
    |||||||||||| ||||||| ||||| |||||||||||||||||||||  ||||||||||||||||||||||||||||||||| | ||||||||||| ||    
T  32086402 tagttacacatgataactaa-gacaaaatacaaaaagataaaaacatattctagaaaagataggagaagatagaactcctccttggctcctagaatcacc 32086500  T
Q  119 ttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaaggcggtatttacagggaaagtttccacctaacttagggtaaaagtatgggtt 218  Q
    |||||||||||||||| ||||||||||||||||||| |||||||||||| ||||||||| ||||||||| | |||||||||| || ||||| |||||| |    
T  32086501 ttcctcttgaactgctacagttctgaacgagaaattgtgaatgaggaagacggtatttatagggaaagtattcacctaacttgggctaaaaatatgggct 32086600  T
Q  219 ttc 221  Q
    |||    
T  32086601 ttc 32086603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 19 - 200
Target Start/End: Complemental strand, 23010812 - 23010630
Alignment:
Q  19 tagttacacatggtaactaaagacaagatacaaaaagataaaaacataccctagaaaagata-ggagaagatagaactcctcct-agtctcctagaatcg 116  Q
    |||||||||||| ||||||| ||||| |||||||||||||||||||||||||| |||||||| |||||||||||||||| |||| |  |||||||||||     
T  23010812 tagttacacatgataactaa-gacaaaatacaaaaagataaaaacataccctataaaagataaggagaagatagaactcttcctgaagctcctagaatct 23010714  T
Q  117 ccttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaaggcggtatttacagggaaagtttccacctaactt 200  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||||||||||||||| ||||    
T  23010713 cctttctcttgaactgctccagttctgaacgagaaattatgaatgaggaaggcagtatttataaggaaagtttccacctgactt 23010630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 19 - 209
Target Start/End: Complemental strand, 11465088 - 11464898
Alignment:
Q  19 tagttacacatggtaactaaagacaagatacaaaaagataaaaacataccctagaaaagataggagaagatagaactcctcctagtct-cctagaatcgc 117  Q
    |||||||||||| ||||||| ||||| |||| |||| ||||||||||||| ||||||||||||||||||||| |||||||||| | || |||||||||      
T  11465088 tagttacacatgataactaa-gacaaaatactaaaacataaaaacataccttagaaaagataggagaagatataactcctccttggcttcctagaatctt 11464990  T
Q  118 cttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaaggcggtatttacagggaaagtttccacctaacttagggtaaaa 209  Q
    ||||||||| ||||||||||||| |||||||||||||||||||||||||||| ||||| | |||||| ||||||||||||||| || |||||    
T  11464989 cttcctcttaaactgctccagttatgaacgagaaattatgaatgaggaaggcagtattcatagggaacgtttccacctaacttgggctaaaa 11464898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 58 - 209
Target Start/End: Original strand, 18552656 - 18552807
Alignment:
Q  58 aaaaacataccctagaaaagataggagaagatagaactcctcctagtctcctagaatcgccttcctcttgaactgctccagttctgaacgagaaattatg 157  Q
    ||||||||||||||||||||||||||||||||||||| |||| | | || ||||||||||||||||||||| |||||| |||| ||||||||||||| ||    
T  18552656 aaaaacataccctagaaaagataggagaagatagaacacctcattggcttctagaatcgccttcctcttgatctgctctagttttgaacgagaaattttg 18552755  T
Q  158 aatgaggaaggcggtatttacagggaaagtttccacctaacttagggtaaaa 209  Q
    ||||||||||| |||||||| |||||||||||||||||||||| || |||||    
T  18552756 aatgaggaaggtggtatttatagggaaagtttccacctaacttgggctaaaa 18552807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 19 - 209
Target Start/End: Original strand, 29032248 - 29032439
Alignment:
Q  19 tagttacacatggtaactaaagacaagatacaaaaagataaaaacataccctagaaaagataggagaagatagaactcctcctagtct-cctagaatcgc 117  Q
    |||||||||||| |||||||  | || |||||||||||||||| |||||||||||||||||| ||||||||||||| |||||| | || |||||||||||    
T  29032248 tagttacacatgataactaagtaaaaaatacaaaaagataaaaccataccctagaaaagatatgagaagatagaacacctccttggcttcctagaatcgc 29032347  T
Q  118 cttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaaggcggtatttacagggaaagtttccacctaacttagggtaaaa 209  Q
    |||||||||||||  |||||||| |||| |||||||| ||||||| |||| |  |||||| ||||||||||||||||||||||||| |||||    
T  29032348 cttcctcttgaacatctccagttttgaatgagaaattgtgaatgaagaagacaatatttatagggaaagtttccacctaacttaggctaaaa 29032439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 21 - 200
Target Start/End: Complemental strand, 20173698 - 20173520
Alignment:
Q  21 gttacacatggtaactaaagacaagatacaaaaagataaaaacataccctagaaaagataggagaagatagaactcctcctagtctcctagaatcgcctt 120  Q
    |||||||||| ||||||| ||||| ||||||||||| |||||||||  ||| ||||||||||| ||||||||||||||||| | ||||||||||| | ||    
T  20173698 gttacacatgataactaa-gacaaaatacaaaaagacaaaaacatagtctataaaagataggacaagatagaactcctccttggctcctagaatcacatt 20173600  T
Q  121 cctcttgaactgctccagttctgaacgagaaattatgaatgaggaaggcggtatttacagggaaagtttccacctaactt 200  Q
    ||||||||||||||||| |||||||||||||||||||| |||||||  | ||||||  | ||||| ||||||||| ||||    
T  20173599 cctcttgaactgctccaattctgaacgagaaattatgagtgaggaaaaccgtatttgtatggaaattttccacctgactt 20173520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 46 - 209
Target Start/End: Original strand, 29850430 - 29850594
Alignment:
Q  46 atacaaaaagataaaaacataccctagaaaagataggagaagatagaactcctcctagtctcctagaatcgccttcctcttgaactgctccagttctgaa 145  Q
    |||| |||||||||||||||||||||||||||||| ||||||||| |||||||||| |  ||||| ||| ||||||| ||||||||||||||||||||||    
T  29850430 atactaaaagataaaaacataccctagaaaagatatgagaagataaaactcctccttggatcctataatagccttccacttgaactgctccagttctgaa 29850529  T
Q  146 cgagaaattatgaatgaggaaggc-ggtatttacagggaaagtttccacctaacttagggtaaaa 209  Q
     |||||||| |||||||||||  | |||||| | |||||||||||| ||||||||| || |||||    
T  29850530 agagaaattgtgaatgaggaattctggtattcatagggaaagtttcaacctaacttgggctaaaa 29850594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 22 - 200
Target Start/End: Original strand, 29834205 - 29834384
Alignment:
Q  22 ttacacatggtaactaaagaca-agatacaaaaagataaaaacataccctagaaaagataggagaagatagaactcctcctagtctcctagaatcgcctt 120  Q
    ||||||||| ||||||| |||| | |||| |||||||| | |||||||||||||||||||||||||||| ||||||||||| | |||||| ||| |||||    
T  29834205 ttacacatgataactaa-gacatacatactaaaagatagacacataccctagaaaagataggagaagattgaactcctccttggctcctataatagcctt 29834303  T
Q  121 cctcttgaactgctccagttctgaacgagaaattatgaatgaggaagg-cggtatttacagggaaagtttccacctaactt 200  Q
    || ||||||||| || |||| |||||||||||||||||||||| ||||  | |||| | ||||||||||||||||||||||    
T  29834304 ccacttgaactgatctagttatgaacgagaaattatgaatgagaaaggttgttattcatagggaaagtttccacctaactt 29834384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 38 - 166
Target Start/End: Complemental strand, 25884094 - 25883963
Alignment:
Q  38 aagacaagatacaaaa-agataaaaacataccctagaaaagata-ggagaagatagaactcctcct-agtctcctagaatcgccttcctcttgaactgct 134  Q
    ||||||| ||| |||| ||||||| ||||||||||||||||||| ||||||||||||||||||||| |   ||||||||||||||||||||||||||| |    
T  25884094 aagacaaaataaaaaagagataaacacataccctagaaaagataaggagaagatagaactcctcctgaagatcctagaatcgccttcctcttgaactgtt 25883995  T
Q  135 ccagttctgaacgagaaattatgaatgaggaa 166  Q
    ||||||||||||||||||||||||||||||||    
T  25883994 ccagttctgaacgagaaattatgaatgaggaa 25883963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 20 - 170
Target Start/End: Complemental strand, 23006284 - 23006133
Alignment:
Q  20 agttacacatggtaactaaagacaagatacaaaaagataaaaacataccctagaaaagatagga-gaagatagaactcctcct-agtctcctagaatcgc 117  Q
    ||||||||||| ||||||| ||||| |||||||||||||||| |||||||||||||||||| || ||||||| |||||||| | |  |||||| |||| |    
T  23006284 agttacacatgataactaa-gacaaaatacaaaaagataaaagcataccctagaaaagataagaagaagataaaactcctcgtgaagctcctataatcac 23006186  T
Q  118 cttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaaggcg 170  Q
    |||||||| ||||||||||| ||||||| ||||||||||||||||||||||||    
T  23006185 cttcctctcgaactgctccaattctgaatgagaaattatgaatgaggaaggcg 23006133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 19 - 200
Target Start/End: Original strand, 24381406 - 24381589
Alignment:
Q  19 tagttacacatggtaactaaagacaaga-tacaaaaagataaaaacataccctagaaaagataggagaagatagaactcctcctagtct-cctagaatcg 116  Q
    |||||||||||| ||||||| ||||| | ||| ||||||||||| |||| |||||||||||||| |||||||| |||||||||| | || ||||||||||    
T  24381406 tagttacacatgataactaa-gacaaaaatactaaaagataaaagcatagcctagaaaagatagtagaagatataactcctccttggcttcctagaatcg 24381504  T
Q  117 ccttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaagg-cggtatttacagggaaagtttccacctaactt 200  Q
     ||||||||||||||||| |||||||||| |||| ||| |||||||||||||  |  ||||| | |||||||||| |||||||||    
T  24381505 tcttcctcttgaactgcttcagttctgaaagagacattgtgaatgaggaaggatgacatttataaggaaagtttctacctaactt 24381589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 18 - 94
Target Start/End: Original strand, 13777497 - 13777573
Alignment:
Q  18 ttagttacacatggtaactaaagacaagatacaaaaagataaaaacataccctagaaaagataggagaagatagaac 94  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||| ||  |||||||||||||||||||||    
T  13777497 ttagttacacatggtaactaaagataagatacaaaaagataaaaacataccgtattaaagataggagaagatagaac 13777573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 18 - 195
