View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12647_low_7 (Length: 250)

Name: NF12647_low_7
Description: NF12647
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12647_low_7
NF12647_low_7
[»] chr5 (36 HSPs)
chr5 (19-118)||(13925932-13926031)
chr5 (19-118)||(4240558-4240657)
chr5 (19-118)||(14000211-14000310)
chr5 (19-118)||(1152209-1152308)
chr5 (19-118)||(40013808-40013907)
chr5 (19-118)||(4550363-4550462)
chr5 (19-118)||(5949110-5949208)
chr5 (19-118)||(7947679-7947778)
chr5 (19-118)||(37013915-37014014)
chr5 (19-118)||(1461244-1461343)
chr5 (19-118)||(22746298-22746397)
chr5 (19-118)||(139274-139373)
chr5 (19-118)||(5273025-5273124)
chr5 (19-118)||(14465333-14465432)
chr5 (19-118)||(21147068-21147167)
chr5 (45-118)||(39852372-39852445)
chr5 (19-69)||(32158053-32158103)
chr5 (118-166)||(14000086-14000136)
chr5 (19-118)||(6460793-6460892)
chr5 (19-71)||(5273114-5273166)
chr5 (38-74)||(17518474-17518510)
chr5 (118-166)||(1152084-1152134)
chr5 (118-166)||(1461129-1461179)
chr5 (118-166)||(5949273-5949323)
chr5 (118-166)||(39852520-39852570)
chr5 (19-69)||(9220862-9220912)
chr5 (19-69)||(27459104-27459154)
chr5 (31-69)||(33656196-33656234)
chr5 (19-69)||(40013899-40013949)
chr5 (41-74)||(9689338-9689371)
chr5 (41-74)||(28594444-28594477)
chr5 (134-166)||(4240443-4240475)
chr5 (19-71)||(21147026-21147078)
chr5 (19-71)||(33656238-33656290)
chr5 (134-166)||(37014087-37014119)
chr5 (38-74)||(40410636-40410672)
[»] chr1 (63 HSPs)
chr1 (19-118)||(25612151-25612250)
chr1 (19-118)||(18798485-18798584)
chr1 (19-118)||(29396495-29396594)
chr1 (19-118)||(51701574-51701673)
chr1 (19-118)||(6312568-6312667)
chr1 (19-118)||(49230880-49230979)
chr1 (19-118)||(9322607-9322706)
chr1 (19-118)||(15835160-15835259)
chr1 (19-118)||(38536196-38536295)
chr1 (19-118)||(38558414-38558513)
chr1 (19-118)||(46328036-46328135)
chr1 (19-118)||(48177569-48177668)
chr1 (19-118)||(28387500-28387599)
chr1 (19-118)||(5495203-5495302)
chr1 (19-118)||(29219282-29219379)
chr1 (19-69)||(8141284-8141334)
chr1 (19-66)||(48668931-48668978)
chr1 (19-118)||(9577539-9577638)
chr1 (19-118)||(28824479-28824578)
chr1 (19-77)||(45272581-45272638)
chr1 (19-71)||(22183364-22183416)
chr1 (19-69)||(730142-730192)
chr1 (19-118)||(19451915-19452014)
chr1 (19-69)||(21222141-21222191)
chr1 (19-69)||(35279666-35279716)
chr1 (19-118)||(37014747-37014846)
chr1 (19-69)||(50192707-50192757)
chr1 (118-166)||(6312742-6312792)
chr1 (118-166)||(25612325-25612375)
chr1 (19-69)||(953813-953863)
chr1 (19-118)||(35679235-35679334)
chr1 (19-63)||(6304415-6304459)
chr1 (19-71)||(28824568-28824620)
chr1 (19-67)||(47654510-47654558)
chr1 (19-63)||(47784423-47784466)
chr1 (19-71)||(49198464-49198515)
chr1 (118-162)||(9322486-9322532)
chr1 (118-166)||(15835035-15835085)
chr1 (118-166)||(29396370-29396420)
chr1 (118-166)||(38536081-38536131)
chr1 (118-166)||(38558299-38558349)
chr1 (19-74)||(48524271-48524326)
chr1 (118-166)||(51701748-51701798)
chr1 (19-69)||(15835251-15835301)
chr1 (19-69)||(19452048-19452098)
chr1 (19-69)||(25612109-25612159)
chr1 (19-118)||(32589060-32589159)
chr1 (37-74)||(10896845-10896882)
chr1 (19-64)||(49198429-49198474)
chr1 (19-71)||(730100-730152)
chr1 (19-71)||(953771-953823)
chr1 (38-74)||(1928406-1928442)
chr1 (19-71)||(14494161-14494213)
chr1 (19-71)||(19452004-19452056)
chr1 (134-166)||(28387375-28387407)
chr1 (19-71)||(28387589-28387641)
chr1 (124-165)||(29219450-29219493)
chr1 (19-67)||(33025506-33025554)
chr1 (90-118)||(33025578-33025606)
chr1 (19-71)||(35679324-35679376)
chr1 (38-74)||(36402293-36402329)
chr1 (118-163)||(48177447-48177494)
chr1 (38-74)||(52705439-52705475)
[»] chr8 (60 HSPs)
chr8 (19-118)||(14782241-14782340)
chr8 (19-118)||(18306067-18306166)
chr8 (19-118)||(19717987-19718086)
chr8 (19-118)||(39467574-39467673)
chr8 (19-118)||(44725916-44726015)
chr8 (19-118)||(16362197-16362296)
chr8 (19-118)||(18958833-18958932)
chr8 (19-118)||(31623696-31623795)
chr8 (19-118)||(4031364-4031463)
chr8 (19-118)||(7466336-7466435)
chr8 (19-118)||(9288563-9288662)
chr8 (19-118)||(32497526-32497625)
chr8 (19-118)||(42305891-42305990)
chr8 (19-118)||(26856067-26856167)
chr8 (19-118)||(10295487-10295586)
chr8 (19-118)||(2704925-2705024)
chr8 (19-118)||(4403108-4403207)
chr8 (19-118)||(26374536-26374635)
chr8 (19-63)||(43166809-43166853)
chr8 (19-69)||(5576776-5576826)
chr8 (19-118)||(10392343-10392442)
chr8 (19-118)||(24501919-24502018)
chr8 (19-69)||(32711437-32711487)
chr8 (19-69)||(41479098-41479148)
chr8 (19-118)||(42938223-42938322)
chr8 (19-118)||(43166796-43166895)
chr8 (19-118)||(43959659-43959757)
chr8 (118-166)||(14782116-14782166)
chr8 (118-166)||(19717862-19717912)
chr8 (118-166)||(44725791-44725841)
chr8 (19-69)||(23115323-23115373)
chr8 (118-166)||(7466500-7466550)
chr8 (118-166)||(9288438-9288488)
chr8 (118-166)||(16362361-16362411)
chr8 (118-166)||(32497690-32497740)
chr8 (118-166)||(37857284-37857334)
chr8 (19-69)||(14782332-14782382)
chr8 (19-69)||(18958924-18958974)
chr8 (19-69)||(19718078-19718128)
chr8 (19-65)||(42937354-42937400)
chr8 (19-69)||(44726007-44726057)
chr8 (41-74)||(14061595-14061628)
chr8 (124-166)||(31623856-31623900)
chr8 (19-64)||(39189973-39190018)
chr8 (38-74)||(1606015-1606051)
chr8 (38-74)||(2112837-2112873)
chr8 (21-69)||(4031455-4031503)
chr8 (19-71)||(5576816-5576868)
chr8 (19-71)||(23115363-23115415)
chr8 (134-166)||(26856260-26856292)
chr8 (38-74)||(29260278-29260314)
chr8 (19-71)||(32711477-32711529)
chr8 (38-74)||(35142088-35142124)
chr8 (41-73)||(38806882-38806914)
chr8 (38-74)||(41386872-41386908)
chr8 (38-74)||(42275018-42275054)
chr8 (19-71)||(42735472-42735524)
chr8 (19-71)||(42938312-42938364)
chr8 (38-74)||(43605366-43605402)
chr8 (19-71)||(43959617-43959669)
[»] chr7 (82 HSPs)
chr7 (19-118)||(23101293-23101392)
chr7 (19-118)||(37327922-37328021)
chr7 (19-118)||(509651-509750)
chr7 (19-118)||(3022921-3023020)
chr7 (19-118)||(9882342-9882441)
chr7 (19-118)||(28342342-28342441)
chr7 (19-118)||(29614870-29614969)
chr7 (19-118)||(39784094-39784193)
chr7 (19-118)||(12963696-12963795)
chr7 (19-118)||(19251534-19251633)
chr7 (19-118)||(33892356-33892455)
chr7 (19-118)||(44122006-44122105)
chr7 (19-118)||(46405537-46405636)
chr7 (19-118)||(3797163-3797262)
chr7 (20-118)||(10068462-10068561)
chr7 (19-118)||(12740368-12740467)
chr7 (19-118)||(18838384-18838483)
chr7 (19-118)||(40460813-40460912)
chr7 (19-112)||(8675328-8675421)
chr7 (19-118)||(7993137-7993236)
chr7 (19-118)||(28034911-28035010)
chr7 (19-118)||(32883777-32883876)
chr7 (19-77)||(33382632-33382690)
chr7 (19-118)||(39028092-39028191)
chr7 (19-77)||(17001170-17001228)
chr7 (19-118)||(29585510-29585608)
chr7 (19-77)||(29893076-29893134)
chr7 (20-118)||(44256872-44256970)
chr7 (19-108)||(41827309-41827398)
chr7 (19-118)||(47066698-47066798)
chr7 (19-69)||(48117748-48117798)
chr7 (19-69)||(973186-973236)
chr7 (19-118)||(30440798-30440897)
chr7 (19-69)||(40996804-40996854)
chr7 (19-118)||(43581196-43581295)
chr7 (19-69)||(44623431-44623481)
chr7 (118-166)||(509815-509865)
chr7 (118-166)||(23101467-23101517)
chr7 (118-166)||(28342516-28342566)
chr7 (118-166)||(39784268-39784318)
chr7 (31-73)||(10616955-10616997)
chr7 (19-69)||(12893410-12893460)
chr7 (19-118)||(18914841-18914940)
chr7 (19-118)||(20275369-20275468)
chr7 (19-69)||(44343551-44343601)
chr7 (19-69)||(47879170-47879220)
chr7 (19-69)||(47914268-47914318)
chr7 (20-77)||(10676567-10676624)
chr7 (19-67)||(34009014-34009062)
chr7 (118-166)||(7993311-7993361)
chr7 (19-119)||(9179875-9179975)
chr7 (118-166)||(29614745-29614795)
chr7 (31-69)||(7719415-7719453)
chr7 (118-161)||(8675502-8675547)
chr7 (19-69)||(12963654-12963704)
chr7 (19-69)||(19251492-19251542)
chr7 (19-77)||(25805687-25805745)
chr7 (19-69)||(29614961-29615011)
chr7 (19-69)||(34695191-34695241)
chr7 (19-69)||(34695275-34695325)
chr7 (19-69)||(39784052-39784102)
chr7 (124-166)||(3023101-3023145)
chr7 (124-166)||(18838564-18838608)
chr7 (19-64)||(43187545-43187590)
chr7 (19-67)||(727514-727562)
chr7 (134-166)||(9882218-9882250)
chr7 (19-71)||(12893368-12893420)
chr7 (19-67)||(18914934-18914982)
chr7 (38-74)||(27418644-27418680)
chr7 (19-71)||(30440756-30440808)
chr7 (41-73)||(32630687-32630719)
chr7 (19-71)||(34008972-34009024)
chr7 (19-71)||(34695233-34695285)
chr7 (134-166)||(39028274-39028306)
chr7 (38-74)||(40097140-40097176)
chr7 (134-166)||(40460698-40460730)
chr7 (134-166)||(41827491-41827523)
chr7 (19-71)||(43581285-43581337)
chr7 (19-71)||(44343591-44343643)
chr7 (134-166)||(46405422-46405454)
chr7 (19-71)||(47879128-47879180)
chr7 (19-71)||(47914226-47914278)
[»] chr4 (79 HSPs)
chr4 (19-118)||(5441404-5441503)
chr4 (19-118)||(27768056-27768155)
chr4 (19-118)||(37828509-37828608)
chr4 (19-118)||(54341144-54341243)
chr4 (20-118)||(32322092-32322190)
chr4 (19-118)||(30967406-30967505)
chr4 (19-118)||(51320921-51321020)
chr4 (19-118)||(23987214-23987313)
chr4 (27-118)||(29649774-29649865)
chr4 (19-118)||(37915827-37915926)
chr4 (19-118)||(49834920-49835019)
chr4 (19-118)||(50018251-50018350)
chr4 (24-118)||(12913229-12913323)
chr4 (19-118)||(9163076-9163175)
chr4 (19-118)||(36479338-36479437)
chr4 (19-118)||(49501618-49501717)
chr4 (19-118)||(49507683-49507782)
chr4 (19-118)||(54853575-54853674)
chr4 (19-118)||(32684095-32684193)
chr4 (19-118)||(39307360-39307459)
chr4 (19-77)||(44771001-44771060)
chr4 (19-118)||(41725125-41725224)
chr4 (19-118)||(1112893-1112992)
chr4 (19-77)||(20021344-20021402)
chr4 (19-118)||(55302843-55302942)
chr4 (19-67)||(40537303-40537351)
chr4 (19-69)||(22202015-22202065)
chr4 (19-69)||(24131128-24131178)
chr4 (19-69)||(25331131-25331181)
chr4 (19-118)||(28370924-28371023)
chr4 (43-118)||(28483923-28483998)
chr4 (19-118)||(28541698-28541797)
chr4 (19-69)||(41881239-41881289)
chr4 (19-69)||(46635798-46635848)
chr4 (19-67)||(12112945-12112993)
chr4 (118-166)||(5441578-5441628)
chr4 (118-166)||(27768230-27768280)
chr4 (118-166)||(54341318-54341368)
chr4 (19-118)||(7007374-7007473)
chr4 (20-66)||(29855682-29855728)
chr4 (19-118)||(32950943-32951042)
chr4 (19-118)||(34228690-34228789)
chr4 (19-69)||(37046608-37046658)
chr4 (19-69)||(37915785-37915835)
chr4 (19-69)||(39479513-39479563)
chr4 (19-71)||(41881279-41881331)
chr4 (134-166)||(48261319-48261351)
chr4 (19-118)||(5799977-5800077)
chr4 (20-71)||(20021303-20021354)
chr4 (118-166)||(23987378-23987428)
chr4 (20-63)||(31314890-31314933)
chr4 (118-162)||(37828388-37828434)
chr4 (19-74)||(37915743-37915798)
chr4 (31-74)||(53275851-53275894)
chr4 (118-166)||(54853450-54853500)
chr4 (19-69)||(5441362-5441412)
chr4 (19-77)||(11090349-11090407)
chr4 (19-69)||(30967497-30967547)
chr4 (37-74)||(8584007-8584044)
chr4 (22-75)||(41581938-41581991)
chr4 (124-166)||(51321101-51321145)
chr4 (19-71)||(1044768-1044819)
chr4 (19-71)||(19741104-19741156)
chr4 (19-71)||(22201973-22202025)
chr4 (19-71)||(24131168-24131220)
chr4 (19-71)||(25331089-25331141)
chr4 (19-71)||(25504835-25504887)
chr4 (19-71)||(28541656-28541708)
chr4 (134-166)||(30967291-30967323)
chr4 (19-71)||(32951032-32951084)
chr4 (19-71)||(37046648-37046700)
chr4 (19-71)||(39479553-39479605)
chr4 (38-74)||(40143822-40143858)
chr4 (29-69)||(41320788-41320828)
chr4 (38-74)||(44929923-44929959)
chr4 (90-118)||(48261198-48261226)
chr4 (134-166)||(49501501-49501533)
chr4 (134-166)||(49507566-49507598)
chr4 (38-74)||(54509760-54509796)
[»] chr3 (91 HSPs)
chr3 (19-118)||(36674237-36674336)
chr3 (19-118)||(10660535-10660634)
chr3 (20-119)||(20832993-20833092)
chr3 (19-118)||(23753493-23753592)
chr3 (19-118)||(34484137-34484236)
chr3 (19-118)||(44906620-44906719)
chr3 (19-118)||(52618072-52618171)
chr3 (19-118)||(52810378-52810477)
chr3 (19-118)||(10728748-10728847)
chr3 (19-118)||(11431526-11431625)
chr3 (19-118)||(26107261-26107360)
chr3 (19-118)||(37454861-37454960)
chr3 (19-118)||(39038040-39038139)
chr3 (19-118)||(48379157-48379256)
chr3 (22-118)||(40897147-40897243)
chr3 (19-118)||(6035160-6035259)
chr3 (19-118)||(31646391-31646490)
chr3 (19-118)||(50762157-50762256)
chr3 (21-118)||(32580179-32580275)
chr3 (19-118)||(51737833-51737933)
chr3 (19-118)||(12103629-12103728)
chr3 (19-118)||(17946288-17946387)
chr3 (27-118)||(44276397-44276488)
chr3 (19-77)||(54628843-54628901)
chr3 (19-118)||(6975749-6975845)
chr3 (19-118)||(50903347-50903449)
chr3 (43-118)||(539511-539586)
chr3 (19-77)||(18749570-18749628)
chr3 (24-77)||(15493008-15493061)
chr3 (19-118)||(996193-996292)
chr3 (19-118)||(19253827-19253926)
chr3 (19-118)||(20498209-20498308)
chr3 (19-118)||(37820584-37820683)
chr3 (19-118)||(29030006-29030104)
chr3 (19-74)||(25418366-25418421)
chr3 (19-69)||(3999801-3999851)
chr3 (19-118)||(6589564-6589663)
chr3 (39-118)||(18749632-18749711)
chr3 (19-69)||(33996697-33996747)
chr3 (19-69)||(35337735-35337785)
chr3 (19-118)||(40246844-40246943)
chr3 (19-69)||(53929284-53929334)
chr3 (19-60)||(27240408-27240449)
chr3 (118-166)||(11431700-11431750)
chr3 (118-166)||(36674112-36674162)
chr3 (23-74)||(52114532-52114583)
chr3 (19-69)||(6131327-6131377)
chr3 (19-118)||(10139253-10139352)
chr3 (19-69)||(33807955-33808005)
chr3 (19-69)||(51699635-51699685)
chr3 (124-166)||(10660691-10660735)
chr3 (19-71)||(3206392-3206444)
chr3 (19-71)||(23753582-23753634)
chr3 (19-63)||(27899386-27899430)
chr3 (118-166)||(10728633-10728683)
chr3 (134-165)||(15492850-15492881)
chr3 (118-166)||(17946462-17946512)
chr3 (118-166)||(18749786-18749836)
chr3 (118-162)||(32580350-32580396)
chr3 (118-166)||(34484012-34484062)
chr3 (118-166)||(44906495-44906545)
chr3 (118-166)||(50762042-50762092)
chr3 (17-71)||(3999841-3999895)
chr3 (19-69)||(10660493-10660543)
chr3 (19-69)||(36674328-36674378)
chr3 (19-69)||(44762193-44762243)
chr3 (24-69)||(6975712-6975757)
chr3 (37-74)||(19552150-19552187)
chr3 (124-166)||(37455031-37455075)
chr3 (19-64)||(44276347-44276392)
chr3 (19-71)||(1440149-1440200)
chr3 (19-71)||(10139342-10139394)
chr3 (19-71)||(19253785-19253837)
chr3 (90-118)||(23535918-23535946)
chr3 (134-166)||(23753389-23753421)
chr3 (134-166)||(26107453-26107485)
chr3 (38-74)||(26555860-26555896)
chr3 (38-74)||(27593198-27593234)
chr3 (38-74)||(30588885-30588921)
chr3 (19-71)||(35337693-35337745)
chr3 (38-74)||(36055009-36055045)
chr3 (38-74)||(36786017-36786053)
chr3 (19-71)||(37820673-37820725)
chr3 (38-74)||(38629802-38629838)
chr3 (38-74)||(38682472-38682508)
chr3 (19-71)||(44762233-44762285)
chr3 (38-74)||(50900449-50900485)
chr3 (42-74)||(52024201-52024233)
chr3 (134-166)||(52617953-52617985)
chr3 (118-163)||(52810552-52810599)
chr3 (38-74)||(53184075-53184111)
[»] chr2 (56 HSPs)
chr2 (19-118)||(7026606-7026705)
chr2 (19-118)||(18177269-18177368)
chr2 (19-118)||(28740392-28740491)
chr2 (19-118)||(28844557-28844656)
chr2 (20-118)||(6224656-6224755)
chr2 (19-118)||(33135625-33135724)
chr2 (19-118)||(25288161-25288260)
chr2 (19-118)||(26788786-26788887)
chr2 (19-118)||(3574849-3574948)
chr2 (19-118)||(10657408-10657507)
chr2 (19-116)||(215336-215433)
chr2 (19-115)||(3463673-3463770)
chr2 (19-118)||(13833531-13833630)
chr2 (19-118)||(16269693-16269792)
chr2 (19-118)||(22551872-22551971)
chr2 (19-118)||(24776357-24776456)
chr2 (19-118)||(31170733-31170832)
chr2 (19-118)||(305574-305673)
chr2 (19-69)||(5093205-5093255)
chr2 (19-118)||(12407382-12407481)
chr2 (19-69)||(20605154-20605204)
chr2 (19-69)||(20605238-20605288)
chr2 (19-69)||(43847648-43847698)
chr2 (19-118)||(44765777-44765876)
chr2 (19-77)||(10125440-10125500)
chr2 (118-166)||(7027063-7027113)
chr2 (19-69)||(14198735-14198785)
chr2 (19-118)||(35317064-35317163)
chr2 (20-69)||(26601358-26601407)
chr2 (19-71)||(9120128-9120180)
chr2 (134-166)||(18177461-18177493)
chr2 (38-74)||(24193595-24193631)
chr2 (19-71)||(24776315-24776367)
chr2 (134-166)||(26788977-26789009)
chr2 (118-166)||(25288335-25288385)
chr2 (19-118)||(1789444-1789543)
chr2 (19-69)||(7026564-7026614)
chr2 (19-69)||(10125492-10125542)
chr2 (19-69)||(26788744-26788794)
chr2 (19-69)||(32125252-32125302)
chr2 (134-166)||(3463856-3463888)
chr2 (19-71)||(5093245-5093297)
chr2 (38-74)||(11534881-11534917)
chr2 (19-71)||(12407340-12407392)
chr2 (19-71)||(16269651-16269703)
chr2 (19-71)||(20605112-20605164)
chr2 (19-71)||(20605196-20605248)
chr2 (90-118)||(21370659-21370687)
chr2 (134-166)||(28740277-28740309)
chr2 (134-166)||(28844749-28844781)
chr2 (38-74)||(29940991-29941027)
chr2 (19-71)||(31170822-31170874)
chr2 (134-166)||(33135816-33135848)
chr2 (38-74)||(34028935-34028971)
chr2 (134-166)||(43078757-43078789)
chr2 (38-74)||(45546977-45547013)
[»] scaffold0922 (1 HSPs)
scaffold0922 (19-118)||(4201-4300)
[»] chr6 (26 HSPs)
chr6 (19-118)||(14262539-14262638)
chr6 (19-118)||(31895696-31895795)
chr6 (19-118)||(34773409-34773508)
chr6 (19-118)||(30385163-30385262)
chr6 (19-118)||(34759156-34759256)
chr6 (42-118)||(7497099-7497175)
chr6 (19-118)||(6197584-6197683)
chr6 (19-69)||(2300893-2300943)
chr6 (21-118)||(7051847-7051944)
chr6 (19-71)||(29076598-29076650)
chr6 (19-71)||(29111571-29111623)
chr6 (118-166)||(4200418-4200468)
chr6 (118-166)||(31895870-31895920)
chr6 (19-118)||(1391624-1391723)
chr6 (134-166)||(31067675-31067707)
chr6 (118-166)||(14262414-14262464)
chr6 (19-69)||(656966-657015)
chr6 (19-69)||(28002665-28002715)
chr6 (19-69)||(31895654-31895704)
chr6 (19-69)||(34773367-34773417)
chr6 (19-71)||(1391582-1391634)
chr6 (19-71)||(2300933-2300985)
chr6 (19-71)||(6197673-6197725)
chr6 (38-74)||(10644016-10644052)
chr6 (113-162)||(30385054-30385105)
chr6 (38-74)||(30877898-30877934)
[»] scaffold0543 (3 HSPs)
scaffold0543 (19-118)||(10561-10660)
scaffold0543 (118-166)||(10735-10785)
scaffold0543 (19-69)||(10519-10569)
[»] scaffold0306 (2 HSPs)
scaffold0306 (19-118)||(13883-13982)
scaffold0306 (118-166)||(14047-14097)
[»] scaffold0152 (3 HSPs)
scaffold0152 (19-118)||(21345-21444)
scaffold0152 (118-166)||(21230-21280)
scaffold0152 (118-166)||(28517-28567)
[»] scaffold0110 (2 HSPs)
scaffold0110 (19-116)||(39726-39823)
scaffold0110 (118-166)||(39599-39649)
[»] scaffold1504 (1 HSPs)
scaffold1504 (19-118)||(864-964)
[»] scaffold0054 (1 HSPs)
scaffold0054 (19-63)||(37027-37071)
[»] scaffold0010 (3 HSPs)
scaffold0010 (19-76)||(233738-233795)
scaffold0010 (19-76)||(234586-234643)
scaffold0010 (19-76)||(222570-222627)
[»] scaffold0400 (2 HSPs)
scaffold0400 (19-118)||(15140-15239)
scaffold0400 (19-71)||(15229-15281)
[»] scaffold0365 (2 HSPs)
scaffold0365 (19-118)||(15783-15882)
scaffold0365 (19-71)||(15872-15924)
[»] scaffold0037 (1 HSPs)
scaffold0037 (19-118)||(100212-100311)
[»] scaffold0004 (1 HSPs)
scaffold0004 (19-118)||(102094-102195)
[»] scaffold0276 (2 HSPs)
scaffold0276 (19-67)||(697-745)
scaffold0276 (19-71)||(735-787)
[»] scaffold0042 (1 HSPs)
scaffold0042 (118-166)||(58058-58108)
[»] scaffold0113 (1 HSPs)
scaffold0113 (19-69)||(39051-39101)
[»] scaffold0202 (1 HSPs)
scaffold0202 (38-74)||(16546-16582)
[»] scaffold0016 (1 HSPs)
scaffold0016 (38-74)||(81784-81820)


