View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1264_2D_low_16 (Length: 365)

Name: NF1264_2D_low_16
Description: NF1264_2D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1264_2D_low_16
NF1264_2D_low_16
[»] chr3 (89 HSPs)
chr3 (5-130)||(48755321-48755446)
chr3 (7-124)||(26498678-26498795)
chr3 (7-129)||(15031183-15031305)
chr3 (5-129)||(1426479-1426603)
chr3 (8-128)||(21514740-21514860)
chr3 (7-129)||(33343001-33343122)
chr3 (5-124)||(18445565-18445684)
chr3 (9-126)||(38498133-38498250)
chr3 (12-131)||(20758952-20759071)
chr3 (17-129)||(44967850-44967962)
chr3 (18-128)||(42453039-42453149)
chr3 (21-124)||(11989045-11989148)
chr3 (21-124)||(26498548-26498651)
chr3 (21-124)||(38498279-38498382)
chr3 (16-129)||(39541669-39541782)
chr3 (21-105)||(39541786-39541870)
chr3 (5-129)||(43562760-43562884)
chr3 (21-124)||(20759103-20759206)
chr3 (7-59)||(14434802-14434854)
chr3 (21-124)||(15031396-15031499)
chr3 (5-89)||(11989205-11989289)
chr3 (21-125)||(41984904-41985008)
chr3 (21-89)||(48755504-48755572)
chr3 (21-89)||(1426651-1426719)
chr3 (5-57)||(15005025-15005077)
chr3 (21-125)||(18445404-18445508)
chr3 (259-327)||(48315023-48315091)
chr3 (259-327)||(48376829-48376897)
chr3 (21-124)||(21514920-21515023)
chr3 (262-308)||(10440697-10440743)
chr3 (267-327)||(2105705-2105765)
chr3 (21-89)||(15005134-15005202)
chr3 (253-316)||(13042793-13042856)
chr3 (253-316)||(13050870-13050933)
chr3 (21-124)||(33343180-33343283)
chr3 (259-318)||(35492796-35492855)
chr3 (21-123)||(14434641-14434743)
chr3 (253-327)||(21914064-21914138)
chr3 (253-327)||(45096020-45096094)
chr3 (259-316)||(8113561-8113618)
chr3 (40-129)||(33412199-33412288)
chr3 (263-316)||(52119381-52119434)
chr3 (262-327)||(53633619-53633684)
chr3 (275-308)||(54584046-54584079)
chr3 (275-327)||(1149084-1149136)
chr3 (275-339)||(2078222-2078286)
chr3 (275-315)||(2662098-2662138)
chr3 (275-327)||(4216414-4216466)
chr3 (9-53)||(15031323-15031367)
chr3 (275-327)||(16980369-16980421)
chr3 (275-327)||(29631180-29631232)
chr3 (21-89)||(44968031-44968098)
chr3 (259-307)||(51614223-51614271)
chr3 (9-128)||(26920152-26920270)
chr3 (253-316)||(35191810-35191873)
chr3 (263-322)||(38869521-38869580)
chr3 (261-308)||(39869808-39869855)
chr3 (257-316)||(47099032-47099091)
chr3 (266-316)||(10926474-10926524)
chr3 (262-308)||(11969652-11969698)
chr3 (259-297)||(14771355-14771393)
chr3 (11-53)||(15031355-15031397)
chr3 (273-327)||(19745354-19745408)
chr3 (261-327)||(21331418-21331484)
chr3 (258-316)||(21513293-21513351)
chr3 (17-77)||(26840038-26840095)
chr3 (253-291)||(41990577-41990615)
chr3 (266-308)||(48417873-48417915)
chr3 (275-321)||(50570204-50570250)
chr3 (263-316)||(5702181-5702233)
chr3 (263-308)||(7859495-7859540)
chr3 (259-308)||(15507270-15507319)
chr3 (275-320)||(25441515-25441560)
chr3 (263-316)||(30200831-30200884)
chr3 (275-320)||(31214635-31214680)
chr3 (270-327)||(33223862-33223919)
chr3 (259-316)||(46469282-46469338)
chr3 (259-316)||(53996304-53996361)
chr3 (262-326)||(8139710-8139774)
chr3 (275-327)||(10498710-10498762)
chr3 (259-326)||(12043095-12043163)
chr3 (275-327)||(16792989-16793041)
chr3 (275-327)||(18870740-18870792)
chr3 (260-308)||(19468464-19468512)
chr3 (275-323)||(25902778-25902826)
chr3 (21-129)||(26920331-26920439)
chr3 (275-319)||(28694003-28694047)
chr3 (263-327)||(44579630-44579694)
chr3 (275-315)||(54230114-54230154)
[»] chr1 (72 HSPs)
chr1 (5-129)||(50335436-50335560)
chr1 (5-129)||(37607968-37608091)
chr1 (5-104)||(13735465-13735564)
chr1 (10-119)||(8097880-8097989)
chr1 (21-124)||(50335617-50335720)
chr1 (11-129)||(11633189-11633307)
chr1 (25-124)||(42847198-42847297)
chr1 (21-124)||(32373986-32374088)
chr1 (7-89)||(32374128-32374203)
chr1 (39-123)||(37608165-37608249)
chr1 (7-127)||(42847022-42847144)
chr1 (259-329)||(38448865-38448935)
chr1 (263-327)||(30795695-30795759)
chr1 (275-323)||(50263378-50263426)
chr1 (261-316)||(34808564-34808619)
chr1 (253-324)||(51509640-51509711)
chr1 (266-328)||(8269374-8269436)
chr1 (261-327)||(28979277-28979343)
chr1 (275-320)||(10843336-10843381)
chr1 (278-327)||(13779572-13779621)
chr1 (263-316)||(47528450-47528503)
chr1 (259-308)||(47719106-47719155)
chr1 (259-316)||(50638915-50638972)
chr1 (258-314)||(9872103-9872159)
chr1 (263-311)||(17221523-17221571)
chr1 (259-315)||(24124829-24124885)
chr1 (260-308)||(24631852-24631900)
chr1 (275-327)||(27127218-27127270)
chr1 (275-327)||(31061918-31061970)
chr1 (259-327)||(34632163-34632231)
chr1 (275-327)||(52441526-52441578)
chr1 (277-308)||(40618923-40618954)
chr1 (260-327)||(44678017-44678084)
chr1 (282-321)||(52202319-52202358)
chr1 (11-53)||(13735580-13735622)
chr1 (30-84)||(13735631-13735685)
chr1 (253-295)||(31401646-31401688)
chr1 (266-327)||(2817379-2817440)
chr1 (275-320)||(3509956-3510001)
chr1 (278-327)||(3935802-3935851)
chr1 (275-320)||(10132459-10132504)
chr1 (253-298)||(10385311-10385356)
chr1 (263-316)||(13054878-13054931)
chr1 (253-314)||(13615605-13615666)
chr1 (275-316)||(13794523-13794564)
chr1 (275-316)||(17283956-17283997)
chr1 (275-320)||(22946565-22946610)
chr1 (262-315)||(23460483-23460535)
chr1 (278-327)||(26803469-26803518)
chr1 (263-324)||(29251751-29251812)
chr1 (9-46)||(32374098-32374135)
chr1 (275-316)||(35473957-35473998)
chr1 (281-318)||(35805318-35805355)
chr1 (9-46)||(37608082-37608119)
chr1 (275-316)||(39387806-39387847)
chr1 (266-327)||(41763161-41763222)
chr1 (258-315)||(47961287-47961344)
chr1 (257-321)||(12500924-12500987)
chr1 (81-129)||(13735417-13735465)
chr1 (275-327)||(21400038-21400090)
chr1 (259-327)||(23405357-23405425)
chr1 (275-327)||(26705594-26705646)
chr1 (256-308)||(28679695-28679747)
chr1 (275-323)||(30548106-30548154)
chr1 (275-315)||(30561729-30561769)
chr1 (275-327)||(31092655-31092707)
chr1 (264-308)||(32826709-32826753)
chr1 (275-327)||(36371055-36371107)
chr1 (261-305)||(40613039-40613083)
chr1 (275-327)||(42045387-42045439)
chr1 (275-307)||(45418078-45418110)
chr1 (275-327)||(47417777-47417829)
[»] chr6 (48 HSPs)
chr6 (5-135)||(13536549-13536679)
chr6 (5-129)||(10588031-10588155)
chr6 (5-129)||(19295441-19295565)
chr6 (5-127)||(25089149-25089271)
chr6 (29-129)||(28752237-28752337)
chr6 (5-124)||(21222625-21222746)
chr6 (5-129)||(10862008-10862132)
chr6 (21-124)||(10587887-10587990)
chr6 (21-124)||(19295281-19295384)
chr6 (33-133)||(13536749-13536848)
chr6 (21-124)||(21222465-21222568)
chr6 (21-124)||(26705204-26705307)
chr6 (7-129)||(10672780-10672900)
chr6 (8-88)||(12651245-12651325)
chr6 (259-327)||(21847188-21847256)
chr6 (259-315)||(32193858-32193914)
chr6 (261-316)||(4450267-4450322)
chr6 (275-318)||(19554156-19554199)
chr6 (253-328)||(23629830-23629905)
chr6 (21-124)||(25089328-25089431)
chr6 (275-326)||(32409193-32409244)
chr6 (253-315)||(35110060-35110122)
chr6 (263-308)||(1918461-1918506)
chr6 (10-91)||(19780509-19780590)
chr6 (274-327)||(30370164-30370217)
chr6 (267-327)||(4922415-4922475)
chr6 (275-327)||(8810634-8810686)
chr6 (253-308)||(404176-404231)
chr6 (35-86)||(10862202-10862253)
chr6 (11-46)||(13536703-13536738)
chr6 (253-316)||(17829301-17829364)
chr6 (78-129)||(26705043-26705094)
chr6 (257-327)||(8217377-8217447)
chr6 (261-315)||(30639427-30639481)
chr6 (266-308)||(31971542-31971584)
chr6 (275-316)||(334145-334186)
chr6 (263-316)||(655752-655805)
chr6 (266-327)||(32053782-32053843)
chr6 (275-327)||(331901-331953)
chr6 (275-327)||(788860-788912)
chr6 (263-327)||(2726420-2726484)
chr6 (275-327)||(7081669-7081721)
chr6 (275-327)||(12412271-12412323)
chr6 (263-327)||(15291693-15291757)
chr6 (275-327)||(17151230-17151282)
chr6 (275-327)||(18256877-18256929)
chr6 (9-53)||(25089255-25089299)
chr6 (3-31)||(26705089-26705117)
[»] chr8 (76 HSPs)
chr8 (1-124)||(37543948-37544071)
chr8 (5-129)||(21124322-21124446)
chr8 (5-129)||(25149398-25149522)
chr8 (2-129)||(35202593-35202720)
chr8 (9-126)||(22426845-22426961)
chr8 (9-124)||(12106999-12107114)
chr8 (5-126)||(41358842-41358963)
chr8 (5-129)||(21184294-21184417)
chr8 (21-124)||(12106867-12106970)
chr8 (5-126)||(23976251-23976370)
chr8 (21-124)||(23976090-23976194)
chr8 (10-131)||(22469597-22469718)
chr8 (7-126)||(18323997-18324114)
chr8 (5-126)||(4289085-4289206)
chr8 (21-125)||(25149237-25149341)
chr8 (21-135)||(18324173-18324286)
chr8 (11-104)||(23625054-23625147)
chr8 (21-124)||(21124535-21124638)
chr8 (21-124)||(22469433-22469536)
chr8 (257-326)||(9655994-9656063)
chr8 (3-87)||(22326564-22326648)
chr8 (5-113)||(24609186-24609294)
chr8 (3-126)||(31253933-31254057)
chr8 (54-114)||(37494325-37494385)
chr8 (5-58)||(29585610-29585663)
chr8 (260-316)||(19778070-19778126)
chr8 (21-89)||(35202775-35202843)
chr8 (277-327)||(23816784-23816834)
chr8 (266-320)||(42208475-42208529)
chr8 (253-298)||(7839111-7839156)
chr8 (263-315)||(11963406-11963459)
chr8 (266-327)||(13357447-13357508)
chr8 (250-327)||(27750894-27750971)
chr8 (259-328)||(34968548-34968616)
chr8 (263-320)||(44019550-44019607)
chr8 (275-307)||(1200360-1200392)
chr8 (275-323)||(9055420-9055468)
chr8 (264-316)||(13477905-13477957)
chr8 (263-327)||(32192888-32192952)
chr8 (275-327)||(33451364-33451416)
chr8 (275-327)||(37015851-37015903)
chr8 (259-315)||(37938501-37938557)
chr8 (263-319)||(38282842-38282898)
chr8 (261-308)||(7679915-7679962)
chr8 (260-315)||(10320502-10320557)
chr8 (275-326)||(17704008-17704059)
chr8 (21-124)||(21185838-21185941)
chr8 (21-84)||(22326446-22326509)
chr8 (253-316)||(30623298-30623361)
chr8 (282-320)||(3889891-3889929)
chr8 (257-327)||(8984491-8984561)
chr8 (277-327)||(13286125-13286175)
chr8 (261-327)||(26695306-26695372)
chr8 (5-35)||(37494437-37494467)
chr8 (275-320)||(1244720-1244765)
chr8 (259-308)||(4830021-4830070)
chr8 (275-308)||(9019579-9019612)
chr8 (259-308)||(9067095-9067144)
chr8 (263-316)||(9635056-9635109)
chr8 (266-327)||(11708980-11709041)
chr8 (266-327)||(27587215-27587276)
chr8 (9-46)||(29585582-29585619)
chr8 (275-320)||(31888027-31888072)
chr8 (266-327)||(33743569-33743630)
chr8 (275-316)||(36018545-36018586)
chr8 (275-324)||(37938745-37938794)
chr8 (274-327)||(37999434-37999487)
chr8 (266-307)||(42700519-42700560)
chr8 (262-295)||(44146749-44146782)
chr8 (275-327)||(11621169-11621221)
chr8 (266-298)||(18959172-18959204)
chr8 (259-295)||(21557459-21557495)
chr8 (259-327)||(23852905-23852973)
chr8 (260-308)||(29186515-29186563)
chr8 (275-327)||(39821878-39821930)
chr8 (259-323)||(45396563-45396626)
[»] chr4 (102 HSPs)
chr4 (1-127)||(55382712-55382838)
chr4 (5-129)||(3369960-3370084)
chr4 (5-129)||(18830734-18830854)
chr4 (5-129)||(10380755-10380879)
chr4 (3-104)||(11821743-11821844)
chr4 (5-129)||(2634184-2634308)
chr4 (5-128)||(30470978-30471101)
chr4 (5-125)||(5448195-5448315)
chr4 (9-129)||(22018014-22018134)
chr4 (5-124)||(9826632-9826751)
chr4 (6-129)||(47943609-47943732)
chr4 (7-126)||(2063144-2063263)
chr4 (30-129)||(47463809-47463908)
chr4 (17-126)||(29908887-29908996)
chr4 (5-126)||(37695092-37695213)
chr4 (5-128)||(1387502-1387626)
chr4 (23-124)||(10757570-10757671)
chr4 (23-124)||(10970741-10970842)
chr4 (5-89)||(18836438-18836523)
chr4 (21-121)||(22017885-22017985)
chr4 (5-129)||(30378738-30378861)
chr4 (253-316)||(38416062-38416125)
chr4 (21-123)||(5324684-5324786)
chr4 (21-94)||(3391183-3391256)
chr4 (259-320)||(31352113-31352174)
chr4 (20-133)||(37694892-37695004)
chr4 (21-89)||(5448372-5448440)
chr4 (21-124)||(2063322-2063425)
chr4 (21-124)||(18830575-18830677)
chr4 (13-115)||(2232538-2232640)
chr4 (21-125)||(9826808-9826912)
chr4 (275-328)||(11144680-11144733)
chr4 (55-124)||(30378948-30379017)
chr4 (259-308)||(42316823-42316872)
chr4 (72-129)||(47463916-47463973)
chr4 (10-46)||(18500708-18500744)
chr4 (259-315)||(21052556-21052612)
chr4 (9-128)||(8951152-8951271)
chr4 (253-316)||(25978323-25978385)
chr4 (264-327)||(46676502-46676565)
chr4 (20-86)||(8951058-8951124)
chr4 (11-53)||(11821858-11821900)
chr4 (11-53)||(30470920-30470962)
chr4 (266-316)||(56551598-56551648)
chr4 (275-316)||(6087752-6087793)
chr4 (266-327)||(7230274-7230335)
chr4 (266-327)||(11949769-11949830)
chr4 (263-328)||(12058312-12058377)
chr4 (263-308)||(19908705-19908750)
chr4 (258-327)||(49473639-49473708)
chr4 (275-323)||(12439662-12439710)
chr4 (60-124)||(18836280-18836344)
chr4 (263-327)||(24664994-24665058)
chr4 (263-327)||(36478985-36479049)
chr4 (275-327)||(48472955-48473007)
chr4 (259-315)||(53190301-53190357)
chr4 (21-124)||(2634024-2634127)
chr4 (260-327)||(36203230-36203297)
chr4 (261-320)||(42756107-42756166)
chr4 (275-318)||(43782320-43782363)
chr4 (253-316)||(50442741-50442803)
chr4 (260-327)||(51002281-51002348)
chr4 (262-316)||(470320-470374)
chr4 (9-47)||(5324815-5324853)
chr4 (253-327)||(7967618-7967692)
chr4 (277-315)||(8027414-8027452)
chr4 (277-327)||(8494981-8495031)
chr4 (266-328)||(16733525-16733587)
chr4 (266-328)||(41520947-41521009)
chr4 (278-320)||(46409499-46409541)
chr4 (275-317)||(49949338-49949380)
chr4 (9-46)||(1387474-1387511)
chr4 (9-46)||(2634156-2634193)
chr4 (5-66)||(5324843-5324904)
chr4 (263-308)||(6520084-6520129)
chr4 (9-46)||(10757702-10757739)
chr4 (9-46)||(10970873-10970910)
chr4 (9-46)||(12140799-12140836)
chr4 (277-326)||(16054554-16054603)
chr4 (266-327)||(20799400-20799461)
chr4 (275-316)||(21317353-21317394)
chr4 (277-322)||(22279537-22279582)
chr4 (257-326)||(23775513-23775582)
chr4 (5-46)||(37695060-37695101)
chr4 (259-316)||(43027297-43027354)
chr4 (278-327)||(53142600-53142649)
chr4 (259-316)||(56497607-56497664)
chr4 (263-295)||(1701635-1701667)
chr4 (275-327)||(2186348-2186400)
chr4 (264-316)||(6789430-6789482)
chr4 (262-306)||(10006355-10006399)
chr4 (275-327)||(11286796-11286848)
chr4 (54-86)||(11821936-11821968)
chr4 (275-327)||(13121538-13121590)
chr4 (275-327)||(16740393-16740445)
chr4 (259-315)||(18915045-18915101)
chr4 (10-46)||(30378852-30378888)
chr4 (275-315)||(34247446-34247486)
chr4 (10-46)||(47144767-47144803)
chr4 (275-315)||(48643276-48643316)
chr4 (275-327)||(50362154-50362206)
chr4 (275-327)||(52270045-52270097)
[»] chr7 (60 HSPs)
chr7 (5-125)||(27508576-27508695)
chr7 (5-130)||(5080269-5080394)
chr7 (5-129)||(38761152-38761276)
chr7 (9-128)||(15000641-15000761)
chr7 (6-129)||(3404453-3404576)
chr7 (5-89)||(6441504-6441588)
chr7 (9-129)||(43257396-43257516)
chr7 (5-96)||(14197619-14197710)
chr7 (21-122)||(5080111-5080212)
chr7 (9-129)||(36150843-36150963)
chr7 (21-124)||(27508752-27508855)
chr7 (23-124)||(3404634-3404735)
chr7 (21-121)||(15272326-15272426)
chr7 (21-124)||(14197459-14197562)
chr7 (7-87)||(37787849-37787925)
chr7 (34-124)||(45013060-45013150)
chr7 (26-129)||(29934448-29934551)
chr7 (21-124)||(38760994-38761095)
chr7 (54-124)||(45012849-45012919)
chr7 (259-320)||(2962725-2962786)
chr7 (21-89)||(6441380-6441447)
chr7 (5-45)||(38761120-38761160)
chr7 (275-320)||(7872763-7872808)
chr7 (263-316)||(21105608-21105661)
chr7 (9-46)||(27508686-27508723)
chr7 (259-316)||(41029277-41029334)
chr7 (5-46)||(45013008-45013049)
chr7 (259-308)||(45425466-45425515)
chr7 (263-316)||(46987091-46987144)
chr7 (263-323)||(3337272-3337332)
chr7 (261-308)||(2618692-2618739)
chr7 (260-327)||(5584641-5584708)
chr7 (260-327)||(5589601-5589668)
chr7 (21-124)||(15000822-15000925)
chr7 (275-318)||(34568348-34568391)
chr7 (21-124)||(36150992-36151095)
chr7 (259-306)||(38858171-38858218)
chr7 (21-124)||(43257264-43257367)
chr7 (252-326)||(3532576-3532650)
chr7 (270-308)||(3584217-3584255)
chr7 (270-316)||(8615028-8615074)
chr7 (277-327)||(8683064-8683114)