Target Start/End: Original strand, 25531578 - 25531754
Alignment:
Q  18 ttagttacacatggtaactaaagacaagatacaaaaagataaaaacataccctagaaaagataggagaagatagaactcctcctagtctcctagaatcgc 117  Q
    |||||||||||||||||||||| |||| |||   |||||||||||||||||| ||||||   ||||||||||||||   |||| |  |||| | | |  |    
T  25531578 ttagttacacatggtaactaaaaacaa-ataactaaagataaaaacatacccaagaaaatcaaggagaagatagaaactctccgaagctccaa-agtttc 25531675  T
Q  118 cttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaagg-cggtatttacagggaaagtttccacct 195  Q
    ||||||||||| ||||||||||||||||||||||||| ||||||||||||| ||||||||| || || |||||| ||||    
T  25531676 cttcctcttgatctgctccagttctgaacgagaaattctgaatgaggaaggccggtatttatagtgagagtttctacct 25531754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 19 - 99
Target Start/End: Complemental strand, 18459570 - 18459490
Alignment:
Q  19 tagttacacatggtaactaaagacaaga-tacaaaaagataaaaacataccctagaaaagataggagaagatagaactcctc 99  Q
    |||||||||||| ||||||| ||||| | ||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  18459570 tagttacacatgataactaa-gacaaaaatactaaaagataaaaacataccctagaaaagataggagaagatagaactcctc 18459490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 18 - 165
Target Start/End: Complemental strand, 24089948 - 24089802
Alignment:
Q  18 ttagttacacatggtaactaaagacaagatacaaaaagataaaaacataccctagaaaagataggagaagatagaactcctcct-agtctcctagaatcg 116  Q
    |||||||||||||||||||||| | ||  ||| ||| ||||||||||||||||||||||   ||||||||||||||   ||||| |   ||| | | |||    
T  24089948 ttagttacacatggtaactaaaaataaattactaaa-gataaaaacataccctagaaaatcaaggagaagatagaaactctccttaagatccaa-agtcg 24089851  T
Q  117 ccttcctcttgaactgctccagttctgaacgagaaattatgaatgagga 165  Q
    |||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  24089850 ccttcctcttgaactgctacagttctgaacgagaaattctgaatgagga 24089802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 88 - 198
Target Start/End: Original strand, 19139088 - 19139199
Alignment:
Q  88 atagaactcctcctagtctcctagaatcgccttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaaggc-ggtatttacagggaaag 186  Q
    |||||||||||||| | |||||||||| |||||||| ||||||| |||||||||||||||| ||||| |||||||| ||| |  ||||||| | ||| ||    
T  19139088 atagaactcctccttggctcctagaatagccttccttttgaactactccagttctgaacgataaattgtgaatgagtaagtctcgtatttatatggacag 19139187  T
Q  187 tttccacctaac 198  Q
    ||||||||||||    
T  19139188 tttccacctaac 19139199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 18 - 169
Target Start/End: Original strand, 25536924 - 25537073
Alignment:
Q  18 ttagttacacatggtaactaaagacaagatacaaaaagataaaaacataccctagaaaagataggagaagatagaactcctcctagtctcctagaatcgc 117  Q
    ||||||||| |||||||||||| ||||  ||| ||| ||||||||||||||||||||||   ||||||||||| ||   |||  |  |||| | | | ||    
T  25536924 ttagttacatatggtaactaaaaacaaattactaaa-gataaaaacataccctagaaaatcaaggagaagataaaaactctctgaagctccaa-agttgc 25537021  T
Q  118 cttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaaggc 169  Q
    |||||||||||||| |||||||||||||||||||||| ||||||||||||||    
T  25537022 cttcctcttgaacttctccagttctgaacgagaaattctgaatgaggaaggc 25537073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 92 - 194
Target Start/End: Original strand, 28766260 - 28766363
Alignment:
Q  92 aactcctcctagtctcctagaatcgccttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaaggc-ggtatttacagggaaagtttc 190  Q
    |||||||||| | |||||||||| ||||| ||||||||  ||||||||||||||||||||||| ||||||| |||||| |||||||  |||||| |||||    
T  28766260 aactcctccttggctcctagaatagcctttctcttgaaacgctccagttctgaacgagaaattgtgaatgaagaaggctggtatttgtagggaatgtttc 28766359  T
Q  191 cacc 194  Q
    ||||    
T  28766360 cacc 28766363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 18 - 193
Target Start/End: Original strand, 20175209 - 20175387
Alignment:
Q  18 ttagttacacatggtaactaaagacaagatacaaaaagataaaaacataccctagaaaagataggagaagatag-aactcctcct-agtctcctagaatc 115  Q
    |||| ||||||||||||||||||||||  |||||||||| |  ||||||||||||||||   ||||  ||| || |||||||||| |  |||||| ||||    
T  20175209 ttagctacacatggtaactaaagacaaattacaaaaagaaatgaacataccctagaaaaacaaggaagagagagaaactcctcctgaagctcctataatc 20175308  T
Q  116 gccttcctcttgaactgctccagttctgaacgagaa-attatgaatgaggaaggcggtatttacagggaaagtttccac 193  Q
    || ||| |||||||||| ||||||| |||| ||||| |   ||||||||||| |||||||||| ||||||| |||||||    
T  20175309 gctttcatcttgaactgatccagttttgaatgagaagaccgtgaatgaggaatgcggtatttatagggaaaatttccac 20175387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 18 - 169
Target Start/End: Original strand, 25921900 - 25922050
Alignment:
Q  18 ttagttacacatggtaactaaagacaagatacaaaaagataaaaacataccctagaaaagataggagaagatagaactcctcct-agtctcctagaatcg 116  Q
    ||||| |||||||||||||||| ||||  ||| ||| ||||||||||||||||||||||   |||||||||||| | | ||||| |  |||| | | | |    
T  25921900 ttagtaacacatggtaactaaaaacaaattactaaa-gataaaaacataccctagaaaatcaaggagaagatagtaattctccttaacctccaa-agttg 25921997  T
Q  117 ccttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaaggc 169  Q
    |||||||||||||||| ||||||||||||||||||||| | ||| ||||||||    
T  25921998 ccttcctcttgaactgatccagttctgaacgagaaattctaaattaggaaggc 25922050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 18 - 169
Target Start/End: Complemental strand, 27908198 - 27908048
Alignment:
Q  18 ttagttacacatggtaactaaagacaagatacaaaaagataaaaacataccctagaaaagataggagaagatagaactcct-cctagtctcctagaatcg 116  Q
    |||||||||||||||||||||||||||  ||| ||| ||||||||||||||||||||||   |||||||||||||| | || || |  |||| | | | |    
T  27908198 ttagttacacatggtaactaaagacaaattactaaa-gataaaaacataccctagaaaatcaaggagaagatagaaattctaccgaagctcc-aaagttg 27908101  T
Q  117 ccttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaaggc 169  Q
    | |||||||||||||||   ||||||||||||||||||  |||||||||||||    
T  27908100 ctttcctcttgaactgccatagttctgaacgagaaattcagaatgaggaaggc 27908048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 307 - 391
Target Start/End: Complemental strand, 25883718 - 25883634
Alignment:
Q  307 gtgctgaaatgcctgtcttcttcgctcgtttttgtgttttcttcaatgtaagatgtctaggaacttgggaacataattcgtccct 391  Q
    |||||||||||| ||| |||||||| | ||   |||||| |||||||||||||||||| |||||||||||||||||||| |||||    
T  25883718 gtgctgaaatgcatgttttcttcgccctttgaggtgtttacttcaatgtaagatgtcttggaacttgggaacataattcctccct 25883634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 17 - 167
Target Start/End: Original strand, 28929713 - 28929862
Alignment:
Q  17 attagttacacatggtaactaaagacaagatacaaaaagataaaaacataccctagaaaagataggagaagatag-aactcctcctagtctcctagaatc 115  Q
    ||||||||||||||||||||||| |||| ||    |||||||||||||||||||||| ||   |||||||||||| ||||| || ||  |||| | | |     
T  28929713 attagttacacatggtaactaaaaacaa-attgctaaagataaaaacataccctagataatcaaggagaagatagaaactcttcttaagctcc-aaagtt 28929810  T
Q  116 gccttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaag 167  Q
    |||||||||||||| |||  || || ||||||||||||||||||||||||||    
T  28929811 gccttcctcttgaaatgccacaattatgaacgagaaattatgaatgaggaag 28929862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 167
Target Start/End: Complemental strand, 17629441 - 17629293
Alignment:
Q  18 ttagttacacatggtaactaaagacaagatacaaaaagataaaaacataccctagaaaagataggagaagatagaa-ctcctcctagtctcctagaatcg 116  Q
    |||||||||||||||||||||| ||||  ||| ||| |||||||||||||||||||||| | |||| || |||||  |||  || |  ||| || | | |    
T  17629441 ttagttacacatggtaactaaaaacaaattactaaa-gataaaaacataccctagaaaataaaggaaaatatagattctctcccgaagctc-taaagttg 17629344  T
Q  117 ccttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaag 167  Q
    | |||||||||||||||  ||||||||||||||||||| ||||||||||||    
T  17629343 cattcctcttgaactgccacagttctgaacgagaaattctgaatgaggaag 17629293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 18 - 169
Target Start/End: Original strand, 15340319 - 15340469
Alignment:
Q  18 ttagttacacatggtaactaaagacaagatacaaaaagataaaaacataccctagaaaagataggagaagatag-aactcctcctagtctcctagaatcg 116  Q
    |||||||||||||||||||||| ||||  ||||| | ||||||||||||||||||||||   |||||||||||| ||||| ||  | ||||| | | |      
T  15340319 ttagttacacatggtaactaaaaacaaattacaaca-gataaaaacataccctagaaaatcaaggagaagatagaaactcttctgaatctcc-aaagttt 15340416  T
Q  117 ccttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaaggc 169  Q
    |||||||||| || ||    |||||||||||||||||| ||||||||||||||    
T  15340417 ccttcctcttaaaatgtcaaagttctgaacgagaaattttgaatgaggaaggc 15340469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 116 - 168
Target Start/End: Complemental strand, 26659740 - 26659688
Alignment:
Q  116 gccttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaagg 168  Q
    |||||| |||| ||||||||||||| |||||||||||||||||||||||||||    