Alignment Details
Target: chr5 (Bit Score: 75; Significance: 1e-34; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 19 - 118
Target Start/End: Original strand, 13925932 - 13926031
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||       |||||||||||||||||||||||||||||    
T  13925932 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattacttaaaaaaagtcttgtggtattcaaaatcattcaaatt 13926031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 19 - 118
Target Start/End: Complemental strand, 4240657 - 4240558
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||       |||||||||||||||||||||||||||||    
T  4240657 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatt 4240558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 19 - 118
Target Start/End: Complemental strand, 14000310 - 14000211
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||| ||||       |||||||||||||||||||||||||||||    
T  14000310 caatcaagactctttgtcatttttaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatt 14000211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 19 - 118
Target Start/End: Complemental strand, 1152308 - 1152209
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| || | ||       |||||||||||||||||||||||||||||    
T  1152308 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactttttatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatt 1152209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 19 - 118
Target Start/End: Complemental strand, 40013907 - 40013808
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||        ||||||| ||||||||||||||||||||    
T  40013907 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaaatcttgtgttattcaaaatcattcaaatt 40013808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 19 - 118
Target Start/End: Complemental strand, 4550462 - 4550363
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||| |||| |||||||||||||||||||| ||||||| | ||       |||||||||||||||||||||||||||||    
T  4550462 caatcaagactctttgtcattttaacaaaggcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatt 4550363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 19 - 118
Target Start/End: Original strand, 5949110 - 5949208
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| | ||        ||||||||||||||||||||||||||||    
T  5949110 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaaatttttcatcacttaaaaaaa-tcttgtggtattcaaaatcattcaaatt 5949208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 19 - 118
Target Start/End: Complemental strand, 7947778 - 7947679
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||       |||||| | ||||||||||||||||||||    
T  7947778 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgcgatattcaaaatcattcaaatt 7947679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 19 - 118
Target Start/End: Original strand, 37013915 - 37014014
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||| | ||       |||||| ||||||||||||||||||||||    
T  37013915 caatcaagactctttgtcatttttaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgcggtattcaaaatcattcaaatt 37014014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 19 - 118
Target Start/End: Complemental strand, 1461343 - 1461244
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||| | ||       |||||| | ||||||||||||||||||||    
T  1461343 caatcaagactctttgtaattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgcgctattcaaaatcattcaaatt 1461244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 19 - 118
Target Start/End: Original strand, 22746298 - 22746397
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||| | ||||||| | ||       |||||||| ||||||||||||||||||||    
T  22746298 caatcaaaactctttgtcattttaaaaaagtcttgaggtattcaatcaaaacttttcatcacttaaaaaaagtcttgtgatattcaaaatcattcaaatt 22746397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 19 - 118
Target Start/End: Original strand, 139274 - 139373
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| |||||||||||| ||||||||| || ||||||||||||||| |||| || | ||       |||| ||||||||||||||||||||||||    
T  139274 caatcaagattctttgtcatttaaaaaaagtcatgtggtattcaatcaagacttttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatt 139373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 19 - 118
Target Start/End: Complemental strand, 5273124 - 5273025
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| |||||||||||| |||||||||||  ||||||||||||||| | || || ||||       |||| ||||||||||||||||||||||||    
T  5273124 caatcaagattctttgtcatttaaaaaaagtcttatggtattcaatcaagactcttaatcatttaaaaaaagtctagtggtattcaaaatcattcaaatt 5273025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 19 - 118
Target Start/End: Complemental strand, 14465432 - 14465333
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    |||||||||||||||||||||| |||||||| ||  ||||||||||||||| | |||||   ||       |||||||||||||||||||||||||||||    
T  14465432 caatcaagactctttgtcatttaaaaaaagttttctggtattcaatcaagactcttcatcgcttaaaaaaagtcttgtggtattcaaaatcattcaaatt 14465333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 19 - 118
Target Start/End: Original strand, 21147068 - 21147167
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| |||||||||||| |||||||||||| ||||||||||||||| | || || | ||       |||| ||||||||||||||||||||||||    
T  21147068 caatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatt 21147167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 45 - 118
Target Start/End: Original strand, 39852372 - 39852445
Alignment:
Q  45 aaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||| || |||| ||||       |||||||||||||||||||||||||||||    
T  39852372 aaagtcttgaggtattcaatcaagacttctcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatt 39852445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 19 - 69
Target Start/End: Complemental strand, 32158103 - 32158053
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 69  Q
    ||||||||| |||||||||||| |||||||||||| |||||||||||||||    
T  32158103 caatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaaga 32158053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 118 - 166
Target Start/End: Complemental strand, 14000136 - 14000086
Alignment:
Q  118 tcttttatgaaaagatga--tttcttgagattgtttttattttaaaagtta 166  Q
    ||||| ||||||||||||  |||||||||||||||||||||||||||||||    
T  14000136 tctttcatgaaaagatgagatttcttgagattgtttttattttaaaagtta 14000086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 19 - 118
Target Start/End: Original strand, 6460793 - 6460892
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| |||||||||||| ||||||||| ||  |||||||||||||| | || || ||||        ||| ||||||||||||||||||||||||    
T  6460793 caatcaagattctttgtcatttaaaaaaagtcatgtcgtattcaatcaagactcttaatcatttaaaaaaaatctagtggtattcaaaatcattcaaatt 6460892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 5273166 - 5273114
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    ||||||||| | |||||||||| |||||||||||| | |||||||||||||||    
T  5273166 caatcaagattttttgtcatttaaaaaaagtcttgtgctattcaatcaagatt 5273114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 74
Target Start/End: Original strand, 17518474 - 17518510
Alignment:
Q  38 ttttaaaaaagtcttgaggtattcaatcaagattttt 74  Q
    |||||||||||||||| ||||||||||||||||||||    
T  17518474 ttttaaaaaagtcttgtggtattcaatcaagattttt 17518510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 118 - 166
Target Start/End: Complemental strand, 1152134 - 1152084
Alignment:
Q  118 tcttttatgaaaagatga--tttcttgagattgtttttattttaaaagtta 166  Q
    ||||||||||||||||||  |||||| ||||||||||| ||||||||||||    
T  1152134 tcttttatgaaaagatgagatttcttaagattgtttttcttttaaaagtta 1152084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 118 - 166
Target Start/End: Complemental strand, 1461179 - 1461129
Alignment:
Q  118 tcttttatgaaaagatga--tttcttgagattgtttttattttaaaagtta 166  Q
    ||||| ||||||||||||  |||||||||||||||||| ||||||||||||    
T  1461179 tctttcatgaaaagatgagatttcttgagattgtttttcttttaaaagtta 1461129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 118 - 166
Target Start/End: Original strand, 5949273 - 5949323
Alignment:
Q  118 tcttttatgaaaagatga--tttcttgagattgtttttattttaaaagtta 166  Q
    ||||| ||||||||||||  |||||||||||||||||| ||||||||||||    
T  5949273 tctttcatgaaaagatgagatttcttgagattgtttttcttttaaaagtta 5949323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 118 - 166
Target Start/End: Original strand, 39852520 - 39852570
Alignment:
Q  118 tcttttatgaaaagatga--tttcttgagattgtttttattttaaaagtta 166  Q
    ||||| ||||||||||||  |||||||||||||||||| ||||||||||||    
T  39852520 tctttcatgaaaagatgagatttcttgagattgtttttgttttaaaagtta 39852570  T

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Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 69
Target Start/End: Complemental strand, 9220912 - 9220862
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 69  Q
    ||||||| ||||||||||||||  ||||||||||| | |||||||||||||    
T  9220912 caatcaaaactctttgtcatttagaaaaagtcttgtgatattcaatcaaga 9220862  T

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Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 69
Target Start/End: Complemental strand, 27459154 - 27459104
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 69  Q
    |||| |||| |||||||||||| ||||||||||||  ||||||||||||||    
T  27459154 caattaagattctttgtcatttaaaaaaagtcttgtagtattcaatcaaga 27459104  T

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Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 69
Target Start/End: Complemental strand, 33656234 - 33656196
Alignment:
Q  31 tttgtcattttaaaaaagtcttgaggtattcaatcaaga 69  Q
    |||||||||| |||||||||||| |||||||||||||||    
T  33656234 tttgtcatttaaaaaaagtcttgtggtattcaatcaaga 33656196  T

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Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 69
Target Start/End: Complemental strand, 40013949 - 40013899
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 69  Q
    ||||||||||| ||||  |||| |||||||||||| |||||||||||||||    
T  40013949 caatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaaga 40013899  T

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Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 41 - 74
Target Start/End: Complemental strand, 9689371 - 9689338
Alignment:
Q  41 taaaaaagtcttgaggtattcaatcaagattttt 74  Q
    ||||||| ||||||||||||||||||||||||||    
T  9689371 taaaaaaatcttgaggtattcaatcaagattttt 9689338  T

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Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 41 - 74
Target Start/End: Complemental strand, 28594477 - 28594444
Alignment:
Q  41 taaaaaagtcttgaggtattcaatcaagattttt 74  Q
    ||||||||||||| ||||||||||||||||||||    
T  28594477 taaaaaagtcttgtggtattcaatcaagattttt 28594444  T

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Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 166
Target Start/End: Complemental strand, 4240475 - 4240443
Alignment:
Q  134 gatttcttgagattgtttttattttaaaagtta 166  Q
    |||||||||||||||||||| ||||||||||||    
T  4240475 gatttcttgagattgtttttcttttaaaagtta 4240443  T

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Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 21147026 - 21147078
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    |||||||||||||||   |||| |||||||||||| | |||||||||||||||    
T  21147026 caatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagatt 21147078  T

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Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 33656290 - 33656238
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    |||||||||||||||   |||| |||||||||||| | |||||||||||||||    
T  33656290 caatcaagactcttttcaatttaaaaaaagtcttgtgttattcaatcaagatt 33656238  T

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Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 166
Target Start/End: Original strand, 37014087 - 37014119
Alignment:
Q  134 gatttcttgagattgtttttattttaaaagtta 166  Q
    |||||||||||||||||||| ||||||||||||    
T  37014087 gatttcttgagattgtttttcttttaaaagtta 37014119  T

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Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 74
Target Start/End: Original strand, 40410636 - 40410672
Alignment:
Q  38 ttttaaaaaagtcttgaggtattcaatcaagattttt 74  Q
    ||||| |||||||||| ||||||||||||||||||||    
T  40410636 ttttataaaagtcttgtggtattcaatcaagattttt 40410672  T

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Target: chr1 (Bit Score: 75; Significance: 1e-34; HSPs: 63)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 19 - 118
Target Start/End: Original strand, 25612151 - 25612250
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||       |||||||||||||||||||||||||||||    
T  25612151 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatt 25612250  T

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Target: chr1; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 19 - 118
Target Start/End: Original strand, 18798485 - 18798584
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||       |||||||||||||||||||||||||||||    
T  18798485 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatt 18798584  T

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Target: chr1; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 19 - 118
Target Start/End: Complemental strand, 29396594 - 29396495
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||       |||||||||||||||||||||||||||||    
T  29396594 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatt 29396495  T

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Target: chr1; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 19 - 118
Target Start/End: Original strand, 51701574 - 51701673
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||       |||||||||||||||||||||||||||||    
T  51701574 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatt 51701673  T

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Target: chr1; HSP #5
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 19 - 118
Target Start/End: Original strand, 6312568 - 6312667
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||       |||||||||||||||||||||||||||||    
T  6312568 caattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatt 6312667  T

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Target: chr1; HSP #6
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 19 - 118
Target Start/End: Original strand, 49230880 - 49230979
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||       |||||||||||||||||||||||||||||    
T  49230880 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatt 49230979  T

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Target: chr1; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 19 - 118
Target Start/End: Complemental strand, 9322706 - 9322607
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| ||||       ||| |||||||||||||||||||||||||    
T  9322706 caatcaagactctttgtcattttaaaaaagtcttgaggtattcgatcaagacttttcatcatttaaaaaaagtcctgtggtattcaaaatcattcaaatt 9322607  T

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Target: chr1; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 19 - 118
Target Start/End: Complemental strand, 15835259 - 15835160
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| || |||| ||||        ||||||||||||||||||||||||||||    
T  15835259 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttctcatcatttaaaaaaaatcttgtggtattcaaaatcattcaaatt 15835160  T

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Target: chr1; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 19 - 118
Target Start/End: Complemental strand, 38536295 - 38536196
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| ||       ||||||||||||||||||| |||||||||    
T  38536295 caatcaagactctttgtcattttaaaaaagttttgaggtattcaatcaagacttttcattacttaacaaaagtcttgtggtattcaaaattattcaaatt 38536196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 19 - 118
Target Start/End: Complemental strand, 38558513 - 38558414
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| ||       ||||||||||||||||||| |||||||||    
T  38558513 caatcaagactctttgtcattttaaaaaagttttgaggtattcaatcaagacttttcattacttaacaaaagtcttgtggtattcaaaattattcaaatt 38558414  T