chr7 (266-316)||(18714453-18714503)
chr7 (266-320)||(39280824-39280878)
chr7 (254-320)||(41425223-41425289)
chr7 (261-327)||(42336064-42336130)
chr7 (259-308)||(1046569-1046618)
chr7 (266-327)||(10244721-10244782)
chr7 (275-316)||(21050237-21050278)
chr7 (263-316)||(23069860-23069913)
chr7 (263-316)||(24991786-24991839)
chr7 (275-327)||(3830062-3830114)
chr7 (264-320)||(10362308-10362364)
chr7 (275-327)||(22690051-22690103)
chr7 (263-327)||(24225984-24226048)
chr7 (275-327)||(30006107-30006159)
chr7 (275-315)||(30463964-30464004)
chr7 (267-327)||(34773225-34773285)
chr7 (270-326)||(41527555-41527611)
chr7 (275-327)||(47342671-47342723)
[»] chr5 (76 HSPs)
chr5 (5-129)||(13753389-13753513)
chr5 (5-122)||(10760167-10760284)
chr5 (5-123)||(19491673-19491791)
chr5 (5-126)||(30100771-30100892)
chr5 (5-127)||(2555436-2555558)
chr5 (7-125)||(21943905-21944023)
chr5 (5-129)||(30852581-30852698)
chr5 (21-122)||(21211419-21211520)
chr5 (2-89)||(17497031-17497117)
chr5 (21-124)||(21943743-21943846)
chr5 (21-121)||(17497171-17497271)
chr5 (21-123)||(20429878-20429980)
chr5 (17-115)||(34419489-34419587)
chr5 (5-89)||(11297993-11298078)
chr5 (21-125)||(19491848-19491952)
chr5 (20-129)||(19564830-19564943)
chr5 (21-124)||(13753229-13753332)
chr5 (49-104)||(21211603-21211658)
chr5 (259-316)||(27679503-27679560)
chr5 (259-331)||(35109390-35109462)
chr5 (21-124)||(2555615-2555718)
chr5 (21-124)||(43548948-43549051)
chr5 (259-315)||(11017182-11017238)
chr5 (259-327)||(28207126-28207194)
chr5 (263-306)||(22745904-22745947)
chr5 (275-320)||(11844453-11844498)
chr5 (263-316)||(18391605-18391658)
chr5 (5-66)||(20430037-20430098)
chr5 (266-327)||(30893927-30893988)
chr5 (275-328)||(36321509-36321562)
chr5 (275-327)||(1808608-1808660)
chr5 (266-326)||(5246162-5246222)
chr5 (260-320)||(11647198-11647258)
chr5 (275-315)||(18538614-18538654)
chr5 (5-121)||(31912356-31912472)
chr5 (263-327)||(37932324-37932388)
chr5 (25-85)||(43548766-43548826)
chr5 (263-330)||(20145573-20145640)
chr5 (35-138)||(30100600-30100703)
chr5 (263-297)||(5107248-5107282)
chr5 (278-308)||(6898034-6898064)
chr5 (282-328)||(13480249-13480295)
chr5 (258-308)||(16752500-16752550)
chr5 (261-315)||(28604419-28604473)
chr5 (262-316)||(31308645-31308699)
chr5 (266-316)||(37614433-37614483)
chr5 (275-327)||(596410-596463)
chr5 (259-308)||(1476109-1476158)
chr5 (253-306)||(3955561-3955614)
chr5 (278-327)||(5846023-5846072)
chr5 (9-46)||(10760139-10760176)
chr5 (5-94)||(12895558-12895647)
chr5 (275-328)||(15889404-15889457)
chr5 (275-316)||(16133080-16133121)
chr5 (263-316)||(16485966-16486019)
chr5 (259-308)||(17145347-17145396)
chr5 (275-316)||(19068454-19068495)
chr5 (278-327)||(19248473-19248522)
chr5 (263-320)||(26376967-26377024)
chr5 (278-327)||(31198703-31198752)
chr5 (263-308)||(31545884-31545929)
chr5 (258-295)||(31747119-31747156)
chr5 (275-308)||(34206240-34206273)
chr5 (266-327)||(34987157-34987218)
chr5 (263-307)||(3222745-3222789)
chr5 (275-327)||(6489001-6489053)
chr5 (263-327)||(6624770-6624834)
chr5 (275-315)||(13409434-13409474)
chr5 (263-315)||(13547453-13547505)
chr5 (254-314)||(17242674-17242734)
chr5 (275-315)||(18489091-18489131)
chr5 (260-308)||(19783635-19783683)
chr5 (275-327)||(20370145-20370197)
chr5 (275-327)||(24485693-24485745)
chr5 (259-295)||(32339761-32339797)
chr5 (260-308)||(34702503-34702551)
[»] chr2 (64 HSPs)
chr2 (5-129)||(31819910-31820033)
chr2 (9-129)||(39598671-39598791)
chr2 (9-89)||(32092891-32092971)
chr2 (5-106)||(22092878-22092979)
chr2 (1-129)||(24007036-24007164)
chr2 (23-124)||(32092759-32092860)
chr2 (21-89)||(24006915-24006983)
chr2 (5-129)||(31499510-31499635)
chr2 (5-71)||(8219193-8219258)
chr2 (261-327)||(40099385-40099450)
chr2 (267-316)||(13000690-13000739)
chr2 (266-327)||(21558812-21558873)
chr2 (263-308)||(37320520-37320565)
chr2 (267-327)||(7206119-7206179)
chr2 (277-320)||(10065474-10065517)
chr2 (253-315)||(12124551-12124613)
chr2 (250-316)||(19179040-19179106)
chr2 (24-86)||(22093039-22093101)
chr2 (266-316)||(22608532-22608582)
chr2 (278-320)||(38835258-38835300)
chr2 (3-96)||(17914034-17914126)
chr2 (259-316)||(20120720-20120777)
chr2 (263-316)||(24593381-24593434)
chr2 (266-327)||(30243244-30243305)
chr2 (275-327)||(18782555-18782607)
chr2 (259-327)||(20455885-20455953)
chr2 (259-327)||(22523011-22523079)
chr2 (275-327)||(24592861-24592913)
chr2 (275-327)||(26999104-26999156)
chr2 (259-295)||(41778943-41778979)
chr2 (253-316)||(12124689-12124752)
chr2 (259-329)||(16221345-16221415)
chr2 (261-327)||(22571866-22571932)
chr2 (258-308)||(27935069-27935119)
chr2 (257-327)||(31543006-31543076)
chr2 (262-316)||(36547237-36547291)
chr2 (278-320)||(39088817-39088859)
chr2 (253-295)||(43356535-43356577)
chr2 (259-316)||(10156022-10156079)
chr2 (275-316)||(15654884-15654925)
chr2 (21-86)||(17914149-17914214)
chr2 (275-316)||(18231488-18231529)
chr2 (263-316)||(24393250-24393303)
chr2 (279-316)||(24520658-24520695)
chr2 (266-323)||(24581023-24581080)
chr2 (275-320)||(25598577-25598622)
chr2 (259-308)||(29809339-29809388)
chr2 (266-327)||(30089043-30089104)
chr2 (266-327)||(30125647-30125708)
chr2 (261-298)||(33401577-33401614)
chr2 (9-46)||(39598639-39598676)
chr2 (266-315)||(43117196-43117245)
chr2 (275-327)||(9383224-9383276)
chr2 (275-327)||(9686451-9686503)
chr2 (275-327)||(11560492-11560544)
chr2 (275-307)||(12231891-12231923)
chr2 (281-321)||(16385413-16385453)
chr2 (275-315)||(21482534-21482574)
chr2 (275-327)||(26400745-26400797)
chr2 (263-315)||(28771588-28771640)
chr2 (275-327)||(34345370-34345422)
chr2 (263-327)||(34903511-34903575)
chr2 (275-315)||(35685076-35685116)
chr2 (262-322)||(42200686-42200746)
[»] scaffold0024 (2 HSPs)
scaffold0024 (5-124)||(127804-127923)
scaffold0024 (21-125)||(127980-128084)
[»] scaffold0066 (2 HSPs)
scaffold0066 (9-127)||(15362-15480)
scaffold0066 (2-46)||(15475-15519)
[»] scaffold0026 (3 HSPs)
scaffold0026 (5-122)||(57451-57568)
scaffold0026 (21-125)||(57625-57729)
scaffold0026 (259-313)||(75333-75387)
[»] scaffold0102 (2 HSPs)
scaffold0102 (5-129)||(23887-24011)
scaffold0102 (21-124)||(24068-24170)
[»] scaffold0003 (2 HSPs)
scaffold0003 (5-76)||(314126-314197)
scaffold0003 (9-46)||(314188-314225)
[»] scaffold0049 (1 HSPs)
scaffold0049 (21-118)||(59711-59808)
[»] scaffold0407 (4 HSPs)
scaffold0407 (3-91)||(1025-1113)
scaffold0407 (3-91)||(7489-7577)
scaffold0407 (21-89)||(871-938)
scaffold0407 (21-89)||(7335-7402)
[»] scaffold0047 (2 HSPs)
scaffold0047 (9-129)||(11601-11720)
scaffold0047 (21-124)||(11749-11850)
[»] scaffold1300 (2 HSPs)
scaffold1300 (49-124)||(1357-1432)
scaffold1300 (21-125)||(1526-1630)
[»] scaffold0011 (2 HSPs)
scaffold0011 (21-124)||(190178-190281)
scaffold0011 (5-85)||(190338-190418)
[»] scaffold0018 (3 HSPs)
scaffold0018 (40-124)||(72106-72190)
scaffold0018 (49-129)||(71904-71983)
scaffold0018 (46-82)||(71979-72015)
[»] scaffold0039 (2 HSPs)
scaffold0039 (21-124)||(27489-27592)
scaffold0039 (51-124)||(27682-27755)
[»] scaffold0083 (1 HSPs)
scaffold0083 (250-320)||(45944-46014)
[»] scaffold0896 (1 HSPs)
scaffold0896 (275-327)||(3135-3187)
[»] scaffold0154 (1 HSPs)
scaffold0154 (259-316)||(37540-37597)
[»] scaffold0070 (1 HSPs)
scaffold0070 (253-297)||(42925-42969)
[»] scaffold0040 (2 HSPs)
scaffold0040 (259-315)||(53776-53832)
scaffold0040 (267-327)||(58847-58907)
[»] scaffold0007 (1 HSPs)
scaffold0007 (275-327)||(1565-1617)


Alignment Details
Target: chr3 (Bit Score: 98; Significance: 3e-48; HSPs: 89)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 5 - 130
Target Start/End: Complemental strand, 48755446 - 48755321
Alignment:
Q  5 tctgcattcagggactaaattgactaacagagtctacattcattgactattttgcaatttatctgcattcagggactaaagtgacaacttctttcctatt 104  Q
    ||||||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||||||||| |||||||||||| ||| ||||||||||    
T  48755446 tctgcattcagggactaaattgactaacagagtctacattcagggactattttgcaacttatctgcattcagagactaaagtgacgactcctttcctatt 48755347  T
Q  105 cggggactaaagtgactaatctcccc 130  Q
    | ||||||||||||||||||||||||    
T  48755346 cagggactaaagtgactaatctcccc 48755321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 7 - 124
Target Start/End: Original strand, 26498678 - 26498795
Alignment:
Q  7 tgcattcagggactaaattgactaacagagtctacattcattgactattttgcaatttatctgcattcagggactaaagtgacaacttctttcctattcg 106  Q
    ||||||||| |||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||  |||  ||||||||||     
T  26498678 tgcattcagtgactaaattgactaaccgagtctacattcatggactattttgcaatttatctgcattcagggactaaagtgatgactcatttcctattca 26498777  T
Q  107 gggactaaagtgactaat 124  Q
    | ||||||||||||||||    
T  26498778 gagactaaagtgactaat 26498795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 7 - 129
Target Start/End: Complemental strand, 15031305 - 15031183
Alignment:
Q  7 tgcattcagggactaaattgactaacagagtctacattcattgactattttgcaatttatctgcattcagggactaaagtgacaacttctttcctattcg 106  Q
    ||||||||||||||||||||||||||||||||||||||||  ||||||||| ||||||||||||||||| ||||||||||||| |||  ||||| ||||     
T  15031305 tgcattcagggactaaattgactaacagagtctacattcagggactattttacaatttatctgcattcaaggactaaagtgacgactcttttcccattca 15031206  T
Q  107 gggactaaagtgactaatctccc 129  Q
     ||||||||||| ||||||||||    
T  15031205 aggactaaagtggctaatctccc 15031183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 5 - 129
Target Start/End: Complemental strand, 1426603 - 1426479
Alignment:
Q  5 tctgcattcagggactaaattgactaacagagtctacattcattgactattttgcaatttatctgcattcagggactaaagtgacaacttctttcctatt 104  Q
    ||||||||||||||||||||||||||||| | ||||||||||   ||||||||||||||||||||||||||||  |||||||||| |||  |||||||||    
T  1426603 tctgcattcagggactaaattgactaacataatctacattcaggaactattttgcaatttatctgcattcaggatctaaagtgacgactcatttcctatt 1426504  T
Q  105 cggggactaaagtgactaatctccc 129  Q
    | | |||||||||||||||||||||    
T  1426503 cagagactaaagtgactaatctccc 1426479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 8 - 128
Target Start/End: Complemental strand, 21514860 - 21514740
Alignment:
Q  8 gcattcagggactaaattgactaacagagtctacattcattgactattttgcaatttatctgcattcagggactaaagtgacaacttctttcctattcgg 107  Q
    |||||||||||||||||| ||||||||||||||||||||  ||||||||| ||||||||||| ||||||||||||||||||| ||||||||  |||||      
T  21514860 gcattcagggactaaattaactaacagagtctacattcaaggactattttacaatttatctgtattcagggactaaagtgacgacttcttttatattcaa 21514761  T
Q  108 ggactaaagtgactaatctcc 128  Q
     ||||||||||||||||||||    
T  21514760 agactaaagtgactaatctcc 21514740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 7 - 129
Target Start/End: Complemental strand, 33343122 - 33343001
Alignment:
Q  7 tgcattcagggactaaattgactaacagagtctacattcattgactattttgcaatttatctgcattcagggactaaagtgacaacttctttcctattcg 106  Q
    |||||||||||||||| |||||||||| ||||||||||||  ||| |||| |||||||||||||||||||||||||||||||| |||  ||| ||||||     
T  33343122 tgcattcagggactaa-ttgactaacatagtctacattcagggaccatttagcaatttatctgcattcagggactaaagtgacgactcattttctattca 33343024  T
Q  107 gggactaaagtgactaatctccc 129  Q
    |||||||||||||||||||||||    
T  33343023 gggactaaagtgactaatctccc 33343001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 5 - 124
Target Start/End: Original strand, 18445565 - 18445684
Alignment:
Q  5 tctgcattcagggactaaattgactaacagagtctacattcattgactattttgcaatttatctgcattcagggactaaagtgacaacttctttcctatt 104  Q
    |||||||||||  ||||| |||||||||| ||| ||||||||   |||||||||||||||||||||||||| |||||||||||| || ||||||||||||    
T  18445565 tctgcattcagatactaagttgactaacatagtatacattcagaaactattttgcaatttatctgcattcatggactaaagtgataatttctttcctatt 18445664  T
Q  105 cggggactaaagtgactaat 124  Q
    | ||||| ||||||||||||    
T  18445665 cagggaccaaagtgactaat 18445684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 9 - 126
Target Start/End: Complemental strand, 38498250 - 38498133
Alignment:
Q  9 cattcagggactaaattgactaacagagtctacattcattgactattttgcaatttatctgcattcagggactaaagtgacaacttctttcctattcggg 108  Q
    ||||||||||||||||||||||||| ||| || ||| || ||||||||||||||||||||||||||||||||||||||||  |||  ||| |||||| |     
T  38498250 cattcagggactaaattgactaacaaagtttatatttatggactattttgcaatttatctgcattcagggactaaagtgatcactcattttctattcaga 38498151  T
Q  109 gactaaagtgactaatct 126  Q
    ||||||| ||||||||||    
T  38498150 gactaaactgactaatct 38498133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 12 - 131
Target Start/End: Complemental strand, 20759071 - 20758952
Alignment:
Q  12 tcagggactaaattgactaacagagtctacattcattgactattttgcaatttatctgcattcagggactaaagtgacaacttctttcctattcggggac 111  Q
    |||||||||||||||||||| |||||||| |||||  ||||||||| ||||||||||| ||||| ||||||||||||| |||| |||| ||||| | ||     
T  20759071 tcagggactaaattgactaatagagtctatattcagagactattttacaatttatctgtattcaaggactaaagtgacgacttatttcatattcagagat 20758972  T
Q  112 taaagtgactaatctcccct 131  Q
    |||||||| |||||||||||    
T  20758971 taaagtgattaatctcccct 20758952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 17 - 129
Target Start/End: Complemental strand, 44967962 - 44967850
Alignment:
Q  17 gactaaattgactaacagagtctacattcattgactattttgcaatttatctgcattcagggactaaagtgacaacttctttcctattcggggactaaag 116  Q
    ||||||||||||||||||||||||||||||   ||||||||||||| ||| ||||||||||||||||||||||||||  ||| |||||   |||||||||    
T  44967962 gactaaattgactaacagagtctacattcaaaaactattttgcaatatatttgcattcagggactaaagtgacaactcattttctattaaaggactaaag 44967863  T
Q  117 tgactaatctccc 129  Q
    ||||  |||||||    
T  44967862 tgacctatctccc 44967850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 18 - 128
Target Start/End: Complemental strand, 42453149 - 42453039
Alignment:
Q  18 actaaattgactaacagagtctacattcattgactattttgcaatttatctgcattcagggactaaagtgacaacttctttcctattcggggactaaagt 117  Q
    ||||||||||||||||||||||||||| |  |||||||||||||||||| ||||||||  |||||||||||| |||  ||| ||||||  ||| ||||||    
T  42453149 actaaattgactaacagagtctacatttagggactattttgcaatttatttgcattcatagactaaagtgacgactcattttctattcaaggattaaagt 42453050  T
Q  118 gactaatctcc 128  Q
    |||||||||||    
T  42453049 gactaatctcc 42453039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 21 - 124
Target Start/End: Complemental strand, 11989148 - 11989045
Alignment:
Q  21 aaattgactaacagagtctacattcattgactattttgcaatttatctgcattcagggactaaagtgacaacttctttcctattcggggactaaagtgac 120  Q
    |||||||| ||||||||||| |||||  |||| ||||||||||| ||||||||||| |||||||||||| ||||||||||  ||| ||||| ||||||||    
T  11989148 aaattgaccaacagagtctatattcagggactgttttgcaatttctctgcattcagagactaaagtgactacttctttccctttcagggacaaaagtgac 11989049  T
Q  121 taat 124  Q
    ||||    
T  11989048 taat 11989045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 21 - 124
Target Start/End: Complemental strand, 26498651 - 26498548
Alignment:
Q  21 aaattgactaacagagtctacattcattgactattttgcaatttatctgcattcagggactaaagtgacaacttctttcctattcggggactaaagtgac 120  Q
    |||||||| ||||  |||||||||||  |||| ||||||||||| |||||||||||||||||||||||| |||  ||||| |||| ||||||||||||||    
T  26498651 aaattgaccaacatggtctacattcagggactgttttgcaatttctctgcattcagggactaaagtgactactcttttcccattcagggactaaagtgac 26498552  T
Q  121 taat 124  Q
    ||||    
T  26498551 taat 26498548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 21 - 124
Target Start/End: Original strand, 38498279 - 38498382
Alignment:
Q  21 aaattgactaacagagtctacattcattgactattttgcaatttatctgcattcagggactaaagtgacaacttctttcctattcggggactaaagtgac 120  Q
    ||||| ||||||| ||||||||||||  |||||||||||||||| | |||||||||||||||||||||| ||| |||||  |||| |||| |||||||||    