T  26659740 gccttcttcttaaactgctccagttttgaacgagaaattatgaatgaggaagg 26659688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 118 - 196
Target Start/End: Original strand, 17199007 - 17199086
Alignment:
Q  118 cttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaaggc-ggtatttacagggaaagtttccaccta 196  Q
    |||||||||| | |||||||||||||||||||||||| |||||||||||| | |||||||| || || |||||| |||||    
T  17199007 cttcctcttgcattgctccagttctgaacgagaaattctgaatgaggaagactggtatttatagtgagagtttctaccta 17199086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 124 - 195
Target Start/End: Original strand, 17891147 - 17891218
Alignment:
Q  124 cttgaactgctccagttctgaacgagaaattatgaatgaggaaggcggtatttacagggaaagtttccacct 195  Q
    ||||||||||||| |||||||||| ||||||||||||||||||| ||||| ||  ||| ||||||| |||||    
T  17891147 cttgaactgctcctgttctgaacgggaaattatgaatgaggaagacggtacttctaggtaaagttttcacct 17891218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 117 - 195
Target Start/End: Original strand, 17181398 - 17181475
Alignment:
Q  117 ccttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaaggcggtatttacagggaaagtttccacct 195  Q
    |||||||||||||| |||   |||||||| |||||||| ||||||||||| |||||||||| ||||| |||||||||||    
T  17181398 ccttcctcttgaaccgcttt-gttctgaatgagaaattgtgaatgaggaatgcggtatttatagggagagtttccacct 17181475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 21 - 190
Target Start/End: Complemental strand, 27540928 - 27540759
Alignment:
Q  21 gttacacatggtaactaaagacaagatacaaaaagataaaaacataccctagaaaagataggagaagatagaactcctcctagtctcctagaatcgcctt 120  Q
    ||||||||||||||||||| ||||| ||| |||  |||||||||||||||||||||   ||||||||||||||   |||| |   | | | | | |||||    
T  27540928 gttacacatggtaactaaacacaagttactaaat-ataaaaacataccctagaaaatcaaggagaagatagaaactctcccaaagttccaaagttgcctt 27540830  T
Q  121 cctcttgaactgctccagttctgaacgagaaattatgaatgaggaaggc-ggtatttacagggaaagtttc 190  Q
    || |||| ||||   |||||||||||||| |||| ||||||||||||||  ||||||| || |||||||||    
T  27540829 ccacttgtactgtcacagttctgaacgagtaattctgaatgaggaaggctagtatttatagtgaaagtttc 27540759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 19 - 131
Target Start/End: Complemental strand, 28605364 - 28605252
Alignment:
Q  19 tagttacacatggtaactaaag-acaagatacaaaaagataaaaacataccctagaaaagataggagaagatagaactcctcctagtc-tcctagaatcg 116  Q
    |||||||||||| ||||||||  |||| |||| |||| ||||||||||||||||||||| ||| ||||| |||||| ||||  | | | |||||||||||    
T  28605364 tagttacacatgataactaaaacacaa-atactaaaa-ataaaaacataccctagaaaaaatatgagaaaatagaattcctttttggcttcctagaatcg 28605267  T
Q  117 ccttcctcttgaact 131  Q
    |||||||||||||||    
T  28605266 ccttcctcttgaact 28605252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 116 - 168
Target Start/End: Original strand, 29144073 - 29144125
Alignment:
Q  116 gccttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaagg 168  Q
    ||||||||||||||||||  ||||||||||||| ||||| |||||||||||||    
T  29144073 gccttcctcttgaactgccacagttctgaacgaaaaattctgaatgaggaagg 29144125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 17 - 76
Target Start/End: Complemental strand, 25886925 - 25886867
Alignment:
Q  17 attagttacacatggtaactaaagacaagatacaaaaagataaaaacataccctagaaaa 76  Q
    ||||||||||||||||||||||| ||||  ||| ||| ||||||||||||||||||||||    
T  25886925 attagttacacatggtaactaaaaacaaattactaaa-gataaaaacataccctagaaaa 25886867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 76
Target Start/End: Complemental strand, 17674733 - 17674676
Alignment:
Q  18 ttagttacacatggtaactaaagacaagatacaaaaagataaaaacataccctagaaaa 76  Q
    |||||||||||||||||||||| ||||  ||| ||| ||||||||||||||||||||||    
T  17674733 ttagttacacatggtaactaaaaacaaattactaaa-gataaaaacataccctagaaaa 17674676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 311 - 385
Target Start/End: Complemental strand, 19198849 - 19198775
Alignment:
Q  311 tgaaatgcctgtcttcttcgctcgtttttgtgttttcttcaatgtaagatgtctaggaacttgggaacataattc 385  Q
    ||||||| || | ||||| | |||| || |||||||| |||||||||||||||| |||||||| |||||||||||    
T  19198849 tgaaatgtcttttttctttgttcgtcttggtgttttcatcaatgtaagatgtcttggaacttgagaacataattc 19198775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 169
Target Start/End: Complemental strand, 22378558 - 22378410
Alignment:
Q  20 agttacacatggtaactaaagacaagatacaaaaagataaaaacataccctagaaaagataggagaagataga-actcctcctagtctcctagaatcgcc 118  Q
    |||||||||||||||||||| ||||  ||| ||| ||||||||||||||||| |||||  | ||||||||| |  ||| ||| |  |||| | | | |||    
T  22378558 agttacacatggtaactaaaaacaaattactaaa-gataaaaacataccctaaaaaagcaatgagaagatatattctcttccgaagctcc-aaagtagcc 22378461  T
Q  119 ttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaaggc 169  Q
    |||||||||||||||  || |||| ||||||| ||| ||||||||||||||    
T  22378460 ttcctcttgaactgccacaattctcaacgagatattttgaatgaggaaggc 22378410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 147 - 197
Target Start/End: Complemental strand, 26652258 - 26652208
Alignment:
Q  147 gagaaattatgaatgaggaaggcggtatttacagggaaagtttccacctaa 197  Q
    |||||||| ||||||||||| |||||||||| ||||| |||||||||||||    
T  26652258 gagaaattgtgaatgaggaatgcggtatttatagggagagtttccacctaa 26652208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 287 - 391
Target Start/End: Original strand, 32086727 - 32086831
Alignment:
Q  287 ggcgcttcagtgtaaattcagtgctgaaatgcctgtcttcttcgctcgtttttgtgttttcttcaatgtaagatgtctaggaacttgggaacataattcg 386  Q
    ||||||| |||| ||||||  |||||||||| || | |||||| |  |||   |||||||| |||| |||| |||||| ||||||||||||||||||||     
T  32086727 ggcgctttagtgcaaattctatgctgaaatgtctattttcttctcctgttgaggtgttttcatcaaagtaaaatgtcttggaacttgggaacataattcc 32086826  T
Q  387 tccct 391  Q
    |||||    
T  32086827 tccct 32086831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 116 - 167
Target Start/End: Original strand, 17350474 - 17350525
Alignment:
Q  116 gccttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaag 167  Q
    ||||||||||||||||||  ||||| ||||| ||||||| ||||||||||||    
T  17350474 gccttcctcttgaactgccacagttttgaaccagaaattctgaatgaggaag 17350525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 116 - 195
Target Start/End: Original strand, 27419353 - 27419431
Alignment:
Q  116 gccttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaaggcggtatttacagggaaagtttccacct 195  Q
    ||||||||||||||| ||| | ||||| || ||||||||||||||||||||  ||||||||| ||| | | |||||||||    
T  27419353 gccttcctcttgaaccgcttc-gttctaaatgagaaattatgaatgaggaatacggtatttataggaagaatttccacct 27419431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 116 - 195
Target Start/End: Original strand, 27420499 - 27420577
Alignment:
Q  116 gccttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaaggcggtatttacagggaaagtttccacct 195  Q
    ||||||||||||||| ||| | ||||| || ||||||||||||||||||||  ||||||||| ||| | | |||||||||    
T  27420499 gccttcctcttgaaccgcttc-gttctaaatgagaaattatgaatgaggaatacggtatttataggaagaatttccacct 27420577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 118 - 195
Target Start/End: Complemental strand, 18121189 - 18121111
Alignment:
Q  118 cttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaaggc-ggtatttacagggaaagtttccacct 195  Q
    ||||||||||||||| ||||||| ||||||| ||||| |||||||| ||| | |||||||| || || |||||| ||||    
T  18121189 cttcctcttgaactggtccagttttgaacgacaaattctgaatgagaaagactggtatttatagtgagagtttctacct 18121111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 138 - 195
Target Start/End: Original strand, 26292234 - 26292291
Alignment:
Q  138 gttctgaacgagaaattatgaatgaggaaggcggtatttacagggaaagtttccacct 195  Q
    |||||||| |||||||| |||||||| || |||||||||| | ||| |||||||||||    
T  26292234 gttctgaatgagaaattgtgaatgagaaatgcggtatttatatggagagtttccacct 26292291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 193
Target Start/End: Complemental strand, 45620874 - 45620798
Alignment:
Q  116 gccttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaaggcggtatttacagggaaagtttccac 193  Q
    |||||||||||||||  || | |||||||| |||||||| |||||||||||| |||| ||||  | ||||||||||||    
T  45620874 gccttcctcttgaaccacttc-gttctgaatgagaaattgtgaatgaggaagacggtttttatcgagaaagtttccac 45620798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 18 - 54
Target Start/End: Original strand, 17198932 - 17198968
Alignment:
Q  18 ttagttacacatggtaactaaagacaagatacaaaaa 54  Q
    |||||||||||||||||||||| ||||||||| ||||    
T  17198932 ttagttacacatggtaactaaaaacaagatactaaaa 17198968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 17 - 93
Target Start/End: Complemental strand, 31803830 - 31803755
Alignment:
Q  17 attagttacacatggtaactaaagacaagatacaaaaagataaaaacataccctagaaaagataggagaagatagaa 93  Q