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Target: chr1; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 19 - 118
Target Start/End: Original strand, 46328036 - 46328135
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||       |||| ||||||||||||||||||||||||    
T  46328036 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttacaaaaagtctcgtggtattcaaaatcattcaaatt 46328135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 19 - 118
Target Start/End: Complemental strand, 48177668 - 48177569
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||| | ||       |||||||||||||||||||||||||||||    
T  48177668 caatcaatactctttgtcattttaaaaaagtcttgaggtattcaatcaaaatttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatt 48177569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 19 - 118
Target Start/End: Complemental strand, 28387599 - 28387500
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| ||||        |||||||||||||||| |||||||||||    
T  28387599 caatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaaatcttgtggtattcaaattcattcaaatt 28387500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 19 - 118
Target Start/End: Complemental strand, 5495302 - 5495203
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||       |||| |||||||||||||||||| |||||    
T  5495302 caattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtctcgtggtattcaaaatcatttaaatt 5495203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 19 - 118
Target Start/End: Original strand, 29219282 - 29219379
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    |||||||||||||  |||||||||||||||||||||| ||||||||||||| ||||||| | ||       |||||||||||||||||||||||||||||    
T  29219282 caatcaagactct--gtcattttaaaaaagtcttgagatattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatt 29219379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 19 - 69
Target Start/End: Complemental strand, 8141334 - 8141284
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 69  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8141334 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 8141284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 19 - 66
Target Start/End: Complemental strand, 48668978 - 48668931
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatca 66  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||    
T  48668978 caatcaagactctttgtcattttaaaaaagttttgaggtattcaatca 48668931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 19 - 118
Target Start/End: Complemental strand, 9577638 - 9577539
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    |||||||||| |||||||||||||||||||||||||| |||| |||||| | |||| || | ||       |||||||| ||||||||||||||||||||    
T  9577638 caatcaagaccctttgtcattttaaaaaagtcttgagatattaaatcaaaactttttatcacttaaaaaaagtcttgtgatattcaaaatcattcaaatt 9577539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 19 - 118
Target Start/End: Complemental strand, 28824578 - 28824479
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| | |||||||||| |||||||||||| ||||||||||||||| | || || | ||       |||||||||||||||||||||||||||||    
T  28824578 caatcaagattatttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaacagtcttgtggtattcaaaatcattcaaatt 28824479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 19 - 77
Target Start/End: Original strand, 45272581 - 45272638
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcat 77  Q
    ||||||| ||||||||||||||||||| ||||||||||||||||||||||| |||||||    
T  45272581 caatcaaaactctttgtcattttaaaa-agtcttgaggtattcaatcaagacttttcat 45272638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 22183364 - 22183416
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    ||||||||| |||||||||||| |||||||||||| |||||||||||||||||    
T  22183364 caatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagatt 22183416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 19 - 69
Target Start/End: Original strand, 730142 - 730192
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 69  Q
    ||||||||| |||||||||||| |||||||||||| |||||||||||||||    
T  730142 caatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaaga 730192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 19 - 118
Target Start/End: Complemental strand, 19452014 - 19451915
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| |||||||||||| |||||||||||| |||||| |||||||| | || || | ||       |||| ||||||||||||||||||||||||    
T  19452014 caatcaagattctttgtcatttaaaaaaagtcttgtggtatttaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatt 19451915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 19 - 69
Target Start/End: Original strand, 21222141 - 21222191
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 69  Q
    ||||||||| |||||||||||| |||||||||||| |||||||||||||||    
T  21222141 caatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaaga 21222191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 19 - 69
Target Start/End: Original strand, 35279666 - 35279716
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 69  Q
    ||||||||| |||||||||||| |||||||||||| |||||||||||||||    
T  35279666 caatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaaga 35279716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 19 - 118
Target Start/End: Complemental strand, 37014846 - 37014747
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    |||| |||||||||||||||||  || |||||||| ||||||||||||| ||| ||||| | ||       |||||||| ||||||||||||||||||||    
T  37014846 caattaagactctttgtcatttagaagaagtcttgtggtattcaatcaatattcttcatcacttaaaaaaagtcttgtgatattcaaaatcattcaaatt 37014747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 19 - 69
Target Start/End: Complemental strand, 50192757 - 50192707
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 69  Q
    ||||||||| || |||||||||||||||||||||| |||||||||||||||    
T  50192757 caatcaagattccttgtcattttaaaaaagtcttgtggtattcaatcaaga 50192707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 118 - 166
Target Start/End: Original strand, 6312742 - 6312792
Alignment:
Q  118 tcttttatgaaaagatga--tttcttgagattgtttttattttaaaagtta 166  Q
    ||||| ||||||||||||  |||||||||||||||||||||||||||||||    
T  6312742 tctttcatgaaaagatgagatttcttgagattgtttttattttaaaagtta 6312792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 118 - 166
Target Start/End: Original strand, 25612325 - 25612375
Alignment:
Q  118 tcttttatgaaaagatga--tttcttgagattgtttttattttaaaagtta 166  Q
    ||||| ||||||||||||  |||||||||||||||||||||||||||||||    
T  25612325 tctttcatgaaaagatgagatttcttgagattgtttttattttaaaagtta 25612375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 19 - 69
Target Start/End: Original strand, 953813 - 953863
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 69  Q
    ||||||||| |||||||||||| |||||||||||| ||||||| |||||||    
T  953813 caatcaagattctttgtcatttaaaaaaagtcttgtggtattcgatcaaga 953863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 19 - 118
Target Start/End: Complemental strand, 35679334 - 35679235
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| |||||||||||| |||||| |||||  |||||||||||||| | || || | ||       ||| |||||||||||||||||||||||||    
T  35679334 caatcaagattctttgtcatttaaaaaaaatcttgtagtattcaatcaagactcttaatcacttaaaaaaagtcatgtggtattcaaaatcattcaaatt 35679235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 63
Target Start/End: Complemental strand, 6304459 - 6304415
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaa 63  Q
    ||||||||| |||||||||||| |||||||||||| |||||||||    
T  6304459 caatcaagattctttgtcatttaaaaaaagtcttgtggtattcaa 6304415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 28824620 - 28824568
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    ||||||||||||||| | |||| |||||||||||| | |||||||||||||||    
T  28824620 caatcaagactctttctaatttaaaaaaagtcttgtgttattcaatcaagatt 28824568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 67
Target Start/End: Complemental strand, 47654558 - 47654510
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaa 67  Q
    ||||||||| |||||||||||| ||| |||||||| |||||||||||||    
T  47654558 caatcaagattctttgtcatttaaaagaagtcttgtggtattcaatcaa 47654510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 63
Target Start/End: Original strand, 47784423 - 47784466
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaa 63  Q
    ||||||||||||||||||| ||||||||||||||| |||||||||    
T  47784423 caatcaagactctttgtca-tttaaaaaagtcttgtggtattcaa 47784466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 49198515 - 49198464
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    ||||||||||||||| ||| ||||||||||||||| | |||||||||||||||    
T  49198515 caatcaagactcttt-tcaatttaaaaaagtcttgtgttattcaatcaagatt 49198464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 118 - 162
Target Start/End: Complemental strand, 9322532 - 9322486
Alignment:
Q  118 tcttttatgaaaagatga--tttcttgagattgtttttattttaaaa 162  Q
    ||||| ||||||||||||  |||||||||||||||||||||||||||    
T  9322532 tctttcatgaaaagatgagatttcttgagattgtttttattttaaaa 9322486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 118 - 166
Target Start/End: Complemental strand, 15835085 - 15835035
Alignment:
Q  118 tcttttatgaaaagatga--tttcttgagattgtttttattttaaaagtta 166  Q
    ||||| ||||||||||||  |||||||||||||||||| ||||||||||||    
T  15835085 tctttcatgaaaagatgagatttcttgagattgtttttgttttaaaagtta 15835035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 118 - 166
Target Start/End: Complemental strand, 29396420 - 29396370
Alignment:
Q  118 tcttttatgaaaagatga--tttcttgagattgtttttattttaaaagtta 166  Q
    ||||| ||||||||||||  |||||||||||||||||| ||||||||||||    
T  29396420 tctttcatgaaaagatgagatttcttgagattgtttttgttttaaaagtta 29396370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 118 - 166
Target Start/End: Complemental strand, 38536131 - 38536081
Alignment:
Q  118 tcttttatgaaaagatga--tttcttgagattgtttttattttaaaagtta 166  Q
    ||||| ||||||||||||  |||||||||||||||||| ||||||||||||    
T  38536131 tctttcatgaaaagatgagatttcttgagattgtttttcttttaaaagtta 38536081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 118 - 166
Target Start/End: Complemental strand, 38558349 - 38558299
Alignment:
Q  118 tcttttatgaaaagatga--tttcttgagattgtttttattttaaaagtta 166  Q
    ||||| ||||||||||||  |||||||||||||||||| ||||||||||||    
T  38558349 tctttcatgaaaagatgagatttcttgagattgtttttcttttaaaagtta 38558299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 74
Target Start/End: Original strand, 48524271 - 48524326
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagattttt 74  Q
    |||||||||||||||   |||| |||||||||||| | ||||||||||||||||||    
T  48524271 caatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagattttt 48524326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 118 - 166
Target Start/End: Original strand, 51701748 - 51701798
Alignment:
Q  118 tcttttatgaaaagatga--tttcttgagattgtttttattttaaaagtta 166  Q
    ||||| ||||||||||||  ||| |||||||||||||||||||||||||||    
T  51701748 tctttcatgaaaagatgagattttttgagattgtttttattttaaaagtta 51701798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 69
Target Start/End: Complemental strand, 15835301 - 15835251
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 69  Q
    ||||||||||| ||||  |||| |||||||||||| |||||||||||||||    
T  15835301 caatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaaga 15835251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 69
Target Start/End: Complemental strand, 19452098 - 19452048
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 69  Q
    |||||||||||||||   |||| |||||||||||| |||||||||||||||    
T  19452098 caatcaagactctttccaatttaaaaaaagtcttgtggtattcaatcaaga 19452048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 69
Target Start/End: Original strand, 25612109 - 25612159
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 69  Q
    ||||||||||| ||||  |||| |||||||||||| |||||||||||||||    
T  25612109 caatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaaga 25612159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 118
Target Start/End: Complemental strand, 32589159 - 32589060
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||| |||||  | || | ||||| || |||||||||||| | ||||| | ||       |||||||||||||||||||||||||||||    
T  32589159 caatcaagactctttatcattaaacaagaatcttgtggcattcaatcaagactcttcatcacttaaaagaagtcttgtggtattcaaaatcattcaaatt 32589060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 37 - 74
Target Start/End: Original strand, 10896845 - 10896882
Alignment:
Q  37 attttaaaaaagtcttgaggtattcaatcaagattttt 74  Q
    |||||||||||||||| |||||||||||||||| ||||    
T  10896845 attttaaaaaagtctttaggtattcaatcaagactttt 10896882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 49198474 - 49198429
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaat 64  Q
    ||||||||| |||||||||||| |||||||| ||| ||||||||||    
T  49198474 caatcaagattctttgtcatttaaaaaaagttttgtggtattcaat 49198429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 730100 - 730152
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    |||||||||||||||   |||| |||||||||||| | |||||||||||||||    
T  730100 caatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagatt 730152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 953771 - 953823
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    |||||||||||||||   |||| |||||||||||| | |||||||||||||||    
T  953771 caatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagatt 953823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 74
Target Start/End: Complemental strand, 1928442 - 1928406
Alignment:
Q  38 ttttaaaaaagtcttgaggtattcaatcaagattttt 74  Q
    ||||||||||||||| |||||||||||||||| ||||    
T  1928442 ttttaaaaaagtctttaggtattcaatcaagactttt 1928406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 14494161 - 14494213
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    |||||||||||||||   |||| |||||||||||| | |||||||||||||||    
T  14494161 caatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagatt 14494213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 19452056 - 19452004
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    |||||||||||||||   |||| |||||||||||| | |||||||||||||||    
T  19452056 caatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagatt 19452004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 166
Target Start/End: Complemental strand, 28387407 - 28387375
Alignment:
Q  134 gatttcttgagattgtttttattttaaaagtta 166  Q
    |||||||||||||||||||| ||||||||||||    
T  28387407 gatttcttgagattgtttttgttttaaaagtta 28387375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 28387641 - 28387589
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    ||||||||||| ||||  |||| |||||||||||  |||||||||||||||||    
T  28387641 caatcaagactttttgcaatttaaaaaaagtcttttggtattcaatcaagatt 28387589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 165
Target Start/End: Original strand, 29219450 - 29219493
Alignment:
Q  124 atgaaaagatga--tttcttgagattgtttttattttaaaagtt 165  Q
    ||||||||||||  |||||||||||||||||| |||||||||||    
T  29219450 atgaaaagatgagatttcttgagattgtttttcttttaaaagtt 29219493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 67
Target Start/End: Original strand, 33025506 - 33025554
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaa 67  Q
    ||||||||| |||||| |||||| ||||| ||||| |||||||||||||    
T  33025506 caatcaagattctttgacatttttaaaaattcttgtggtattcaatcaa 33025554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 90 - 118
Target Start/End: Original strand, 33025578 - 33025606
Alignment:
Q  90 gtcttgtggtattcaaaatcattcaaatt 118  Q
    |||||||||||||||||||||||||||||    
T  33025578 gtcttgtggtattcaaaatcattcaaatt 33025606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 35679376 - 35679324
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    |||||||| ||||||   |||| |||||||||||| |||||||||||||||||    
T  35679376 caatcaaggctcttttcaatttaaaaaaagtcttgtggtattcaatcaagatt 35679324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 74
Target Start/End: Original strand, 36402293 - 36402329
Alignment:
Q  38 ttttaaaaaagtcttgaggtattcaatcaagattttt 74  Q
    ||||||||||||||| |||||||||||||||| ||||    
T  36402293 ttttaaaaaagtctttaggtattcaatcaagactttt 36402329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 163
Target Start/End: Complemental strand, 48177494 - 48177447
Alignment:
Q  118 tcttttatgaaaagatga--tttcttgagattgtttttattttaaaag 163  Q
    ||||| ||||||||||||  |||||||||||||||||| |||||||||    
T  48177494 tctttcatgaaaagatgagatttcttgagattgtttttcttttaaaag 48177447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 74
Target Start/End: Original strand, 52705439 - 52705475
Alignment:
Q  38 ttttaaaaaagtcttgaggtattcaatcaagattttt 74  Q
    ||||| |||||||||| ||||||||||||||||||||    
T  52705439 ttttataaaagtcttgtggtattcaatcaagattttt 52705475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 71; Significance: 3e-32; HSPs: 60)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 19 - 118
Target Start/End: Complemental strand, 14782340 - 14782241
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||       |||||||||||||||||||||||||||||    
T  14782340 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatt 14782241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 19 - 118
Target Start/End: Complemental strand, 18306166 - 18306067
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||       |||||||||||||||||||||||||||||    
T  18306166 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatt 18306067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 19 - 118
Target Start/End: Complemental strand, 19718086 - 19717987
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||       |||||||||||||||||||||||||||||    
T  19718086 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatt 19717987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 19 - 118
Target Start/End: Complemental strand, 39467673 - 39467574
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||       |||||||||||||||||||||||||||||    
T  39467673 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatt 39467574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 19 - 118
Target Start/End: Complemental strand, 44726015 - 44725916
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||       |||||||||||||||||||||||||||||    
T  44726015 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatt 44725916  T

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Target: chr8; HSP #6
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 19 - 118
Target Start/End: Original strand, 16362197 - 16362296
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||       |||| ||||||||||||||||||||||||    
T  16362197 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcattacttaaaaaaagtctcgtggtattcaaaatcattcaaatt 16362296  T

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Target: chr8; HSP #7
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 19 - 118
Target Start/End: Complemental strand, 18958932 - 18958833
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| ||||       |||||||||||||||||||||||||||||    
T  18958932 caatcaagactctttatcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatt 18958833  T

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Target: chr8; HSP #8
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 19 - 118
Target Start/End: Original strand, 31623696 - 31623795
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||       |||||||||||||||||||||||||||||    
T  31623696 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatt 31623795  T

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Target: chr8; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 19 - 118
Target Start/End: Complemental strand, 4031463 - 4031364
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| | ||       |||||||||||||||||||||||||||||    
T  4031463 caatcaagaatctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcataaattaaaaaaagtcttgtggtattcaaaatcattcaaatt 4031364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 19 - 118
Target Start/End: Original strand, 7466336 - 7466435
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||   ||       |||||||||||||||||||||||||||||    
T  7466336 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttaaaaaaagtcttgtggtattcaaaatcattcaaatt 7466435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 19 - 118
Target Start/End: Complemental strand, 9288662 - 9288563
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| | ||       |||||||||||||||||||||||||||||    
T  9288662 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaaaattttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatt 9288563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 19 - 118
Target Start/End: Original strand, 32497526 - 32497625
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||       |||||||||||||||||||||||||||||    
T  32497526 caatcaatactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatt 32497625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 19 - 118
Target Start/End: Complemental strand, 42305990 - 42305891
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||        |||||||||||||||||| |||||||||    
T  42305990 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaaatcttgtggtattcaaaataattcaaatt 42305891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 19 - 118
Target Start/End: Original strand, 26856067 - 26856167
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtc-ttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaat 117  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||| | ||       ||||||||||||||||||||||||||||    
T  26856067 caatcaagactctttgtcattttaaaaaagtctttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaat 26856166  T
Q  118 t 118  Q
    |    
T  26856167 t 26856167  T

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Target: chr8; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 19 - 118
Target Start/End: Complemental strand, 10295586 - 10295487
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    |||||||||||||| |||| || |||||||||||||||||||||||||||| ||||||| | ||       |||||||||||||||||||||||||||||    
T  10295586 caatcaagactcttcgtcacttaaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatt 10295487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 19 - 118
Target Start/End: Complemental strand, 2705024 - 2704925
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| |||||||||||| |||||||||||| ||||||||||||||| | || || | ||       |||| ||||||||||||||||||||||||    
T  2705024 caatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatt 2704925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 19 - 118
Target Start/End: Original strand, 4403108 - 4403207
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    |||||||||||| || ||||||||||||| |||||| ||||||||| |||||||||||| | ||        ||| ||||||||||||||||||||||||    
T  4403108 caatcaagactcattttcattttaaaaaaatcttgaagtattcaattaagatttttcatcacttaaaaaaaatctcgtggtattcaaaatcattcaaatt 4403207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 19 - 118
Target Start/End: Complemental strand, 26374635 - 26374536
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| |||||||||||| |||||||||||| ||||||||||||||| | || || | ||       |||| ||||||||||||||||||||||||    
T  26374635 caatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatt 26374536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 63
Target Start/End: Complemental strand, 43166853 - 43166809
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaa 63  Q
    ||||||||||||||||||||||||||||||||||| |||||||||    
T  43166853 caatcaagactctttgtcattttaaaaaagtcttgtggtattcaa 43166809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 19 - 69
Target Start/End: Complemental strand, 5576826 - 5576776
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 69  Q
    ||||||||| |||||||||||| |||||||||||| |||||||||||||||    
T  5576826 caatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaaga 5576776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 19 - 118
Target Start/End: Complemental strand, 10392442 - 10392343
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| ||||||||||||||||||| ||||| | ||||||||||||| |||| || | ||       |||| |||||||||| |||||||||||||    
T  10392442 caatcaagattctttgtcattttaaaaaattcttgtgatattcaatcaagacttttaatcacttaagaaaagtctagtggtattcagaatcattcaaatt 10392343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 19 - 118
Target Start/End: Complemental strand, 24502018 - 24501919
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| ||||| |||||| |||||||||||| ||||||||||||||| | || || | ||       |||| ||||||||||||||||||||||||    
T  24502018 caatcaagattctttatcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatt 24501919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 19 - 69
Target Start/End: Complemental strand, 32711487 - 32711437
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 69  Q
    ||||||||| |||||||||||| |||||||||||| |||||||||||||||    
T  32711487 caatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaaga 32711437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 19 - 69
Target Start/End: Original strand, 41479098 - 41479148
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 69  Q
    ||||||||| |||||||||||| |||||||||||| |||||||||||||||    
T  41479098 caatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaaga 41479148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 19 - 118
Target Start/End: Complemental strand, 42938322 - 42938223
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| | |||||||||| |||||||||||| ||||||||||||||| | || || | ||       |||| ||||||||||||||||||||||||    
T  42938322 caatcaagattatttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatt 42938223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 19 - 118
Target Start/End: Complemental strand, 43166895 - 43166796
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||| ||||  |||| |||||||||||| ||||||||||||||| | ||  | ||||       |||||||||||||||||||||||||||||    
T  43166895 caatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgtggtattcaaaatcattcaaatt 43166796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 19 - 118
Target Start/End: Original strand, 43959659 - 43959757
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| |||||||||||||||||||||||||  |||||||||||||||| || || | ||       | || ||||||||||||||||||||||||    
T  43959659 caatcaagattctttgtcattttaaaaaagtcttg-tgtattcaatcaagattcttaatcacttcaaaaaagactagtggtattcaaaatcattcaaatt 43959757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 118 - 166
Target Start/End: Complemental strand, 14782166 - 14782116
Alignment:
Q  118 tcttttatgaaaagatga--tttcttgagattgtttttattttaaaagtta 166  Q
    ||||| ||||||||||||  |||||||||||||||||||||||||||||||    
T  14782166 tctttcatgaaaagatgagatttcttgagattgtttttattttaaaagtta 14782116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 118 - 166
Target Start/End: Complemental strand, 19717912 - 19717862
Alignment:
Q  118 tcttttatgaaaagatga--tttcttgagattgtttttattttaaaagtta 166  Q
    ||||||||||||||||||  |||||||||||||||||| ||||||||||||    
T  19717912 tcttttatgaaaagatgagatttcttgagattgtttttgttttaaaagtta 19717862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 118 - 166
Target Start/End: Complemental strand, 44725841 - 44725791
Alignment:
Q  118 tcttttatgaaaagatga--tttcttgagattgtttttattttaaaagtta 166  Q
    ||||| ||||||||||||  |||||||||||||||||||||||||||||||    
T  44725841 tctttcatgaaaagatgagatttcttgagattgtttttattttaaaagtta 44725791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 19 - 69
Target Start/End: Complemental strand, 23115373 - 23115323
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 69  Q
    ||||||||| |||||||||||| ||||| |||||| |||||||||||||||    
T  23115373 caatcaagattctttgtcatttaaaaaatgtcttgtggtattcaatcaaga 23115323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 118 - 166
Target Start/End: Original strand, 7466500 - 7466550
Alignment:
Q  118 tcttttatgaaaagatga--tttcttgagattgtttttattttaaaagtta 166  Q
    ||||| ||||||||||||  |||||||||||||||||| ||||||||||||    
T  7466500 tctttcatgaaaagatgagatttcttgagattgtttttcttttaaaagtta 7466550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 118 - 166
Target Start/End: Complemental strand, 9288488 - 9288438
Alignment:
Q  118 tcttttatgaaaagatga--tttcttgagattgtttttattttaaaagtta 166  Q
    ||||| ||||||||||||  |||||||||||||||||| ||||||||||||    
T  9288488 tctttcatgaaaagatgagatttcttgagattgtttttcttttaaaagtta 9288438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 118 - 166
Target Start/End: Original strand, 16362361 - 16362411
Alignment:
Q  118 tcttttatgaaaagatga--tttcttgagattgtttttattttaaaagtta 166  Q
    |||||||| |||||||||  |||||||||||||||||| ||||||||||||    
T  16362361 tcttttataaaaagatgagatttcttgagattgtttttcttttaaaagtta 16362411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 118 - 166
Target Start/End: Original strand, 32497690 - 32497740
Alignment:
Q  118 tcttttatgaaaagatga--tttcttgagattgtttttattttaaaagtta 166  Q
    ||||| ||||||||||||  |||||||||||||||||| ||||||||||||    
T  32497690 tctttcatgaaaagatgagatttcttgagattgtttttcttttaaaagtta 32497740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 118 - 166
Target Start/End: Original strand, 37857284 - 37857334
Alignment:
Q  118 tcttttatgaaaagatga--tttcttgagattgtttttattttaaaagtta 166  Q
    ||||| ||||||||||||  |||||||||||||||||| ||||||||||||    
T  37857284 tctttcatgaaaagatgagatttcttgagattgtttttcttttaaaagtta 37857334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 69
Target Start/End: Complemental strand, 14782382 - 14782332
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 69  Q
    ||||||||||| ||||  |||| |||||||||||| |||||||||||||||    
T  14782382 caatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaaga 14782332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 69
Target Start/End: Complemental strand, 18958974 - 18958924
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 69  Q
    ||||||||||| ||||  |||| |||||||||||| |||||||||||||||    
T  18958974 caatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaaga 18958924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 69
Target Start/End: Complemental strand, 19718128 - 19718078
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 69  Q
    ||||||||||| ||||  |||| |||||||||||| |||||||||||||||    
T  19718128 caatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaaga 19718078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 65
Target Start/End: Original strand, 42937354 - 42937400
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatc 65  Q
    ||||||||| | |||||||||| |||||||||||| |||||||||||    
T  42937354 caatcaagattttttgtcatttaaaaaaagtcttgtggtattcaatc 42937400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 69
Target Start/End: Complemental strand, 44726057 - 44726007
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 69  Q
    ||||||||||| ||||  |||| |||||||||||| |||||||||||||||    
T  44726057 caatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaaga 44726007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 41 - 74
Target Start/End: Original strand, 14061595 - 14061628
Alignment:
Q  41 taaaaaagtcttgaggtattcaatcaagattttt 74  Q
    ||||||||||||| ||||||||||||||||||||    
T  14061595 taaaaaagtcttgtggtattcaatcaagattttt 14061628  T