T  38498279 aaattaactaacaaagtctacattcagagactattttgcaatttctatgcattcagggactaaagtgactactcctttctcattcagggattaaagtgac 38498378  T
Q  121 taat 124  Q
    ||||    
T  38498379 taat 38498382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 16 - 129
Target Start/End: Complemental strand, 39541782 - 39541669
Alignment:
Q  16 ggactaaattgactaacagagtctacattcattgactattttgcaatttatctgcattcagggactaaagtgacaacttctttcctattcggggactaaa 115  Q
    |||| ||| ||||||||| | |||| |||||  ||||| |||||||||||||||||||||| |||||||||||| |||  |||||||||| | |||||||    
T  39541782 ggacaaaagtgactaacataatctatattcagggactactttgcaatttatctgcattcagagactaaagtgacgactcatttcctattcagtgactaaa 39541683  T
Q  116 gtgactaatctccc 129  Q
    | ||||||||||||    
T  39541682 gcgactaatctccc 39541669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 21 - 105
Target Start/End: Original strand, 39541786 - 39541870
Alignment:
Q  21 aaattgactaacagagtctacattcattgactattttgcaatttatctgcattcagggactaaagtgacaacttctttcctattc 105  Q
    |||||||| |||||||||||||||||  |||| |||| |||||| |||||||||||||||||||||||| |||||||| ||||||    
T  39541786 aaattgaccaacagagtctacattcagagactgttttacaatttctctgcattcagggactaaagtgactacttcttttctattc 39541870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 5 - 129
Target Start/End: Original strand, 43562760 - 43562884
Alignment:
Q  5 tctgcattcagggactaaattgactaacagagtctacattcattgactattttgcaatttatctgcattcagggactaaagtgacaacttctttcctatt 104  Q
    ||||||||||  || ||||||||| |||||| ||||||||||  ||||||||| ||||||||||||||||||  |||||| |||| | |  |||||||||    
T  43562760 tctgcattcaacgattaaattgacaaacagaatctacattcaaggactattttacaatttatctgcattcagaaactaaaatgacgaatcatttcctatt 43562859  T
Q  105 cggggactaaagtgactaatctccc 129  Q
      ||||||||| |||||||||||||    
T  43562860 gagggactaaaatgactaatctccc 43562884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 21 - 124
Target Start/End: Original strand, 20759103 - 20759206
Alignment:
Q  21 aaattgactaacagagtctacattcattgactattttgcaatttatctgcattcagggactaaagtgacaacttctttcctattcggggactaaagtgac 120  Q
    ||||||||||||| ||||||||||||  |||||||||||||||| |||||||||| |||||||| |||| ||| |||||  |||| |||||||||  |||    
T  20759103 aaattgactaacaaagtctacattcaaggactattttgcaatttctctgcattcaaggactaaaatgactactcctttctcattcagggactaaaacgac 20759202  T
Q  121 taat 124  Q
    ||||    
T  20759203 taat 20759206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 7 - 59
Target Start/End: Original strand, 14434802 - 14434854
Alignment:
Q  7 tgcattcagggactaaattgactaacagagtctacattcattgactattttgc 59  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  14434802 tgcattcagggactaaattgactaacagagtctacattcatggactattttgc 14434854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 21 - 124
Target Start/End: Original strand, 15031396 - 15031499
Alignment:
Q  21 aaattgactaacagagtctacattcattgactattttgcaatttatctgcattcagggactaaagtgacaacttctttcctattcggggactaaagtgac 120  Q
    |||||||| |||| |||||| ||| |  |||| ||||||||||| ||||||||||| |||||||||||| |||  ||||| |||| ||||||||||||||    
T  15031396 aaattgaccaacaaagtctagatttagggactgttttgcaatttctctgcattcagagactaaagtgactactcatttcccattcagggactaaagtgac 15031495  T
Q  121 taat 124  Q
    ||||    
T  15031496 taat 15031499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 89
Target Start/End: Original strand, 11989205 - 11989289
Alignment:
Q  5 tctgcattcagggactaaattgactaacagagtctacattcattgactattttgcaatttatctgcattcagggactaaagtgac 89  Q
    ||||||||||||||||| ||||||||||||||||||||   |  |||||||||||||||||||| ||| ||| ||||||| ||||    
T  11989205 tctgcattcagggactagattgactaacagagtctacaactagagactattttgcaatttatctacatgcagagactaaaatgac 11989289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 21 - 125
Target Start/End: Complemental strand, 41985008 - 41984904
Alignment:
Q  21 aaattgactaacagagtctacattcattgactattttgcaatttatctgcattcagggactaaagtgacaacttctttcctattcggggactaaagtgac 120  Q
    ||||||||||||||||||||| ||||   ||| ||||||||||| |||||||||| | ||| ||||||| |||  |||| ||||| || |||||||||||    
T  41985008 aaattgactaacagagtctacgttcaagcactgttttgcaatttctctgcattcaagtacttaagtgactactcttttcttattcaggaactaaagtgac 41984909  T
Q  121 taatc 125  Q
    |||||    
T  41984908 taatc 41984904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 21 - 89
Target Start/End: Original strand, 48755504 - 48755572
Alignment:
Q  21 aaattgactaacagagtctacattcattgactattttgcaatttatctgcattcagggactaaagtgac 89  Q
    |||||||| |||||||||||||||||   ||| ||||||||||| ||||||||||||||||||||||||    
T  48755504 aaattgaccaacagagtctacattcaggaactgttttgcaatttctctgcattcagggactaaagtgac 48755572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 21 - 89
Target Start/End: Original strand, 1426651 - 1426719
Alignment:
Q  21 aaattgactaacagagtctacattcattgactattttgcaatttatctgcattcagggactaaagtgac 89  Q
    |||||||| |||| |||||||||||| ||||| ||||||||||| |||||||||||||| |||| ||||    
T  1426651 aaattgaccaacaaagtctacattcagtgactgttttgcaatttctctgcattcagggattaaaatgac 1426719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 15005077 - 15005025
Alignment:
Q  5 tctgcattcagggactaaattgactaacagagtctacattcattgactatttt 57  Q
    |||||||||||||| |||||||||||||||||||||||||||  |||||||||    
T  15005077 tctgcattcagggattaaattgactaacagagtctacattcaaggactatttt 15005025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 21 - 125
Target Start/End: Complemental strand, 18445508 - 18445404
Alignment:
Q  21 aaattgactaacagagtctacattcattgactattttgcaatttatctgcattcagggactaaagtgacaacttctttcctattcggggactaaagtgac 120  Q
    ||||||||||||||||||||| ||||   ||| ||||||||||| |||||||||| | ||| ||||||| |||  ||||  |||| || |||||||||||    
T  18445508 aaattgactaacagagtctacgttcaagcactgttttgcaatttctctgcattcaagtacttaagtgactactcttttctgattcaggaactaaagtgac 18445409  T
Q  121 taatc 125  Q
    |||||    
T  18445408 taatc 18445404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 259 - 327
Target Start/End: Original strand, 48315023 - 48315091
Alignment:
Q  259 gggattcgaacctcgtaccttgcatatattatgcattatctttaccaacttagctaagttcatgaggac 327  Q
    |||||| ||||| || |||||||||||||||||||||||| ||||||||| ||||||| ||| ||||||    
T  48315023 gggatttgaaccccggaccttgcatatattatgcattatccttaccaactgagctaagctcacgaggac 48315091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 259 - 327
Target Start/End: Complemental strand, 48376897 - 48376829
Alignment:
Q  259 gggattcgaacctcgtaccttgcatatattatgcattatctttaccaacttagctaagttcatgaggac 327  Q
    |||||||||||| |  ||||| |||||||||||||||||||||||||||| ||||||| ||| ||||||    
T  48376897 gggattcgaaccccaaaccttacatatattatgcattatctttaccaactgagctaagctcacgaggac 48376829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 21 - 124
Target Start/End: Original strand, 21514920 - 21515023
Alignment:
Q  21 aaattgactaacagagtctacattcattgactattttgcaatttatctgcattcagggactaaagtgacaacttctttcctattcggggactaaagtgac 120  Q
    |||||||| || | ||||||||||||  |||| ||||| ||||||||| |||||| |||||||| |||| |||  ||||| |||| ||||| ||||||||    
T  21514920 aaattgaccaatatagtctacattcagggactgttttgaaatttatctacattcaaggactaaaatgactactcatttccaattcagggacaaaagtgac 21515019  T
Q  121 taat 124  Q
    ||||    
T  21515020 taat 21515023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 262 - 308
Target Start/End: Complemental strand, 10440743 - 10440697
Alignment:
Q  262 attcgaacctcgtaccttgcatatattatgcattatctttaccaact 308  Q
    |||||||||||||||||||||||||||||||||| ||| ||||||||    
T  10440743 attcgaacctcgtaccttgcatatattatgcattgtctctaccaact 10440697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 267 - 327
Target Start/End: Original strand, 2105705 - 2105765
Alignment:
Q  267 aacctcgtaccttgcatatattatgcattatctttaccaacttagctaagttcatgaggac 327  Q
    ||||||| |||||||||||||||| |||||| |||||||||| || |||||||| ||||||    
T  2105705 aacctcggaccttgcatatattatacattatttttaccaactgagttaagttcacgaggac 2105765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 21 - 89
Target Start/End: Original strand, 15005134 - 15005202
Alignment:
Q  21 aaattgactaacagagtctacattcattgactattttgcaatttatctgcattcagggactaaagtgac 89  Q
    ||||||||  ||||||||||||||||   ||| ||||||||||| ||||||||||| ||||||||||||    
T  15005134 aaattgaccgacagagtctacattcagaaactgttttgcaatttctctgcattcagagactaaagtgac 15005202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 253 - 316
Target Start/End: Original strand, 13042793 - 13042856
Alignment:
Q  253 gtgtttgggattcgaacctcgtaccttgcatatattatgcattatctttaccaacttagctaag 316  Q
    ||||||||| |||||||| || ||||||||||||||||  ||| |||||||||||| |||||||    
T  13042793 gtgtttggggttcgaaccccggaccttgcatatattataaattgtctttaccaactgagctaag 13042856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 253 - 316
Target Start/End: Original strand, 13050870 - 13050933
Alignment:
Q  253 gtgtttgggattcgaacctcgtaccttgcatatattatgcattatctttaccaacttagctaag 316  Q
    ||||||||| |||||||| || ||||||||||||||||  ||| |||||||||||| |||||||    
T  13050870 gtgtttggggttcgaaccccggaccttgcatatattataaattgtctttaccaactgagctaag 13050933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 21 - 124
Target Start/End: Original strand, 33343180 - 33343283
Alignment:
Q  21 aaattgactaacagagtctacattcattgactattttgcaatttatctgcattcagggactaaagtgacaacttctttcctattcggggactaaagtgac 120  Q
    |||||||| |||||||| || |||||  |||| ||||||||||| |||||||||||  |||||| || | |||  ||||| |||| |||| |||||||||    
T  33343180 aaattgaccaacagagtttatattcaaggactgttttgcaatttctctgcattcagtaactaaaatgtctactcatttcccattcagggattaaagtgac 33343279  T
Q  121 taat 124  Q
    ||||    
T  33343280 taat 33343283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 259 - 318
Target Start/End: Complemental strand, 35492855 - 35492796
Alignment:
Q  259 gggattcgaacctcgtaccttgcatatattatgcattatctttaccaacttagctaagtt 318  Q
    ||||||||||||||| || |||||||||||||||||| |  ||||||||| |||||||||    
T  35492855 gggattcgaacctcgaactttgcatatattatgcattgttcttaccaactgagctaagtt 35492796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 123
Target Start/End: Complemental strand, 14434743 - 14434641
Alignment:
Q  21 aaattgactaacagagtctacattcattgactattttgcaatttatctgcattcagggactaaagtgacaacttctttcctattcggggactaaagtgac 120  Q
    ||||| ||||||| ||||||||||||  |||| ||||||||| | |||||||| | ||||||||||||| | |  ||||| ||||  ||| |||||||||    
T  14434743 aaattaactaacaaagtctacattcaaggactgttttgcaatatctctgcatttacggactaaagtgactattcatttcccattcatggattaaagtgac 14434644  T
Q  121 taa 123  Q
    |||    
T  14434643 taa 14434641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 253 - 327
Target Start/End: Original strand, 21914064 - 21914138
Alignment:
Q  253 gtgtttgggattcgaacctcgtaccttgcatatattatgcattatctttaccaacttagctaagttcatgaggac 327  Q
    ||||| ||| |||||||| | |||||||||||||||||||||| || ||||||||| || |||| ||||| ||||    
T  21914064 gtgttaggggttcgaaccccataccttgcatatattatgcattgtccttaccaactgagttaagctcatggggac 21914138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 253 - 327
Target Start/End: Complemental strand, 45096094 - 45096020
Alignment:
Q  253 gtgtttgggattcgaacctcgtaccttgcatatattatgcattatctttaccaacttagctaagttcatgaggac 327  Q
    |||| |||| |||||||| |  ||||||||||||||||||||| || ||| ||||| ||||||||||||| ||||    
T  45096094 gtgtctggggttcgaaccacagaccttgcatatattatgcattgtccttatcaactgagctaagttcatggggac 45096020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 259 - 316
Target Start/End: Original strand, 8113561 - 8113618
Alignment:
Q  259 gggattcgaacctcgtaccttgcatatattatgcattatctttaccaacttagctaag 316  Q
    |||||||||||| || | ||||||||||||||||||| || ||||||||| |||||||    
T  8113561 gggattcgaaccgcggatcttgcatatattatgcattgtccttaccaactgagctaag 8113618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 40 - 129
Target Start/End: Complemental strand, 33412288 - 33412199
Alignment:
Q  40 acattcattgactattttgcaatttatctgcattcagggactaaagtgacaacttctttcctattcggggactaaagtgactaatctccc 129  Q
    |||||||  ||||||||| ||||||||||||||||   || ||||||||| | |  ||||||||||   |||||||||||||||||||||    
T  33412288 acattcaaggactattttacaatttatctgcattcgaagattaaagtgacgattcatttcctattcaaagactaaagtgactaatctccc 33412199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 263 - 316
Target Start/End: Complemental strand, 52119434 - 52119381
Alignment:
Q  263 ttcgaacctcgtaccttgcatatattatgcattatctttaccaacttagctaag 316  Q
    |||||||| || ||||||||||||||||||||| || ||||||||| |||||||    
T  52119434 ttcgaaccccgaaccttgcatatattatgcattgtccttaccaactgagctaag 52119381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 262 - 327
Target Start/End: Original strand, 53633619 - 53633684
Alignment:
Q  262 attcgaacctcgtaccttgcatatattatgcattatctttaccaacttagctaagttcatgaggac 327  Q
    ||||||||| || ||||| |||||||||||||||||| ||||||||| || |||| ||| ||||||    
T  53633619 attcgaaccccggaccttacatatattatgcattatccttaccaactgagttaagctcacgaggac 53633684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 275 - 308
Target Start/End: Complemental strand, 54584079 - 54584046
Alignment:
Q  275 accttgcatatattatgcattatctttaccaact 308  Q
    ||||||||||||||||||||||||||||||||||    
T  54584079 accttgcatatattatgcattatctttaccaact 54584046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 275 - 327
Target Start/End: Original strand, 1149084 - 1149136
Alignment:
Q  275 accttgcatatattatgcattatctttaccaacttagctaagttcatgaggac 327  Q
    ||||||||||||||||||||| || ||||||||| ||||||| ||| ||||||    
T  1149084 accttgcatatattatgcattgtccttaccaactgagctaagctcacgaggac 1149136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 275 - 339
Target Start/End: Complemental strand, 2078286 - 2078222
Alignment:
Q  275 accttgcatatattatgcattatctttaccaacttagctaagttcatgaggacgttcaaatggtt 339  Q
    ||||||||||||||||||||| ||| |||||||| || |||||||| ||| || |||||| ||||    
T  2078286 accttgcatatattatgcattgtctctaccaactgagttaagttcacgagaactttcaaacggtt 2078222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 275 - 315
Target Start/End: Complemental strand, 2662138 - 2662098
Alignment:
Q  275 accttgcatatattatgcattatctttaccaacttagctaa 315  Q
    ||||||||||||||||||||| |||||||||||| ||||||    
T  2662138 accttgcatatattatgcattgtctttaccaactgagctaa 2662098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 275 - 327
Target Start/End: Original strand, 4216414 - 4216466
Alignment:
Q  275 accttgcatatattatgcattatctttaccaacttagctaagttcatgaggac 327  Q
    ||||||||||||||||||||| || ||| ||||| ||||||||||| ||||||    
T  4216414 accttgcatatattatgcattgtccttatcaactgagctaagttcacgaggac 4216466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 53
Target Start/End: Complemental strand, 15031367 - 15031323
Alignment:
Q  9 cattcagggactaaattgactaacagagtctacattcattgacta 53  Q
    ||||||| |||||||||||||||| ||||||||||||| ||||||    
T  15031367 cattcagtgactaaattgactaacggagtctacattcagtgacta 15031323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 275 - 327
Target Start/End: Original strand, 16980369 - 16980421
Alignment:
Q  275 accttgcatatattatgcattatctttaccaacttagctaagttcatgaggac 327  Q
    ||||||||||||||||||||| || ||||||||| ||||||| ||| ||||||    
T  16980369 accttgcatatattatgcattgtccttaccaactgagctaagctcacgaggac 16980421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 275 - 327
Target Start/End: Complemental strand, 29631232 - 29631180
Alignment:
Q  275 accttgcatatattatgcattatctttaccaacttagctaagttcatgaggac 327  Q
    ||||||||||||||||||||| ||  |||||||| ||||||| ||||||||||    
T  29631232 accttgcatatattatgcattgtccataccaactgagctaagctcatgaggac 29631180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 89
Target Start/End: Original strand, 44968031 - 44968098
Alignment:
Q  21 aaattgactaacagagtctacattcattgactattttgcaatttatctgcattcagggactaaagtgac 89  Q