    |||||||||||||| |||||||| | ||  |||  |||||||||||||||| ||||||||   ||||||||||||||    
T  31803830 attagttacacatgataactaaaaataaagtac-taaagataaaaacatactctagaaaatcaaggagaagatagaa 31803755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 347 - 391
Target Start/End: Complemental strand, 45572704 - 45572660
Alignment:
Q  347 cttcaatgtaagatgtctaggaacttgggaacataattcgtccct 391  Q
    |||| ||||||||||||| |||||||||||||| ||||| |||||    
T  45572704 cttctatgtaagatgtcttggaacttgggaacaaaattcctccct 45572660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 347 - 391
Target Start/End: Complemental strand, 45576371 - 45576327
Alignment:
Q  347 cttcaatgtaagatgtctaggaacttgggaacataattcgtccct 391  Q
    |||| ||||||||||||| |||||||||||||| ||||| |||||    
T  45576371 cttctatgtaagatgtcttggaacttgggaacaaaattcctccct 45576327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 347 - 391
Target Start/End: Complemental strand, 45580038 - 45579994
Alignment:
Q  347 cttcaatgtaagatgtctaggaacttgggaacataattcgtccct 391  Q
    |||| ||||||||||||| |||||||||||||| ||||| |||||    
T  45580038 cttctatgtaagatgtcttggaacttgggaacaaaattcctccct 45579994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 347 - 391
Target Start/End: Complemental strand, 45583705 - 45583661
Alignment:
Q  347 cttcaatgtaagatgtctaggaacttgggaacataattcgtccct 391  Q
    |||| ||||||||||||| |||||||||||||| ||||| |||||    
T  45583705 cttctatgtaagatgtcttggaacttgggaacaaaattcctccct 45583661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 347 - 391
Target Start/End: Complemental strand, 45587372 - 45587328
Alignment:
Q  347 cttcaatgtaagatgtctaggaacttgggaacataattcgtccct 391  Q
    |||| ||||||||||||| |||||||||||||| ||||| |||||    
T  45587372 cttctatgtaagatgtcttggaacttgggaacaaaattcctccct 45587328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 347 - 391
Target Start/End: Complemental strand, 45591039 - 45590995
Alignment:
Q  347 cttcaatgtaagatgtctaggaacttgggaacataattcgtccct 391  Q
    |||| ||||||||||||| |||||||||||||| ||||| |||||    
T  45591039 cttctatgtaagatgtcttggaacttgggaacaaaattcctccct 45590995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 347 - 391
Target Start/End: Complemental strand, 45594706 - 45594662
Alignment:
Q  347 cttcaatgtaagatgtctaggaacttgggaacataattcgtccct 391  Q
    |||| ||||||||||||| |||||||||||||| ||||| |||||    
T  45594706 cttctatgtaagatgtcttggaacttgggaacaaaattcctccct 45594662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 347 - 391
Target Start/End: Complemental strand, 45598373 - 45598329
Alignment:
Q  347 cttcaatgtaagatgtctaggaacttgggaacataattcgtccct 391  Q
    |||| ||||||||||||| |||||||||||||| ||||| |||||    
T  45598373 cttctatgtaagatgtcttggaacttgggaacaaaattcctccct 45598329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 347 - 391
Target Start/End: Complemental strand, 45602040 - 45601996
Alignment:
Q  347 cttcaatgtaagatgtctaggaacttgggaacataattcgtccct 391  Q
    |||| ||||||||||||| |||||||||||||| ||||| |||||    
T  45602040 cttctatgtaagatgtcttggaacttgggaacaaaattcctccct 45601996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 347 - 391
Target Start/End: Complemental strand, 45605707 - 45605663
Alignment:
Q  347 cttcaatgtaagatgtctaggaacttgggaacataattcgtccct 391  Q
    |||| ||||||||||||| |||||||||||||| ||||| |||||    
T  45605707 cttctatgtaagatgtcttggaacttgggaacaaaattcctccct 45605663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 347 - 391
Target Start/End: Complemental strand, 45609374 - 45609330
Alignment:
Q  347 cttcaatgtaagatgtctaggaacttgggaacataattcgtccct 391  Q
    |||| ||||||||||||| |||||||||||||| ||||| |||||    
T  45609374 cttctatgtaagatgtcttggaacttgggaacaaaattcctccct 45609330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 347 - 391
Target Start/End: Complemental strand, 45613041 - 45612997
Alignment:
Q  347 cttcaatgtaagatgtctaggaacttgggaacataattcgtccct 391  Q
    |||| ||||||||||||| |||||||||||||| ||||| |||||    
T  45613041 cttctatgtaagatgtcttggaacttgggaacaaaattcctccct 45612997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 347 - 391
Target Start/End: Complemental strand, 45616708 - 45616664
Alignment:
Q  347 cttcaatgtaagatgtctaggaacttgggaacataattcgtccct 391  Q
    |||| ||||||||||||| |||||||||||||| ||||| |||||    
T  45616708 cttctatgtaagatgtcttggaacttgggaacaaaattcctccct 45616664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 101; Significance: 6e-50; HSPs: 42)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 19 - 195
Target Start/End: Complemental strand, 21687903 - 21687728
Alignment:
Q  19 tagttacacatggtaactaaagacaagatacaaaaagataaaaacataccctagaaaagataggagaagatagaactcctcctagtctcctagaatcgcc 118  Q
    |||||||||||| ||||||| ||||| |||||||||| |||||||||||||||||||||||||||||| | |||||||||||| | |||||| |||| ||    
T  21687903 tagttacacatgataactaa-gacaaaatacaaaaaggtaaaaacataccctagaaaagataggagaatagagaactcctccttgcctcctaaaatcacc 21687805  T
Q  119 ttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaaggcggtatttacagggaaagtttccacct 195  Q
    ||||||||||||| ||||| |||||||||||||||||||||||||||||  |||||||  | |||||||||| ||||    
T  21687804 ttcctcttgaacttctccacttctgaacgagaaattatgaatgaggaagatggtatttttatggaaagtttctacct 21687728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 19 - 177
Target Start/End: Original strand, 22569187 - 22569343
Alignment:
Q  19 tagttacacatggtaactaaagacaagatacaaaaagataaaaacataccctagaaaagataggagaagatagaactcctcctagtctcctagaatcgcc 118  Q
    |||||||||||  ||||||| ||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||| | |||||| |||  ||    
T  22569187 tagttacacataataactaa-gacaagatacaaaaagataaaaacataccgtagaaa-gataggagaagatagaactcctccttggctcctataatttcc 22569284  T
Q  119 ttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaaggcggtattta 177  Q
    ||||||||||||||||| |||||| ||||||||||||||||||||||||||| ||||||    
T  22569285 ttcctcttgaactgctctagttctcaacgagaaattatgaatgaggaaggcgatattta 22569343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 18 - 195
Target Start/End: Complemental strand, 22565240 - 22565062
Alignment:
Q  18 ttagttacacatggtaactaaagacaagatacaaaaagataaaaacataccctagaaaagataggagaagatagaactcctcctag-tctcctagaatcg 116  Q
    ||||||||||||||||||| ||||||| ||||||||| |||||| ||||||||||||||   | ||||| ||| |    ||| ||  ||||||||||| |    
T  22565240 ttagttacacatggtaactgaagacaaaatacaaaaatataaaatcataccctagaaaaacaaagagaatatatagaaactcataaatctcctagaattg 22565141  T
Q  117 ccttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaaggcggtatttacagggaaagtttccacct 195  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||    
T  22565140 ccttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaatgcggtatttatagggaaagtttccacct 22565062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 19 - 189
Target Start/End: Complemental strand, 9898644 - 9898473
Alignment:
Q  19 tagttacacatggtaactaaagacaagatacaaaaagataaaaacataccctagaaaagataggagaagatagaactcctcct-agtctcctagaatcgc 117  Q
    ||||||||| ||||||||||||| ||  ||||||||||||||| ||||||||||||| |  ||||||||||||||||| |||  || ||||||||||| |    
T  9898644 tagttacacgtggtaactaaagataaagtacaaaaagataaaatcataccctagaaatgcaaggagaagatagaactcttcccgaggctcctagaatcac 9898545  T
Q  118 cttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaaggcggtatttacagggaaagttt 189  Q
    ||| |||||| |||||||||||||||||||| ||||||||||||||||||| | |||||| |||||||||||    
T  9898544 cttgctcttgtactgctccagttctgaacgaaaaattatgaatgaggaaggtgttatttatagggaaagttt 9898473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 19 - 200
Target Start/End: Original strand, 11178009 - 11178190
Alignment:
Q  19 tagttacacatggtaactaaagacaaga-tacaaaaagataaaaacataccctagaaaagataggagaagatagaactcctcctagtctcctagaatcgc 117  Q
    |||||||||||| ||||||| ||||| | |||||||||||||||| ||| ||||||||| ||||||||||||| |||||||||| | |||||| ||| ||    
T  11178009 tagttacacatgataactaa-gacaaaaatacaaaaagataaaaatatatcctagaaaatataggagaagatataactcctccttgactcctataatagc 11178107  T
Q  118 cttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaaggcggtatttacagggaaagtttccacctaactt 200  Q
    |||||| ||||||||||| |||||||||||||||||| |||||||||||| |  |||||  |  |||||||| ||||||||||    
T  11178108 cttcctattgaactgctcaagttctgaacgagaaattgtgaatgaggaagactatatttgtatagaaagttttcacctaactt 11178190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 19 - 185
Target Start/End: Original strand, 19245646 - 19245811
Alignment:
Q  19 tagttacacatggtaactaaagacaagatacaaaaagataaaaacataccctagaaaagataggagaagatagaactcctcctagtctcctagaatcgcc 118  Q
    |||||||||||| ||| ||| ||||| ||| | ||||||||||||||| | ||||||||||||||||||||| || | ||||| | ||||||||||||||    
T  19245646 tagttacacatgataattaa-gacaaaatatagaaagataaaaacatatcatagaaaagataggagaagataaaatttctccttgcctcctagaatcgcc 19245744  T