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Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 124 - 166
Target Start/End: Original strand, 31623856 - 31623900
Alignment:
Q  124 atgaaaagat--gatttcttgagattgtttttattttaaaagtta 166  Q
    ||||||||||  |||||||||||||||||||| ||||||||||||    
T  31623856 atgaaaagataagatttcttgagattgtttttcttttaaaagtta 31623900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 39190018 - 39189973
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaat 64  Q
    ||||||||||||||||  |||| |||||||||||| ||||||||||    
T  39190018 caatcaagactctttgcaatttaaaaaaagtcttgtggtattcaat 39189973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 74
Target Start/End: Complemental strand, 1606051 - 1606015
Alignment:
Q  38 ttttaaaaaagtcttgaggtattcaatcaagattttt 74  Q
    ||||| |||||||||| ||||||||||||||||||||    
T  1606051 ttttataaaagtcttgtggtattcaatcaagattttt 1606015  T

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Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 74
Target Start/End: Original strand, 2112837 - 2112873
Alignment:
Q  38 ttttaaaaaagtcttgaggtattcaatcaagattttt 74  Q
    ||||| |||||||||| ||||||||||||||||||||    
T  2112837 ttttataaaagtcttgtggtattcaatcaagattttt 2112873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 69
Target Start/End: Complemental strand, 4031503 - 4031455
Alignment:
Q  21 atcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 69  Q
    ||||||||| ||||  |||| |||||||||||| |||||||||||||||    
T  4031503 atcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaaga 4031455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 5576868 - 5576816
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    |||||||||||||||   |||| |||||||||||| | |||||||||||||||    
T  5576868 caatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagatt 5576816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 23115415 - 23115363
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    |||||||||||||||   |||| |||||||||||| | |||||||||||||||    
T  23115415 caatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagatt 23115363  T

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Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 166
Target Start/End: Original strand, 26856260 - 26856292
Alignment:
Q  134 gatttcttgagattgtttttattttaaaagtta 166  Q
    |||||||||||||||||||| ||||||||||||    
T  26856260 gatttcttgagattgtttttcttttaaaagtta 26856292  T

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Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 74
Target Start/End: Complemental strand, 29260314 - 29260278
Alignment:
Q  38 ttttaaaaaagtcttgaggtattcaatcaagattttt 74  Q
    ||||| |||||||||| ||||||||||||||||||||    
T  29260314 ttttataaaagtcttgtggtattcaatcaagattttt 29260278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 32711529 - 32711477
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    |||||||||||||||   |||| |||||||||||| | |||||||||||||||    
T  32711529 caatcaagactcttttcaatttaaaaaaagtcttgtgttattcaatcaagatt 32711477  T

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Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 74
Target Start/End: Original strand, 35142088 - 35142124
Alignment:
Q  38 ttttaaaaaagtcttgaggtattcaatcaagattttt 74  Q
    |||||||||||||||| ||||||||||||| ||||||    
T  35142088 ttttaaaaaagtcttgtggtattcaatcaaaattttt 35142124  T

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Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 73
Target Start/End: Complemental strand, 38806914 - 38806882
Alignment:
Q  41 taaaaaagtcttgaggtattcaatcaagatttt 73  Q
    ||||||| |||||||||||||||||||||||||    
T  38806914 taaaaaaatcttgaggtattcaatcaagatttt 38806882  T

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Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 74
Target Start/End: Complemental strand, 41386908 - 41386872
Alignment:
Q  38 ttttaaaaaagtcttgaggtattcaatcaagattttt 74  Q
    ||||| |||||||||| ||||||||||||||||||||    
T  41386908 ttttataaaagtcttgtggtattcaatcaagattttt 41386872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 74
Target Start/End: Original strand, 42275018 - 42275054
Alignment:
Q  38 ttttaaaaaagtcttgaggtattcaatcaagattttt 74  Q
    ||||| |||||||||| ||||||||||||||||||||    
T  42275018 ttttataaaagtcttgtggtattcaatcaagattttt 42275054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 42735524 - 42735472
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    |||||||||||||||   |||| |||||||||||| | |||||||||||||||    
T  42735524 caatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagatt 42735472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 42938364 - 42938312
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    |||||||||||||||   |||| |||||||||||| | |||||||||||||||    
T  42938364 caatcaagactcttttcaatttaaaaaaagtcttgtgttattcaatcaagatt 42938312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 74
Target Start/End: Complemental strand, 43605402 - 43605366
Alignment:
Q  38 ttttaaaaaagtcttgaggtattcaatcaagattttt 74  Q
    ||||| |||||||||| ||||||||||||||||||||    
T  43605402 ttttataaaagtcttgtggtattcaatcaagattttt 43605366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 43959617 - 43959669
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    |||||||||||||||   |||| |||||||||||| | |||||||||||||||    
T  43959617 caatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagatt 43959669  T

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Target: chr7 (Bit Score: 71; Significance: 3e-32; HSPs: 82)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 19 - 118
Target Start/End: Original strand, 23101293 - 23101392
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||       |||||||||||||||||||||||||||||    
T  23101293 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatt 23101392  T

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Target: chr7; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 19 - 118
Target Start/End: Original strand, 37327922 - 37328021
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||       |||||||||||||||||||||||||||||    
T  37327922 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcattacttaaaaaaagtcttgtggtattcaaaatcattcaaatt 37328021  T

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Target: chr7; HSP #3
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 19 - 118
Target Start/End: Original strand, 509651 - 509750
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||| ||||       |||||||||||||||||||||||||||||    
T  509651 caatcaagactatttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatt 509750  T

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Target: chr7; HSP #4
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 19 - 118
Target Start/End: Original strand, 3022921 - 3023020
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| | ||       |||||||||||||||||||||||||||||    
T  3022921 caatcaagactttttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatt 3023020  T

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Target: chr7; HSP #5
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 19 - 118
Target Start/End: Complemental strand, 9882441 - 9882342
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||       |||||||||||||||||||||||||||||    
T  9882441 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatt 9882342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 19 - 118
Target Start/End: Original strand, 28342342 - 28342441
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||| ||||       |||||||||||||||||||||||||||||    
T  28342342 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcgagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatt 28342441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 19 - 118
Target Start/End: Complemental strand, 29614969 - 29614870
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||       |||||||| ||||||||||||||||||||    
T  29614969 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtgatattcaaaatcattcaaatt 29614870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 19 - 118
Target Start/End: Original strand, 39784094 - 39784193
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||       ||||||||||||||||||||||| |||||    
T  39784094 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcatttaaatt 39784193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 19 - 118
Target Start/End: Original strand, 12963696 - 12963795
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||       |||| ||||||| ||||||||||||||||    
T  12963696 caatcaagactctttgtcattttaaaaaagtcttgagatattcaatcaagatttttcattacttaaaaaaagtctcgtggtatccaaaatcattcaaatt 12963795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 19 - 118
Target Start/End: Original strand, 19251534 - 19251633
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| | ||       |||| ||||||||||||||||||||||||    
T  19251534 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaaatttttcatcacttaaaaaaagtctcgtggtattcaaaatcattcaaatt 19251633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 19 - 118
Target Start/End: Complemental strand, 33892455 - 33892356
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||       |||||||||||||||||||||||||||||    
T  33892455 caatcaacactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaacaaagtcttgtggtattcaaaatcattcaaatt 33892356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 19 - 118
Target Start/End: Complemental strand, 44122105 - 44122006
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||        ||||||||||||||||||||||||||||    
T  44122105 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaaatcttgtggtattcaaaatcattcaaatt 44122006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 19 - 118
Target Start/End: Complemental strand, 46405636 - 46405537
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| | ||       |||||||||||||||||||||||||||||    
T  46405636 caatcaagactctttgtcgttttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatt 46405537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 19 - 118
Target Start/End: Complemental strand, 3797262 - 3797163
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||       |||||||||||||||| |||||| |||||    
T  3797262 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaagatcattaaaatt 3797163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 20 - 118
Target Start/End: Original strand, 10068462 - 10068561
Alignment:
Q  20 aatcaagactctttgtcattttaaaaaagtc-ttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||| | ||       |||||||||||||||||||||||||||||    
T  10068462 aatcaagactctttgccattttaaaaaagtctttgaggtattcaatcaagatttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatt 10068561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 19 - 118
Target Start/End: Original strand, 12740368 - 12740467
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| ||||||||||||| |||||||||||||||||| |||||||||||||||| ||||       |||| ||||||||||||||||||||||||    
T  12740368 caatcaagattctttgtcatttttaaaaagtcttgaggtatttaatcaagatttttcatcatttaaaaaaagtctcgtggtattcaaaatcattcaaatt 12740467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 19 - 118
Target Start/End: Original strand, 18838384 - 18838483
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||   ||       |||||||||||||||||||||||||||||    
T  18838384 caatcaagactctttgtaattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttaaaaaaagtcttgtggtattcaaaatcattcaaatt 18838483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 19 - 118
Target Start/End: Complemental strand, 40460912 - 40460813
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    |||| |||||||||||||||||||||||||||||||| ||||||||||||| ||||||| | ||       |||||||||||||||||||||||||||||    
T  40460912 caattaagactctttgtcattttaaaaaagtcttgagatattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatt 40460813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 19 - 112
Target Start/End: Original strand, 8675328 - 8675421
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcatt 112  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||       |||||||||||||||||||||||    
T  8675328 caatcaaaactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcatt 8675421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 19 - 118
Target Start/End: Original strand, 7993137 - 7993236
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||| | ||||||| | ||       ||||| |||||||||||||||||||||||    
T  7993137 caatcaagactctttgccattttaaaaaagtcttgaggtattcaatcaaaacttttcatcacttaaaaaaagtcttatggtattcaaaatcattcaaatt 7993236  T

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Target: chr7; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 19 - 118
Target Start/End: Complemental strand, 28035010 - 28034911
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||| ||||||||||||||||||||||||| ||||||||||||| ||||||| | ||       ||||||||||||||||||| |||||||||    
T  28035010 caatcaagactttttgtcattttaaaaaagtcttgagatattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaattattcaaatt 28034911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 19 - 118
Target Start/End: Original strand, 32883777 - 32883876
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||| |||||||||||||||||||||||| ||||||||| |||| ||||||| | ||       |||||||||||||||||||||||||||||    
T  32883777 caatcaagactttttgtcattttaaaaaagtcttgaagtattcaattaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatt 32883876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 19 - 77
Target Start/End: Original strand, 33382632 - 33382690
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcat 77  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  33382632 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcat 33382690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 19 - 118
Target Start/End: Original strand, 39028092 - 39028191
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||| | ||       |||||||| ||||||||||| ||||||||    
T  39028092 caatcaagactctttgtcattttaaaaaagtcttgagatattcaatcaagacttttcatcacttaaaaaaagtcttgtgttattcaaaatcgttcaaatt 39028191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 19 - 77
Target Start/End: Complemental strand, 17001228 - 17001170
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcat 77  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| |||| |||||||    
T  17001228 caatcaagactctttgtcatttttaaaaagtcttgaggtattcaataaagacttttcat 17001170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 19 - 118
Target Start/End: Original strand, 29585510 - 29585608
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||| | |||| || | ||       ||||| |||||||||||||||||||||||    
T  29585510 caatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaaaactttt-atcacttaaaaaaagtcttctggtattcaaaatcattcaaatt 29585608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 19 - 77
Target Start/End: Original strand, 29893076 - 29893134
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcat 77  Q
    ||||||||||||||||||||||||||| |||| |||||||||||||||||| |||||||    
T  29893076 caatcaagactctttgtcattttaaaacagtcatgaggtattcaatcaagacttttcat 29893134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 20 - 118
Target Start/End: Complemental strand, 44256970 - 44256872
Alignment:
Q  20 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    |||||||||| ||||||||||||||||| |||| |||||||||||||||| ||||||| | ||       || | ||||||||||||||||||||||||    
T  44256970 aatcaagactttttgtcattttaaaaaaatcttaaggtattcaatcaagacttttcatcacttaaaaaaagtatcgtggtattcaaaatcattcaaatt 44256872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 19 - 108
Target Start/End: Original strand, 41827309 - 41827398
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaat 108  Q
    ||||||||||| ||||||||||||||||| ||||||||| ||||||||||| ||||||| | ||       |||||||||||||||||||    
T  41827309 caatcaagactttttgtcattttaaaaaaatcttgaggtgttcaatcaagacttttcataacttaaaaaaagtcttgtggtattcaaaat 41827398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 19 - 118
Target Start/End: Original strand, 47066698 - 47066798
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcatta-tttnnnnnnngtcttgtggtattcaaaatcattcaaat 117  Q
    ||||||| |||||||||||||||||||||||||||| |||||||||||| |  |||||| | ||        ||||||||||||||||||||||||||||    
T  47066698 caatcaaaactctttgtcattttaaaaaagtcttgacgtattcaatcaaaaaatttcatcacttaaaaaaaagtcttgtggtattcaaaatcattcaaat 47066797  T
Q  118 t 118  Q
    |    
T  47066798 t 47066798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 19 - 69
Target Start/End: Complemental strand, 48117798 - 48117748
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 69  Q
    |||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  48117798 caatcaagactctttgtcatttttgaaaagtcttgaggtattcaatcaaga 48117748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 19 - 69
Target Start/End: Original strand, 973186 - 973236
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 69  Q
    ||||||||| |||||||||||| |||||||||||| |||||||||||||||    
T  973186 caatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaaga 973236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 19 - 118
Target Start/End: Original strand, 30440798 - 30440897
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| |||||||||||| |||||| ||||| ||||||||||||||| | || || | ||       |||| ||||||||||||||||||||||||    
T  30440798 caatcaagattctttgtcatttaaaaaaaatcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatt 30440897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 19 - 69
Target Start/End: Complemental strand, 40996854 - 40996804
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 69  Q
    ||||||||| |||||||||||| |||||||||||| |||||||||||||||    
T  40996854 caatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaaga 40996804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 19 - 118
Target Start/End: Complemental strand, 43581295 - 43581196
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| |||||||||||| ||||||||||||  |||||||||||||| | || || | ||       |||| ||||||||||||||||||||||||    
T  43581295 caatcaagattctttgtcatttaaaaaaagtcttgttgtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatt 43581196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 19 - 69
Target Start/End: Complemental strand, 44623481 - 44623431
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 69  Q
    |||||||||||||||||||||| |||||||||||| |||||| ||||||||    
T  44623481 caatcaagactctttgtcatttaaaaaaagtcttgtggtatttaatcaaga 44623431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 118 - 166
Target Start/End: Original strand, 509815 - 509865
Alignment:
Q  118 tcttttatgaaaagatga--tttcttgagattgtttttattttaaaagtta 166  Q
    ||||| ||||||||||||  |||||||||||||||||||||||||||||||    
T  509815 tctttcatgaaaagatgagatttcttgagattgtttttattttaaaagtta 509865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 118 - 166
Target Start/End: Original strand, 23101467 - 23101517
Alignment:
Q  118 tcttttatgaaaagatga--tttcttgagattgtttttattttaaaagtta 166  Q
    ||||| ||||||||||||  |||||||||||||||||||||||||||||||    
T  23101467 tctttcatgaaaagatgagatttcttgagattgtttttattttaaaagtta 23101517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 118 - 166
Target Start/End: Original strand, 28342516 - 28342566
Alignment:
Q  118 tcttttatgaaaagatga--tttcttgagattgtttttattttaaaagtta 166  Q
    ||||| ||||||||||||  |||||||||||||||||||||||||||||||    
T  28342516 tctttcatgaaaagatgagatttcttgagattgtttttattttaaaagtta 28342566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 118 - 166
Target Start/End: Original strand, 39784268 - 39784318
Alignment:
Q  118 tcttttatgaaaagatga--tttcttgagattgtttttattttaaaagtta 166  Q
    ||||| ||||||||||||  |||||||||||||||||||||||||||||||    
T  39784268 tctttcatgaaaagatgagatttcttgagattgtttttattttaaaagtta 39784318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 31 - 73
Target Start/End: Original strand, 10616955 - 10616997
Alignment:
Q  31 tttgtcattttaaaaaagtcttgaggtattcaatcaagatttt 73  Q
    ||||||||||| ||||||||||||||||||| |||||||||||    
T  10616955 tttgtcatttttaaaaagtcttgaggtattcgatcaagatttt 10616997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 19 - 69
Target Start/End: Original strand, 12893410 - 12893460
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 69  Q
    ||||||||| |||||||||||| |||||||||||| |||||| ||||||||    
T  12893410 caatcaagattctttgtcatttaaaaaaagtcttgtggtatttaatcaaga 12893460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 19 - 118
Target Start/End: Complemental strand, 18914940 - 18914841
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||| | |||||||| ||| |||||||||||| ||||||||||||||| | || || | ||       |||| ||||||||||||||||||||||||    
T  18914940 caatcaaaattctttgtcctttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatt 18914841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 19 - 118
Target Start/End: Complemental strand, 20275468 - 20275369
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| || ||||||||| |||||||||||  ||||||||||||||| | || || | ||       ||||| |||||||||||||||||||||||    
T  20275468 caatcaagattccttgtcatttaaaaaaagtcttatggtattcaatcaagactcttaatcacttaaaaaaagtcttatggtattcaaaatcattcaaatt 20275369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 19 - 69
Target Start/End: Complemental strand, 44343601 - 44343551
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 69  Q
    ||||||||| |||||||||||| |||||||||||| | |||||||||||||    
T  44343601 caatcaagattctttgtcatttaaaaaaagtcttgtgatattcaatcaaga 44343551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 19 - 69
Target Start/End: Original strand, 47879170 - 47879220
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 69  Q
    ||||||||| |||||||||||| ||||||||| || |||||||||||||||    
T  47879170 caatcaagattctttgtcatttaaaaaaagtcatgtggtattcaatcaaga 47879220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 19 - 69
Target Start/End: Original strand, 47914268 - 47914318
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 69  Q
    ||||||||| |||||||||||| ||||||||| || |||||||||||||||    
T  47914268 caatcaagattctttgtcatttaaaaaaagtcatgtggtattcaatcaaga 47914318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 77
Target Start/End: Complemental strand, 10676624 - 10676567
Alignment:
Q  20 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcat 77  Q
    |||||||||||||||  |||| ||||| |||||| ||||||||||||||| |||||||    
T  10676624 aatcaagactctttgcaatttaaaaaaggtcttgtggtattcaatcaagacttttcat 10676567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 67
Target Start/End: Original strand, 34009014 - 34009062
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaa 67  Q
    ||||||||| | |||||||||| |||||||||||| |||||||||||||    
T  34009014 caatcaagattatttgtcatttaaaaaaagtcttgtggtattcaatcaa 34009062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 118 - 166
Target Start/End: Original strand, 7993311 - 7993361
Alignment:
Q  118 tcttttatgaaaagat--gatttcttgagattgtttttattttaaaagtta 166  Q
    ||||| ||||||||||  |||||||||||||||||||| ||||||||||||    
T  7993311 tctttcatgaaaagataagatttcttgagattgtttttcttttaaaagtta 7993361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 119
Target Start/End: Original strand, 9179875 - 9179975
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| |||||||||||| |||||||| |||  |||||||||||||| | ||||| | ||       |||||||||||| |||||||| | |||||    
T  9179875 caatcaagattctttgtcatttaaaaaaagttttgtcgtattcaatcaagactcttcatcacttaaaaaaagtcttgtggtatacaaaatcacttaaatt 9179974  T
Q  119 c 119  Q
    |    
T  9179975 c 9179975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 118 - 166
Target Start/End: Complemental strand, 29614795 - 29614745
Alignment:
Q  118 tcttttatgaaaagatga--tttcttgagattgtttttattttaaaagtta 166  Q
    ||||| ||||||||||||  |||||||||||| ||||||||||||||||||    
T  29614795 tctttcatgaaaagatgagatttcttgagattatttttattttaaaagtta 29614745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 69
Target Start/End: Complemental strand, 7719453 - 7719415
Alignment:
Q  31 tttgtcattttaaaaaagtcttgaggtattcaatcaaga 69  Q
    |||||||||| |||||||||||| |||||||||||||||    
T  7719453 tttgtcatttaaaaaaagtcttgtggtattcaatcaaga 7719415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 118 - 161
Target Start/End: Original strand, 8675502 - 8675547
Alignment:
Q  118 tcttttatgaaaagatga--tttcttgagattgtttttattttaaa 161  Q
    ||||||||||||||||||  |||||||||||||||||| |||||||    
T  8675502 tcttttatgaaaagatgagatttcttgagattgtttttcttttaaa 8675547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 69
Target Start/End: Original strand, 12963654 - 12963704
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 69  Q
    ||||||||||||||||  | || |||||||||||| |||||||||||||||    
T  12963654 caatcaagactctttgcaacttaaaaaaagtcttgtggtattcaatcaaga 12963704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 69
Target Start/End: Original strand, 19251492 - 19251542
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 69  Q
    ||||||||||||||||  | || |||||||||||| |||||||||||||||    
T  19251492 caatcaagactctttgcaacttaaaaaaagtcttgtggtattcaatcaaga 19251542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 77
Target Start/End: Original strand, 25805687 - 25805745
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcat 77  Q
    ||||||||| ||||||| |||| |||||| ||| | ||||||||||||| |||||||||    
T  25805687 caatcaagattctttgtaatttaaaaaaaatctagtggtattcaatcaaaatttttcat 25805745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 69
Target Start/End: Complemental strand, 29615011 - 29614961
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 69  Q
    ||||||||||| ||||  |||| |||||||||||| |||||||||||||||    
T  29615011 caatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaaga 29614961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 69
Target Start/End: Original strand, 34695191 - 34695241
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 69  Q
    |||||||||||||||   |||| |||||||||||| |||||||||||||||    
T  34695191 caatcaagactctttccaatttaaaaaaagtcttgtggtattcaatcaaga 34695241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 69
Target Start/End: Original strand, 34695275 - 34695325
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 69  Q
    ||||||||| || ||||||||| |||||||| ||| |||||||||||||||    
T  34695275 caatcaagattccttgtcatttaaaaaaagttttgtggtattcaatcaaga 34695325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 69
Target Start/End: Original strand, 39784052 - 39784102
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 69  Q
    ||||||||||| ||||  |||| |||||||||||| |||||||||||||||    
T  39784052 caatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaaga 39784102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 124 - 166
Target Start/End: Original strand, 3023101 - 3023145
Alignment:
Q  124 atgaaaagatga--tttcttgagattgtttttattttaaaagtta 166  Q
    ||||||||||||  |||||||||||||||||| ||||||||||||    
T  3023101 atgaaaagatgagatttcttgagattgtttttcttttaaaagtta 3023145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 124 - 166
Target Start/End: Original strand, 18838564 - 18838608
Alignment:
Q  124 atgaaaagatga--tttcttgagattgtttttattttaaaagtta 166  Q
    ||||||||||||  |||||||||||||||||| ||||||||||||    
T  18838564 atgaaaagatgagatttcttgagattgtttttcttttaaaagtta 18838608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 43187590 - 43187545
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaat 64  Q
    ||||||||||||||||| |||| |||||||||||  ||||||||||    
T  43187590 caatcaagactctttgtaatttaaaaaaagtcttatggtattcaat 43187545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 67
Target Start/End: Original strand, 727514 - 727562
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaa 67  Q
    ||||||| | |||||||||||| |||||||||||| | |||||||||||    
T  727514 caatcaaaattctttgtcatttaaaaaaagtcttgtgatattcaatcaa 727562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 166
Target Start/End: Complemental strand, 9882250 - 9882218
Alignment:
Q  134 gatttcttgagattgtttttattttaaaagtta 166  Q
    |||||||||||||||||||| ||||||||||||    
T  9882250 gatttcttgagattgtttttcttttaaaagtta 9882218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 12893368 - 12893420
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    |||||||||||||||   |||| |||||||||||| | |||||||||||||||    
T  12893368 caatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagatt 12893420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 67
Target Start/End: Complemental strand, 18914982 - 18914934
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaa 67  Q
    |||||||||||||||   ||||||||||||||||| | |||||||||||    
T  18914982 caatcaagactctttccaattttaaaaaagtcttgtgttattcaatcaa 18914934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 74
Target Start/End: Complemental strand, 27418680 - 27418644
Alignment:
Q  38 ttttaaaaaagtcttgaggtattcaatcaagattttt 74  Q
    ||||| |||||||||| ||||||||||||||||||||    
T  27418680 ttttataaaagtcttgtggtattcaatcaagattttt 27418644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 30440756 - 30440808
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    |||||||||||||||   |||| |||||||||||| | |||||||||||||||    
T  30440756 caatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagatt 30440808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 73
Target Start/End: Original strand, 32630687 - 32630719
Alignment:
Q  41 taaaaaagtcttgaggtattcaatcaagatttt 73  Q
    ||||||| |||||||||||||||||||||||||    
T  32630687 taaaaaaatcttgaggtattcaatcaagatttt 32630719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 34008972 - 34009024
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    |||||||||||||||   |||| |||||||||||| | |||||||||||||||    
T  34008972 caatcaagactcttttcaatttaaaaaaagtcttgtgttattcaatcaagatt 34009024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 34695233 - 34695285
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    |||||||||||||||   |||| |||||||||||| | |||||||||||||||    
T  34695233 caatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagatt 34695285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 166
Target Start/End: Original strand, 39028274 - 39028306
Alignment:
Q  134 gatttcttgagattgtttttattttaaaagtta 166  Q
    |||||||||||||||||||| ||||||||||||    
T  39028274 gatttcttgagattgtttttcttttaaaagtta 39028306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 74
Target Start/End: Original strand, 40097140 - 40097176
Alignment:
Q  38 ttttaaaaaagtcttgaggtattcaatcaagattttt 74  Q
    ||||||||||||||| |||||||||||||||| ||||    
T  40097140 ttttaaaaaagtctttaggtattcaatcaagactttt 40097176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 166
Target Start/End: Complemental strand, 40460730 - 40460698
Alignment:
Q  134 gatttcttgagattgtttttattttaaaagtta 166  Q
    |||||||||||||||||||| ||||||||||||    
T  40460730 gatttcttgagattgtttttcttttaaaagtta 40460698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 166
Target Start/End: Original strand, 41827491 - 41827523
Alignment:
Q  134 gatttcttgagattgtttttattttaaaagtta 166  Q
    |||||||||||||||||||| ||||||||||||    
T  41827491 gatttcttgagattgtttttcttttaaaagtta 41827523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 43581337 - 43581285
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    |||||||||||||||   |||| |||||||||||| | |||||||||||||||    
T  43581337 caatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagatt 43581285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 44343643 - 44343591
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    |||||||||||||||   |||| |||||||||||| | |||||||||||||||    
T  44343643 caatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagatt 44343591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 166
Target Start/End: Complemental strand, 46405454 - 46405422
Alignment:
Q  134 gatttcttgagattgtttttattttaaaagtta 166  Q
    |||||||||||||||||||| ||||||||||||    
T  46405454 gatttcttgagattgtttttcttttaaaagtta 46405422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 47879128 - 47879180
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    ||||||| |||||||   ||||||||||||||||| | |||||||||||||||    
T  47879128 caatcaatactcttttcaattttaaaaaagtcttgtgttattcaatcaagatt 47879180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 47914226 - 47914278
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    ||||||| |||||||   ||||||||||||||||| | |||||||||||||||    
T  47914226 caatcaatactcttttcaattttaaaaaagtcttgtgttattcaatcaagatt 47914278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 71; Significance: 3e-32; HSPs: 79)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 19 - 118
Target Start/End: Original strand, 5441404 - 5441503
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||       |||||||||||||||||||||||||||||    
T  5441404 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatt 5441503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 19 - 118
Target Start/End: Original strand, 27768056 - 27768155
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||       |||||||||||||||||||||||||||||    
T  27768056 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatt 27768155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 19 - 118
Target Start/End: Complemental strand, 37828608 - 37828509
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||       |||||||||||||||||||||||||||||    
T  37828608 caatcaagactctttgtcatttttaaaaagtcttgaggtattcaatcaagatttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatt 37828509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 19 - 118
Target Start/End: Original strand, 54341144 - 54341243
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||       |||||||||||||||||||||||||||||    
T  54341144 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatt 54341243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 20 - 118
Target Start/End: Original strand, 32322092 - 32322190
Alignment:
Q  20 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||       |||||||||||||||||||||||||||||    
T  32322092 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcatcacttaaaaatagtcttgtggtattcaaaatcattcaaatt 32322190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 19 - 118
Target Start/End: Complemental strand, 30967505 - 30967406
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| | ||       |||||||||||||||||||||||||||||    
T  30967505 caatcaagactctttgtcattttaaaaaagttttgaggtattcaatcaagatttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatt 30967406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 19 - 118
Target Start/End: Original strand, 51320921 - 51321020
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||       |||||||||||||||||||||||||||||    
T  51320921 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatt 51321020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 19 - 118
Target Start/End: Original strand, 23987214 - 23987313
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||| | ||||||| | ||       |||||||||||||||||||||||||||||    
T  23987214 caatcaatactctttgtcattttaaaaaagtcttgaggtattcaatcaaaacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatt 23987313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 27 - 118
Target Start/End: Complemental strand, 29649865 - 29649774
Alignment:
Q  27 actctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||       |||||||||||||||||||||||||||||    
T  29649865 actctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatt 29649774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 19 - 118
Target Start/End: Original strand, 37915827 - 37915926
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||| | ||||||||||||||||||||||||||||||||||| ||||||| | ||       |||||||||||||||||||||||||||||    
T  37915827 caatcaagactctctatcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatt 37915926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 19 - 118
Target Start/End: Complemental strand, 49835019 - 49834920
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||| |||| |||||||||||||||||||| ||||||| | ||       |||||||||||||||||||||||||||||    
T  49835019 caatcaagactctttgtcattttaacaaaggcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatt 49834920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 19 - 118
Target Start/End: Original strand, 50018251 - 50018350
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||| | ||||       |||||||||||||||| ||||||||||||    
T  50018251 caatcaagactctttgtcattttaaaaaagtcttgaggtattccatcaagacttttcttcatttaaaaaaagtcttgtggtattcaagatcattcaaatt 50018350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 24 - 118
Target Start/End: Original strand, 12913229 - 12913323
Alignment:
Q  24 aagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||       ||||  |||||||||||||||||||||||    
T  12913229 aagactctttgtcattttaaaaaagtcttgaggtattcaatcaagctttttcatcatttaaaaaaagtctcatggtattcaaaatcattcaaatt 12913323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 19 - 118
Target Start/End: Original strand, 9163076 - 9163175
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    |||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||| |  |       |||||||| ||||||||||||||||||||    
T  9163076 caatcaagactctttgtcatttaaaaaaagtcttgtggtattcaatcaagatttttcatcacataaaaaaagtcttgtgatattcaaaatcattcaaatt 9163175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 19 - 118
Target Start/End: Complemental strand, 36479437 - 36479338
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||| | ||       |||| |||||||||||||| |||||||||    
T  36479437 caatcaaaactctttgtcattttaaaaaagtcttgaggtattcaattaagatttttcatcacttaaaaaaagtctcgtggtattcaaaattattcaaatt 36479338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 19 - 118
Target Start/End: Complemental strand, 49501717 - 49501618
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    |||||||||||||||||||||||||| || ||||||||||||||||||||| ||||||| | ||       ||||||||| |||||||||||||||||||    
T  49501717 caatcaagactctttgtcattttaaataaatcttgaggtattcaatcaagacttttcatcacttaaaaaatgtcttgtggcattcaaaatcattcaaatt 49501618  T