    |||||||| |||| |||||||||| |  |||| ||||||||||||||| |||||| |||||||||||||    
T  44968031 aaattgaccaacaaagtctacatttagggactgttttgcaatttatctacattca-ggactaaagtgac 44968098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 307
Target Start/End: Complemental strand, 51614271 - 51614223
Alignment:
Q  259 gggattcgaacctcgtaccttgcatatattatgcattatctttaccaac 307  Q
    ||||||||||||||| |||||||||||||| ||||||||  ||||||||    
T  51614271 gggattcgaacctcggaccttgcatatattttgcattattcttaccaac 51614223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 9 - 128
Target Start/End: Complemental strand, 26920270 - 26920152
Alignment:
Q  9 cattcagggactaaattgactaacagagtctacattcattgactattttgcaatttatctgcattcagggactaaagtgacaacttctttcctattcggg 108  Q
    |||| ||| |||||||| ||||| |||||||| ||| |  |||||||||||||||||| |  ||||| |||||||||| | ||||  ||| |||||   |    
T  26920270 cattgaggaactaaattaactaatagagtctatatttagagactattttgcaatttatttagattcatggactaaagttataactcatttgctatt-aag 26920172  T
Q  109 gactaaagtgactaatctcc 128  Q
    ||||||||||| ||||||||    
T  26920171 gactaaagtgattaatctcc 26920152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 253 - 316
Target Start/End: Original strand, 35191810 - 35191873
Alignment:
Q  253 gtgtttgggattcgaacctcgtaccttgcatatattatgcattatctttaccaacttagctaag 316  Q
    |||| |||| |||||||| |  ||||||||||||||||||||| || ||||||||| |||||||    
T  35191810 gtgtctggggttcgaaccccagaccttgcatatattatgcattgtccttaccaactgagctaag 35191873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 263 - 322
Target Start/End: Original strand, 38869521 - 38869580
Alignment:
Q  263 ttcgaacctcgtaccttgcatatattatgcattatctttaccaacttagctaagttcatg 322  Q
    ||||||||||| | |||| |||||||||||||| |  ||||||||| |||||||||||||    
T  38869521 ttcgaacctcggatcttgtatatattatgcattgttcttaccaactgagctaagttcatg 38869580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 261 - 308
Target Start/End: Original strand, 39869808 - 39869855
Alignment:
Q  261 gattcgaacctcgtaccttgcatatattatgcattatctttaccaact 308  Q
    ||||||||||||| |||||| |||||||||||||| || |||||||||    
T  39869808 gattcgaacctcggaccttgtatatattatgcattgtccttaccaact 39869855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 257 - 316
Target Start/End: Original strand, 47099032 - 47099091
Alignment:
Q  257 ttgggattcgaacctcgtaccttgcatatattatgcattatctttaccaacttagctaag 316  Q
    |||||||| ||||| || |||||||||||||||||||||||  ||| ||||| |||||||    
T  47099032 ttgggatttgaaccccgaaccttgcatatattatgcattattcttatcaactgagctaag 47099091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 266 - 316
Target Start/End: Complemental strand, 10926524 - 10926474
Alignment:
Q  266 gaacctcgtaccttgcatatattatgcattatctttaccaacttagctaag 316  Q
    ||||| || ||||||||||||||||||||| || ||||||||| |||||||    
T  10926524 gaaccccgaaccttgcatatattatgcattgtccttaccaactgagctaag 10926474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 262 - 308
Target Start/End: Original strand, 11969652 - 11969698
Alignment:
Q  262 attcgaacctcgtaccttgcatatattatgcattatctttaccaact 308  Q
    |||||||||||| ||||||||| ||||||||||| || |||||||||    
T  11969652 attcgaacctcggaccttgcatgtattatgcattttccttaccaact 11969698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 259 - 297
Target Start/End: Complemental strand, 14771393 - 14771355
Alignment:
Q  259 gggattcgaacctcgtaccttgcatatattatgcattat 297  Q
    ||||||||||||||  |||||||||||||||||||||||    
T  14771393 gggattcgaacctcagaccttgcatatattatgcattat 14771355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 53
Target Start/End: Complemental strand, 15031397 - 15031355
Alignment:
Q  11 ttcagggactaaattgactaacagagtctacattcattgacta 53  Q
    ||||||||||||| |||||||| ||||||||||||| ||||||    
T  15031397 ttcagggactaaagtgactaacggagtctacattcagtgacta 15031355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 273 - 327
Target Start/End: Complemental strand, 19745408 - 19745354
Alignment:
Q  273 gtaccttgcatatattatgcattatctttaccaacttagctaagttcatgaggac 327  Q
    ||||||||||||| ||||||||| ||||||| |||| ||||||| ||| ||||||    
T  19745408 gtaccttgcatattttatgcattctctttactaactcagctaagctcaagaggac 19745354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 261 - 327
Target Start/End: Original strand, 21331418 - 21331484
Alignment:
Q  261 gattcgaacctcgtaccttgcatatattatgcattatctttaccaacttagctaagttcatgaggac 327  Q
    |||||||||| || ||||||||||||||||||||| ||  || ||||| ||||||| ||| ||||||    
T  21331418 gattcgaaccccgaaccttgcatatattatgcattgtccataacaactgagctaagctcacgaggac 21331484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 258 - 316
Target Start/End: Complemental strand, 21513351 - 21513293
Alignment:
Q  258 tgggattcgaacctcgtaccttgcatatattatgcattatctttaccaacttagctaag 316  Q
    ||||||||||||| |  |||||||||| |||||||||| || ||||||||| |||||||    
T  21513351 tgggattcgaaccccagaccttgcataaattatgcattgtccttaccaactgagctaag 21513293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 77
Target Start/End: Complemental strand, 26840095 - 26840038
Alignment:
Q  17 gactaaattgactaacagagtctacattcattgactattttgcaatttatctgcattcagg 77  Q
    ||||||||||||||   |||||||||||||  |||||||||| ||||||||| ||||||||    
T  26840095 gactaaattgacta---gagtctacattcaaagactattttgtaatttatctacattcagg 26840038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 253 - 291
Target Start/End: Original strand, 41990577 - 41990615
Alignment:
Q  253 gtgtttgggattcgaacctcgtaccttgcatatattatg 291  Q
    ||||||||| ||||||||||| |||||||||||||||||    
T  41990577 gtgtttggggttcgaacctcggaccttgcatatattatg 41990615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 266 - 308
Target Start/End: Original strand, 48417873 - 48417915
Alignment:
Q  266 gaacctcgtaccttgcatatattatgcattatctttaccaact 308  Q
    |||| ||| ||||||||||||||||||||||| ||||||||||    
T  48417873 gaacttcgaaccttgcatatattatgcattatatttaccaact 48417915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 275 - 321
Target Start/End: Original strand, 50570204 - 50570250
Alignment:
Q  275 accttgcatatattatgcattatctttaccaacttagctaagttcat 321  Q
    ||||||||||||||||||||| ||| |||||||| ||||||| ||||    
T  50570204 accttgcatatattatgcattgtctataccaactgagctaagctcat 50570250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 263 - 316
Target Start/End: Original strand, 5702181 - 5702233
Alignment:
Q  263 ttcgaacctcgtaccttgcatatattatgcattatctttaccaacttagctaag 316  Q
    ||||||||||  ||||||||||||||||||||| || ||||||||| |||||||    
T  5702181 ttcgaacctcaaaccttgcatatattatgcattgtc-ttaccaactgagctaag 5702233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 263 - 308
Target Start/End: Original strand, 7859495 - 7859540
Alignment:
Q  263 ttcgaacctcgtaccttgcatatattatgcattatctttaccaact 308  Q
    |||||||| || ||||| ||||||||||||||||||| ||||||||    
T  7859495 ttcgaaccccgaaccttacatatattatgcattatctataccaact 7859540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 259 - 308
Target Start/End: Original strand, 15507270 - 15507319
Alignment:
Q  259 gggattcgaacctcgtaccttgcatatattatgcattatctttaccaact 308  Q
    ||||||||||||||  ||||| |||||||||||||||| |||||| ||||    
T  15507270 gggattcgaacctcagaccttacatatattatgcattacctttactaact 15507319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 320
Target Start/End: Original strand, 25441515 - 25441560
Alignment:
Q  275 accttgcatatattatgcattatctttaccaacttagctaagttca 320  Q
    ||||||||||||||||||||| ||  |||||||| |||||||||||    
T  25441515 accttgcatatattatgcattgtccataccaactgagctaagttca 25441560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 263 - 316
Target Start/End: Complemental strand, 30200884 - 30200831
Alignment:
Q  263 ttcgaacctcgtaccttgcatatattatgcattatctttaccaacttagctaag 316  Q
    ||||||||||  ||||||||||||||||||||| || ||| ||||| |||||||    
T  30200884 ttcgaacctcaaaccttgcatatattatgcattgtccttagcaactgagctaag 30200831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 320
Target Start/End: Complemental strand, 31214680 - 31214635
Alignment:
Q  275 accttgcatatattatgcattatctttaccaacttagctaagttca 320  Q
    ||||| ||||||||||||||||| | |||||||||| |||||||||    
T  31214680 accttacatatattatgcattatttctaccaacttaactaagttca 31214635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 270 - 327
Target Start/End: Complemental strand, 33223919 - 33223862
Alignment:
Q  270 ctcgtaccttgcatatattatgcattatctttaccaacttagctaagttcatgaggac 327  Q
    |||| ||||||||||||||||||||| | | |||||||| ||||||| ||| ||||||    
T  33223919 ctcgaaccttgcatatattatgcattgtttctaccaactgagctaagctcacgaggac 33223862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 259 - 316
Target Start/End: Complemental strand, 46469338 - 46469282
Alignment:
Q  259 gggattcgaacctcgtaccttgcatatattatgcattatctttaccaacttagctaag 316  Q
    |||||||||||| || |||||| |||||||||||||| || ||||||||| |||||||    
T  46469338 gggattcgaaccccg-accttgaatatattatgcattgtccttaccaactgagctaag 46469282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 259 - 316
Target Start/End: Complemental strand, 53996361 - 53996304
Alignment:
Q  259 gggattcgaacctcgtaccttgcatatattatgcattatctttaccaacttagctaag 316  Q
    |||||||||||| |  ||||||||||||||||||||| ||  |||||||| |||||||    
T  53996361 gggattcgaaccccagaccttgcatatattatgcattgtccataccaactgagctaag 53996304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 262 - 326
Target Start/End: Complemental strand, 8139774 - 8139710
Alignment:
Q  262 attcgaacctcgtaccttgcatatattatgcattatctttaccaacttagctaagttcatgagga 326  Q
    |||||||||||  ||||||||||||||||||||| ||  |||||||| | ||||| ||| |||||    
T  8139774 attcgaacctcagaccttgcatatattatgcattgtccataccaactaaactaagctcacgagga 8139710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 275 - 327
Target Start/End: Original strand, 10498710 - 10498762
Alignment:
Q  275 accttgcatatattatgcattatctttaccaacttagctaagttcatgaggac 327  Q
    ||||||||||||||||||||| ||  |||||||| ||||||| ||| ||||||    
T  10498710 accttgcatatattatgcattgtccataccaactgagctaagctcacgaggac 10498762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 259 - 326
Target Start/End: Original strand, 12043095 - 12043163
Alignment:
Q  259 gggattcgaacctcgtaccttgcatatatt-atgcattatctttaccaacttagctaagttcatgagga 326  Q
    |||||| |||||||| |||||||||||||| ||||||| || ||||||||| || |||| ||| |||||    
T  12043095 gggatttgaacctcgaaccttgcatatattaatgcattgtccttaccaactgagttaagctcacgagga 12043163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 275 - 327
Target Start/End: Original strand, 16792989 - 16793041
Alignment:
Q  275 accttgcatatattatgcattatctttaccaacttagctaagttcatgaggac 327  Q
    ||||||||||||||||||||| ||| ||||||||  |||||| ||| ||||||    
T  16792989 accttgcatatattatgcattgtctataccaactgtgctaagctcacgaggac 16793041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 275 - 327
Target Start/End: Original strand, 18870740 - 18870792
Alignment:
Q  275 accttgcatatattatgcattatctttaccaacttagctaagttcatgaggac 327  Q
    ||||||||||||||||||||| ||  |||||||| ||||||| ||| ||||||    
T  18870740 accttgcatatattatgcattgtccctaccaactgagctaagctcacgaggac 18870792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 260 - 308
Target Start/End: Complemental strand, 19468512 - 19468464
Alignment:
Q  260 ggattcgaacctcgtaccttgcatatattatgcattatctttaccaact 308  Q
    ||||||||||| || ||||||||||||||||||||| ||  ||||||||    
T  19468512 ggattcgaaccacggaccttgcatatattatgcattgtccataccaact 19468464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 275 - 323
Target Start/End: Complemental strand, 25902826 - 25902778
Alignment:
Q  275 accttgcatatattatgcattatctttaccaacttagctaagttcatga 323  Q
    |||||||||||||||| ||||||| ||||||||  ||||||| ||||||    
T  25902826 accttgcatatattatacattatccttaccaaccaagctaagctcatga 25902778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 129
Target Start/End: Original strand, 26920331 - 26920439
Alignment:
Q  21 aaattgactaacagagtctacattcattgactattttgcaatttatctgcattcagggactaaagtgacaacttctttcctattcggggactaaagtgac 120  Q
    |||||||  |||| ||| ||||||||   ||| ||||||||||| ||||||||||  ||||||||| || ||| |||| |||||| || | |||||| ||    
T  26920331 aaattgatcaacaaagtatacattcaagaactgttttgcaatttttctgcattcatagactaaagtaactactacttttctattcaggaattaaagtcac 26920430  T
Q  121 taatctccc 129  Q
    |||| ||||    
T  26920431 taatttccc 26920439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 275 - 319
Target Start/End: Original strand, 28694003 - 28694047
Alignment:
Q  275 accttgcatatattatgcattatctttaccaacttagctaagttc 319  Q
    |||||||||||||||||||||  |||||||||| ||| |||||||    
T  28694003 accttgcatatattatgcattgcctttaccaacatagttaagttc 28694047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 263 - 327
Target Start/End: Complemental strand, 44579694 - 44579630
Alignment:
Q  263 ttcgaacctcgtaccttgcatatattatgcattatctttaccaacttagctaagttcatgaggac 327  Q
    |||||||| || ||||||||||| ||||||||| ||  |||||||| ||||||| ||| ||||||    
T  44579694 ttcgaaccccggaccttgcatattttatgcattgtccataccaactgagctaagctcacgaggac 44579630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 275 - 315
Target Start/End: Original strand, 54230114 - 54230154
Alignment:
Q  275 accttgcatatattatgcattatctttaccaacttagctaa 315  Q
    ||||||||||||||||||||| || ||||||||| ||||||    
T  54230114 accttgcatatattatgcattgtccttaccaactgagctaa 54230154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 97; Significance: 1e-47; HSPs: 72)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 5 - 129
Target Start/End: Complemental strand, 50335560 - 50335436
Alignment:
Q  5 tctgcattcagggactaaattgactaacagagtctacattcattgactattttgcaatttatctgcattcagggactaaagtgacaacttctttcctatt 104  Q
    ||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||  |||||||||    
T  50335560 tctgcattcagggactaaattgactaacaaagtctacattcatggactattttgcaatttatctgcattcagggactaaagtgacgactcatttcctatt 50335461  T
Q  105 cggggactaaagtgactaatctccc 129  Q
    | |||| ||||||||||||||||||    
T  50335460 cagggattaaagtgactaatctccc 50335436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 5 - 129
Target Start/End: Complemental strand, 37608091 - 37607968
Alignment:
Q  5 tctgcattcagggactaaattgactaacagagtctacattcattgactattttgcaatttatctgcattcagggactaaagtgacaacttctttcctatt 104  Q
    |||||||||| |||||||||||||||||||||||||||||||  |||||||||||||||||| ||||||||||||||||| |||||| |  |||||||||    
T  37608091 tctgcattcaaggactaaattgactaacagagtctacattcaaggactattttgcaatttatatgcattcagggactaaaatgacaattcatttcctatt 37607992  T
Q  105 cggggactaaagtgactaatctccc 129  Q
    | |||||| |||| |||||||||||    
T  37607991 cagggact-aagttactaatctccc 37607968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 5 - 104
Target Start/End: Complemental strand, 13735564 - 13735465
Alignment:
Q  5 tctgcattcagggactaaattgactaacagagtctacattcattgactattttgcaatttatctgcattcagggactaaagtgacaacttctttcctatt 104  Q
    ||||||||||| ||||||||||||||||||||||||||||    |||||||||| |||||||||||||||||||||||||||||| ||||||||||||||    
T  13735564 tctgcattcagagactaaattgactaacagagtctacattgtgggactattttgtaatttatctgcattcagggactaaagtgacgacttctttcctatt 13735465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 10 - 119
Target Start/End: Original strand, 8097880 - 8097989
Alignment:
Q  10 attcagggactaaattgactaacagagtctacattcattgactattttgcaatttatctgcattcagggactaaagtgacaacttctttcctattcgggg 109  Q
    ||||| |||||||||||||||||||| |||| |||||| ||||||||||  |||||||||||||||||||||||||||| ||||  |||||||||  |||    
T  8097880 attcaaggactaaattgactaacagaatctatattcatggactattttgtgatttatctgcattcagggactaaagtgaaaactcatttcctatttaggg 8097979  T
Q  110 actaaagtga 119  Q
    ||||||||||    
T  8097980 actaaagtga 8097989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 21 - 124