Q  119 ttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaaggcggtatttacagggaaa 185  Q
    ||||||||||||| ||| |||||||||||||||||| |||||||| ||| || |||||| |||||||    
T  19245745 ttcctcttgaactactctagttctgaacgagaaattgtgaatgagaaagacgatatttatagggaaa 19245811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 22 - 209
Target Start/End: Complemental strand, 6629705 - 6629517
Alignment:
Q  22 ttacacatggtaactaaagacaaga-tacaaaaagataaaaacataccctagaaaagataggagaagatagaactcctcctagtctcctagaatcgcctt 120  Q
    ||||||||| |||| |||||||| | ||| ||||||||||||||||||||||||||||||  ||||||||||||||||||    |||||||||| ||||     
T  6629705 ttacacatgataac-aaagacaaaaatactaaaagataaaaacataccctagaaaagataaaagaagatagaactcctccctaactcctagaatagcctg 6629607  T
Q  121 cctcttgaactgctccagttctgaacgagaaattatgaatgaggaaggc-ggtatttacagggaaagtttccacctaacttagggtaaaa 209  Q
    | ||||||||||||| ||||||||||| |||||| |||||||||||||| ||| |||| ||||||||||| |||| ||||| || |||||    
T  6629606 cttcttgaactgctctagttctgaacgtgaaattgtgaatgaggaaggctggtgtttatagggaaagttttcaccaaactttggctaaaa 6629517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 104 - 195
Target Start/End: Original strand, 22783869 - 22783960
Alignment:
Q  104 tctcctagaatcgccttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaaggcggtatttacagggaaagtttccacct 195  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  22783869 tctcctagaatcgcctacctcttgaactgctccagttctgaacgagaaattatgaatgaggaaggaggtatttacagggaaagtttcaacct 22783960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 18 - 195
Target Start/End: Complemental strand, 8038729 - 8038548
Alignment:
Q  18 ttagttacacatggtaactaaagacaagatacaaaaagataaaaacataccctagaaaagataggagaagatagaactcctcctagt----ctcctagaa 113  Q
    |||||||||| |||||||| |||||||  ||  ||||||||||| ||||||||||||||   | |||||||||||| | |||||  |    ||| |||||    
T  8038729 ttagttacacgtggtaactgaagacaaattagtaaaagataaaatcataccctagaaaaacaatgagaagatagaaatactcctcatgaagctcttagaa 8038630  T
Q  114 tcgccttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaaggcggtatttacagggaaagtttccacct 195  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||| |  |||||| || || |||||||||||    
T  8038629 tcgccttcctcttgaactgctccagttctgaacgataaattatgaatgaggaagacaatatttatagagagagtttccacct 8038548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 54 - 209
Target Start/End: Complemental strand, 17388917 - 17388761
Alignment:
Q  54 agataaaaacataccctagaaaagataggagaagatagaactcctcctagtct-cctagaatcgccttcctcttgaactgctccagttctgaacgagaaa 152  Q
    ||||||||| ||| |||| |||  |||||||| ||||||| ||||| | | || || |||||||||||||||||||||||||| |||| | |||||||||    
T  17388917 agataaaaaaatatcctaaaaagaataggagatgatagaaatcctctttggcttccaagaatcgccttcctcttgaactgctctagttataaacgagaaa 17388818  T
Q  153 ttatgaatgaggaaggcggtatttacagggaaagtttccacctaacttagggtaaaa 209  Q
    || |||||||||||||| ||||||||||||||||||| |||||||||| || |||||    
T  17388817 ttgtgaatgaggaaggcagtatttacagggaaagttttcacctaacttgggctaaaa 17388761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 20 - 209
Target Start/End: Complemental strand, 31879393 - 31879207
Alignment:
Q  20 agttacacatggtaactaaagaca-agatacaaaaagataaaaacataccctagaaaagataggagaagatagaactcctcctagtctcctagaatcgcc 118  Q
    ||||||||||| ||||||| |||| | |||||||| |||||||||||||||||||||| ||| ||||||||| |||||||| | |   | || ||| |||    
T  31879393 agttacacatgataactaa-gacagaaatacaaaaggataaaaacataccctagaaaaaatatgagaagataaaactcctcattggaccataaaatagcc 31879295  T
Q  119 ttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaaggc-ggtatttacagggaaagtttccacctaacttagggtaaaa 209  Q
    ||||||||||||||||||||||||    |||||||| ||||||||||||||   |||||| ||||||||||| ||||| |||| || |||||    
T  31879294 ttcctcttgaactgctccagttct----gagaaattgtgaatgaggaaggcttttatttatagggaaagtttacaccttacttgggctaaaa 31879207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 52 - 195
Target Start/End: Complemental strand, 18074352 - 18074207
Alignment:
Q  52 aaagataaaaacataccctagaaaagataggagaagatagaa-ctcctcctagtctcctagaatcgccttcctcttgaactgctccagttctgaacgaga 150  Q
    |||||||||||||||||||||||||   | |||||||||||| || |||| |  ||| |||||  ||||||||||||| |||||| ||||||||||||||    
T  18074352 aaagataaaaacataccctagaaaaacaaagagaagatagaaacttctccaatgctcatagaaatgccttcctcttgagctgctctagttctgaacgaga 18074253  T
Q  151 aattatgaatgaggaaggc-ggtatttacagggaaagtttccacct 195  Q
    |||| |||| ||||||||| |||||||| || || |||||| ||||    
T  18074252 aattctgaacgaggaaggctggtatttatagtgagagtttctacct 18074207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 15 - 166
Target Start/End: Original strand, 9519088 - 9519239
Alignment:
Q  15 tcattagttacacatggtaactaaagacaagatacaaaaagataaaaacataccctagaaaagataggagaagatag-aactcctcctagtctcctagaa 113  Q
    |||| |||||||||||||||||||| ||||  ||| ||||||||||||||||| ||||||||   |||||||||||| |||||  || |  |||| | |     
T  9519088 tcatcagttacacatggtaactaaaaacaaattactaaaagataaaaacatacactagaaaatcaaggagaagatagaaactctcccgaagctcc-aaag 9519186  T
Q  114 tcgccttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaa 166  Q
    | |||||||| |||||||||  |||||||||||||||| ||||||||||||||    
T  9519187 tagccttccttttgaactgccacagttctgaacgagaatttatgaatgaggaa 9519239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 17 - 169
Target Start/End: Original strand, 8066041 - 8066191
Alignment:
Q  17 attagttacacatggtaactaaagacaagatacaaaaagataaaaacataccctagaaaagataggagaagatagaa-ctcctcctagtctcctagaatc 115  Q
    ||||||||||||||  ||||||| ||||  ||| ||| ||||||||||||||||||||||   |||||||||||||| ||||||  |  ||| ||||||     
T  8066041 attagttacacatgacaactaaaaacaaattactaaa-gataaaaacataccctagaaaatcaaggagaagatagaaactcctctaaagctc-tagaatt 8066138  T
Q  116 gccttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaaggc 169  Q
    ||||||||||||||| ||||||||| |||| |||||||| |||||| |||||||    
T  8066139 gccttcctcttgaac-gctccagttatgaatgagaaattttgaatgtggaaggc 8066191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 23 - 209
Target Start/End: Original strand, 8245974 - 8246154
Alignment:
Q  23 tacacatggtaactaaagacaagatacaaaaagataaaaacataccctagaaaagat-aggagaagatagaactcctcct-agtctcctagaatcgcctt 120  Q
    |||||||| ||||||| ||||| ||||||||||||||||||||||| |||||||||| ||||||||||| ||| |||||| |   |  ||||||||||||    
T  8245974 tacacatgataactaa-gacaaaatacaaaaagataaaaacataccttagaaaagataaggagaagatataacccctcctgaagattttagaatcgcctt 8246072  T
Q  121 cctcttgaactgctccagttctgaacgagaaattatgaatgaggaaggcggtatttacagggaaagtttccacctaacttagggtaaaa 209  Q
    || |||||| || |  |||||||||||       ||||||| |||| | |||||| | ||||||||||||||||| |||| || |||||    
T  8246073 ccacttgaattgttatagttctgaacg-------atgaatggggaatgtggtattcatagggaaagtttccacctgacttgggctaaaa 8246154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 137 - 195
Target Start/End: Complemental strand, 23644873 - 23644815
Alignment:
Q  137 agttctgaacgagaaattatgaatgaggaaggcggtatttacagggaaagtttccacct 195  Q
    ||||||||||||||||||||||||||||||| ||||||||| ||||||||||| |||||    
T  23644873 agttctgaacgagaaattatgaatgaggaagacggtatttatagggaaagttttcacct 23644815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 119 - 196
Target Start/End: Original strand, 12988651 - 12988729
Alignment:
Q  119 ttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaaggc-ggtatttacagggaaagtttccaccta 196  Q
    |||||||||||||||| ||||||||||||||||||| ||||||| |||||| | |||||| || ||||||||| |||||    
T  12988651 ttcctcttgaactgcttcagttctgaacgagaaattctgaatgaagaaggctgatatttatagtgaaagtttctaccta 12988729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 114 - 195
Target Start/End: Original strand, 2587783 - 2587864
Alignment:
Q  114 tcgccttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaaggcggtatttacagggaaagtttccacct 195  Q
    |||| |||||||||||||||  ||| ||||||  ||||||||||||||||||| ||||||||||  |||| |||||||||||    
T  2587783 tcgctttcctcttgaactgcctcagctctgaattagaaattatgaatgaggaatgcggtatttattgggagagtttccacct 2587864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 115 - 195
Target Start/End: Complemental strand, 13137082 - 13137003
Alignment:
Q  115 cgccttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaaggcggtatttacagggaaagtttccacct 195  Q
    ||||||| ||||||||||||||||||| ||| ||||||| | ||||||||||||| |||||||  || |||||||||||||    
T  13137082 cgccttcatcttgaactgctccagttccgaatgagaaataaagaatgaggaaggc-gtatttattggaaaagtttccacct 13137003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 340 - 384
Target Start/End: Original strand, 22569609 - 22569653
Alignment:
Q  340 gtgttttcttcaatgtaagatgtctaggaacttgggaacataatt 384  Q
    ||||||||||||||||||||||||| |||||||||||||||||||    