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Target: chr4; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 19 - 118
Target Start/End: Complemental strand, 49507782 - 49507683
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    |||||||||||||||||||||||||| || ||||||||||||||||||||| ||||||| | ||       ||||||||| |||||||||||||||||||    
T  49507782 caatcaagactctttgtcattttaaataaatcttgaggtattcaatcaagacttttcatcacttaaaaaatgtcttgtggcattcaaaatcattcaaatt 49507683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 19 - 118
Target Start/End: Complemental strand, 54853674 - 54853575
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||| |||||||||||||||||||| |||||||||||||| ||||||| | ||       ||||||||||||||||||| |||||||||    
T  54853674 caatcaagactctttttcattttaaaaaagtcttgaagtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaattattcaaatt 54853575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 19 - 118
Target Start/End: Complemental strand, 32684193 - 32684095
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    |||| |||| ||||||||||||||||||||| ||||||||||||||||||| ||||||| ||||       |||||||||||||||||||||||||||||    
T  32684193 caattaagattctttgtcattttaaaaaagtattgaggtattcaatcaagacttttcatcattt-aaaaaagtcttgtggtattcaaaatcattcaaatt 32684095  T

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Target: chr4; HSP #20
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 19 - 118
Target Start/End: Complemental strand, 39307459 - 39307360
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| | |||| |||||||||||||||||| ||||||||||||||||| ||||| ||||       ||||||||||||||| |||||||||||||    
T  39307459 caatcaagattttttgccattttaaaaaagtcttgtggtattcaatcaagattcttcatcatttaaaaaaagtcttgtggtattcataatcattcaaatt 39307360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 19 - 77
Target Start/End: Complemental strand, 44771060 - 44771001
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggt-attcaatcaagatttttcat 77  Q
    ||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||    
T  44771060 caatcaagactctttgtcattttaaaaaaatcttgaggtaattcaatcaagatttttcat 44771001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 19 - 118
Target Start/End: Original strand, 41725125 - 41725224
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||| |||||||||||||||||||||||||||| |||| ||||||||| ||||||| |  |       |||||||| ||||||||||||||||||||    
T  41725125 caatcaatactctttgtcattttaaaaaagtcttgatgtatgcaatcaagacttttcatcacctaaaaaaagtcttgtgatattcaaaatcattcaaatt 41725224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 19 - 118
Target Start/End: Original strand, 1112893 - 1112992
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| |||||||||||| |||||||||||| ||||||||||||||| | || || | ||       |||| ||||||||||||||||||||||||    
T  1112893 caatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatt 1112992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 19 - 77
Target Start/End: Original strand, 20021344 - 20021402
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcat 77  Q
    ||||||||| ||||||||||||||||||| |||||| |||||||||||||| |||||||    
T  20021344 caatcaagattctttgtcattttaaaaaaatcttgaagtattcaatcaagacttttcat 20021402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 19 - 118
Target Start/End: Original strand, 55302843 - 55302942
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| |||||||||||||||||||||| || ||||||||||||||| | || || | ||       |||| ||||||||||||||||||||||||    
T  55302843 caatcaagattctttgtcattttaaaaaagtcatgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatt 55302942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 67
Target Start/End: Complemental strand, 40537351 - 40537303
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaa 67  Q
    |||||||||||||||||||||| |||||||||||| |||||||||||||    
T  40537351 caatcaagactctttgtcatttaaaaaaagtcttgtggtattcaatcaa 40537303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 19 - 69
Target Start/End: Original strand, 22202015 - 22202065
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 69  Q
    ||||||||| |||||||||||| |||||||||||| |||||||||||||||    
T  22202015 caatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaaga 22202065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 19 - 69
Target Start/End: Complemental strand, 24131178 - 24131128
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 69  Q
    ||||||||| |||||||||||| |||||||||||| |||||||||||||||    
T  24131178 caatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaaga 24131128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 19 - 69
Target Start/End: Original strand, 25331131 - 25331181
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 69  Q
    ||||||||| |||||||||||| |||||||||||| |||||||||||||||    
T  25331131 caatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaaga 25331181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 19 - 118
Target Start/End: Original strand, 28370924 - 28371023
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||| |||||||||| |||||||||||||||||| ||||||||||| | |||| || | ||       ||||  |||||||||||||||||||||||    
T  28370924 caatcaaaactctttgtcgttttaaaaaagtcttgagatattcaatcaaaactttttatcacttaaataaagtctcatggtattcaaaatcattcaaatt 28371023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 43 - 118
Target Start/End: Original strand, 28483923 - 28483998
Alignment:
Q  43 aaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||| ||||||| | ||       |||| ||||||||||||||||||||||||    
T  28483923 aaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtctcgtggtattcaaaatcattcaaatt 28483998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 19 - 118
Target Start/End: Original strand, 28541698 - 28541797
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| |||||||||||| |||||||||| | ||||||||||||||| | || || | ||       |||| ||||||||||||||||||||||||    
T  28541698 caatcaagattctttgtcatttaaaaaaagtctcgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatt 28541797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 19 - 69
Target Start/End: Complemental strand, 41881289 - 41881239
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 69  Q
    ||||||||| |||||||||||| |||||||||||| |||||||||||||||    
T  41881289 caatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaaga 41881239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 19 - 69
Target Start/End: Complemental strand, 46635848 - 46635798
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 69  Q
    ||||||||| |||||||||||| |||||||||||| |||||||||||||||    
T  46635848 caatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaaga 46635798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 19 - 67
Target Start/End: Original strand, 12112945 - 12112993
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaa 67  Q
    ||||||||| |||||||||||| |||||||||||| |||||||||||||    
T  12112945 caatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaa 12112993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 118 - 166
Target Start/End: Original strand, 5441578 - 5441628
Alignment:
Q  118 tcttttatgaaaagatga--tttcttgagattgtttttattttaaaagtta 166  Q
    ||||| ||||||||||||  |||||||||||||||||||||||||||||||    
T  5441578 tctttcatgaaaagatgagatttcttgagattgtttttattttaaaagtta 5441628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 118 - 166
Target Start/End: Original strand, 27768230 - 27768280
Alignment:
Q  118 tcttttatgaaaagatga--tttcttgagattgtttttattttaaaagtta 166  Q
    ||||| ||||||||||||  |||||||||||||||||||||||||||||||    
T  27768230 tctttcatgaaaagatgagatttcttgagattgtttttattttaaaagtta 27768280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 118 - 166
Target Start/End: Original strand, 54341318 - 54341368
Alignment:
Q  118 tcttttatgaaaagatga--tttcttgagattgtttttattttaaaagtta 166  Q
    ||||| ||||||||||||  |||||||||||||||||||||||||||||||    
T  54341318 tctttcatgaaaagatgagatttcttgagattgtttttattttaaaagtta 54341368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 19 - 118
Target Start/End: Original strand, 7007374 - 7007473
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| ||| |||||||| ||||||||| || ||||||||||||||| | || || | ||       |||| ||||||||||||||||||||||||    
T  7007374 caatcaagattctctgtcatttaaaaaaagtcatgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatt 7007473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 20 - 66
Target Start/End: Original strand, 29855682 - 29855728
Alignment:
Q  20 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatca 66  Q
    |||||||||| ||||||||||||||||| | ||||||||||||||||    
T  29855682 aatcaagactgtttgtcattttaaaaaaattttgaggtattcaatca 29855728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 19 - 118
Target Start/End: Complemental strand, 32951042 - 32950943
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| | |||||||||| ||||||||| || ||||||||||||||| | || || | ||       |||| ||||||||||||||||||||||||    
T  32951042 caatcaagattatttgtcatttaaaaaaagtcatgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatt 32950943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 19 - 118
Target Start/End: Complemental strand, 34228789 - 34228690
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| |||||||||||| ||||||||| || ||||||||||||| ||| || || | ||       |||| |||||||||||||||||| |||||    
T  34228789 caatcaagattctttgtcatttaaaaaaagtcatgtggtattcaatcaaaattcttaatcacttaaaaaaagtctagtggtattcaaaatcattgaaatt 34228690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 19 - 69
Target Start/End: Complemental strand, 37046658 - 37046608
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 69  Q
    ||||||||| |||||||||||| |||||||| ||| |||||||||||||||    
T  37046658 caatcaagattctttgtcatttaaaaaaagttttgtggtattcaatcaaga 37046608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 19 - 69
Target Start/End: Original strand, 37915785 - 37915835
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 69  Q
    ||||||||||| ||||||| || |||||||||||| |||||||||||||||    
T  37915785 caatcaagactttttgtcacttaaaaaaagtcttgtggtattcaatcaaga 37915835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 19 - 69
Target Start/End: Complemental strand, 39479563 - 39479513
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 69  Q
    ||||||||| || ||||||||| |||||||||||| |||||||||||||||    
T  39479563 caatcaagattccttgtcatttaaaaaaagtcttgtggtattcaatcaaga 39479513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 41881331 - 41881279
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    |||||||||||||||   ||||||||||||||||| | |||||||||||||||    
T  41881331 caatcaagactctttccaattttaaaaaagtcttgtgttattcaatcaagatt 41881279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 134 - 166
Target Start/End: Original strand, 48261319 - 48261351
Alignment:
Q  134 gatttcttgagattgtttttattttaaaagtta 166  Q
    |||||||||||||||||||||||||||||||||    
T  48261319 gatttcttgagattgtttttattttaaaagtta 48261351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 118
Target Start/End: Original strand, 5799977 - 5800077
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcatta-tttnnnnnnngtcttgtggtattcaaaatcattcaaat 117  Q
    |||||||||||||||||||||||||||||   |||| |||||  ||||| | ||||||| | ||        ||||||||||||||||||||||||||||    
T  5799977 caatcaagactctttgtcattttaaaaaaaatttgatgtatttcatcaaaacttttcatcacttaaaaaaaagtcttgtggtattcaaaatcattcaaat 5800076  T
Q  118 t 118  Q
    |    
T  5800077 t 5800077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 71
Target Start/End: Original strand, 20021303 - 20021354
Alignment:
Q  20 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    |||||||||||||||  |||| |||||||| ||| |||||||||||||||||    
T  20021303 aatcaagactctttgcaatttaaaaaaagttttgtggtattcaatcaagatt 20021354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 118 - 166
Target Start/End: Original strand, 23987378 - 23987428
Alignment:
Q  118 tcttttatgaaaagatga--tttcttgagattgtttttattttaaaagtta 166  Q
    ||||| ||||||||||||  |||||||||||||||||| ||||||||||||    
T  23987378 tctttcatgaaaagatgagatttcttgagattgtttttcttttaaaagtta 23987428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 63
Target Start/End: Complemental strand, 31314933 - 31314890
Alignment:
Q  20 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaa 63  Q
    |||||||| |||||||||||| |||||||||||| |||||||||    
T  31314933 aatcaagattctttgtcatttaaaaaaagtcttgtggtattcaa 31314890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 118 - 162
Target Start/End: Complemental strand, 37828434 - 37828388
Alignment:
Q  118 tcttttatgaaaagatga--tttcttgagattgtttttattttaaaa 162  Q
    ||||| ||||||||||||  |||||||||||||||||||||||||||    
T  37828434 tctttcatgaaaagatgagatttcttgagattgtttttattttaaaa 37828388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 74
Target Start/End: Original strand, 37915743 - 37915798
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagattttt 74  Q
    ||||||||||| ||||| | || |||||||||||| ||||||||||||||| ||||    
T  37915743 caatcaagactttttgtaacttaaaaaaagtcttgtggtattcaatcaagactttt 37915798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 31 - 74
Target Start/End: Original strand, 53275851 - 53275894
Alignment:
Q  31 tttgtcattttaaaaaagtcttgaggtattcaatcaagattttt 74  Q
    |||||||||| ||||||||||||  |||||||||||||||||||    
T  53275851 tttgtcatttaaaaaaagtcttgtagtattcaatcaagattttt 53275894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 118 - 166
Target Start/End: Complemental strand, 54853500 - 54853450
Alignment:
Q  118 tcttttatgaaaagatga--tttcttgagattgtttttattttaaaagtta 166  Q
    ||||| ||||||||||||  |||||||||||||||||| ||||||||||||    
T  54853500 tctttcatgaaaagatgagatttcttgagattgtttttcttttaaaagtta 54853450  T