Target Start/End: Original strand, 50335617 - 50335720
Alignment:
Q  21 aaattgactaacagagtctacattcattgactattttgcaatttatctgcattcagggactaaagtgacaacttctttcctattcggggactaaagtgac 120  Q
    |||||||| |||||||||||||||||  |||| ||||||||||| |||||||||||||| ||||||||| |||| ||| | |||| ||||||||||||||    
T  50335617 aaattgaccaacagagtctacattcagggactgttttgcaatttgtctgcattcagggattaaagtgactactttttttccattctgggactaaagtgac 50335716  T
Q  121 taat 124  Q
    ||||    
T  50335717 taat 50335720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 11 - 129
Target Start/End: Complemental strand, 11633307 - 11633189
Alignment:
Q  11 ttcagggactaaattgactaacagagtctacattcattgactattttgcaatttatctgcattcagggactaaagtgacaacttctttcctattcgggga 110  Q
    |||| |||||||| ||||||||| | |||||||||||  |||||||| |||||||||||| |||| | || |||||||| |||||||||||||||  |||    
T  11633307 ttcaaggactaaagtgactaacataatctacattcatgaactattttacaatttatctgctttcaagaaccaaagtgacgacttctttcctattcatgga 11633208  T
Q  111 ctaaagtgactaatctccc 129  Q
     ||||||||||||||||||    
T  11633207 ttaaagtgactaatctccc 11633189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 25 - 124
Target Start/End: Original strand, 42847198 - 42847297
Alignment:
Q  25 tgactaacagagtctacattcattgactattttgcaatttatctgcattcagggactaaagtgacaacttctttcctattcggggactaaagtgactaat 124  Q
    ||||||||| ||||||||||||  || | ||||||||||| |||||||||||||| ||||||||| |||| |||||||| | | ||||||||||||||||    
T  42847198 tgactaacaaagtctacattcaaggattgttttgcaatttctctgcattcagggaataaagtgactacttttttcctatccagagactaaagtgactaat 42847297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 21 - 124
Target Start/End: Complemental strand, 32374088 - 32373986
Alignment:
Q  21 aaattgactaacagagtctacattcattgactattttgcaatttatctgcattcagggactaaagtgacaacttctttcctattcggggactaaagtgac 120  Q
    ||||||||||||| ||||||||||||   ||| |||||||| || | ||||| |||||||||||||||| || |||||||||||| ||||||||| ||||    
T  32374088 aaattgactaacacagtctacattcaagaactgttttgcaaattctatgcatccagggactaaagtgactac-tctttcctattcagggactaaaatgac 32373990  T
Q  121 taat 124  Q
    ||||    
T  32373989 taat 32373986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 7 - 89
Target Start/End: Original strand, 32374128 - 32374203
Alignment:
Q  7 tgcattcagggactaaattgactaacagagtctacattcattgactattttgcaatttatctgcattcagggactaaagtgac 89  Q
    |||||||||||||||||||||||||       ||||||||| |||||||||||||||||| |||||| |||||||||||||||    
T  32374128 tgcattcagggactaaattgactaa-------tacattcatggactattttgcaatttatttgcatttagggactaaagtgac 32374203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 39 - 123
Target Start/End: Original strand, 37608165 - 37608249
Alignment:
Q  39 tacattcattgactattttgcaatttatctgcattcagggactaaagtgacaacttctttcctattcggggactaaagtgactaa 123  Q
    ||||||||  |||| ||||||||||| ||||||||||||||||||| |||| ||| |||||| ||||  ||||||||||||||||    
T  37608165 tacattcagggactgttttgcaatttctctgcattcagggactaaaatgactactcctttcccattcaaggactaaagtgactaa 37608249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 7 - 127
Target Start/End: Complemental strand, 42847144 - 42847022
Alignment:
Q  7 tgcattcagggactaaattgactaacagag--tctacattcattgactattttgcaatttatctgcattcagggactaaagtgacaacttctttcctatt 104  Q
    |||||||||  ||||||||||||| || |   ||||||||||  || |||||| ||||||||||||||| | |||||||| |||  ||||||||| ||||    
T  42847144 tgcattcagatactaaattgactatcatataatctacattcaaagattatttttcaatttatctgcatttatggactaaaatgaggacttctttcttatt 42847045  T
Q  105 cggggactaaagtgactaatctc 127  Q
    |  ||||||||||||||||||||    
T  42847044 caaggactaaagtgactaatctc 42847022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 259 - 329
Target Start/End: Original strand, 38448865 - 38448935
Alignment:
Q  259 gggattcgaacctcgtaccttgcatatattatgcattatctttaccaacttagctaagttcatgaggacgt 329  Q
    |||||||||||| || ||||||||||||||||||||| || ||||||||| ||||||| ||| | ||||||    
T  38448865 gggattcgaaccccggaccttgcatatattatgcattgtccttaccaactgagctaagctcacggggacgt 38448935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 263 - 327
Target Start/End: Complemental strand, 30795759 - 30795695
Alignment:
Q  263 ttcgaacctcgtaccttgcatatattatgcattatctttaccaacttagctaagttcatgaggac 327  Q
    ||||||||| | ||||||||||||||||||||| |  ||||||||| ||||||||||| ||||||    
T  30795759 ttcgaaccttggaccttgcatatattatgcattgttcttaccaactgagctaagttcacgaggac 30795695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 275 - 323
Target Start/End: Complemental strand, 50263426 - 50263378
Alignment:
Q  275 accttgcatatattatgcattatctttaccaacttagctaagttcatga 323  Q
    |||||||||||||||||||||||| ||||||||| ||||||| ||||||    
T  50263426 accttgcatatattatgcattatcgttaccaactgagctaagctcatga 50263378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 261 - 316
Target Start/End: Original strand, 34808564 - 34808619
Alignment:
Q  261 gattcgaacctcgtaccttgcatatattatgcattatctttaccaacttagctaag 316  Q
    ||||||||||||| ||||||||||||||||||||| || ||| ||||| |||||||    
T  34808564 gattcgaacctcgaaccttgcatatattatgcattgtccttaacaactgagctaag 34808619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 253 - 324
Target Start/End: Complemental strand, 51509711 - 51509640
Alignment:
Q  253 gtgtttgggattcgaacctcgtaccttgcatatattatgcattatctttaccaacttagctaagttcatgag 324  Q
    ||||| ||| ||||||| ||| ||||||| |||||||||||| ||| ||||||||| ||||||||| |||||    
T  51509711 gtgttcggggttcgaacatcggaccttgcgtatattatgcataatcgttaccaactgagctaagttgatgag 51509640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 266 - 328
Target Start/End: Original strand, 8269374 - 8269436
Alignment:
Q  266 gaacctcgtaccttgcatatattatgcattatctttaccaacttagctaagttcatgaggacg 328  Q
    ||||| || ||||||||||||||||| ||| || ||||||||| ||||||||||| |||||||    
T  8269374 gaaccccggaccttgcatatattatgtattgtccttaccaactgagctaagttcacgaggacg 8269436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 261 - 327
Target Start/End: Original strand, 28979277 - 28979343
Alignment:
Q  261 gattcgaacctcgtaccttgcatatattatgcattatctttaccaacttagctaagttcatgaggac 327  Q
    |||| |||||||| | ||||||||||||||||||||||| || ||| | ||||||||||| ||||||    
T  28979277 gatttgaacctcgaatcttgcatatattatgcattatctctatcaaatgagctaagttcaggaggac 28979343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 275 - 320
Target Start/End: Original strand, 10843336 - 10843381
Alignment:
Q  275 accttgcatatattatgcattatctttaccaacttagctaagttca 320  Q
    |||||||||||||||||||||||| ||| ||||| |||||||||||    
T  10843336 accttgcatatattatgcattatccttatcaactgagctaagttca 10843381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 278 - 327
Target Start/End: Complemental strand, 13779621 - 13779572
Alignment:
Q  278 ttgcatatattatgcattatctttaccaacttagctaagttcatgaggac 327  Q
    |||||||||||||||||| ||| || ||||| ||||||||||||||||||    
T  13779621 ttgcatatattatgcattgtctatatcaactgagctaagttcatgaggac 13779572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 263 - 316
Target Start/End: Original strand, 47528450 - 47528503
Alignment:
Q  263 ttcgaacctcgtaccttgcatatattatgcattatctttaccaacttagctaag 316  Q
    ||||||||||| ||||||| ||||||||||||| || ||||||||| |||||||    
T  47528450 ttcgaacctcggaccttgcgtatattatgcattgtccttaccaactgagctaag 47528503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 259 - 308
Target Start/End: Original strand, 47719106 - 47719155
Alignment:
Q  259 gggattcgaacctcgtaccttgcatatattatgcattatctttaccaact 308  Q
    |||||||||||  || |||||||||||||||||||||||| |||||||||    
T  47719106 gggattcgaactccgaaccttgcatatattatgcattatccttaccaact 47719155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 259 - 316
Target Start/End: Original strand, 50638915 - 50638972
Alignment:
Q  259 gggattcgaacctcgtaccttgcatatattatgcattatctttaccaacttagctaag 316  Q
    ||||||||||||  | ||||||||||||||||||||| || ||||||||| |||||||    
T  50638915 gggattcgaaccctggaccttgcatatattatgcattgtccttaccaactgagctaag 50638972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 258 - 314
Target Start/End: Original strand, 9872103 - 9872159
Alignment:
Q  258 tgggattcgaacctcgtaccttgcatatattatgcattatctttaccaacttagcta 314  Q
    |||| |||||||| |  |||||||||||||||||||||||| ||||||||| |||||    
T  9872103 tggggttcgaaccgcaaaccttgcatatattatgcattatccttaccaactgagcta 9872159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 263 - 311
Target Start/End: Original strand, 17221523 - 17221571
Alignment:
Q  263 ttcgaacctcgtaccttgcatatattatgcattatctttaccaacttag 311  Q
    ||||||||||| ||||||||||||||||||||| |  ||||||||||||    
T  17221523 ttcgaacctcggaccttgcatatattatgcattgttcttaccaacttag 17221571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 315
Target Start/End: Original strand, 24124829 - 24124885
Alignment:
Q  259 gggattcgaacctcgtaccttgcatatattatgcattatctttaccaacttagctaa 315  Q
    ||||||| ||||||| ||||||||||||||||||||| || ||| ||||| ||||||    
T  24124829 gggattcaaacctcgaaccttgcatatattatgcattgtccttaacaactgagctaa 24124885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 260 - 308
Target Start/End: Complemental strand, 24631900 - 24631852
Alignment:
Q  260 ggattcgaacctcgtaccttgcatatattatgcattatctttaccaact 308  Q
    |||||||||||| | | |||||||||||||||||||||| |||||||||    
T  24631900 ggattcgaaccttggatcttgcatatattatgcattatccttaccaact 24631852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 275 - 327
Target Start/End: Complemental strand, 27127270 - 27127218
Alignment:
Q  275 accttgcatatattatgcattatctttaccaacttagctaagttcatgaggac 327  Q
    |||||| ||||||||||||||||| |||| |||| ||||||| ||||||||||    
T  27127270 accttgtatatattatgcattatccttactaactgagctaagctcatgaggac 27127218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 275 - 327
Target Start/End: Original strand, 31061918 - 31061970
Alignment:
Q  275 accttgcatatattatgcattatctttaccaacttagctaagttcatgaggac 327  Q
    |||||||||||| |||||||| || ||||||||| || |||||||||||||||    
T  31061918 accttgcatataatatgcattgtccttaccaactgagttaagttcatgaggac 31061970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 327
Target Start/End: Complemental strand, 34632231 - 34632163
Alignment:
Q  259 gggattcgaacctcgtaccttgcatatattatgcattatctttaccaacttagctaagttcatgaggac 327  Q
    |||||| |||||||| | |||||||||||||| |||| ||| |||||||| ||||||| ||| ||||||    
T  34632231 gggatttgaacctcggatcttgcatatattatacattgtctataccaactgagctaagctcacgaggac 34632163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 275 - 327
Target Start/End: Original strand, 52441526 - 52441578
Alignment:
Q  275 accttgcatatattatgcattatctttaccaacttagctaagttcatgaggac 327  Q
    ||||||||||||||||||||| ||| |||||||| ||||||| ||| ||||||    
T  52441526 accttgcatatattatgcattgtctataccaactgagctaagctcacgaggac 52441578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 277 - 308
Target Start/End: Complemental strand, 40618954 - 40618923
Alignment:
Q  277 cttgcatatattatgcattatctttaccaact 308  Q
    ||||||||||||||||||||||||||||||||    
T  40618954 cttgcatatattatgcattatctttaccaact 40618923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 260 - 327
Target Start/End: Original strand, 44678017 - 44678084
Alignment:
Q  260 ggattcgaacctcgtaccttgcatatattatgcattatctttaccaacttagctaagttcatgaggac 327  Q
    ||||| ||||| || ||||||||||||||||||||| ||| ||| |||| ||||||| | ||||||||    
T  44678017 ggatttgaaccccgaaccttgcatatattatgcattgtctatacaaactgagctaagcttatgaggac 44678084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 282 - 321
Target Start/End: Original strand, 52202319 - 52202358
Alignment:
Q  282 atatattatgcattatctttaccaacttagctaagttcat 321  Q
    |||||||||||||||||| |||||||| ||||||||||||    
T  52202319 atatattatgcattatctctaccaactgagctaagttcat 52202358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 53
Target Start/End: Complemental strand, 13735622 - 13735580
Alignment:
Q  11 ttcagggactaaattgactaacagagtctacattcattgacta 53  Q
    ||||||||||||| |||||||| ||||||||||| ||||||||    
T  13735622 ttcagggactaaagtgactaacggagtctacatttattgacta 13735580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 30 - 84
Target Start/End: Original strand, 13735631 - 13735685
Alignment:
Q  30 aacagagtctacattcattgactattttgcaatttatctgcattcagggactaaa 84  Q
    |||||||||||||||||  |||| ||||||||||| | ||||||||| |||||||    
T  13735631 aacagagtctacattcagggactgttttgcaatttctttgcattcagagactaaa 13735685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 253 - 295
Target Start/End: Original strand, 31401646 - 31401688
Alignment:
Q  253 gtgtttgggattcgaacctcgtaccttgcatatattatgcatt 295  Q
    |||| ||||||||||| |||| |||||||||||||||||||||    
T  31401646 gtgtctgggattcgaatctcggaccttgcatatattatgcatt 31401688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 266 - 327
Target Start/End: Original strand, 2817379 - 2817440
Alignment:
Q  266 gaacctcgtaccttgcatatattatgcattatctttaccaacttagctaagttcatgaggac 327  Q
    |||| ||| ||||| ||||||||||||||| || ||||||||| |||||| |||||| ||||    
T  2817379 gaacttcggaccttacatatattatgcattgtccttaccaactgagctaaattcatggggac 2817440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 320
Target Start/End: Original strand, 3509956 - 3510001
Alignment:
Q  275 accttgcatatattatgcattatctttaccaacttagctaagttca 320  Q
    ||||||||||||||||||||| ||  |||||||| |||||||||||    
T  3509956 accttgcatatattatgcattgtccataccaactgagctaagttca 3510001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 278 - 327
Target Start/End: Original strand, 3935802 - 3935851
Alignment:
Q  278 ttgcatatattatgcattatctttaccaacttagctaagttcatgaggac 327  Q
    |||||||||||||||||||||| || |||||||| |||| ||| ||||||    
T  3935802 ttgcatatattatgcattatctataacaacttagttaagctcacgaggac 3935851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 320
Target Start/End: Original strand, 10132459 - 10132504
Alignment:
Q  275 accttgcatatattatgcattatctttaccaacttagctaagttca 320  Q
    ||||||||||||||||||||| || ||||||||| | |||||||||    
T  10132459 accttgcatatattatgcattgtccttaccaactgatctaagttca 10132504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 253 - 298
Target Start/End: Complemental strand, 10385356 - 10385311
Alignment:
Q  253 gtgtttgggattcgaacctcgtaccttgcatatattatgcattatc 298  Q
    ||||||||||||| |||  || ||||||||||||||||||||||||    
T  10385356 gtgtttgggattcaaactccgaaccttgcatatattatgcattatc 10385311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 263 - 316
Target Start/End: Complemental strand, 13054931 - 13054878
Alignment:
Q  263 ttcgaacctcgtaccttgcatatattatgcattatctttaccaacttagctaag 316  Q
    ||||||||||  ||||||||||||||||||||| ||  |||||||| |||||||    
T  13054931 ttcgaacctccgaccttgcatatattatgcattgtccctaccaactaagctaag 13054878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 253 - 314
Target Start/End: Original strand, 13615605 - 13615666
Alignment:
Q  253 gtgtttgggattcgaacctcgtaccttgcatatattatgcattatctttaccaacttagcta 314  Q
    ||||| ||| ||||||||| | ||||||||| ||||||||||| || ||||||||| |||||    
T  13615605 gtgttcggggttcgaaccttggaccttgcatgtattatgcattgtccttaccaactgagcta 13615666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 316
Target Start/End: Original strand, 13794523 - 13794564
Alignment:
Q  275 accttgcatatattatgcattatctttaccaacttagctaag 316  Q
    |||||||||||||||||||||||| ||| ||||| |||||||    
T  13794523 accttgcatatattatgcattatccttatcaactgagctaag 13794564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 316
Target Start/End: Complemental strand, 17283997 - 17283956
Alignment:
Q  275 accttgcatatattatgcattatctttaccaacttagctaag 316  Q
    ||||||||||||||||||||| || ||||||||| |||||||    
T  17283997 accttgcatatattatgcattgtccttaccaactgagctaag 17283956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 320