T  22569609 gtgttttcttcaatgtaagatgtcttggaacttgggaacataatt 22569653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 18 - 169
Target Start/End: Original strand, 24469117 - 24469265
Alignment:
Q  18 ttagttacacatggtaactaaagacaagatacaaaaagataaaaacataccctagaaaagataggagaagatagaactcctcctagtctcctagaatcgc 117  Q
    ||||| |||||||||||||||| ||||  ||  ||| ||||||||||||||||||||||   |||||||||||||  | |||| |     ||| | | ||    
T  24469117 ttagtcacacatggtaactaaaaacaaattattaaa-gataaaaacataccctagaaaatcaaggagaagataga--ttctcccaaagctctaaagtagc 24469213  T
Q  118 cttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaaggc 169  Q
    ||||| ||||||||||  ||||||||||||||||||| ||||||||||||||    
T  24469214 cttccacttgaactgccacagttctgaacgagaaattctgaatgaggaaggc 24469265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 18 - 195
Target Start/End: Original strand, 17383060 - 17383236
Alignment:
Q  18 ttagttacacatggtaactaaagacaagatacaaaaagataaaaacataccctagaaaagataggagaagatagaa-ctcctcctagtctcctagaatcg 116  Q
    |||||||||||||||||||||| | ||  ||| ||| |||||||||||||| |||||||   |||||||||||||| |||  || |  |||| | | | |    
T  17383060 ttagttacacatggtaactaaaaaaaat-tactaaa-gataaaaacataccttagaaaatcaaggagaagatagaaactctcccaaagctccaa-agttg 17383156  T
Q  117 ccttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaaggc-ggtatttacagggaaagtttccacct 195  Q
    ||||||| |||||||||  ||||||||||||||||||| | |||||||||||| |||||||| || || |||||| ||||    
T  17383157 ccttccttttgaactgccacagttctgaacgagaaattctaaatgaggaaggctggtatttatagtgagagtttctacct 17383236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 114 - 169
Target Start/End: Complemental strand, 22411982 - 22411927
Alignment:
Q  114 tcgccttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaaggc 169  Q
    |||||||||||||||| |||| |||||||||||||||| || ||||||||||||||    
T  22411982 tcgccttcctcttgaattgctacagttctgaacgagaatttctgaatgaggaaggc 22411927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 18 - 177
Target Start/End: Original strand, 9840389 - 9840552
Alignment:
Q  18 ttagttacacatggtaactaaagacaagatacaaaaagataaaaacataccctagaaaagataggagaagatag---aactcctcct-agtctcctagaa 113  Q
    ||||||||||| || ||||||||||||  ||| ||| ||||||||||||||||||| ||   |||||| |||||   |||||||| | |  |||||||||    
T  9840389 ttagttacacacggcaactaaagacaaattactaaa-gataaaaacataccctagacaaacaaggagaggataggaaaactcctcttgaagctcctagaa 9840487  T
Q  114 tcgccttcctcttgaactgctccagttctgaacg-agaaattatgaatgaggaaggcggtattta 177  Q
    |||||||||| || || |||||||||| |||| | | ||||||||| ||||||| || |||||||    
T  9840488 tcgccttcctatttaattgctccagttatgaatgaaaaaattatgattgaggaatgcagtattta 9840552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 116 - 166
Target Start/End: Original strand, 11193099 - 11193149
Alignment:
Q  116 gccttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaa 166  Q
    |||||| |||||||||||| ||||||||||| ||||||| |||||||||||    
T  11193099 gccttcatcttgaactgcttcagttctgaaccagaaattctgaatgaggaa 11193149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 162
Target Start/End: Complemental strand, 14078508 - 14078364
Alignment:
Q  17 attagttacacatggtaactaaagacaagatacaaaaagataaaaacataccctagaaaagataggagaagatagaactcctcct-agtctcctagaatc 115  Q
    |||||||| ||||||||| |||| ||||  ||| ||| |||||||||||| |||||||||   ||||||||||||||   ||||| |  |||| | | |     
T  14078508 attagttaaacatggtaagtaaaaacaaattactaaa-gataaaaacataacctagaaaatcaaggagaagatagaaactctcctgaaactccaa-agtt 14078411  T
Q  116 gccttcctcttgaactgctccagttctgaacgagaaattatgaatga 162  Q
    ||||||||||||||||||  || |||| |||||||||||||||||||    
T  14078410 gccttcctcttgaactgccacaattctaaacgagaaattatgaatga 14078364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 168
Target Start/End: Original strand, 1636034 - 1636180
Alignment:
Q  18 ttagttacacatggtaactaaagacaagatacaaaaagataaaaacataccctagaaaagataggagaagatagaa-ctcctcctagtctcctagaatcg 116  Q
    ||||||||||| |||||||||| ||||  ||| ||| ||||||||||||||||||||||   ||   ||||||||| |||||   |  ||| |||||  |    
T  1636034 ttagttacacacggtaactaaaaacaaattactaaa-gataaaaacataccctagaaaatcaag---aagatagaaactcctatgaagctc-tagaaatg 1636128  T
Q  117 ccttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaagg 168  Q
    |||| ||||| ||||||||||||||||||| |||| || |||||||||||||    
T  1636129 cctttctcttaaactgctccagttctgaacaagaagttctgaatgaggaagg 1636180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 52 - 93
Target Start/End: Complemental strand, 22849498 - 22849457
Alignment:
Q  52 aaagataaaaacataccctagaaaagataggagaagatagaa 93  Q
    ||||||||||||||||||||||||| | ||||||||||||||    
T  22849498 aaagataaaaacataccctagaaaataaaggagaagatagaa 22849457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 52 - 168
Target Start/End: Original strand, 24479397 - 24479511
Alignment:
Q  52 aaagataaaaacataccctagaaaagataggagaagatagaactcctcctagtctcctagaatcgccttcctcttgaactgctccagttctgaacgagaa 151  Q
    |||||||||||||||||||||||||   |||||||||||||  | |||| |     ||| | | ||||||  ||||||||||  ||||||||||||||||    
T  24479397 aaagataaaaacataccctagaaaatcaaggagaagataga--ttctcccaaagctctaaagtagccttctacttgaactgccacagttctgaacgagaa 24479494  T
Q  152 attatgaatgaggaagg 168  Q
    ||| |||||||||||||    
T  24479495 attctgaatgaggaagg 24479511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 90
Target Start/End: Original strand, 14723007 - 14723078
Alignment:
Q  18 ttagttacacatggtaactaaagacaagatacaaaaagataaaaacataccctagaaaagataggagaagata 90  Q
    |||||||||||||||||| ||| ||||  ||||||  ||||||||||||||||||||||   |||||||||||    
T  14723007 ttagttacacatggtaacaaaaaacaaattacaaat-gataaaaacataccctagaaaatcaaggagaagata 14723078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 90
Target Start/End: Complemental strand, 21846450 - 21846379
Alignment:
Q  18 ttagttacacatggtaactaaagacaagatacaaaaagataaaaacataccctagaaaagataggagaagata 90  Q
    |||||||||||||||||||||| |||| ||    |||||||||||||||||||||||||   |||||||||||    
T  21846450 ttagttacacatggtaactaaaaacaa-attattaaagataaaaacataccctagaaaatcaaggagaagata 21846379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 93
Target Start/End: Complemental strand, 22409314 - 22409239
Alignment:
Q  17 attagttacacatggtaactaaagacaagatacaaaaagataaaaacataccctagaaaagataggagaagatagaa 93  Q
    ||||||||||||||||||||||| ||||  |||  |||||||||||||||||||| ||||   ||||||| ||||||    
T  22409314 attagttacacatggtaactaaaaacaaattac-taaagataaaaacataccctaaaaaattaaggagaatatagaa 22409239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 340 - 391
Target Start/End: Original strand, 8246379 - 8246430
Alignment:
Q  340 gtgttttcttcaatgtaagatgtctaggaacttgggaacataattcgtccct 391  Q
    ||||||| |||||||| | |||||| ||||||||||||||||||| ||||||    
T  8246379 gtgtttttttcaatgtgaaatgtcttggaacttgggaacataatttgtccct 8246430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 18 - 76
Target Start/End: Original strand, 12988550 - 12988608
Alignment:
Q  18 ttagttacacatggtaactaaaga-caagatacaaaaagataaaaacataccctagaaaa 76  Q
    |||| ||||||||||||||||| | ||||||| |||| ||||||||||||||||||||||    
T  12988550 ttagctacacatggtaactaaaaaacaagatataaaa-gataaaaacataccctagaaaa 12988608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 18 - 93
Target Start/End: Complemental strand, 19578276 - 19578202
Alignment:
Q  18 ttagttacacatggtaactaaagacaagatacaaaaagataaaaacataccctagaaaagataggagaagatagaa 93  Q
    |||||||||||||||||||||| ||||  |||  |||||||||||||||| ||||| ||   ||||||||||||||    
T  19578276 ttagttacacatggtaactaaaaacaaattac-taaagataaaaacatactctagataatcaaggagaagatagaa 19578202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 18 - 93
Target Start/End: Complemental strand, 19594717 - 19594643
Alignment:
Q  18 ttagttacacatggtaactaaagacaagatacaaaaagataaaaacataccctagaaaagataggagaagatagaa 93  Q
    |||||||||||||||||||||| ||||  |||  |||||||||||||||| ||||| ||   ||||||||||||||    
T  19594717 ttagttacacatggtaactaaaaacaaattac-taaagataaaaacatactctagataatcaaggagaagatagaa 19594643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 22 - 93
Target Start/End: Complemental strand, 20004949 - 20004879
Alignment:
Q  22 ttacacatggtaactaaagacaagatacaaaaagataaaaacataccctagaaaagataggagaagatagaa 93  Q
    ||||| |||||||||||| ||||  ||| ||| ||||||||||||||||||||||   ||||||||||||||    
T  20004949 ttacaaatggtaactaaaaacaaattactaaa-gataaaaacataccctagaaaatcaaggagaagatagaa 20004879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 116 - 166
Target Start/End: Original strand, 14638729 - 14638779
Alignment:
Q  116 gccttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaa 166  Q
    ||||||||||||||||||   |||||||||| ||||||| |||||||||||    
T  14638729 gccttcctcttgaactgccatagttctgaaccagaaattttgaatgaggaa 14638779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 18 - 76
