View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1264_2D_low_11 (Length: 417)
Name: NF1264_2D_low_11
Description: NF1264_2D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1264_2D_low_11 |
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Alignment Details
Target: chr7 (Bit Score: 379; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 379; E-Value: 0
Query Start/End: Original strand, 10 - 403
Target Start/End: Original strand, 40514444 - 40514835
Alignment:
| Q |
10 |
atgagatgattctaatgaggaaaccatttccttcctttgttatcattttcactctccatgcatttcttactgaaaatatttgagatgatggtgtaagtaa |
109 |
Q |
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| T |
40514444 |
atgagatgattctaatgaggaaaccatttccttcctttgttatcattttcactctccatgcatttcttactgaaaatatttgagatgatggt--aagtaa |
40514541 |
T |
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| Q |
110 |
atgtgatcatttgaaaaatggatatcgtacagtgatacgcatgctaattaaatcaaattccaatattatttgtgggttatatgatcattttaagtgctgt |
209 |
Q |
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| T |
40514542 |
atgtgatcatttgaaaaatggatttcgtacagtgatacgcatgctaattaaatcaaattccaatattatttgtgggttatatgatcattttaagtgctgt |
40514641 |
T |
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| Q |
210 |
ttggttagaatccactctatgtaagttattgccgacatatcacttcacaatatttggcattgacactcacggcacatggttattgttatatttaaggcaa |
309 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40514642 |
ttggttagaatccactctatgtaagttattgccgacatatcacttcacaatatttggcattgacactcacggcacatggttattgttatatttaaggcaa |
40514741 |
T |
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| Q |
310 |
acaccaaagctgtcttaggtctttcgtgatgataccaccctatgccaaaagtttatacaaacatttgtgtgttgtgcgcatggtaggatgtcca |
403 |
Q |
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| T |
40514742 |
acaccaaagctgtcttaggtctttcgtgatgataccaccctatgccaaaagtttatacaaacatttgtgtgttgtgcgcatggtaggatgtcca |
40514835 |
T |
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