Target Start/End: Original strand, 22946565 - 22946610
Alignment:
Q  275 accttgcatatattatgcattatctttaccaacttagctaagttca 320  Q
    ||||||||||||||||||||| |  ||||||||| |||||||||||    
T  22946565 accttgcatatattatgcattgttcttaccaactaagctaagttca 22946610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 315
Target Start/End: Complemental strand, 23460535 - 23460483
Alignment:
Q  262 attcgaacctcgtaccttgcatatattatgcattatctttaccaacttagctaa 315  Q
    |||||||||||  ||||||||||| ||||||||||| | |||||||||||||||    
T  23460535 attcgaacctcaaaccttgcatattttatgcattat-tctaccaacttagctaa 23460483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 278 - 327
Target Start/End: Original strand, 26803469 - 26803518
Alignment:
Q  278 ttgcatatattatgcattatctttaccaacttagctaagttcatgaggac 327  Q
    |||||||||||||||||| ||  |||||||| ||||||||||| ||||||    
T  26803469 ttgcatatattatgcattgtccataccaactgagctaagttcacgaggac 26803518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 263 - 324
Target Start/End: Complemental strand, 29251812 - 29251751
Alignment:
Q  263 ttcgaacctcgtaccttgcatatattatgcattatctttaccaacttagctaagttcatgag 324  Q
    ||||||||||  ||||||||||||||||||||| ||  ||| |||  |||||||||||||||    
T  29251812 ttcgaacctcagaccttgcatatattatgcattgtcgatacaaacagagctaagttcatgag 29251751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 46
Target Start/End: Original strand, 32374098 - 32374135
Alignment:
Q  9 cattcagggactaaattgactaacagagtctacattca 46  Q
    ||||||||||||||||||||||||||||| | ||||||    
T  32374098 cattcagggactaaattgactaacagagtttgcattca 32374135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 316
Target Start/End: Complemental strand, 35473998 - 35473957
Alignment:
Q  275 accttgcatatattatgcattatctttaccaacttagctaag 316  Q
    |||||||||||||||||||||||| ||||||| | |||||||    
T  35473998 accttgcatatattatgcattatccttaccaattgagctaag 35473957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 281 - 318
Target Start/End: Original strand, 35805318 - 35805355
Alignment:
Q  281 catatattatgcattatctttaccaacttagctaagtt 318  Q
    ||||||||||||||||||| |||||||| |||||||||    
T  35805318 catatattatgcattatctctaccaactgagctaagtt 35805355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 46
Target Start/End: Complemental strand, 37608119 - 37608082
Alignment:
Q  9 cattcagggactaaattgactaacagagtctacattca 46  Q
    |||||| |||||||||||||||||||||||| ||||||    
T  37608119 cattcaaggactaaattgactaacagagtctgcattca 37608082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 316
Target Start/End: Original strand, 39387806 - 39387847
Alignment:
Q  275 accttgcatatattatgcattatctttaccaacttagctaag 316  Q
    ||||||||||| ||||||||||||  ||||||||||||||||    
T  39387806 accttgcatattttatgcattatccataccaacttagctaag 39387847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 266 - 327
Target Start/End: Original strand, 41763161 - 41763222
Alignment:
Q  266 gaacctcgtaccttgcatatattatgcattatctttaccaacttagctaagttcatgaggac 327  Q
    ||||| || ||||||||||| ||||||||||||  |||||||| ||||||| ||| ||||||    
T  41763161 gaaccccggaccttgcatattttatgcattatccctaccaactgagctaagctcacgaggac 41763222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 315
Target Start/End: Original strand, 47961287 - 47961344
Alignment:
Q  258 tgggattcgaacctcgtaccttgcatatattatgcattatctttaccaacttagctaa 315  Q
    |||| ||| ||||||| ||||||||||||||||||||| ||| | |||||| ||||||    
T  47961287 tgggtttcaaacctcggaccttgcatatattatgcattgtctctgccaactgagctaa 47961344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 257 - 321
Target Start/End: Complemental strand, 12500987 - 12500924
Alignment:
Q  257 ttgggattcgaacctcgtaccttgcatatattatgcattatctttaccaacttagctaagttcat 321  Q
    |||| ||||||||| || || |||||||||||||||||| || |||||||| | |||||||||||    
T  12500987 ttggtattcgaaccccgaactttgcatatattatgcattgtccttaccaac-tggctaagttcat 12500924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 81 - 129
Target Start/End: Complemental strand, 13735465 - 13735417
Alignment:
Q  81 taaagtgacaacttctttcctattcggggactaaagtgactaatctccc 129  Q
    |||||||||  || ||||||||||  |||||||||||||||||||||||    
T  13735465 taaagtgactgctcctttcctattaagggactaaagtgactaatctccc 13735417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 275 - 327
Target Start/End: Original strand, 21400038 - 21400090
Alignment:
Q  275 accttgcatatattatgcattatctttaccaacttagctaagttcatgaggac 327  Q
    ||||||||||||||||||||| ||  |||||||| ||||||| ||| ||||||    
T  21400038 accttgcatatattatgcattgtccctaccaactgagctaagctcacgaggac 21400090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 259 - 327
Target Start/End: Original strand, 23405357 - 23405425
Alignment:
Q  259 gggattcgaacctcgtaccttgcatatattatgcattatctttaccaacttagctaagttcatgaggac 327  Q
    ||||||||||||  | ||||||||||||||||||||| || ||| ||||| || |||| ||||| ||||    
T  23405357 gggattcgaaccctggaccttgcatatattatgcattgtccttaacaactaagttaagctcatggggac 23405425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 275 - 327
Target Start/End: Complemental strand, 26705646 - 26705594
Alignment:
Q  275 accttgcatatattatgcattatctttaccaacttagctaagttcatgaggac 327  Q
    ||||||||||||||||| ||| |  ||||||||| ||||||||||| ||||||    
T  26705646 accttgcatatattatgtattgttcttaccaactaagctaagttcacgaggac 26705594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 308
Target Start/End: Complemental strand, 28679747 - 28679695
Alignment:
Q  256 tttgggattcgaacctcgtaccttgcatatattatgcattatctttaccaact 308  Q
    ||||||| ||||||  || |||||||| |||||||||||| ||||||||||||    
T  28679747 tttgggaatcgaacagcggaccttgcagatattatgcattgtctttaccaact 28679695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 275 - 323
Target Start/End: Original strand, 30548106 - 30548154
Alignment:
Q  275 accttgcatatattatgcattatctttaccaacttagctaagttcatga 323  Q
    ||||||||||||||||||||| || ||||||||| || |||| ||||||    
T  30548106 accttgcatatattatgcattgtccttaccaactaagttaagctcatga 30548154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 275 - 315
Target Start/End: Complemental strand, 30561769 - 30561729
Alignment:
Q  275 accttgcatatattatgcattatctttaccaacttagctaa 315  Q
    ||||||||||||||||||||| |  ||||||||||||||||    
T  30561769 accttgcatatattatgcattgttcttaccaacttagctaa 30561729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 275 - 327
Target Start/End: Complemental strand, 31092707 - 31092655
Alignment:
Q  275 accttgcatatattatgcattatctttaccaacttagctaagttcatgaggac 327  Q
    ||||| |||||||||||||||||| ||||||| | || |||||||||| ||||    
T  31092707 accttacatatattatgcattatccttaccaaatgagttaagttcatggggac 31092655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 264 - 308
Target Start/End: Original strand, 32826709 - 32826753
Alignment:
Q  264 tcgaacctcgtaccttgcatatattatgcattatctttaccaact 308  Q
    |||||||| | ||||| ||||||||||||||||| ||||||||||    
T  32826709 tcgaaccttgaaccttacatatattatgcattatttttaccaact 32826753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 275 - 327
Target Start/End: Original strand, 36371055 - 36371107
Alignment:
Q  275 accttgcatatattatgcattatctttaccaacttagctaagttcatgaggac 327  Q
    ||||| ||||||||||||||| ||| |||||||| ||||||| ||| ||||||    
T  36371055 accttacatatattatgcattgtctctaccaactgagctaagctcacgaggac 36371107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 261 - 305
Target Start/End: Complemental strand, 40613083 - 40613039
Alignment:
Q  261 gattcgaacctcgtaccttgcatatattatgcattatctttacca 305  Q
    |||||||||| || ||||||||||||||||||||| || ||||||    
T  40613083 gattcgaaccccggaccttgcatatattatgcattgtccttacca 40613039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 275 - 327
Target Start/End: Original strand, 42045387 - 42045439
Alignment:
Q  275 accttgcatatattatgcattatctttaccaacttagctaagttcatgaggac 327  Q
    ||||||||||||||||||||| ||  |||||||| ||||||| ||| ||||||    
T  42045387 accttgcatatattatgcattgtccataccaactgagctaagctcacgaggac 42045439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 275 - 307
Target Start/End: Original strand, 45418078 - 45418110
Alignment:
Q  275 accttgcatatattatgcattatctttaccaac 307  Q
    |||||||||||||||||||||||| ||||||||    
T  45418078 accttgcatatattatgcattatccttaccaac 45418110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 275 - 327
Target Start/End: Complemental strand, 47417829 - 47417777
Alignment:
Q  275 accttgcatatattatgcattatctttaccaacttagctaagttcatgaggac 327  Q
    ||||||||||||||||||||| || | ||||| | || |||||||||||||||    
T  47417829 accttgcatatattatgcattgtcctaaccaattgagttaagttcatgaggac 47417777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 95; Significance: 2e-46; HSPs: 48)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 5 - 135
Target Start/End: Complemental strand, 13536679 - 13536549
Alignment:
Q  5 tctgcattcagggactaaattgactaacagagtctacattcattgactattttgcaatttatctgcattcagggactaaagtgacaacttctttcctatt 104  Q
    ||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||| | |||||||||  || ||||||||||    
T  13536679 tctgcattcagggactaaattgactaacagagtctacattcagggactattttgcaatttatctgcattcaggcattaaagtgacggctcctttcctatt 13536580  T
Q  105 cggggactaaagtgactaatctccccttatt 135  Q
    | ||||||||||||||||||||||| |||||    
T  13536579 cagggactaaagtgactaatctccctttatt 13536549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 5 - 129
Target Start/End: Original strand, 10588031 - 10588155
Alignment:
Q  5 tctgcattcagggactaaattgactaacagagtctacattcattgactattttgcaatttatctgcattcagggactaaagtgacaacttctttcctatt 104  Q
    |||||||||| |||||||||||||||| | ||||||||||||| ||||||||||||||||||||||||||| ||||| ||||||||||| ||||||||||    
T  10588031 tctgcattcaaggactaaattgactaataaagtctacattcatggactattttgcaatttatctgcattcatggacttaagtgacaactcctttcctatt 10588130  T
Q  105 cggggactaaagtgactaatctccc 129  Q
    | |||||||||||||||||||||||    
T  10588131 cagggactaaagtgactaatctccc 10588155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 5 - 129
Target Start/End: Original strand, 19295441 - 19295565
Alignment:
Q  5 tctgcattcagggactaaattgactaacagagtctacattcattgactattttgcaatttatctgcattcagggactaaagtgacaacttctttcctatt 104  Q
    ||||||||||||||||||||||||||||||||||| ||||||  |||||||||| ||||||||||||||||||||||||||| || ||| |||| |||||    
T  19295441 tctgcattcagggactaaattgactaacagagtctgcattcagggactattttgtaatttatctgcattcagggactaaagtaacgactccttttctatt 19295540  T
Q  105 cggggactaaagtgactaatctccc 129  Q
    | | |||||||||||||||||||||    
T  19295541 cagagactaaagtgactaatctccc 19295565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 5 - 127
Target Start/End: Complemental strand, 25089271 - 25089149
Alignment:
Q  5 tctgcattcagggactaaattgactaacagagtctacattcattgactattttgcaatttatctgcattcagggactaaagtgacaacttctttcctatt 104  Q
    ||||||||||  ||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||| |||||||||| | ||| || |||||||    
T  25089271 tctgcattcaatgactaaattgactaacagagtctacattcagggactattttgcaatttatctgcattcagagactaaagtggcgactcctctcctatt 25089172  T
Q  105 cggggactaaagtgactaatctc 127  Q
    |  ||||||||||||||||||||    
T  25089171 catggactaaagtgactaatctc 25089149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 29 - 129
Target Start/End: Complemental strand, 28752337 - 28752237
Alignment:
Q  29 taacagagtctacattcattgactattttgcaatttatctgcattcagggactaaagtgacaacttctttcctattcggggactaaagtgactaatctcc 128  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||| |||||||| | |||  |||||||||||||||||||||    
T  28752337 taacagagtctacattcatggactattttgcaatttatctgcattcaggtactaaagtgacatcttctttcttgttcaaggactaaagtgactaatctcc 28752238  T
Q  129 c 129  Q
    |    
T  28752237 c 28752237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 5 - 124
Target Start/End: Original strand, 21222625 - 21222746
Alignment:
Q  5 tctgcattcagggactaaattgactaacagagtctacattcattgactattttgcaatttatc--tgcattcagggactaaagtgacaacttctttccta 102  Q
    ||||||||||| |||||| |||||||||| ||| ||||||||  |||||||||||||||||||  | |||||||||||||||||||| | ||||||||||    
T  21222625 tctgcattcagagactaagttgactaacatagtatacattcagagactattttgcaatttatctatacattcagggactaaagtgacgatttctttccta 21222724  T
Q  103 ttcggggactaaagtgactaat 124  Q
    ||| ||||| ||||||||||||    
T  21222725 ttcagggaccaaagtgactaat 21222746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 5 - 129
Target Start/End: Complemental strand, 10862132 - 10862008
Alignment:
Q  5 tctgcattcagggactaaattgactaacagagtctacattcattgactattttgcaatttatctgcattcagggactaaagtgacaacttctttcctatt 104  Q
    ||||| |||||||| | |||||||||||||||||||||||||  |||||  |||||||| || |||||||||||||||||||||| ||| ||||   |||    
T  10862132 tctgccttcagggattgaattgactaacagagtctacattcagggactacattgcaattaatttgcattcagggactaaagtgacgactccttttacatt 10862033  T
Q  105 cggggactaaagtgactaatctccc 129  Q
    | | ||||||| |||||||||||||    
T  10862032 cagagactaaaatgactaatctccc 10862008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 21 - 124
Target Start/End: Complemental strand, 10587990 - 10587887
Alignment:
Q  21 aaattgactaacagagtctacattcattgactattttgcaatttatctgcattcagggactaaagtgacaacttctttcctattcggggactaaagtgac 120  Q
    |||||||  |||| ||||||||||||  |||| ||||||||||| |||||||||||||||||||||||| ||| |||||  ||||  |||||||||||||    
T  10587990 aaattgaacaacatagtctacattcagggactgttttgcaatttctctgcattcagggactaaagtgactactcctttctcattcatggactaaagtgac 10587891  T
Q  121 taat 124  Q
    ||||    
T  10587890 taat 10587887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 21 - 124
Target Start/End: Complemental strand, 19295384 - 19295281
Alignment:
Q  21 aaattgactaacagagtctacattcattgactattttgcaatttatctgcattcagggactaaagtgacaacttctttcctattcggggactaaagtgac 120  Q
    ||||||||||||| || ||| ||| |  |||| ||||||||||| || ||||||||||||||||||||| ||| |||||||||||  |||||||||||||    
T  19295384 aaattgactaacatagcctatatttagggactgttttgcaatttctcagcattcagggactaaagtgactactcctttcctattcaaggactaaagtgac 19295285  T
Q  121 taat 124  Q
    ||||    
T  19295284 taat 19295281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 33 - 133
Target Start/End: Original strand, 13536749 - 13536848
Alignment:
Q  33 agagtctacattcattgactattttgcaatttatctgcattcagggactaaagtgacaacttctttcctattcggggactaaagtgactaatctcccctt 132  Q
    ||||||||||||||  |||| ||||||||||| |||| |||||| |||||||||||| ||| |||||  ||||  ||||||||||||||||| |||||||    
T  13536749 agagtctacattcagggactgttttgcaatttctctgtattcagagactaaagtgactactcctttctcattcaaggactaaagtgactaat-tcccctt 13536847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 21 - 124
Target Start/End: Complemental strand, 21222568 - 21222465
Alignment:
Q  21 aaattgactaacagagtctacattcattgactattttgcaatttatctgcattcagggactaaagtgacaacttctttcctattcggggactaaagtgac 120  Q
    ||||||||||||||||||||| ||||  |||| ||||||||||| |||||||||| ||||| ||||||| |||  ||||  |||| || |||||||| ||    
T  21222568 aaattgactaacagagtctacgttcaaggactgttttgcaatttctctgcattcaaggacttaagtgactactcttttctcattcaggaactaaagttac 21222469  T
Q  121 taat 124  Q
    ||||    
T  21222468 taat 21222465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 21 - 124
Target Start/End: Original strand, 26705204 - 26705307
Alignment:
Q  21 aaattgactaacagagtctacattcattgactattttgcaatttatctgcattcagggactaaagtgacaacttctttcctattcggggactaaagtgac 120  Q
    |||||||| ||||  |||||||||||  |||| ||||||||||| ||| |||||||||||||||||||| |||  ||| | |||| || |||||||||||    
T  26705204 aaattgaccaacaacgtctacattcagggactgttttgcaatttctctacattcagggactaaagtgactactctttttccattcaggaactaaagtgac 26705303  T
Q  121 taat 124  Q
    ||||    
T  26705304 taat 26705307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 7 - 129