Target Start/End: Complemental strand, 21153204 - 21153147
Alignment:
Q  18 ttagttacacatggtaactaaagacaagatacaaaaagataaaaacataccctagaaaa 76  Q
    ||||||||||||||||| |||| ||||  ||| ||| ||||||||||||||||||||||    
T  21153204 ttagttacacatggtaaataaaaacaaattactaaa-gataaaaacataccctagaaaa 21153147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 341 - 391
Target Start/End: Complemental strand, 21687472 - 21687422
Alignment:
Q  341 tgttttcttcaatgtaagatgtctaggaacttgggaacataattcgtccct 391  Q
    ||||||||| |||||| ||||||| |||| ||||||||||||||| |||||    
T  21687472 tgttttctttaatgtaggatgtcttggaaattgggaacataattcctccct 21687422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 169
Target Start/End: Complemental strand, 21840778 - 21840725
Alignment:
Q  116 gccttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaaggc 169  Q
    |||||||||||||||||   |||||| ||||| ||||||||||| |||||||||    
T  21840778 gccttcctcttgaactgtcacagttccgaacgggaaattatgaacgaggaaggc 21840725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 117 - 169
Target Start/End: Complemental strand, 21846352 - 21846300
Alignment:
Q  117 ccttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaaggc 169  Q
    |||||| ||||||||||  || |||| ||||||||||| ||||||||||||||    
T  21846352 ccttccacttgaactgccacaattctaaacgagaaattttgaatgaggaaggc 21846300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0386 (Bit Score: 91; Significance: 6e-44; HSPs: 4)
Name: scaffold0386
Description:

Target: scaffold0386; HSP #1
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 19 - 197
Target Start/End: Complemental strand, 5610 - 5433
Alignment:
Q  19 tagttacacatggtaactaaagacaagatacaaaaagataaaaacataccctagaaaagataggagaagatagaactcctcctagtctcctagaatcgcc 118  Q
    |||||||||||| ||||||| |||||  ||||||||||||||||||||  |||| ||||||||||||||||| |||||||||| || || ||||||||||    
T  5610 tagttacacatgataactaa-gacaaagtacaaaaagataaaaacatatgctagtaaagataggagaagatataactcctccttgtttcatagaatcgcc 5512  T
Q  119 ttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaaggcggtatttacagggaaagtttccacctaa 197  Q
    ||| ||||||||||| || || || ||||||||||||||||||| ||| |||||| ||| ||| |||||||||||||||    
T  5511 ttcttcttgaactgcgccggtactaaacgagaaattatgaatgaagaatgcggtaattataggaaaagtttccacctaa 5433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0386; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 18 - 200
Target Start/End: Complemental strand, 14251 - 14071
Alignment:
Q  18 ttagttacacatggtaactaaagacaagatacaaaaagataaaaacataccctagaaaagataggagaagatagaactcctcctagtctcctagaatcgc 117  Q
    ||||||||||||| |||| || ||||| ||||||||||||||||| |||| ||||||||||||||||||||||||||||||| | | |||  |||||| |    
T  14251 ttagttacacatgataaccaa-gacaaaatacaaaaagataaaaaaatacgctagaaaagataggagaagatagaactcctctttggctcaaagaatcac 14153  T
Q  118 cttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaaggcggtatttacagggaaagtttccacctaactt 200  Q
     ||  ||||||| |||||||||||||| | ||| |||||||||||||||||||||||||| || |||||||| ||||||||||    
T  14152 atttttcttgaattgctccagttctgagcaagagattatgaatgaggaaggcggtatttatagagaaagttt-cacctaactt 14071  T

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Target: scaffold0386; HSP #3
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 48 - 197
Target Start/End: Complemental strand, 9837 - 9688
Alignment:
Q  48 acaaaaagataaaaacataccctagaaaagataggagaagatagaactcctcctagtctcctagaatcgccttcctcttgaactgctccagttctgaacg 147  Q
    |||||||||||||||||||  ||||||||||| |||||||||| ||||||| || | ||| || |||||||||| |||| ||||||||||||||| ||||    
T  9837 acaaaaagataaaaacataagctagaaaagattggagaagatataactcctacttggctcataaaatcgccttcttctttaactgctccagttctaaacg 9738  T
Q  148 agaaattatgaatgaggaaggcggtatttacagggaaagtttccacctaa 197  Q
    ||||||||||||||||||| || ||||||| ||| ||| |||||||||||    
T  9737 agaaattatgaatgaggaaagcagtatttataggaaaaatttccacctaa 9688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0386; HSP #4
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 340 - 384
Target Start/End: Complemental strand, 9455 - 9411
Alignment:
Q  340 gtgttttcttcaatgtaagatgtctaggaacttgggaacataatt 384  Q
    ||||||||||||||| ||||||| | |||||||||||||| ||||    
T  9455 gtgttttcttcaatgaaagatgtattggaacttgggaacaaaatt 9411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 90; Significance: 2e-43; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 19 - 209
Target Start/End: Complemental strand, 42251 - 42059
Alignment:
Q  19 tagttacacatggtaactaaagacaaga-tacaaaaagataaaaacataccctagaaaagataggagaagatagaactcctcctagtct-cctagaatcg 116  Q
    |||||||||||| ||||||| ||||| | ||| ||||||| |||| ||||||||||||||||||||||||||||| |||||| | | || ||||||||||    
T  42251 tagttacacatgataactaa-gacaaaaatactaaaagatgaaaagataccctagaaaagataggagaagatagagctcctctttggcttcctagaatcg 42153  T
Q  117 ccttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaaggc-ggtatttacagggaaagtttccacctaacttagggtaaaa 209  Q
    |||||||||||||||||||||| | ||||||||||||| ||| |||||||||| |||||||| ||  |||||||||||||||||| || |||||    
T  42152 ccttcctcttgaactgctccagatttgaacgagaaattgtgagtgaggaaggctggtatttatagaaaaagtttccacctaacttgggttaaaa 42059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1339 (Bit Score: 77; Significance: 1e-35; HSPs: 1)
Name: scaffold1339
Description:

Target: scaffold1339; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 21 - 195
Target Start/End: Original strand, 598 - 776
Alignment:
Q  21 gttacacatggtaactaaagacaagatacaaaaagataaaaacataccctagaaaagataggagaagataga---actcctcct-agtctcctagaatcg 116  Q
    ||||||||| ||||||||||||||  |||||||| |||||||||||||| ||||||   |||||||||||||   ||||||||| |  ||||||||||||    
T  598 gttacacatagtaactaaagacaaattacaaaaaaataaaaacatacccaagaaaaacaaggagaagatagagaaactcctcctgaagctcctagaatcg 697  T
Q  117 ccttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaaggcggtatttacagggaaagtttccacct 195  Q
     |||||| |||||||||||||||||| || |||| |||||||||||||||  |  |||||| |||||||||||||||||    
T  698 tcttccttttgaactgctccagttctaaatgagatattatgaatgaggaaaacaatatttatagggaaagtttccacct 776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 75; Significance: 2e-34; HSPs: 2)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 19 - 200
Target Start/End: Original strand, 40650 - 40831
Alignment:
Q  19 tagttacacatggtaactaaagacaagatacaaaaagataaaaacataccctagaaaagatagg-agaagatagaactcctcctagtctcctagaatcgc 117  Q
    |||||||||||| ||||||| ||||| ||| ||||||||||||||||||||||| ||||||||| |||||||||||||||| ||   ||||||||| |||    
T  40650 tagttacacatgataactaa-gacaaaatataaaaagataaaaacataccctaggaaagatagggagaagatagaactccttcttaactcctagaaccgc 40748  T
Q  118 cttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaaggcggtatttacagggaaagtttccacctaactt 200  Q
     || |||||||||  |||||||||||||||||||||| ||||||| | ||||  ||| || || ||||||||||  |||||||    
T  40749 attgctcttgaacaactccagttctgaacgagaaattgtgaatgatgtaggcattatatatagagaaagtttccttctaactt 40831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 308 - 385
Target Start/End: Original strand, 41059 - 41136
Alignment:
Q  308 tgctgaaatgcctgtcttcttcgctcgtttttgtgttttcttcaatgtaagatgtctaggaacttgggaacataattc 385  Q
    ||||||||||||||| |||||||   |||   ||||||||||||||||||||||||| | |||||  ||||| |||||    
T  41059 tgctgaaatgcctgttttcttcgtctgttgaggtgttttcttcaatgtaagatgtcttgaaactttagaacaaaattc 41136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 73; Significance: 3e-33; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 18 - 192
Target Start/End: Complemental strand, 244559 - 244381
Alignment:
Q  18 ttagttacacatggtaactaaagacaagatacaaaaagataaaaacataccctagaaaagataggagaagatagaa---ctcctcctagt-ctcctagaa 113  Q
    |||||||||||||||||||||| ||||  ||| ||||||||||||||||| ||||||||   ||||||||||||||   ||| ||| |   || ||||||    
T  244559 ttagttacacatggtaactaaacacaaattactaaaagataaaaacatacactagaaaaacaaggagaagatagaaaaactcttccaaaagcttctagaa 244460  T
Q  114 tcgccttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaaggcggtatttacagggaaagtttcca 192  Q
    |||||||||||||||||||||| |||| ||||||||||||||||||||||||| || |||| ||  |||| ||||||||    
T  244459 tcgccttcctcttgaactgctctagttttgaacgagaaattatgaatgaggaatgcagtatctattgggagagtttcca 244381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0671 (Bit Score: 54; Significance: 7e-22; HSPs: 1)
Name: scaffold0671
Description:

Target: scaffold0671; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 52 - 195
Target Start/End: Original strand, 2793 - 2937
Alignment:
Q  52 aaagataaaaacataccctagaaaagataggagaagat-agaactcctcctagtctcctagaatcgccttcctcttgaactgctccagttctgaacgaga 150  Q
    |||||||||||||||||||||||||   |||||||||| | |||||  || |  |||| | | | |||||||||||||| ||||||||||||||||||||    