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Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 69
Target Start/End: Original strand, 5441362 - 5441412
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 69  Q
    ||||||||||| ||||  |||| |||||||||||| |||||||||||||||    
T  5441362 caatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaaga 5441412  T

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Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 77
Target Start/End: Original strand, 11090349 - 11090407
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcat 77  Q
    ||||||||| |||||| || || |||||||| ||| ||||||||||||||| |||||||    
T  11090349 caatcaagaatctttgccacttaaaaaaagttttgtggtattcaatcaagacttttcat 11090407  T

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Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 69
Target Start/End: Complemental strand, 30967547 - 30967497
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 69  Q
    ||||||||||| ||||  |||| |||||||||||| |||||||||||||||    
T  30967547 caatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaaga 30967497  T

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Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 37 - 74
Target Start/End: Complemental strand, 8584044 - 8584007
Alignment:
Q  37 attttaaaaaagtcttgaggtattcaatcaagattttt 74  Q
    |||||| |||||||||| ||||||||||||||||||||    
T  8584044 attttataaaagtcttgtggtattcaatcaagattttt 8584007  T

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Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 22 - 75
Target Start/End: Complemental strand, 41581991 - 41581938
Alignment:
Q  22 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttc 75  Q
    |||||||  ||||||||||||||||||||||| |||||||| | |||| |||||    
T  41581991 tcaagacattttgtcattttaaaaaagtcttgtggtattcagttaagaattttc 41581938  T

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Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 124 - 166
Target Start/End: Original strand, 51321101 - 51321145
Alignment:
Q  124 atgaaaagatga--tttcttgagattgtttttattttaaaagtta 166  Q
    ||||||||||||  |||||||||||||||||| ||||||||||||    
T  51321101 atgaaaagatgagatttcttgagattgtttttcttttaaaagtta 51321145  T

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Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 1044768 - 1044819
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    |||||||||||||||  || ||||||||||||||| | |||||||||||||||    
T  1044768 caatcaagactctttc-caatttaaaaaagtcttgtgttattcaatcaagatt 1044819  T

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Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 19741156 - 19741104
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    |||||||||||||||   |||| |||||||||||| | |||||||||||||||    
T  19741156 caatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagatt 19741104  T

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Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 22201973 - 22202025
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    |||||||||||||||   |||| |||||||||||| | |||||||||||||||    
T  22201973 caatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagatt 22202025  T

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Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 24131220 - 24131168
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    |||||||||||||||   |||| |||||||||||| | |||||||||||||||    
T  24131220 caatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagatt 24131168  T

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Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 25331089 - 25331141
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    |||||||||||||||   |||| |||||||||||| | |||||||||||||||    
T  25331089 caatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagatt 25331141  T

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Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 25504887 - 25504835
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    |||||||||||||||   |||| |||||||||||| | |||||||||||||||    
T  25504887 caatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagatt 25504835  T

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Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 28541656 - 28541708
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    |||||||||||||||   |||| |||||||||||| | |||||||||||||||    
T  28541656 caatcaagactcttttcaatttaaaaaaagtcttgtgttattcaatcaagatt 28541708  T

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Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 166
Target Start/End: Complemental strand, 30967323 - 30967291
Alignment:
Q  134 gatttcttgagattgtttttattttaaaagtta 166  Q
    |||||||||||||||||||| ||||||||||||    
T  30967323 gatttcttgagattgttttttttttaaaagtta 30967291  T

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Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 32951084 - 32951032
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    |||||||||||||||   |||| |||||||||||| | |||||||||||||||    
T  32951084 caatcaagactcttttcaatttaaaaaaagtcttgtgttattcaatcaagatt 32951032  T

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Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 37046700 - 37046648
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    |||||||||||||||   |||| |||||||||||| | |||||||||||||||    
T  37046700 caatcaagactcttttcaatttaaaaaaagtcttgtgttattcaatcaagatt 37046648  T

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Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 39479605 - 39479553
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    |||||||||||||||   |||| |||||||||||| | |||||||||||||||    
T  39479605 caatcaagactcttttcaatttaaaaaaagtcttgtgttattcaatcaagatt 39479553  T

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Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 74
Target Start/End: Original strand, 40143822 - 40143858
Alignment:
Q  38 ttttaaaaaagtcttgaggtattcaatcaagattttt 74  Q
    ||||||||||||||| |||||||||||||||| ||||    
T  40143822 ttttaaaaaagtctttaggtattcaatcaagactttt 40143858  T

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Target: chr4; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 69
Target Start/End: Original strand, 41320788 - 41320828
Alignment:
Q  29 tctttgtcattttaaaaaagtcttgaggtattcaatcaaga 69  Q
    ||||| |||||| |||||||||||| |||||||||||||||    
T  41320788 tctttatcatttaaaaaaagtcttgtggtattcaatcaaga 41320828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 74
Target Start/End: Original strand, 44929923 - 44929959
Alignment:
Q  38 ttttaaaaaagtcttgaggtattcaatcaagattttt 74  Q
    ||||| |||||||||| ||||||||||||||||||||    
T  44929923 ttttataaaagtcttgtggtattcaatcaagattttt 44929959  T

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Target: chr4; HSP #76
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 90 - 118
Target Start/End: Original strand, 48261198 - 48261226
Alignment:
Q  90 gtcttgtggtattcaaaatcattcaaatt 118  Q
    |||||||||||||||||||||||||||||    
T  48261198 gtcttgtggtattcaaaatcattcaaatt 48261226  T

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Target: chr4; HSP #77
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 166
Target Start/End: Complemental strand, 49501533 - 49501501
Alignment:
Q  134 gatttcttgagattgtttttattttaaaagtta 166  Q
    |||||||||||||||||||| ||||||||||||    
T  49501533 gatttcttgagattgtttttcttttaaaagtta 49501501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 166
Target Start/End: Complemental strand, 49507598 - 49507566
Alignment:
Q  134 gatttcttgagattgtttttattttaaaagtta 166  Q
    |||||||||||||||||||| ||||||||||||    
T  49507598 gatttcttgagattgtttttcttttaaaagtta 49507566  T

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Target: chr4; HSP #79
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 74
Target Start/End: Original strand, 54509760 - 54509796
Alignment:
Q  38 ttttaaaaaagtcttgaggtattcaatcaagattttt 74  Q
    ||||||||||||||| |||||||||||||||| ||||    
T  54509760 ttttaaaaaagtctttaggtattcaatcaagactttt 54509796  T

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Target: chr3 (Bit Score: 71; Significance: 3e-32; HSPs: 91)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 19 - 118
Target Start/End: Complemental strand, 36674336 - 36674237
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||       |||||||||||||||||||||||||||||    
T  36674336 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatt 36674237  T

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Target: chr3; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 19 - 118
Target Start/End: Original strand, 10660535 - 10660634
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||       || ||||||||||||||||||||||||||    
T  10660535 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtattgtggtattcaaaatcattcaaatt 10660634  T

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Target: chr3; HSP #3
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 20 - 119
Target Start/End: Original strand, 20832993 - 20833092
Alignment:
Q  20 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaattc 119  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||       ||||||||||||||||||||||||||||||    
T  20832993 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagaattttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaattc 20833092  T

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Target: chr3; HSP #4
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 19 - 118
Target Start/End: Complemental strand, 23753592 - 23753493
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| ||||       |||||||||||||||||||||||||||||    
T  23753592 caatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatt 23753493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 19 - 118
Target Start/End: Complemental strand, 34484236 - 34484137
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||       || ||||||||||||||||||||||||||    
T  34484236 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagttttgtggtattcaaaatcattcaaatt 34484137  T

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Target: chr3; HSP #6
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 19 - 118
Target Start/End: Complemental strand, 44906719 - 44906620
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||       |||||||||||||||||||||||||||||    
T  44906719 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatt 44906620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 19 - 118
Target Start/End: Complemental strand, 52618171 - 52618072
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||       |||||||||||||||||||||||||||||    
T  52618171 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatt 52618072  T

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Target: chr3; HSP #8
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 19 - 118
Target Start/End: Original strand, 52810378 - 52810477
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||| ||||       |||||||||||||||||||||||||||||    
T  52810378 caatcaagactctttgtcattttaaaaaagttttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatt 52810477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 19 - 118
Target Start/End: Complemental strand, 10728847 - 10728748
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||       ||||||||||||| |||||||||||||||    
T  10728847 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttacaaaaagtcttgtggtatttaaaatcattcaaatt 10728748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 19 - 118
Target Start/End: Original strand, 11431526 - 11431625
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||       ||||||||||||||||||||||| |||||    
T  11431526 caataaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcatttaaatt 11431625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 19 - 118
Target Start/End: Original strand, 26107261 - 26107360
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| | ||       |||||||||||||||||||||||||||||    
T  26107261 caatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcaattaaaaaaagtcttgtggtattcaaaatcattcaaatt 26107360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 19 - 118
Target Start/End: Original strand, 37454861 - 37454960
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| ||||||||||||||||||||||||||| ||||||||||||| ||||||| ||||       |||||||||||||||||||||||||||||    
T  37454861 caatcaagattctttgtcattttaaaaaagtcttgagatattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatt 37454960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 19 - 118
Target Start/End: Original strand, 39038040 - 39038139
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||       |||||||||||| ||||||||||||||||    
T  39038040 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcactttaaaaaagtcttgtggtatccaaaatcattcaaatt 39038139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 19 - 118
Target Start/End: Original strand, 48379157 - 48379256
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||| | ||       |||||||||||||||||||||||||||||    
T  48379157 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatctagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatt 48379256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 22 - 118
Target Start/End: Original strand, 40897147 - 40897243
Alignment:
Q  22 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||       ||||| |||||||||||||||||||||||    
T  40897147 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttatggtattcaaaatcattcaaatt 40897243  T

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Target: chr3; HSP #16
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 19 - 118
Target Start/End: Complemental strand, 6035259 - 6035160
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| | ||       |||| ||| ||||||||||||||||||||    
T  6035259 caatcaagagtctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcatcacttaaaaaaagtctcgtgatattcaaaatcattcaaatt 6035160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 19 - 118
Target Start/End: Complemental strand, 31646490 - 31646391
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||| |||||||||||||||||| |||||||||||||| ||||||| ||||        ||||||||||||||||||||||||||||    
T  31646490 caatcaagactctttgttattttaaaaaagtcttgacgtattcaatcaagacttttcatcatttaaaaaaaatcttgtggtattcaaaatcattcaaatt 31646391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 19 - 118
Target Start/End: Complemental strand, 50762256 - 50762157
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||| || ||||||| ||||       |||||||||||||||||||||||| ||||    
T  50762256 caatcaagactctttgtcattttaaaaaagtcttgagatattcaatcatgacttttcataatttaaaaaaagtcttgtggtattcaaaatcattctaatt 50762157  T

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Target: chr3; HSP #19
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 21 - 118
Target Start/End: Original strand, 32580179 - 32580275
Alignment:
Q  21 atcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    |||||| ||||||||||||||||||||||||||||||||||||| |||| ||||||| ||||       |||||||||||||||||||||||||||||    
T  32580179 atcaaggctctttgtcattttaaaaaagtcttgaggtattcaat-aagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatt 32580275  T

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Target: chr3; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 19 - 118
Target Start/End: Complemental strand, 51737933 - 51737833
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaa-gtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaat 117  Q
    ||||||||||||||| ||||||||||||| |||||||||||||||||||||| ||||||| | ||       ||||||||||||||||||||||||||||    
T  51737933 caatcaagactctttatcattttaaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaat 51737834  T
Q  118 t 118  Q
    |    
T  51737833 t 51737833  T

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Target: chr3; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 19 - 118
Target Start/End: Original strand, 12103629 - 12103728
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    |||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||| | ||       ||||  |||||||||||||||||||||||    
T  12103629 caattaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcatcacttaaaaaaagtctcatggtattcaaaatcattcaaatt 12103728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 19 - 118
Target Start/End: Original strand, 17946288 - 17946387
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| | ||       |||| ||| ||||||||||||||||||||    
T  17946288 caatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtctcgtgatattcaaaatcattcaaatt 17946387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 27 - 118
Target Start/End: Original strand, 44276397 - 44276488
Alignment:
Q  27 actctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| | ||       ||||  |||||||||||||||||||||||    
T  44276397 actctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcatcacttaaaaaaagtctcatggtattcaaaatcattcaaatt 44276488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 19 - 77
Target Start/End: Original strand, 54628843 - 54628901
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcat 77  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  54628843 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcat 54628901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 19 - 118
Target Start/End: Original strand, 6975749 - 6975845
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||| ||||||||| ||||||||||||||||||||||| ||||||| ||||       |||||||||||||||||||||||||||||    
T  6975749 caatcaagactctttgttattttaaaa-agtcttgaggtattcaatcaagacttttcatcattt--aaaaagtcttgtggtattcaaaatcattcaaatt 6975845  T