T  2793 aaagataaaaacataccctagaaaattaaggagaagattaaaactctcccgaagctccaa-agttgccttcctcttgaattgctccagttctgaacgaga 2891  T
Q  151 aattatgaatgaggaaggc-ggtatttacagggaaagtttccacct 195  Q
    |||||||||||||||||||  ||||||| ||||| |||||| ||||    
T  2892 aattatgaatgaggaaggctagtatttatagggagagtttctacct 2937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 54; Significance: 7e-22; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 286 - 391
Target Start/End: Complemental strand, 202230 - 202125
Alignment:
Q  286 aggcgcttcagtgtaaattcagtgctgaaatgcctgtcttcttcgctcgtttttgtgttttcttcaatgtaagatgtctaggaacttgggaacataattc 385  Q
    ||||||||||||||||||||| ||||||||||| ||||||||||    |||||  |||| |||| |||||||||||||| |||||||||||||| |||||    
T  202230 aggcgcttcagtgtaaattcattgctgaaatgcatgtcttcttcatctgttttgatgttatctttaatgtaagatgtcttggaacttgggaacaaaattc 202131  T
Q  386 gtccct 391  Q
     |||||    
T  202130 ctccct 202125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 44; Significance: 6e-16; HSPs: 2)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 18 - 195
Target Start/End: Original strand, 22340 - 22517
Alignment:
Q  18 ttagttacacatggtaactaaagacaagatacaaaaagataaaaacataccctagaaaagataggagaagatag-aactcctcctagtctcctagaatcg 116  Q
    ||||||||||||||||| |||| ||||  ||| ||| |||||||||||||||||||||| | |||||||||||| |||||  || |  || | | | |      
T  22340 ttagttacacatggtaattaaaaacaaattactaaa-gataaaaacataccctagaaaataaaggagaagatagaaactctcccaaagct-caaaagttt 22437  T
Q  117 ccttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaaggc-ggtatttacagggaaagtttccacct 195  Q
    ||||||||||||||| |  ||||||||||||||||| | |||||||||||||| |||||||| || || |||||| ||||    
T  22438 ccttcctcttgaacttccacagttctgaacgagaaactctgaatgaggaaggctggtatttatagtgagagtttctacct 22517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 76
Target Start/End: Original strand, 53850 - 53907
Alignment:
Q  18 ttagttacacatggtaactaaagacaagatacaaaaagataaaaacataccctagaaaa 76  Q
    |||||||||||||||||||||| ||||  ||| ||| ||||||||||||||||||||||    
T  53850 ttagttacacatggtaactaaaaacaaattactaaa-gataaaaacataccctagaaaa 53907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 2)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 117 - 193
Target Start/End: Complemental strand, 89109 - 89033
Alignment:
Q  117 ccttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaaggcggtatttacagggaaagtttccac 193  Q
    ||||||| |||||||||||||| ||  ||| ||||||||||||||||||||||||||| || ||| || ||||||||    
T  89109 ccttcctattgaactgctccagctcgaaacaagaaattatgaatgaggaaggcggtatatataggaaacgtttccac 89033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 341 - 384
Target Start/End: Complemental strand, 88779 - 88736
Alignment:
Q  341 tgttttcttcaatgtaagatgtctaggaacttgggaacataatt 384  Q
    ||||| |||||||||||||||||| |||||||||||||||||||    
T  88779 tgtttgcttcaatgtaagatgtcttggaacttgggaacataatt 88736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1156 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold1156
Description:

Target: scaffold1156; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 18 - 76
Target Start/End: Original strand, 618 - 675
Alignment:
Q  18 ttagttacacatggtaactaaagacaagatacaaaaagataaaaacataccctagaaaa 76  Q
    |||||||||||||||||||||| ||||  ||||||| ||||||||||||||||||||||    
T  618 ttagttacacatggtaactaaaaacaaattacaaaa-gataaaaacataccctagaaaa 675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 20 - 169
Target Start/End: Original strand, 4198 - 4346
Alignment:
Q  20 agttacacatggtaactaaagacaagatacaaaaagataaaaacataccctagaaaagataggagaagatagaa-ctcctcctagtctcctagaatcgcc 118  Q
    |||||||||||||||||||| ||||  ||| ||| ||||||||||||||||||||||   ||||||| |||||  |||  || |  |||| | | | |||    
T  4198 agttacacatggtaactaaaaacaaactactaaa-gataaaaacataccctagaaaatcaaggagaaaatagattctcgcccgatgctccaa-agtagcc 4295  T
Q  119 ttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaaggc 169  Q
    | |||||||||||||| |||| |||||| ||||||| ||||||||||||||    
T  4296 tacctcttgaactgcttcagtcctgaacaagaaattgtgaatgaggaaggc 4346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0451 (Bit Score: 37; Significance: 0.000000000009; HSPs: 2)
Name: scaffold0451
Description:

Target: scaffold0451; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 311 - 391
Target Start/End: Complemental strand, 10465 - 10385
Alignment:
Q  311 tgaaatgcctgtcttcttcgctcgtttttgtgttttcttcaatgtaagatgtctaggaacttgggaacataattcgtccct 391  Q
    |||||||||||| ||||| ||   || | ||||||||||||||||||||||| | |||||||||||| ||||||| |||||    
T  10465 tgaaatgcctgttttctttgccttttatggtgttttcttcaatgtaagatgttttggaacttgggaatataattcctccct 10385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0451; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 17 - 167
Target Start/End: Original strand, 5088 - 5237
Alignment:
Q  17 attagttacacatggtaactaaagacaagatacaaaaagataaaaacataccctagaaaagataggagaagatagaactcctcct-agtctcctagaatc 115  Q
    ||||||||||||||||||||||| ||||  |||  |||||||||| ||||||||||||||   ||||| ||||||||   ||||| |  |||| | | |     
T  5088 attagttacacatggtaactaaaaacaaattac-taaagataaaatcataccctagaaaatcaaggagtagatagaaactctcctaaagctcc-aaagtt 5185  T
Q  116 gccttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaag 167  Q
    |||||| |||||||||||   | |||||||||||||||||||||| ||||||    
T  5186 gccttcttcttgaactgccaaaattctgaacgagaaattatgaattaggaag 5237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 117 - 169
Target Start/End: Original strand, 20968 - 21020
Alignment:
Q  117 ccttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaaggc 169  Q
    |||||||||||||||||  ||||||||||||| ||||||| ||||||||||||    
T  20968 ccttcctcttgaactgccacagttctgaacgaaaaattataaatgaggaaggc 21020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0263 (Bit Score: 36; Significance: 0.00000000004; HSPs: 2)
Name: scaffold0263
Description:

Target: scaffold0263; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 17 - 76
Target Start/End: Original strand, 16621 - 16679
Alignment:
Q  17 attagttacacatggtaactaaagacaagatacaaaaagataaaaacataccctagaaaa 76  Q
    ||||||||||||||||||||||| ||||  ||| ||| ||||||||||||||||||||||    
T  16621 attagttacacatggtaactaaaaacaaattactaaa-gataaaaacataccctagaaaa 16679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0263; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 116 - 169
Target Start/End: Original strand, 16719 - 16772
Alignment:
Q  116 gccttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaaggc 169  Q
    |||||||||| |||||||  ||| ||||||||| ||||||||||||||||||||    
T  16719 gccttcctctcgaactgccacagatctgaacgacaaattatgaatgaggaaggc 16772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 116 - 169
Target Start/End: Complemental strand, 102321 - 102268
Alignment:
Q  116 gccttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaaggc 169  Q
    ||||||||||||||||||  |||||||||||||||| || |||| |||||||||    
T  102321 gccttcctcttgaactgccacagttctgaacgagaatttctgaaggaggaaggc 102268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 32; Significance: 0.000000009; HSPs: 2)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 17 - 96
Target Start/End: Original strand, 73029 - 73107
Alignment:
Q  17 attagttacacatggtaactaaagacaagatacaaaaagataaaaacataccctagaaaagataggagaagatagaactc 96  Q
    ||||||||||||||||||||||| | ||  |||  |||| ||||||||||||||||||||   ||||||||||| |||||    
T  73029 attagttacacatggtaactaaaaaaaaattac-taaagttaaaaacataccctagaaaatcaaggagaagataaaactc 73107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 118 - 177
Target Start/End: Original strand, 73128 - 73188
Alignment:
Q  118 cttcctcttgaactgctccagttctgaacgagaaattatgaatgaggaaggc-ggtattta 177  Q
    ||||||||||||||||    |||||||||||||||||  ||||||||||||| ||||||||    
T  73128 cttcctcttgaactgccatggttctgaacgagaaattcggaatgaggaaggctggtattta 73188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 138 - 197
Target Start/End: Original strand, 27625 - 27684
Alignment:
Q  138 gttctgaacgagaaattatgaatgaggaaggcggtatttacagggaaagtttccacctaa 197  Q
    |||| ||| ||||||| |||||||||||  |||||||||| ||||| |||||||||||||    
T  27625 gttcagaatgagaaataatgaatgaggagagcggtatttatagggagagtttccacctaa 27684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 18 - 92
Target Start/End: Original strand, 81090 - 81163
Alignment:
Q  18 ttagttacacatggtaactaaagacaagatacaaaaagataaaaacataccctagaaaagataggagaagataga 92  Q
    |||||||||||||||||||||| |  |  ||| ||| ||||||||||||||||||||||   |||||||||||||    
T  81090 ttagttacacatggtaactaaaaaataattactaaa-gataaaaacataccctagaaaatcaaggagaagataga 81163  T

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