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Target: chr3; HSP #26
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 19 - 118
Target Start/End: Complemental strand, 50903449 - 50903347
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattattt---nnnnnnngtcttgtggtattcaaaatcattcaa 115  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||| |||| || ||||          ||||||||||||||||||||||||||    
T  50903449 caatcaagactctttgtcattttaaaaaagtcttaaggtattcaatcaagactttttatcatttaaaaaaaaaagtcttgtggtattcaaaatcattcaa 50903350  T
Q  116 att 118  Q
    |||    
T  50903349 att 50903347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 43 - 118
Target Start/End: Complemental strand, 539586 - 539511
Alignment:
Q  43 aaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||||||| ||||       |||||||||||||||||||||||||||||    
T  539586 aaaaagtcttgaggtattcaatcaagatttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatt 539511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 19 - 77
Target Start/End: Original strand, 18749570 - 18749628
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcat 77  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||    
T  18749570 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaaacttttcat 18749628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 24 - 77
Target Start/End: Complemental strand, 15493061 - 15493008
Alignment:
Q  24 aagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcat 77  Q
    |||||||||||||||||||||||||||||||||||||||||||| | |||||||    
T  15493061 aagactctttgtcattttaaaaaagtcttgaggtattcaatcaaaacttttcat 15493008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 19 - 118
Target Start/End: Complemental strand, 996292 - 996193
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| ||||| |||||| |||||||||||| ||||||||||||||||| || || | ||       |||| ||||||||||||||||||||||||    
T  996292 caatcaagattctttatcatttcaaaaaagtcttgtggtattcaatcaagattcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatt 996193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 19 - 118
Target Start/End: Original strand, 19253827 - 19253926
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| |||||||||||| |||||||||||| ||||||||||||||| | || || | ||       |||| ||||||||||||||||||||||||    
T  19253827 caatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatt 19253926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 19 - 118
Target Start/End: Original strand, 20498209 - 20498308
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| |||||||||||| |||||||||||| ||||||||||||||| | || || | ||       |||| ||||||||||||||||||||||||    
T  20498209 caatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatt 20498308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 19 - 118
Target Start/End: Complemental strand, 37820683 - 37820584
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| |||||||||||| |||||| ||||| ||||||||||||||||| || || | ||       |||| ||||||||||||||||||||||||    
T  37820683 caatcaagattctttgtcatttaaaaaaattcttgtggtattcaatcaagattcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatt 37820584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 19 - 118
Target Start/End: Original strand, 29030006 - 29030104
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    |||| ||||||||||||||||| |||||||||||| ||||||||||||||| | || || | ||       |||||||||||||||||||||||||||||    
T  29030006 caattaagactctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcactt-aaaaaagtcttgtggtattcaaaatcattcaaatt 29030104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 19 - 74
Target Start/End: Original strand, 25418366 - 25418421
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagattttt 74  Q
    ||||||||| |||||||||||| |||||||||||| ||||||||||||||| ||||    
T  25418366 caatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactttt 25418421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 19 - 69
Target Start/End: Complemental strand, 3999851 - 3999801
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 69  Q
    ||||||||| |||||||||||| |||||||||||| |||||||||||||||    
T  3999851 caatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaaga 3999801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 19 - 118
Target Start/End: Original strand, 6589564 - 6589663
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||| | || ||||||||| |||||||||||| ||||||||||||||| | || || ||||       |||| ||||||||||||||||||||||||    
T  6589564 caatcaatattccttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcatttaaaaaaagtctagtggtattcaaaatcattcaaatt 6589663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 39 - 118
Target Start/End: Original strand, 18749632 - 18749711
Alignment:
Q  39 tttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    |||||||||||||||||||||||||| || | ||||||| | ||       |||||||||||||||||||||||||||||    
T  18749632 tttaaaaaagtcttgaggtattcaataaaaacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatt 18749711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 19 - 69
Target Start/End: Complemental strand, 33996747 - 33996697
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 69  Q
    ||||||||| |||||||||||| |||||||||||| |||||||||||||||    
T  33996747 caatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaaga 33996697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 19 - 69
Target Start/End: Original strand, 35337735 - 35337785
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 69  Q
    ||||||||| || |||||||||||||||||||||| |||||||||||||||    
T  35337735 caatcaagattccttgtcattttaaaaaagtcttgtggtattcaatcaaga 35337785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 19 - 118
Target Start/End: Original strand, 40246844 - 40246943
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| |||||||||||| |||||||| ||| ||||||||||||||| | || || | ||       |||| ||||||||||||||||||||||||    
T  40246844 caatcaagattctttgtcatttaaaaaaagttttgtggtattcaatcaagactattaatcagttaaaaaaagtctagtggtattcaaaatcattcaaatt 40246943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 19 - 69
Target Start/End: Complemental strand, 53929334 - 53929284
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 69  Q
    ||||||||| |||||||||||| |||||||||||| |||||||||||||||    
T  53929334 caatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaaga 53929284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 60
Target Start/End: Complemental strand, 27240449 - 27240408
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtatt 60  Q
    ||||||||||||||||||||||||||||||| ||||||||||    
T  27240449 caatcaagactctttgtcattttaaaaaagttttgaggtatt 27240408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 118 - 166
Target Start/End: Original strand, 11431700 - 11431750
Alignment:
Q  118 tcttttatgaaaagatga--tttcttgagattgtttttattttaaaagtta 166  Q
    ||||| ||||||||||||  |||||||||||||||||||||||||||||||    
T  11431700 tctttcatgaaaagatgagatttcttgagattgtttttattttaaaagtta 11431750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 118 - 166
Target Start/End: Complemental strand, 36674162 - 36674112
Alignment:
Q  118 tcttttatgaaaagatga--tttcttgagattgtttttattttaaaagtta 166  Q
    ||||| ||||||||||||  |||||||||||||||||||||||||||||||    
T  36674162 tctttcatgaaaagatgagatttcttgagattgtttttattttaaaagtta 36674112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 74
Target Start/End: Original strand, 52114532 - 52114583
Alignment:
Q  23 caagactctttgtcattttaaaaaagtcttgaggtattcaatcaagattttt 74  Q
    ||||| |||||||||||| |||||||||||| ||||||||||||||| ||||    
T  52114532 caagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactttt 52114583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 19 - 69
Target Start/End: Complemental strand, 6131377 - 6131327
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 69  Q
    |||||||||||| ||||||||| |||||||| ||| |||||||||||||||    
T  6131377 caatcaagactcattgtcatttaaaaaaagttttgtggtattcaatcaaga 6131327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 19 - 118
Target Start/End: Complemental strand, 10139352 - 10139253
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| || || |||||| |||||||||||| ||||||||||||||| | || || | ||       |||| ||||||||||||||||||||||||    
T  10139352 caatcaagattccttatcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatt 10139253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 19 - 69
Target Start/End: Complemental strand, 33808005 - 33807955
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 69  Q
    |||| |||| |||||||||||| |||||||||||| |||||||||||||||    
T  33808005 caattaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaaga 33807955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 19 - 69
Target Start/End: Complemental strand, 51699685 - 51699635
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 69  Q
    ||||||||| |||||||||||| |||||| ||||| |||||||||||||||    
T  51699685 caatcaagattctttgtcatttaaaaaaaatcttgtggtattcaatcaaga 51699635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 124 - 166
Target Start/End: Original strand, 10660691 - 10660735
Alignment:
Q  124 atgaaaagatga--tttcttgagattgtttttattttaaaagtta 166  Q
    ||||||||||||  |||||||||||||||||||||||||||||||    
T  10660691 atgaaaagatgagatttcttgagattgtttttattttaaaagtta 10660735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 3206444 - 3206392
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    |||||||||||||||   |||| |||||||||||| |||||||||||||||||    
T  3206444 caatcaagactcttttcaatttaaaaaaagtcttgtggtattcaatcaagatt 3206392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 23753634 - 23753582
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    ||||||||||| ||||  |||| |||||||||||| |||||||||||||||||    
T  23753634 caatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaagatt 23753582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 63
Target Start/End: Original strand, 27899386 - 27899430
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaa 63  Q
    |||||||||||||||||||||| |||||||||| | |||||||||    
T  27899386 caatcaagactctttgtcatttaaaaaaagtctggtggtattcaa 27899430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 118 - 166
Target Start/End: Complemental strand, 10728683 - 10728633
Alignment:
Q  118 tcttttatgaaaagatga--tttcttgagattgtttttattttaaaagtta 166  Q
    ||||| ||||||||||||  |||||||||||||||||| ||||||||||||    
T  10728683 tctttcatgaaaagatgagatttcttgagattgtttttcttttaaaagtta 10728633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 134 - 165
Target Start/End: Complemental strand, 15492881 - 15492850
Alignment:
Q  134 gatttcttgagattgtttttattttaaaagtt 165  Q
    ||||||||||||||||||||||||||||||||    
T  15492881 gatttcttgagattgtttttattttaaaagtt 15492850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 118 - 166
Target Start/End: Original strand, 17946462 - 17946512
Alignment:
Q  118 tcttttatgaaaagatga--tttcttgagattgtttttattttaaaagtta 166  Q
    ||||| ||||||||||||  |||||||||||||||||| ||||||||||||    
T  17946462 tctttcatgaaaagatgagatttcttgagattgtttttcttttaaaagtta 17946512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 118 - 166
Target Start/End: Original strand, 18749786 - 18749836
Alignment:
Q  118 tcttttatgaaaagatga--tttcttgagattgtttttattttaaaagtta 166  Q
    ||||| ||||||||||||  |||||||||||||||||| ||||||||||||    
T  18749786 tctttcatgaaaagatgagatttcttgagattgtttttcttttaaaagtta 18749836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 118 - 162
Target Start/End: Original strand, 32580350 - 32580396
Alignment:
Q  118 tcttttatgaaaagatga--tttcttgagattgtttttattttaaaa 162  Q
    ||||| ||||||||||||  |||||||||||||||||||||||||||    
T  32580350 tctttcatgaaaagatgagatttcttgagattgtttttattttaaaa 32580396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 118 - 166
Target Start/End: Complemental strand, 34484062 - 34484012
Alignment:
Q  118 tcttttatgaaaagatga--tttcttgagattgtttttattttaaaagtta 166  Q
    ||||| ||||||||||||  |||||||||||||||||| ||||||||||||    
T  34484062 tctttcatgaaaagatgagatttcttgagattgtttttgttttaaaagtta 34484012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 118 - 166
Target Start/End: Complemental strand, 44906545 - 44906495
Alignment:
Q  118 tcttttatgaaaagatga--tttcttgagattgtttttattttaaaagtta 166  Q
    ||||| ||||||||||||  |||||||||||||||||| ||||||||||||    
T  44906545 tctttcatgaaaagatgagatttcttgagattgtttttcttttaaaagtta 44906495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 118 - 166
Target Start/End: Complemental strand, 50762092 - 50762042
Alignment:
Q  118 tcttttatgaaaagatga--tttcttgagattgtttttattttaaaagtta 166  Q
    ||||| ||||||||||||  |||||||||||||||||| ||||||||||||    
T  50762092 tctttcatgaaaagatgagatttcttgagattgtttttcttttaaaagtta 50762042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 71
Target Start/End: Complemental strand, 3999895 - 3999841
Alignment:
Q  17 cacaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    ||||||||||||| ||| | |||| |||||||||||| | |||||||||||||||    
T  3999895 cacaatcaagactttttctaatttaaaaaaagtcttgtgttattcaatcaagatt 3999841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 69
Target Start/End: Original strand, 10660493 - 10660543
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 69  Q
    ||||||||||| ||||  |||| |||||||||||| |||||||||||||||    
T  10660493 caatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaaga 10660543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 69
Target Start/End: Complemental strand, 36674378 - 36674328
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 69  Q
    ||||||||||| ||||  |||| |||||||||||| |||||||||||||||    
T  36674378 caatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaaga 36674328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 69
Target Start/End: Complemental strand, 44762243 - 44762193
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 69  Q
    ||||||||| |||||||||||| ||||||||| ||  ||||||||||||||    
T  44762243 caatcaagattctttgtcatttaaaaaaagtcatgtagtattcaatcaaga 44762193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 69
Target Start/End: Original strand, 6975712 - 6975757
Alignment:
Q  24 aagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 69  Q
    |||||||||||| | || |||||||||||| |||||||||||||||    
T  6975712 aagactctttgtaacttaaaaaaagtcttgtggtattcaatcaaga 6975757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 37 - 74
Target Start/End: Complemental strand, 19552187 - 19552150
Alignment:
Q  37 attttaaaaaagtcttgaggtattcaatcaagattttt 74  Q
    |||||| |||||||||| ||||||||||||||||||||    
T  19552187 attttataaaagtcttgtggtattcaatcaagattttt 19552150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 124 - 166
Target Start/End: Original strand, 37455031 - 37455075
Alignment:
Q  124 atgaaaagatga--tttcttgagattgtttttattttaaaagtta 166  Q
    ||||||||||||  |||||||||||||||||| ||||||||||||    
T  37455031 atgaaaagatgagatttcttgagattgtttttcttttaaaagtta 37455075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 44276347 - 44276392
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaat 64  Q
    |||| |||||||||||| |||| |||||||||||| ||||||||||    
T  44276347 caattaagactctttgtaatttaaaaaaagtcttgtggtattcaat 44276392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 1440200 - 1440149
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    ||||||||||| ||| ||| ||||||||||||||| | |||||||||||||||    
T  1440200 caatcaagactattt-tcaatttaaaaaagtcttgtgttattcaatcaagatt 1440149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 10139394 - 10139342
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    |||||||||||||||   |||| |||||||||||| | |||||||||||||||    
T  10139394 caatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagatt 10139342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 19253785 - 19253837
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    |||||||||||||||   |||| |||||||||||| | |||||||||||||||    
T  19253785 caatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagatt 19253837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 90 - 118
Target Start/End: Complemental strand, 23535946 - 23535918
Alignment:
Q  90 gtcttgtggtattcaaaatcattcaaatt 118  Q
    |||||||||||||||||||||||||||||    
T  23535946 gtcttgtggtattcaaaatcattcaaatt 23535918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 166
Target Start/End: Complemental strand, 23753421 - 23753389
Alignment:
Q  134 gatttcttgagattgtttttattttaaaagtta 166  Q
    |||||||||||||||||||| ||||||||||||    
T  23753421 gatttcttgagattgtttttgttttaaaagtta 23753389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 166
Target Start/End: Original strand, 26107453 - 26107485
Alignment:
Q  134 gatttcttgagattgtttttattttaaaagtta 166  Q
    |||||||||||||||||||| ||||||||||||    
T  26107453 gatttcttgagattgtttttcttttaaaagtta 26107485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 74
Target Start/End: Original strand, 26555860 - 26555896
Alignment:
Q  38 ttttaaaaaagtcttgaggtattcaatcaagattttt 74  Q
    ||||| |||||||||| ||||||||||||||||||||    
T  26555860 ttttataaaagtcttgtggtattcaatcaagattttt 26555896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 74
Target Start/End: Original strand, 27593198 - 27593234
Alignment:
Q  38 ttttaaaaaagtcttgaggtattcaatcaagattttt 74  Q
    ||||||||||||||| |||||||||||||||| ||||    
T  27593198 ttttaaaaaagtctttaggtattcaatcaagactttt 27593234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 74
Target Start/End: Original strand, 30588885 - 30588921
Alignment:
Q  38 ttttaaaaaagtcttgaggtattcaatcaagattttt 74  Q
    ||||| |||||||||| ||||||||||||||||||||    
T  30588885 ttttataaaagtcttgtggtattcaatcaagattttt 30588921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 35337693 - 35337745
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    |||||||||||||||   |||| |||||||||||| | |||||||||||||||    
T  35337693 caatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagatt 35337745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 74
Target Start/End: Complemental strand, 36055045 - 36055009
Alignment:
Q  38 ttttaaaaaagtcttgaggtattcaatcaagattttt 74  Q
    ||||| |||||||||| ||||||||||||||||||||    
T  36055045 ttttataaaagtcttgtggtattcaatcaagattttt 36055009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 74
Target Start/End: Original strand, 36786017 - 36786053
Alignment:
Q  38 ttttaaaaaagtcttgaggtattcaatcaagattttt 74  Q
    ||||||||||||||| |||||||||||||||| ||||    
T  36786017 ttttaaaaaagtctttaggtattcaatcaagactttt 36786053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 37820725 - 37820673
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    |||||||||||||||   |||| |||||||||||| | |||||||||||||||    
T  37820725 caatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagatt 37820673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 74
Target Start/End: Complemental strand, 38629838 - 38629802
Alignment:
Q  38 ttttaaaaaagtcttgaggtattcaatcaagattttt 74  Q
    ||||| |||||||||| ||||||||||||||||||||    
T  38629838 ttttataaaagtcttgtggtattcaatcaagattttt 38629802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 74
Target Start/End: Original strand, 38682472 - 38682508
Alignment:
Q  38 ttttaaaaaagtcttgaggtattcaatcaagattttt 74  Q
    |||||||||| ||||| ||||||||||||||||||||    
T  38682472 ttttaaaaaaatcttgtggtattcaatcaagattttt 38682508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 44762285 - 44762233
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    |||||||||||||||   |||| |||||||||||| | |||||||||||||||    
T  44762285 caatcaagactcttttcaatttaaaaaaagtcttgtgttattcaatcaagatt 44762233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 74
Target Start/End: Complemental strand, 50900485 - 50900449
Alignment:
Q  38 ttttaaaaaagtcttgaggtattcaatcaagattttt 74  Q
    ||||| |||||||||| ||||||||||||||||||||    
T  50900485 ttttataaaagtcttgtggtattcaatcaagattttt 50900449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 74
Target Start/End: Complemental strand, 52024233 - 52024201
Alignment:
Q  42 aaaaaagtcttgaggtattcaatcaagattttt 74  Q
    |||||||||||| ||||||||||||||||||||    
T  52024233 aaaaaagtcttgtggtattcaatcaagattttt 52024201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 166
Target Start/End: Complemental strand, 52617985 - 52617953
Alignment:
Q  134 gatttcttgagattgtttttattttaaaagtta 166  Q
    |||||||||||||||||||| ||||||||||||    
T  52617985 gatttcttgagattgtttttcttttaaaagtta 52617953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 163
Target Start/End: Original strand, 52810552 - 52810599
Alignment:
Q  118 tcttttatgaaaagatga--tttcttgagattgtttttattttaaaag 163  Q
    ||||| ||||||||||||  |||||||||||||||||| |||||||||    
T  52810552 tctttcatgaaaagatgagatttcttgagattgtttttcttttaaaag 52810599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 74
Target Start/End: Complemental strand, 53184111 - 53184075
Alignment:
Q  38 ttttaaaaaagtcttgaggtattcaatcaagattttt 74  Q
    |||||||||||||| | ||||||||||||||||||||    
T  53184111 ttttaaaaaagtctcgtggtattcaatcaagattttt 53184075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 71; Significance: 3e-32; HSPs: 56)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 19 - 118
Target Start/End: Original strand, 7026606 - 7026705
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||       |||||||||||||||||||||||||||||    
T  7026606 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatt 7026705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 19 - 118
Target Start/End: Original strand, 18177269 - 18177368
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||       || ||||||||||||||||||||||||||    
T  18177269 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagttttgtggtattcaaaatcattcaaatt 18177368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 19 - 118
Target Start/End: Complemental strand, 28740491 - 28740392
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||       |||||||||||||||||||||||||||||    
T  28740491 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatt 28740392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 19 - 118
Target Start/End: Original strand, 28844557 - 28844656
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||       |||||||||||||||||||||||||||||    
T  28844557 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatt 28844656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 20 - 118
Target Start/End: Complemental strand, 6224755 - 6224656
Alignment:
Q  20 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcatta-tttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||       ||||||||||||||||||| |||||||||    
T  6224755 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcatcactttaaaaaaagtcttgtggtattcaaaattattcaaatt 6224656  T

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Target: chr2; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 19 - 118
Target Start/End: Original strand, 33135625 - 33135724
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||       |||| ||||||||||||||||||||||||    
T  33135625 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtctcgtggtattcaaaatcattcaaatt 33135724  T

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Target: chr2; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 19 - 118
Target Start/End: Original strand, 25288161 - 25288260
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||| | ||        ||||||||||||||||||||||||||||    
T  25288161 caatcaagactctttgtcattttaaaaaagtcttgaggtattcattcaagacttttcatcacttaaaaaaaatcttgtggtattcaaaatcattcaaatt 25288260  T

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Target: chr2; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 19 - 118
Target Start/End: Original strand, 26788786 - 26788887
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatt--tnnnnnnngtcttgtggtattcaaaatcattcaaa 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||          |||||||||||||||||||||||||||    
T  26788786 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcattcaaaaaaaaagtcttgtggtattcaaaatcattcaaa 26788885  T
Q  117 tt 118  Q
    ||    
T  26788886 tt 26788887  T

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Target: chr2; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 19 - 118
Target Start/End: Original strand, 3574849 - 3574948
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    |||||||||||  |||||||||||||||||||||||||||||||||||||| ||||||| | ||       |||||||| ||||||||||||||||||||    
T  3574849 caatcaagactaattgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtgatattcaaaatcattcaaatt 3574948  T

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Target: chr2; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 19 - 118
Target Start/End: Original strand, 10657408 - 10657507
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    |||||||||  |||||||||||||||||||| ||||||||||||||||||| ||||||| | ||       |||||||||||||||||||||||||||||    
T  10657408 caatcaagatcctttgtcattttaaaaaagttttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatt 10657507  T

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Target: chr2; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 19 - 116
Target Start/End: Complemental strand, 215433 - 215336
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaa 116  Q
    ||||||||||||||||||| ||| ||||||||||||||||||||||||||| ||||||| | ||       |||| ||||||||||||||||||||||    
T  215433 caatcaagactctttgtcaattttaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtctcgtggtattcaaaatcattcaaa 215336  T

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Target: chr2; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 19 - 115
Target Start/End: Original strand, 3463673 - 3463770
Alignment:
Q  19 caatcaaga-ctctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaa 115  Q
    ||||||||| |||||||||||||||||||||||||||||| ||||||||||| ||||||| ||||       ||||||||||||| ||||||||||||    
T  3463673 caatcaagaactctttgtcattttaaaaaagtcttgaggtgttcaatcaagacttttcatcatttaaaaaaagtcttgtggtatttaaaatcattcaa 3463770  T

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Target: chr2; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 19 - 118
Target Start/End: Complemental strand, 13833630 - 13833531
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||| ||| ||||||||||||||||||||  ||||||||||||| ||||||| | ||       ||||| |||||||||||||||||||||||    
T  13833630 caatcaagactttttatcattttaaaaaagtcttgatatattcaatcaagacttttcatcacttaaaaaaagtcttctggtattcaaaatcattcaaatt 13833531  T

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Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 19 - 118
Target Start/End: Original strand, 16269693 - 16269792
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| |||||||||||| |||||||||||| ||||||||||||||| | || || | ||       |||| ||||||||||||||||||||||||    
T  16269693 caatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatt 16269792  T

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Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 19 - 118
Target Start/End: Complemental strand, 22551971 - 22551872
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| |||||||||||| |||||||||||| ||||||||||||||| |||| || | ||       |||| |||||||||||||| |||||||||    
T  22551971 caatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagacttttaatcacttaaaaaaagtctagtggtattcaaaattattcaaatt 22551872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 19 - 118
Target Start/End: Original strand, 24776357 - 24776456
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| |||||||||||| |||||||||||| ||||||||||||||| | || || | ||       |||| ||||||||||||||||||||||||    
T  24776357 caatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatt 24776456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 19 - 118
Target Start/End: Complemental strand, 31170832 - 31170733
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| |||||||||||| |||||||||||| ||||||||||||||| | || || | ||       |||| ||||||||||||||||||||||||    
T  31170832 caatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatt 31170733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 19 - 118
Target Start/End: Complemental strand, 305673 - 305574
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| | |||||||||| |||||||||||| ||||||||||||||| | || || | ||       |||| ||||||||||||||||||||||||    
T  305673 caatcaagattatttgtcatttgaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatt 305574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 19 - 69
Target Start/End: Complemental strand, 5093255 - 5093205
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 69  Q
    ||||||||| |||||||||||| |||||||||||| |||||||||||||||    
T  5093255 caatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaaga 5093205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 19 - 118
Target Start/End: Original strand, 12407382 - 12407481
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| |||||||||||| |||||||||||| ||||||||||| ||| | || || | ||       |||| ||||||||||||||||||||||||    
T  12407382 caatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcgagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatt 12407481  T

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Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 19 - 69
Target Start/End: Original strand, 20605154 - 20605204
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 69  Q
    ||||||||| |||||||||||| |||||||||||| |||||||||||||||    
T  20605154 caatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaaga 20605204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 19 - 69
Target Start/End: Original strand, 20605238 - 20605288
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 69  Q
    ||||||||| |||||||||||| |||||||||||| |||||||||||||||    
T  20605238 caatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaaga 20605288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 19 - 69
Target Start/End: Original strand, 43847648 - 43847698
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 69  Q
    ||||||||| |||||||||||| |||||||||||| |||||||||||||||    
T  43847648 caatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaaga 43847698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 19 - 118
Target Start/End: Original strand, 44765777 - 44765876
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| |||||||||||| |||||||||||| ||||||||||| ||| | || || | ||       |||| ||||||||||||||||||||||||    
T  44765777 caatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcgagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatt 44765876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 77
Target Start/End: Complemental strand, 10125500 - 10125440
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtc--ttgaggtattcaatcaagatttttcat 77  Q
    ||||||||||||||||||||||||||||||||  ||||| ||||||||||| | |||||||    
T  10125500 caatcaagactctttgtcattttaaaaaagtcttttgagatattcaatcaaaacttttcat 10125440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 118 - 166
Target Start/End: Original strand, 7027063 - 7027113
Alignment:
Q  118 tcttttatgaaaagatga--tttcttgagattgtttttattttaaaagtta 166  Q
    ||||| ||||||||||||  |||||||||||||||||||||||||||||||    
T  7027063 tctttcatgaaaagatgagatttcttgagattgtttttattttaaaagtta 7027113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 19 - 69
Target Start/End: Complemental strand, 14198785 - 14198735
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 69  Q
    ||||||| | |||||||||||| |||||||||||| |||||||||||||||    
T  14198785 caatcaaaattctttgtcatttaaaaaaagtcttgtggtattcaatcaaga 14198735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 19 - 118
Target Start/End: Original strand, 35317064 - 35317163
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| |||||||||||| ||||||||||||   ||||||||||||| | || || | ||       |||| ||||||||||||||||||||||||    
T  35317064 caatcaagattctttgtcatttaaaaaaagtcttgtaatattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatt 35317163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 69
Target Start/End: Complemental strand, 26601407 - 26601358
Alignment:
Q  20 aatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 69  Q
    ||||||||||||||||||||  ||||||||||||  ||||||||||||||    
T  26601407 aatcaagactctttgtcattaaaaaaaagtcttgtagtattcaatcaaga 26601358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 9120128 - 9120180
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    |||||||||||||||   ||||||||||||||||| | |||||||||||||||    
T  9120128 caatcaagactctttccaattttaaaaaagtcttgtgttattcaatcaagatt 9120180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 134 - 166
Target Start/End: Original strand, 18177461 - 18177493
Alignment:
Q  134 gatttcttgagattgtttttattttaaaagtta 166  Q
    |||||||||||||||||||||||||||||||||    
T  18177461 gatttcttgagattgtttttattttaaaagtta 18177493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 74
Target Start/End: Original strand, 24193595 - 24193631
Alignment:
Q  38 ttttaaaaaagtcttgaggtattcaatcaagattttt 74  Q
    |||||||||||||||| ||||||||||||||||||||    
T  24193595 ttttaaaaaagtcttggggtattcaatcaagattttt 24193631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 24776315 - 24776367
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    ||||||||||||||| | |||| |||||||||||| | |||||||||||||||    
T  24776315 caatcaagactctttctaatttaaaaaaagtcttgtgttattcaatcaagatt 24776367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 134 - 166
Target Start/End: Original strand, 26788977 - 26789009
Alignment:
Q  134 gatttcttgagattgtttttattttaaaagtta 166  Q
    |||||||||||||||||||||||||||||||||    
T  26788977 gatttcttgagattgtttttattttaaaagtta 26789009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 118 - 166
Target Start/End: Original strand, 25288335 - 25288385
Alignment:
Q  118 tcttttatgaaaagatga--tttcttgagattgtttttattttaaaagtta 166  Q
    ||||| ||||||||||||  |||||||||||||||||| ||||||||||||    
T  25288335 tctttcatgaaaagatgagatttcttgagattgtttttcttttaaaagtta 25288385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 118
Target Start/End: Original strand, 1789444 - 1789543
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| |||||||||||| |||||||||||  | ||||||||||| | | || || | ||       |||| ||||||||||||||||||||||||    
T  1789444 caatcaagattctttgtcatttaaaaaaagtcttatgatattcaatcaaaactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatt 1789543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 69
Target Start/End: Original strand, 7026564 - 7026614
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 69  Q
    ||||||||||| ||||  |||| |||||||||||| |||||||||||||||    
T  7026564 caatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaaga 7026614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 69
Target Start/End: Complemental strand, 10125542 - 10125492
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 69  Q
    ||||||||||||||||  |||| |||||||| ||| |||||||||||||||    
T  10125542 caatcaagactctttgcaatttaaaaaaagttttgtggtattcaatcaaga 10125492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 69
Target Start/End: Original strand, 26788744 - 26788794
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 69  Q
    ||||||||||| ||||  |||| |||||||||||| |||||||||||||||    
T  26788744 caatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaaga 26788794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 69
Target Start/End: Original strand, 32125252 - 32125302
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 69  Q
    ||||||| | |||||||||||| ||||||||| || |||||||||||||||    
T  32125252 caatcaaaattctttgtcatttaaaaaaagtcatgtggtattcaatcaaga 32125302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 166
Target Start/End: Original strand, 3463856 - 3463888
Alignment:
Q  134 gatttcttgagattgtttttattttaaaagtta 166  Q
    |||||||||||||||||||| ||||||||||||    
T  3463856 gatttcttgagattgtttttgttttaaaagtta 3463888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 5093297 - 5093245
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    |||||||||||||||   |||| |||||||||||| | |||||||||||||||    
T  5093297 caatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagatt 5093245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 74
Target Start/End: Original strand, 11534881 - 11534917
Alignment:
Q  38 ttttaaaaaagtcttgaggtattcaatcaagattttt 74  Q
    ||||||||||||||| |||||||||||||||| ||||    
T  11534881 ttttaaaaaagtctttaggtattcaatcaagactttt 11534917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 12407340 - 12407392
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    ||||||||| |||||   ||||||||||||||||| | |||||||||||||||    
T  12407340 caatcaagattcttttcaattttaaaaaagtcttgtgttattcaatcaagatt 12407392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 16269651 - 16269703
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    |||||||||||||||   |||| |||||||||||| | |||||||||||||||    
T  16269651 caatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagatt 16269703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 20605112 - 20605164
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    |||||||||||||||   |||| |||||||||||| | |||||||||||||||    
T  20605112 caatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagatt 20605164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 20605196 - 20605248
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    |||||||||||||||   |||| |||||||||||| | |||||||||||||||    
T  20605196 caatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagatt 20605248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 90 - 118
Target Start/End: Complemental strand, 21370687 - 21370659
Alignment:
Q  90 gtcttgtggtattcaaaatcattcaaatt 118  Q
    |||||||||||||||||||||||||||||    
T  21370687 gtcttgtggtattcaaaatcattcaaatt 21370659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 166
Target Start/End: Complemental strand, 28740309 - 28740277
Alignment:
Q  134 gatttcttgagattgtttttattttaaaagtta 166  Q
    |||||||||||||||||||| ||||||||||||    
T  28740309 gatttcttgagattgtttttcttttaaaagtta 28740277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 166
Target Start/End: Original strand, 28844749 - 28844781
Alignment:
Q  134 gatttcttgagattgtttttattttaaaagtta 166  Q
    |||||||||||||||||||| ||||||||||||    
T  28844749 gatttcttgagattgtttttcttttaaaagtta 28844781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 74
Target Start/End: Original strand, 29940991 - 29941027
Alignment:
Q  38 ttttaaaaaagtcttgaggtattcaatcaagattttt 74  Q
    ||||| |||||||||| ||||||||||||||||||||    
T  29940991 ttttataaaagtcttgtggtattcaatcaagattttt 29941027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 31170874 - 31170822
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    |||||||||||||||   |||| |||||||||||| | |||||||||||||||    
T  31170874 caatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagatt 31170822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 166
Target Start/End: Original strand, 33135816 - 33135848
Alignment:
Q  134 gatttcttgagattgtttttattttaaaagtta 166  Q
    |||||||||||||||||||| ||||||||||||    
T  33135816 gatttcttgagattgtttttcttttaaaagtta 33135848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 74
Target Start/End: Complemental strand, 34028971 - 34028935
Alignment:
Q  38 ttttaaaaaagtcttgaggtattcaatcaagattttt 74  Q
    ||||||||||||||| |||||||||||||||| ||||    
T  34028971 ttttaaaaaagtctttaggtattcaatcaagactttt 34028935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 166
Target Start/End: Original strand, 43078757 - 43078789
Alignment:
Q  134 gatttcttgagattgtttttattttaaaagtta 166  Q
    |||||||||||||||||||| ||||||||||||    
T  43078757 gatttcttgagattgtttttgttttaaaagtta 43078789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 74
Target Start/End: Original strand, 45546977 - 45547013
Alignment:
Q  38 ttttaaaaaagtcttgaggtattcaatcaagattttt 74  Q
    ||||| |||||||||| ||||||||||||||||||||    
T  45546977 ttttataaaagtcttgtggtattcaatcaagattttt 45547013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0922 (Bit Score: 67; Significance: 7e-30; HSPs: 1)
Name: scaffold0922
Description:

Target: scaffold0922; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 19 - 118
Target Start/End: Original strand, 4201 - 4300
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||| ||||       |||||||||||||||||||||||||||||    
T  4201 caatcaagactctttgtaattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatt 4300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 67; Significance: 7e-30; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 19 - 118
Target Start/End: Complemental strand, 14262638 - 14262539
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||       ||||||||||||||||||||||| |||||    
T  14262638 caatcaagactctttgtcatttttaaaaagtcttgaggtattcaatcaagatttttcatcatttaaaaaaagtcttgtggtattcaaaatcatttaaatt 14262539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 19 - 118
Target Start/End: Original strand, 31895696 - 31895795
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||| ||||       |||||||||||||||||||||||||||||    
T  31895696 caatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatt 31895795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 19 - 118
Target Start/End: Original strand, 34773409 - 34773508
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||        ||||||||||||||||||||||||||||    
T  34773409 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaaatcttgtggtattcaaaatcattcaaatt 34773508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 19 - 118
Target Start/End: Complemental strand, 30385262 - 30385163
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||| | ||||||| | ||       |||||||||||||||||||||||||||||    
T  30385262 caatcaagactctttgtcattttaaaaaagtattgaggtattcaatcaaaaattttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatt 30385163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 19 - 118
Target Start/End: Complemental strand, 34759256 - 34759156
Alignment:
Q  19 caatcaagactctttgtcattttaa-aaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaat 117  Q
    ||||||||||||||||||||||||| ||||||||||| |||||||||||||| ||||||| | ||       ||||||||||||||||||||||||||||    
T  34759256 caatcaagactctttgtcattttaaaaaaagtcttgaagtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaat 34759157  T
Q  118 t 118  Q
    |    
T  34759156 t 34759156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 42 - 118
Target Start/End: Original strand, 7497099 - 7497175
Alignment:
Q  42 aaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    |||||||||||| ||||||||||||||||||||||| | ||       |||||||||||||||||||||||||||||    
T  7497099 aaaaaagtcttgtggtattcaatcaagatttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatt 7497175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 19 - 118
Target Start/End: Complemental strand, 6197683 - 6197584
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| |||||||||||| |||||||||||| ||||||||||||||| | || || | ||       |||| ||||||||||||||||||||||||    
T  6197683 caatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatt 6197584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 19 - 69
Target Start/End: Complemental strand, 2300943 - 2300893
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 69  Q
    ||||||||| |||||||||||| |||||||||||| |||||||||||||||    
T  2300943 caatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaaga 2300893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 21 - 118
Target Start/End: Original strand, 7051847 - 7051944
Alignment:
Q  21 atcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||| |||||||||||| |||||||||||| ||||| ||||||||| | ||||| | ||       ||| |||| ||||||||||||||||||||    
T  7051847 atcaagattctttgtcatttaaaaaaagtcttgtggtatacaatcaagactcttcatcacttaaaaaaagtcgtgtgatattcaaaatcattcaaatt 7051944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 29076598 - 29076650
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    ||||||||| |||||||||||| |||||||||||| ||||||||||| |||||    
T  29076598 caatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatctagatt 29076650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 29111571 - 29111623
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    ||||||||| |||||||||||| |||||||||||| ||||||||||| |||||    
T  29111571 caatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatctagatt 29111623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 118 - 166
Target Start/End: Complemental strand, 4200468 - 4200418
Alignment:
Q  118 tcttttatgaaaagatga--tttcttgagattgtttttattttaaaagtta 166  Q
    ||||| ||||||||||||  |||||||||||||||||||||||||||||||    
T  4200468 tctttcatgaaaagatgagatttcttgagattgtttttattttaaaagtta 4200418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 118 - 166
Target Start/End: Original strand, 31895870 - 31895920
Alignment:
Q  118 tcttttatgaaaagatga--tttcttgagattgtttttattttaaaagtta 166  Q
    ||||| ||||||||||||  |||||||||||||||||||||||||||||||    
T  31895870 tctttcatgaaaagatgagatttcttgagattgtttttattttaaaagtta 31895920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 19 - 118
Target Start/End: Original strand, 1391624 - 1391723
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| || ||||||||| || ||||||||| ||||||||||||||| | || || | ||       |||| ||||||||||||||||||||||||    
T  1391624 caatcaagattcattgtcatttaaataaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatt 1391723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 134 - 166
Target Start/End: Original strand, 31067675 - 31067707
Alignment:
Q  134 gatttcttgagattgtttttattttaaaagtta 166  Q
    |||||||||||||||||||||||||||||||||    
T  31067675 gatttcttgagattgtttttattttaaaagtta 31067707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 118 - 166
Target Start/End: Complemental strand, 14262464 - 14262414
Alignment:
Q  118 tcttttatgaaaagatg--atttcttgagattgtttttattttaaaagtta 166  Q
    ||||| |||||||||||  ||||||||||||||||||| ||||||||||||    
T  14262464 tctttcatgaaaagatgggatttcttgagattgtttttcttttaaaagtta 14262414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 69
Target Start/End: Original strand, 656966 - 657015
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 69  Q
    ||||||||| |||||| ||||| |||||||||||| |||||||||||||||    
T  656966 caatcaagattctttg-catttaaaaaaagtcttgtggtattcaatcaaga 657015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 69
Target Start/End: Original strand, 28002665 - 28002715
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 69  Q
    ||||||||| | |||||||||| |||||||||||  |||||||||||||||    
T  28002665 caatcaagattttttgtcatttaaaaaaagtcttctggtattcaatcaaga 28002715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 69
Target Start/End: Original strand, 31895654 - 31895704
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 69  Q
    ||||||||||| ||||  |||| |||||||||||| |||||||||||||||    
T  31895654 caatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaaga 31895704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 69
Target Start/End: Original strand, 34773367 - 34773417
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 69  Q
    ||||||||||| ||||  |||| |||||||||||| |||||||||||||||    
T  34773367 caatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaaga 34773417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 1391582 - 1391634
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    |||||||||||||||   |||| |||||||||||| | |||||||||||||||    
T  1391582 caatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagatt 1391634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 2300985 - 2300933
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    |||||||||||||||   |||| |||||||||||| | |||||||||||||||    
T  2300985 caatcaagactcttttcaatttaaaaaaagtcttgtgttattcaatcaagatt 2300933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 6197725 - 6197673
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    |||||||||||||||   |||| |||||||||||| | |||||||||||||||    
T  6197725 caatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagatt 6197673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 74
Target Start/End: Complemental strand, 10644052 - 10644016
Alignment:
Q  38 ttttaaaaaagtcttgaggtattcaatcaagattttt 74  Q
    ||||||||||||||| |||||||||||||||| ||||    
T  10644052 ttttaaaaaagtctttaggtattcaatcaagactttt 10644016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 162
Target Start/End: Complemental strand, 30385105 - 30385054
Alignment:
Q  113 caaattcttttatgaaaagatga--tttcttgagattgtttttattttaaaa 162  Q
    |||| ||||| ||||||||||||  |||||||||||||||||| ||||||||    
T  30385105 caaagtctttcatgaaaagatgagatttcttgagattgtttttcttttaaaa 30385054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 74
Target Start/End: Original strand, 30877898 - 30877934
Alignment:
Q  38 ttttaaaaaagtcttgaggtattcaatcaagattttt 74  Q
    ||||||||||||||| |||||||||||||||| ||||    
T  30877898 ttttaaaaaagtctttaggtattcaatcaagactttt 30877934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0543 (Bit Score: 63; Significance: 2e-27; HSPs: 3)
Name: scaffold0543
Description:

Target: scaffold0543; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 19 - 118
Target Start/End: Original strand, 10561 - 10660
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| || |||| ||||        ||||||||||||||||||||||||||||    
T  10561 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttctcatcatttaaaaaaaatcttgtggtattcaaaatcattcaaatt 10660  T

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Target: scaffold0543; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 118 - 166
Target Start/End: Original strand, 10735 - 10785
Alignment:
Q  118 tcttttatgaaaagatga--tttcttgagattgtttttattttaaaagtta 166  Q
    ||||| ||||||||||||  |||||||||||||||||| ||||||||||||    
T  10735 tctttcatgaaaagatgagatttcttgagattgtttttgttttaaaagtta 10785  T

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Target: scaffold0543; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 69
Target Start/End: Original strand, 10519 - 10569
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 69  Q
    ||||||||||| ||||  |||| |||||||||||| |||||||||||||||    
T  10519 caatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaaga 10569  T

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Target: scaffold0306 (Bit Score: 63; Significance: 2e-27; HSPs: 2)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 19 - 118
Target Start/End: Original strand, 13883 - 13982
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||| | ||       |||||||||||||||||||||||||||||    
T  13883 caatcaagactctttgtcattttaaaaaagtattgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatt 13982  T

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Target: scaffold0306; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 118 - 166
Target Start/End: Original strand, 14047 - 14097
Alignment:
Q  118 tcttttatgaaaagatga--tttcttgagattgtttttattttaaaagtta 166  Q
    ||||| ||||||||||||  |||||||||||||||||| ||||||||||||    
T  14047 tctttcatgaaaagatgagatttcttgagattgtttttcttttaaaagtta 14097  T

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Target: scaffold0152 (Bit Score: 63; Significance: 2e-27; HSPs: 3)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 19 - 118
Target Start/End: Complemental strand, 21444 - 21345
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||| | ||       |||||||||||||||||||||||||||||    
T  21444 caatcaagactctttgtcattttaaaaaagtattgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatt 21345  T

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Target: scaffold0152; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 118 - 166
Target Start/End: Complemental strand, 21280 - 21230
Alignment:
Q  118 tcttttatgaaaagatga--tttcttgagattgtttttattttaaaagtta 166  Q
    ||||| ||||||||||||  |||||||||||||||||| ||||||||||||    
T  21280 tctttcatgaaaagatgagatttcttgagattgtttttcttttaaaagtta 21230  T

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Target: scaffold0152; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 118 - 166
Target Start/End: Original strand, 28517 - 28567
Alignment:
Q  118 tcttttatgaaaagatga--tttcttgagattgtttttattttaaaagtta 166  Q
    ||||| ||||||||||||  |||||||||||||||||| ||||||||||||    
T  28517 tctttcatgaaaagatgagatttcttgagattgtttttcttttaaaagtta 28567  T

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Target: scaffold0110 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 19 - 116
Target Start/End: Complemental strand, 39823 - 39726
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaa 116  Q
    ||||||||||||||||||||||| ||||||||||||  ||||||||||||||||||||| | ||       ||| |||||||||||||||||||||||    
T  39823 caatcaagactctttgtcatttttaaaaagtcttgaactattcaatcaagatttttcatcacttaaaaaatgtcatgtggtattcaaaatcattcaaa 39726  T

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Target: scaffold0110; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 118 - 166
Target Start/End: Complemental strand, 39649 - 39599
Alignment:
Q  118 tcttttatgaaaagat--gatttcttgagattgtttttattttaaaagtta 166  Q
    ||||| ||||||||||  |||||||||||||||||||| ||||||||||||    
T  39649 tctttcatgaaaagataagatttcttgagattgtttttcttttaaaagtta 39599  T

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Target: scaffold1504 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold1504
Description:

Target: scaffold1504; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 19 - 118
Target Start/End: Original strand, 864 - 964
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcatta-tttnnnnnnngtcttgtggtattcaaaatcattcaaat 117  Q
    ||||||||||||||||||||||||||||| || |||||||||||||||||| ||||||| | ||        ||||||||||||||||||||||||||||    
T  864 caatcaagactctttgtcattttaaaaaaatcatgaggtattcaatcaagacttttcatcacttaaaaaaaagtcttgtggtattcaaaatcattcaaat 963  T
Q  118 t 118  Q
    |    
T  964 t 964  T

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Target: scaffold0054 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 19 - 63
Target Start/End: Complemental strand, 37071 - 37027
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaa 63  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  37071 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaa 37027  T

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Target: scaffold0010 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 3)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 19 - 76
Target Start/End: Original strand, 233738 - 233795
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttca 76  Q
    |||||||||||||||||||||||||||||||||| |||| ||||||||| | ||||||    
T  233738 caatcaagactctttgtcattttaaaaaagtcttaaggtcttcaatcaaaacttttca 233795  T

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Target: scaffold0010; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 19 - 76
Target Start/End: Original strand, 234586 - 234643
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttca 76  Q
    |||||||||||||||||||||||||||||||||| |||| ||||||||| | ||||||    
T  234586 caatcaagactctttgtcattttaaaaaagtcttaaggtcttcaatcaaaacttttca 234643  T

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Target: scaffold0010; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 76
Target Start/End: Original strand, 222570 - 222627
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttca 76  Q
    ||||||| |||||||||||||||||||||||||| |||| ||||||||| | ||||||    
T  222570 caatcaaaactctttgtcattttaaaaaagtcttaaggtcttcaatcaaaacttttca 222627  T

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Target: scaffold0400 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 2)
Name: scaffold0400
Description:

Target: scaffold0400; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 19 - 118
Target Start/End: Complemental strand, 15239 - 15140
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| |||||||||||| ||||||||||||  |||||||||||||| | || || | ||       |||| ||||||||||||||||||||||||    
T  15239 caatcaagattctttgtcatttaaaaaaagtcttgtagtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatt 15140  T

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Target: scaffold0400; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 15281 - 15229
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    |||||||||||||||   |||| |||||||||||| | |||||||||||||||    
T  15281 caatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagatt 15229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0365 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 2)
Name: scaffold0365
Description:

Target: scaffold0365; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 19 - 118
Target Start/End: Complemental strand, 15882 - 15783
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| |||||||||||| ||||||||||||  |||||||||||||| | || || | ||       |||| ||||||||||||||||||||||||    
T  15882 caatcaagattctttgtcatttaaaaaaagtcttgtagtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatt 15783  T

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Target: scaffold0365; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 15924 - 15872
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    |||||||||||||||   |||| |||||||||||| | |||||||||||||||    
T  15924 caatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagatt 15872  T

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Target: scaffold0037 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 19 - 118
Target Start/End: Original strand, 100212 - 100311
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaatt 118  Q
    ||||||||| |||||||||||| |||||||||||| |||| |||||||||| | || || | ||       |||| ||||||||||||||||||||||||    
T  100212 caatcaagattctttgtcatttaaaaaaagtcttgtggtactcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatt 100311  T

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Target: scaffold0004 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 118
Target Start/End: Original strand, 102094 - 102195
Alignment:
Q  19 caatcaagactctttgtcattttaaaaa--agtcttgaggtattcaatcaagatttttcattatttnnnnnnngtcttgtggtattcaaaatcattcaaa 116  Q
    ||||||||| |||||||||||| |||||  ||||||| ||||||||||||||| | || || | ||       |||| ||||||||||||||||||||||    
T  102094 caatcaagattctttgtcatttaaaaaaagagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaa 102193  T
Q  117 tt 118  Q
    ||    
T  102194 tt 102195  T

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Target: scaffold0276 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0276
Description:

Target: scaffold0276; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 67
Target Start/End: Complemental strand, 745 - 697
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaa 67  Q
    ||||||||| |||||||||||| |||||||| ||| |||||||||||||    
T  745 caatcaagattctttgtcatttaaaaaaagtattgtggtattcaatcaa 697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0276; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 787 - 735
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 71  Q
    |||||||||||||||   |||| |||||||||||| | |||||||||||||||    
T  787 caatcaagactctttacaatttaaaaaaagtcttgtgttattcaatcaagatt 735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 118 - 166
Target Start/End: Complemental strand, 58108 - 58058
Alignment:
Q  118 tcttttatgaaaagatga--tttcttgagattgtttttattttaaaagtta 166  Q
    ||||| ||||||||||||  |||||||||||||||||| ||||||||||||    
T  58108 tctttcatgaaaagatgagatttcttgagattgtttttcttttaaaagtta 58058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 69
Target Start/End: Complemental strand, 39101 - 39051
Alignment:
Q  19 caatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 69  Q
    ||||||||| ||||| |||||| |||||||||||| |||||||||| ||||    
T  39101 caatcaagattctttatcatttaaaaaaagtcttgtggtattcaataaaga 39051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0202 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0202
Description:

Target: scaffold0202; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 74
Target Start/End: Complemental strand, 16582 - 16546
Alignment:
Q  38 ttttaaaaaagtcttgaggtattcaatcaagattttt 74  Q
    |||||||||||||||| |||||| |||||||||||||    
T  16582 ttttaaaaaagtcttgtggtatttaatcaagattttt 16546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 74
Target Start/End: Complemental strand, 81820 - 81784
Alignment:
Q  38 ttttaaaaaagtcttgaggtattcaatcaagattttt 74  Q
    ||||| |||||||||| ||||||||||||||||||||    
T  81820 ttttataaaagtcttgtggtattcaatcaagattttt 81784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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