Target Start/End: Original strand, 10672780 - 10672900
Alignment:
Q  7 tgcattcagggactaaattgactaacagagtctacattcattgactattttgcaatttatctgcattcagggactaaagtgacaacttctttcctattcg 106  Q
    ||||||||| ||||||||||| ||||| | ||||||||||   ||||||||||||||||||||||||||  ||||||| | | ||||  ||||||||||     
T  10672780 tgcattcagagactaaattgattaacaaa-tctacattcaggaactattttgcaatttatctgcattcaaagactaaaataataactcatttcctattca 10672878  T
Q  107 gggactaaagtgactaatctccc 129  Q
    |  |||||| |||||||||||||    
T  10672879 gaaactaaa-tgactaatctccc 10672900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 8 - 88
Target Start/End: Original strand, 12651245 - 12651325
Alignment:
Q  8 gcattcagggactaaattgactaacagagtctacattcattgactattttgcaatttatctgcattcagggactaaagtga 88  Q
    |||||||||||| |||||||||||| ||||||| |||||  || ||||| ||||||||||||||||||  || ||||||||    
T  12651245 gcattcagggaccaaattgactaacggagtctatattcaaagattatttagcaatttatctgcattcacagattaaagtga 12651325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 259 - 327
Target Start/End: Complemental strand, 21847256 - 21847188
Alignment:
Q  259 gggattcgaacctcgtaccttgcatatattatgcattatctttaccaacttagctaagttcatgaggac 327  Q
    |||||||||||| |||||||||||||||||||| ||| ||  |||||||| ||||||| ||| ||||||    
T  21847256 gggattcgaaccccgtaccttgcatatattatgtattgtccctaccaactgagctaagctcaagaggac 21847188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 259 - 315
Target Start/End: Original strand, 32193858 - 32193914
Alignment:
Q  259 gggattcgaacctcgtaccttgcatatattatgcattatctttaccaacttagctaa 315  Q
    |||||| |||||||||||||||||||||||||||||| |  ||||||||| ||||||    
T  32193858 gggatttgaacctcgtaccttgcatatattatgcattgttcttaccaactgagctaa 32193914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 261 - 316
Target Start/End: Complemental strand, 4450322 - 4450267
Alignment:
Q  261 gattcgaacctcgtaccttgcatatattatgcattatctttaccaacttagctaag 316  Q
    |||||||||| || ||||||||||||||||||||| |||||| ||||| |||||||    
T  4450322 gattcgaaccccggaccttgcatatattatgcattgtctttatcaactgagctaag 4450267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 275 - 318
Target Start/End: Complemental strand, 19554199 - 19554156
Alignment:
Q  275 accttgcatatattatgcattatctttaccaacttagctaagtt 318  Q
    ||||||||||||||||||||| |||||||||||| |||||||||    
T  19554199 accttgcatatattatgcattgtctttaccaactaagctaagtt 19554156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 253 - 328
Target Start/End: Original strand, 23629830 - 23629905
Alignment:
Q  253 gtgtttgggattcgaacctcgtaccttgcatatattatgcattatctttaccaacttagctaagttcatgaggacg 328  Q
    ||||| ||| || |||| || |||||||||||||||||||||| || ||||||| | ||||||||||| |||||||    
T  23629830 gtgttcggggtttgaacttcataccttgcatatattatgcattgtcattaccaattgagctaagttcacgaggacg 23629905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 21 - 124
Target Start/End: Original strand, 25089328 - 25089431
Alignment:
Q  21 aaattgactaacagagtctacattcattgactattttgcaatttatctgcattcagggactaaagtgacaacttctttcctattcggggactaaagtgac 120  Q
    |||||||| |||| |||||| |||||   ||| ||||||||||| ||||||||||| |||||||||||| | |  ||  | |||| ||||||||||||||    
T  25089328 aaattgaccaacatagtctatattcaggaactgttttgcaatttctctgcattcagtgactaaagtgactattcattgtccattcagggactaaagtgac 25089427  T
Q  121 taat 124  Q
    ||||    
T  25089428 taat 25089431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 275 - 326
Target Start/End: Original strand, 32409193 - 32409244
Alignment:
Q  275 accttgcatatattatgcattatctttaccaacttagctaagttcatgagga 326  Q
    ||||| ||||||||||||||| |||||||||||| || ||||||||||||||    
T  32409193 accttacatatattatgcattgtctttaccaactcagttaagttcatgagga 32409244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 253 - 315
Target Start/End: Complemental strand, 35110122 - 35110060
Alignment:
Q  253 gtgtttgggattcgaacctcgtaccttgcatatattatgcattatctttaccaacttagctaa 315  Q
    ||||||||| ||||||||||  ||||| |||||||||||||||||||| ||||| | ||||||    
T  35110122 gtgtttggggttcgaacctcaaaccttacatatattatgcattatcttgaccaattgagctaa 35110060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 263 - 308
Target Start/End: Original strand, 1918461 - 1918506
Alignment:
Q  263 ttcgaacctcgtaccttgcatatattatgcattatctttaccaact 308  Q
    ||||||||||| ||||||||||||||||||||| ||| ||||||||    
T  1918461 ttcgaacctcggaccttgcatatattatgcattgtctataccaact 1918506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 10 - 91
Target Start/End: Complemental strand, 19780590 - 19780509
Alignment:
Q  10 attcagggactaaattgactaacagagtctacattcattgactattttgcaatttatctgcattcagggactaaagtgacaa 91  Q
    ||||||||| |||||||||||| | | ||| |||| || ||||||||||||||||||||  | ||||  |||||||||||||    
T  19780590 attcagggattaaattgactaataaaatcttcattgatagactattttgcaatttatctatactcagttactaaagtgacaa 19780509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 274 - 327
Target Start/End: Original strand, 30370164 - 30370217
Alignment:
Q  274 taccttgcatatattatgcattatctttaccaacttagctaagttcatgaggac 327  Q
    |||||| |||||||||||||||||||||||||||| | ||||| ||| ||||||    
T  30370164 taccttacatatattatgcattatctttaccaactgaactaagctcacgaggac 30370217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 267 - 327
Target Start/End: Original strand, 4922415 - 4922475
Alignment:
Q  267 aacctcgtaccttgcatatattatgcattatctttaccaacttagctaagttcatgaggac 327  Q
    |||||| ||| ||||||||||||| |||||||  |||||||| || |||||||||||||||    
T  4922415 aacctcatacgttgcatatattatacattatccctaccaactaagttaagttcatgaggac 4922475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 275 - 327
Target Start/End: Complemental strand, 8810686 - 8810634
Alignment:
Q  275 accttgcatatattatgcattatctttaccaacttagctaagttcatgaggac 327  Q
    ||||||||||||||||| ||| |||||||||||| ||||||| ||| ||||||    
T  8810686 accttgcatatattatgtattgtctttaccaactgagctaagctcacgaggac 8810634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 253 - 308
Target Start/End: Complemental strand, 404231 - 404176
Alignment:
Q  253 gtgtttgggattcgaacctcgtaccttgcatatattatgcattatctttaccaact 308  Q
    |||| |||| ||||||||||| || |||||||||||||||||| || |||||||||    
T  404231 gtgtctggggttcgaacctcggacattgcatatattatgcattgtccttaccaact 404176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 35 - 86
Target Start/End: Original strand, 10862202 - 10862253
Alignment:
Q  35 agtctacattcattgactattttgcaatttatctgcattcagggactaaagt 86  Q
    ||||||||||||   ||| ||||||||||| |||||||||||||||||||||    
T  10862202 agtctacattcagctactgttttgcaatttctctgcattcagggactaaagt 10862253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 11 - 46
Target Start/End: Complemental strand, 13536738 - 13536703
Alignment:
Q  11 ttcagggactaaattgactaacagagtctacattca 46  Q
    ||||||||||||| ||||||||||||||||||||||    
T  13536738 ttcagggactaaagtgactaacagagtctacattca 13536703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 253 - 316
Target Start/End: Original strand, 17829301 - 17829364
Alignment:
Q  253 gtgtttgggattcgaacctcgtaccttgcatatattatgcattatctttaccaacttagctaag 316  Q
    ||||| ||| ||||||||||| || |||||||||||||||||  || ||||||||| |||||||    
T  17829301 gtgttcggggttcgaacctcggactttgcatatattatgcatagtccttaccaactgagctaag 17829364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 78 - 129
Target Start/End: Complemental strand, 26705094 - 26705043
Alignment:
Q  78 gactaaagtgacaacttctttcctattcggggactaaagtgactaatctccc 129  Q
    |||||||||||||||||||||  |||||  |||||||||||| |||||||||    
T  26705094 gactaaagtgacaacttcttttttattcatggactaaagtgaataatctccc 26705043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 257 - 327
Target Start/End: Complemental strand, 8217447 - 8217377
Alignment:
Q  257 ttgggattcgaacctcgtaccttgcatatattatgcattatctttaccaacttagctaagttcatgaggac 327  Q
    |||||||| |||||||| ||||||||||||||||| ||| | | ||||| || ||||||| ||| ||||||    
T  8217447 ttgggatttgaacctcgaaccttgcatatattatgtattgtgtctaccagctgagctaagctcacgaggac 8217377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 261 - 315
Target Start/End: Original strand, 30639427 - 30639481
Alignment:
Q  261 gattcgaacctcgtaccttgcatatattatgcattatctttaccaacttagctaa 315  Q
    ||||||||||||  |||||||||||||||||||||||   |||||||| ||||||    
T  30639427 gattcgaacctcagaccttgcatatattatgcattattcctaccaactgagctaa 30639481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 266 - 308
Target Start/End: Complemental strand, 31971584 - 31971542
Alignment:
Q  266 gaacctcgtaccttgcatatattatgcattatctttaccaact 308  Q
    |||||||| ||||||||||||||||||||| || |||||||||    
T  31971584 gaacctcggaccttgcatatattatgcattgtccttaccaact 31971542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 316
Target Start/End: Complemental strand, 334186 - 334145
Alignment:
Q  275 accttgcatatattatgcattatctttaccaacttagctaag 316  Q
    ||||||||||||||||||||| |||||| ||||| |||||||    
T  334186 accttgcatatattatgcattgtctttatcaactgagctaag 334145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 263 - 316
Target Start/End: Original strand, 655752 - 655805
Alignment:
Q  263 ttcgaacctcgtaccttgcatatattatgcattatctttaccaacttagctaag 316  Q
    |||||||| || ||||||||||||||||||||| ||  |||||||| |||||||    
T  655752 ttcgaaccccggaccttgcatatattatgcattgtcgataccaactgagctaag 655805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 266 - 327
Target Start/End: Complemental strand, 32053843 - 32053782
Alignment:
Q  266 gaacctcgtaccttgcatatattatgcattatctttaccaacttagctaagttcatgaggac 327  Q
    ||||| || ||||||||||||||||||||| ||  |||||||| ||||||| ||| ||||||    
T  32053843 gaaccacgaaccttgcatatattatgcattgtccataccaactgagctaagctcacgaggac 32053782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 275 - 327
Target Start/End: Original strand, 331901 - 331953
Alignment:
Q  275 accttgcatatattatgcattatctttaccaacttagctaagttcatgaggac 327  Q
    ||||||||||||||||||||| ||| |||||||| || |||| ||| ||||||    
T  331901 accttgcatatattatgcattgtctctaccaactgagttaagctcacgaggac 331953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 275 - 327
Target Start/End: Complemental strand, 788912 - 788860
Alignment:
Q  275 accttgcatatattatgcattatctttaccaacttagctaagttcatgaggac 327  Q
    ||||||||||||||||||||| || ||||||||| || |||| ||| ||||||    
T  788912 accttgcatatattatgcattgtccttaccaactgagataagctcacgaggac 788860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 263 - 327
Target Start/End: Original strand, 2726420 - 2726484
Alignment:
Q  263 ttcgaacctcgtaccttgcatatattatgcattatctttaccaacttagctaagttcatgaggac 327  Q
    |||||||| || ||||||||||||||||||||| ||  |||||||| || |||||| | ||||||    
T  2726420 ttcgaaccccggaccttgcatatattatgcattgtccataccaactgagttaagtttacgaggac 2726484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 275 - 327
Target Start/End: Original strand, 7081669 - 7081721
Alignment:
Q  275 accttgcatatattatgcattatctttaccaacttagctaagttcatgaggac 327  Q
    ||||||||||||||||| ||| |||||| ||||| ||||||| ||| ||||||    
T  7081669 accttgcatatattatgtattgtctttatcaactgagctaagctcacgaggac 7081721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 275 - 327
Target Start/End: Complemental strand, 12412323 - 12412271
Alignment:
Q  275 accttgcatatattatgcattatctttaccaacttagctaagttcatgaggac 327  Q
    ||||||||||||||||||||| ||| |||||||| || |||| ||| ||||||    
T  12412323 accttgcatatattatgcattgtctctaccaactaagttaagctcacgaggac 12412271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 263 - 327
Target Start/End: Original strand, 15291693 - 15291757
Alignment:
Q  263 ttcgaacctcgtaccttgcatatattatgcattatctttaccaacttagctaagttcatgaggac 327  Q
    ||||||||||  |||||||||||||||| |||| || ||||||||| || |||| ||| ||||||    
T  15291693 ttcgaacctcaaaccttgcatatattattcattgtccttaccaactaagttaagctcacgaggac 15291757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 275 - 327
Target Start/End: Complemental strand, 17151282 - 17151230
Alignment:
Q  275 accttgcatatattatgcattatctttaccaacttagctaagttcatgaggac 327  Q
    ||||||||||||||||| ||| ||  |||||||||||||||| ||| ||||||    
T  17151282 accttgcatatattatgtattgtcactaccaacttagctaagctcacgaggac 17151230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 275 - 327
Target Start/End: Complemental strand, 18256929 - 18256877
Alignment:
Q  275 accttgcatatattatgcattatctttaccaacttagctaagttcatgaggac 327  Q
    ||||||||||||||||||||| || ||| ||||| ||||||| ||| ||||||    
T  18256929 accttgcatatattatgcattgtccttatcaactgagctaagctcacgaggac 18256877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 9 - 53
Target Start/End: Complemental strand, 25089299 - 25089255
Alignment:
Q  9 cattcagggactaaattgactaacagagtctacattcattgacta 53  Q
    |||||||||||||||||||||||  |||||| |||||| ||||||    
T  25089299 cattcagggactaaattgactaatggagtctgcattcaatgacta 25089255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 31
Target Start/End: Complemental strand, 26705117 - 26705089
Alignment:
Q  3 aatctgcattcagggactaaattgactaa 31  Q
    |||||||||||||||||||||||||||||    
T  26705117 aatctgcattcagggactaaattgactaa 26705089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 84; Significance: 8e-40; HSPs: 76)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 37543948 - 37544071
Alignment:
Q  1 ggaatctgcattcagggactaaattgactaacagagtctacattcattgactattttgcaatttatctgcattcagggactaaagtgacaacttctttcc 100  Q
    |||||||||||||||||| |||||||||||||| |||||||| ||| ||||||||||||||||||||| ||||||||||||||| || | |||||||||     
T  37543948 ggaatctgcattcagggattaaattgactaacaaagtctacaatcaatgactattttgcaatttatctacattcagggactaaaatggcgacttctttca 37544047  T
Q  101 tattcggggactaaagtgactaat 124  Q
    ||||| ||||||||||||||||||    
T  37544048 tattcagggactaaagtgactaat 37544071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 5 - 129
Target Start/End: Complemental strand, 21124446 - 21124322
Alignment:
Q  5 tctgcattcagggactaaattgactaacagagtctacattcattgactattttgcaatttatctgcattcagggactaaagtgacaacttctttcctatt 104  Q
    ||||||||||||||||||||||||||| |||||||||||| |  ||||||||||||||||||||| |||||| ||||||||||||  || ||||||||||    
T  21124446 tctgcattcagggactaaattgactaatagagtctacatttagagactattttgcaatttatctgtattcagagactaaagtgacgtctcctttcctatt 21124347  T
Q  105 cggggactaaagtgactaatctccc 129  Q
    | |||||||||| | ||||||||||    
T  21124346 cagggactaaagcggctaatctccc 21124322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 5 - 129
Target Start/End: Original strand, 25149398 - 25149522
Alignment:
Q  5 tctgcattcagggactaaattgactaacagagtctacattcattgactattttgcaatttatctgcattcagggactaaagtgacaacttctttcctatt 104  Q
    ||||||||||| ||||||||||||||||| ||||||||||||  || ||||||||| ||||||||||||||| ||||| |||||| |||  |||||||||    
T  25149398 tctgcattcagagactaaattgactaacaaagtctacattcagagattattttgcagtttatctgcattcagagactatagtgacgactcatttcctatt 25149497  T
Q  105 cggggactaaagtgactaatctccc 129  Q
    | |||||||||||||||||||||||    
T  25149498 cagggactaaagtgactaatctccc 25149522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 2 - 129
Target Start/End: Complemental strand, 35202720 - 35202593
Alignment:
Q  2 gaatctgcattcagggactaaattgactaacagagtctacattcattgactattttgcaatttatctgcattcagggactaaagtgacaacttctttcct 101  Q
    ||||||||||||||| |||||||||||||||| |||||||||| |  ||| |||||||||||||| ||||||||||||||||| ||| ||||||||||||    
T  35202720 gaatctgcattcaggaactaaattgactaacatagtctacatttaaggaccattttgcaatttatttgcattcagggactaaaatgataacttctttcct 35202621  T
Q  102 attcggggactaaagtgactaatctccc 129  Q
    ||||   ||||||| |||||||||||||    
T  35202620 attcaatgactaaaatgactaatctccc 35202593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 9 - 126
Target Start/End: Complemental strand, 22426961 - 22426845
Alignment:
Q  9 cattcagggactaaattgactaacagagtctacattcattgactattttgcaatttatctgcattcagggactaaagtgacaacttctttcctattcggg 108  Q
    |||||||||||||||||||||||||||| |||||||||  ||||||||||||||||||| ||||||| ||||||||||||  |||  |||||||||| ||    
T  22426961 cattcagggactaaattgactaacagagactacattcagggactattttgcaatttatc-gcattcatggactaaagtgatgactcgtttcctattcagg 22426863  T
Q  109 gactaaagtgactaatct 126  Q
    ||||||||||||||||||    
T  22426862 gactaaagtgactaatct 22426845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 9 - 124
Target Start/End: Original strand, 12106999 - 12107114
Alignment:
Q  9 cattcagggactaaattgactaacagagtctacattcattgactattttgcaatttatctgcattcagggactaaagtgacaacttctttcctattcggg 108  Q
    |||| ||||||||| || | ||||||||||||||||||  || |||||||||||||||||||||||| ||||||||||||| ||||||||||||||  |     
T  12106999 catttagggactaatttaattaacagagtctacattcagggattattttgcaatttatctgcattcaaggactaaagtgacgacttctttcctatttaga 12107098  T
Q  109 gactaaagtgactaat 124  Q
    ||||||||||||||||    
T  12107099 gactaaagtgactaat 12107114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 5 - 126
Target Start/End: Original strand, 41358842 - 41358963
Alignment:
Q  5 tctgcattcagggactaaattgactaacagagtctacattcattgactattttgcaatttatctgcattcagggactaaagtgacaacttctttcctatt 104  Q
    |||||||||| |||||||||||| ||||||||||||||||||  |||||||||||||||||||| |||||| ||| ||||  ||| |||||||| || ||    
T  41358842 tctgcattcatggactaaattgattaacagagtctacattcagggactattttgcaatttatctacattcatggattaaaaggacgacttcttttctttt 41358941  T
Q  105 cggggactaaagtgactaatct 126  Q
    |||| | |||||||||||||||    
T  41358942 cgggaattaaagtgactaatct 41358963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 5 - 129
Target Start/End: Complemental strand, 21184417 - 21184294
Alignment:
Q  5 tctgcattcagggactaaattgactaacagagtctacattcattgactattttgcaatttatctgcattcagggactaaagtgacaacttctttcctatt 104  Q
    |||| |||||||||||||||||||||| | ||| || |||||  |||||||||||||||||||||||||| ||||||| |||||| |||  |||||||||    
T  21184417 tctgtattcagggactaaattgactaata-agtttatattcagggactattttgcaatttatctgcattcggggactagagtgacgactcatttcctatt 21184319  T
Q  105 cggggactaaagtgactaatctccc 129  Q
    | |||||||||||||||||| ||||    
T  21184318 cagggactaaagtgactaatttccc 21184294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 21 - 124
Target Start/End: Complemental strand, 12106970 - 12106867
Alignment:
Q  21 aaattgactaacagagtctacattcattgactattttgcaatttatctgcattcagggactaaagtgacaacttctttcctattcggggactaaagtgac 120  Q
    |||||||| |||||||||||||| ||  |||| ||||||||||| |||||||||||||||||||||||| |||  ||||| |||| ||||||||||||||    
T  12106970 aaattgaccaacagagtctacatccagggactgttttgcaatttctctgcattcagggactaaagtgactactcatttcccattcagggactaaagtgac 12106871  T
Q  121 taat 124  Q
    ||||    
T  12106870 taat 12106867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 5 - 126
Target Start/End: Original strand, 23976251 - 23976370
Alignment:
Q  5 tctgcattcagggactaaattgactaacagagtctacattcattgactattttgcaatttatctgcattcagggactaaagtgacaacttctttcctatt 104  Q
    ||||||||||||| |||||||||||||||||| |||||||||  ||||||||| |||||||||| |||||||| |||||| |||| |||  |||| ||||    
T  23976251 tctgcattcaggggctaaattgactaacagag-ctacattcagggactattttacaatttatctacattcaggaactaaaatgacgactcatttcttatt 23976349  T
Q  105 cggggactaaagtgactaatct 126  Q
     | |||||||||||||||||||    
T  23976350 -gaggactaaagtgactaatct 23976370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 21 - 124
Target Start/End: Complemental strand, 23976194 - 23976090
Alignment:
Q  21 aaattgactaacagagtctacattcattgactattttgcaatttatctgcattcagggactaaagtgacaacttc-tttcctattcggggactaaagtga 119  Q
    ||||||||||||||||||||||||||  |||| ||||||||||| |||||||||||| ||||||||||| ||||| ||| | ||||  ||||||||||||    
T  23976194 aaattgactaacagagtctacattcagggactgttttgcaatttctctgcattcaggaactaaagtgactacttctttttccattcaaggactaaagtga 23976095  T
Q  120 ctaat 124  Q
    |||||    
T  23976094 ctaat 23976090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 10 - 131
Target Start/End: Original strand, 22469597 - 22469718
Alignment:
Q  10 attcagggactaaattgactaacagagtctacattcattgactattttgcaatttatctgcattcagggactaaagtgacaacttctttcctattcgggg 109  Q
    ||||||||| |||||||||||||||| |||||||||    |||||||| ||||||||||||||| | ||||||||||||| |||  |||| |||||   |    
T  22469597 attcagggattaaattgactaacagaatctacattctggaactattttacaatttatctgcatttaaggactaaagtgacgactcatttcttattcatag 22469696  T
Q  110 actaaagtgactaatctcccct 131  Q
    ||||||||||||||||| ||||    
T  22469697 actaaagtgactaatcttccct 22469718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 7 - 126
Target Start/End: Complemental strand, 18324114 - 18323997
Alignment:
Q  7 tgcattcagggactaaattgactaacagagtctacattcattgactattttgcaatttatctgcattcagggactaaagtgacaacttctttcctattcg 106  Q
    |||||||||| |||||||||||||| | ||||||||||||  ||||||||| ||||||||||||||||| | |||||| |||| ||   |||||| |||     
T  18324114 tgcattcaggaactaaattgactaataaagtctacattcagggactattttacaatttatctgcattcatgaactaaaatgacgac--atttcctgttca 18324017  T
Q  107 gggactaaagtgactaatct 126  Q
    | ||||||||||||||||||    
T  18324016 gcgactaaagtgactaatct 18323997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 126
Target Start/End: Original strand, 4289085 - 4289206
Alignment:
Q  5 tctgcattcagggactaaattgactaacagagtctacattcattgactattttgcaatttatctgcattcagggactaaagtgacaacttctttcctatt 104  Q
    |||||||| || ||||||||||||||||| ||||| | ||||  ||||||||||||| ||||||||||||  |||||||| |||| |||||||| |||||    
T  4289085 tctgcatttagagactaaattgactaacatagtctgcgttcaaagactattttgcaacttatctgcattcgtggactaaaatgacgacttcttttctatt 4289184  T
Q  105 cggggactaaagtgactaatct 126  Q
    |  ||||| | |||| ||||||    
T  4289185 caaggactgacgtgattaatct 4289206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 21 - 125
Target Start/End: Complemental strand, 25149341 - 25149237
Alignment:
Q  21 aaattgactaacagagtctacattcattgactattttgcaatttatctgcattcagggactaaagtgacaacttctttcctattcggggactaaagtgac 120  Q
    |||||||| |||||||||||||||||  |||| ||||||||||| | |||||||||||| ||||||||| |||  ||| | |||| ||||||||| ||||    
T  25149341 aaattgaccaacagagtctacattcagggactgttttgcaatttctttgcattcagggattaaagtgactactctttttccattcagggactaaaatgac 25149242  T
Q  121 taatc 125  Q
    |||||    
T  25149241 taatc 25149237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 21 - 135
Target Start/End: Original strand, 18324173 - 18324286
Alignment:
Q  21 aaattgactaacagagtctacattcattgactattttgcaatttatctgcattcagggactaaagtgacaacttctttcctattcggggactaaagtgac 120  Q
    |||||||| | ||||||| |||||||| |||| ||||||||||| ||||||||||||||||||| |||| || ||||||  |||| |||| |||| |||     
T  18324173 aaattgaccagcagagtcgacattcatggactgttttgcaatttctctgcattcagggactaaaatgactacgtctttctcattcagggattaaaatgat 18324272  T
Q  121 taatctccccttatt 135  Q
    |||| ||||||||||    
T  18324273 taat-tccccttatt 18324286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 11 - 104
Target Start/End: Complemental strand, 23625147 - 23625054
Alignment:
Q  11 ttcagggactaaattgactaacagagtctacattcattgactattttgcaatttatctgcattcagggactaaagtgacaacttctttcctatt 104  Q
    |||||||||||||||||| |||||||||| ||||||   |||||||| |||| ||| || ||||||||||||||||||  ||| ||||||||||    
T  23625147 ttcagggactaaattgaccaacagagtctgcattcaggtactattttacaatctatttgtattcagggactaaagtgatgactactttcctatt 23625054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 21 - 124
Target Start/End: Original strand, 21124535 - 21124638
Alignment:
Q  21 aaattgactaacagagtctacattcattgactattttgcaatttatctgcattcagggactaaagtgacaacttctttcctattcggggactaaagtgac 120  Q
    |||||||| |||||||||||||||||  |||| ||||||||||| ||| |||||||| | ||||||||| ||| |||||  ||||  | |||||||||||    
T  21124535 aaattgaccaacagagtctacattcaaggactgttttgcaatttctctacattcaggaattaaagtgactactcctttctcattcaagaactaaagtgac 21124634  T
Q  121 taat 124  Q
    ||||    
T  21124635 taat 21124638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 21 - 124
Target Start/End: Complemental strand, 22469536 - 22469433
Alignment:
Q  21 aaattgactaacagagtctacattcattgactattttgcaatttatctgcattcagggactaaagtgacaacttctttcctattcggggactaaagtgac 120  Q
    |||||||| |||||||||| ||||||  |||| ||||||||||| ||| |||||||| || |||||| | ||| |||||| |||| |||| |||||||||    
T  22469536 aaattgaccaacagagtctgcattcagggactgttttgcaatttctctacattcaggaacgaaagtggctactcctttcccattcagggattaaagtgac 22469437  T
Q  121 taat 124  Q
    ||||    
T  22469436 taat 22469433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 257 - 326
Target Start/End: Original strand, 9655994 - 9656063
Alignment:
Q  257 ttgggattcgaacctcgtaccttgcatatattatgcattatctttaccaacttagctaagttcatgagga 326  Q
    ||||| ||||||||||| ||||||||||| ||||||||| || ||||||||| ||||||| |||||||||    
T  9655994 ttggggttcgaacctcggaccttgcatattttatgcattgtccttaccaactgagctaagctcatgagga 9656063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 3 - 87
Target Start/End: Original strand, 22326564 - 22326648
Alignment:
Q  3 aatctgcattcagggactaaattgactaacagagtctacattcattgactattttgcaatttatctgcattcagggactaaagtg 87  Q
    ||||||||||||| ||||||||||| ||||| | |||| ||| |  || |||||| ||||||||||||||||| |||||||||||    
T  22326564 aatctgcattcagagactaaattgattaacaaaatctatatttaaggattattttacaatttatctgcattcaaggactaaagtg 22326648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 113
Target Start/End: Original strand, 24609186 - 24609294
Alignment:
Q  5 tctgcattcagggactaaattgactaacagagtctacattcattgactattttgcaatttatctgcattcagggactaaagtgacaacttctttcctatt 104  Q
    |||||||| | | ||||||||||||||||||  |||||| ||   |||||||| |||||||| |||||||||| ||||||||||  ||| ||||||||||    
T  24609186 tctgcatttaagaactaaattgactaacagaacctacatccaagaactattttacaatttatttgcattcaggaactaaagtgaagactcctttcctatt 24609285  T
Q  105 cggggacta 113  Q
      |||||||    
T  24609286 tagggacta 24609294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 3 - 126
Target Start/End: Complemental strand, 31254057 - 31253933
Alignment:
Q  3 aatctgcattcagggactaaattgactaacagagtctacattcattgactattttg-caatttatctgcattcagggactaaagtgacaacttctttcct 101  Q
    ||||| |||| |||||||||||||||||||||||||| ||||||  |||||  ||| | |    ||| |||||| ||||||||||||  |||||||||||    
T  31254057 aatctacatttagggactaaattgactaacagagtctgcattcagggactaaattgactaacagtctacattcatggactaaagtgatgacttctttcct 31253958  T
Q  102 attcggggactaaagtgactaatct 126  Q
    |||| | ||||||| ||||||||||    
T  31253957 attcagagactaaaatgactaatct 31253933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 54 - 114
Target Start/End: Complemental strand, 37494385 - 37494325
Alignment:
Q  54 ttttgcaatttatctgcattcagggactaaagtgacaacttctttcctattcggggactaa 114  Q
    |||| |||||| |||||||||||||||||||||||| |||| |||||||||| ||||||||    
T  37494385 ttttacaatttctctgcattcagggactaaagtgactacttatttcctattcagggactaa 37494325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 58
Target Start/End: Original strand, 29585610 - 29585663
Alignment:
Q  5 tctgcattcagggactaaattgactaacagagtctacattcattgactattttg 58  Q
    ||||||||||||||||||||||| ||||| ||||||||||||  ||||||||||    
T  29585610 tctgcattcagggactaaattgaataacaaagtctacattcagggactattttg 29585663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 260 - 316
Target Start/End: Complemental strand, 19778126 - 19778070
Alignment:
Q  260 ggattcgaacctcgtaccttgcatatattatgcattatctttaccaacttagctaag 316  Q
    ||||||||||| || ||||||||||||||||||||| || ||||||||| |||||||    
T  19778126 ggattcgaaccccggaccttgcatatattatgcattgtccttaccaactgagctaag 19778070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 21 - 89
Target Start/End: Original strand, 35202775 - 35202843
Alignment:
Q  21 aaattgactaacagagtctacattcattgactattttgcaatttatctgcattcagggactaaagtgac 89  Q
    |||||||| ||||||||  |||||||  |||| ||||||||||| |||||||||||| |||||||||||    
T  35202775 aaattgaccaacagagtaaacattcagggactgttttgcaatttctctgcattcaggaactaaagtgac 35202843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 277 - 327
Target Start/End: Complemental strand, 23816834 - 23816784
Alignment:
Q  277 cttgcatatattatgcattatctttaccaacttagctaagttcatgaggac 327  Q
    |||||||||||||||||||||| ||||||||| ||||||| ||| ||||||    
T  23816834 cttgcatatattatgcattatccttaccaactgagctaagctcacgaggac 23816784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 266 - 320
Target Start/End: Original strand, 42208475 - 42208529
Alignment:
Q  266 gaacctcgtaccttgcatatattatgcattatctttaccaacttagctaagttca 320  Q
    |||||||| ||||||||||||||||||||| || ||||||||| |||||| ||||    
T  42208475 gaacctcggaccttgcatatattatgcattgtccttaccaactgagctaaattca 42208529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 253 - 298
Target Start/End: Original strand, 7839111 - 7839156
Alignment:
Q  253 gtgtttgggattcgaacctcgtaccttgcatatattatgcattatc 298  Q
    ||||| |||||||||||| | |||||||||||||||||||||||||    
T  7839111 gtgttcgggattcgaaccccataccttgcatatattatgcattatc 7839156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 263 - 315
Target Start/End: Original strand, 11963406 - 11963459
Alignment:
Q  263 ttcgaacctc-gtaccttgcatatattatgcattatctttaccaacttagctaa 315  Q
    |||||||||| | |||||||||||| |||||||| |||||||||||||||||||    
T  11963406 ttcgaacctcagaaccttgcatatactatgcattgtctttaccaacttagctaa 11963459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 266 - 327
Target Start/End: Original strand, 13357447 - 13357508
Alignment:
Q  266 gaacctcgtaccttgcatatattatgcattatctttaccaacttagctaagttcatgaggac 327  Q
    |||||||||||||||||||||||||||||| ||  |||||||| || |||| ||| ||||||    
T  13357447 gaacctcgtaccttgcatatattatgcattgtccataccaactgagttaagctcacgaggac 13357508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 250 - 327
Target Start/End: Original strand, 27750894 - 27750971
Alignment:
Q  250 gtagtgtttgggattcgaacctcgtaccttgcatatattatgcattatctttaccaacttagctaagttcatgaggac 327  Q
    |||||||| | | |||||||| || ||||||||||||||||||| | || ||||||||| ||||||| ||| ||||||    
T  27750894 gtagtgttcgaggttcgaaccccggaccttgcatatattatgcactgtccttaccaactgagctaagctcacgaggac 27750971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 259 - 328
Target Start/End: Complemental strand, 34968616 - 34968548
Alignment:
Q  259 gggattcgaacctcgtaccttgcatatattatgcattatctttaccaacttagctaagttcatgaggacg 328  Q
    |||||||||||| || || |||||||||||||||||||||  |||||||| ||||| ||||| |||||||    
T  34968616 gggattcgaaccccg-actttgcatatattatgcattatccataccaactgagctaggttcacgaggacg 34968548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 263 - 320
Target Start/End: Complemental strand, 44019607 - 44019550
Alignment:
Q  263 ttcgaacctcgtaccttgcatatattatgcattatctttaccaacttagctaagttca 320  Q
    ||||||| ||| ||||||||||||||||||||| |  ||||||||| |||||||||||    
T  44019607 ttcgaacttcggaccttgcatatattatgcattgttcttaccaactgagctaagttca 44019550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 275 - 307
Target Start/End: Original strand, 1200360 - 1200392
Alignment:
Q  275 accttgcatatattatgcattatctttaccaac 307  Q
    |||||||||||||||||||||||||||||||||    
T  1200360 accttgcatatattatgcattatctttaccaac 1200392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 275 - 323
Target Start/End: Original strand, 9055420 - 9055468
Alignment:
Q  275 accttgcatatattatgcattatctttaccaacttagctaagttcatga 323  Q
    |||||||||||||||| |||||| |||| ||||| ||||||||||||||    
T  9055420 accttgcatatattatacattatttttatcaactgagctaagttcatga 9055468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 264 - 316
Target Start/End: Complemental strand, 13477957 - 13477905
Alignment:
Q  264 tcgaacctcgtaccttgcatatattatgcattatctttaccaacttagctaag 316  Q
    |||||||||| || |||||||||||||||||| || ||||||||| |||||||    
T  13477957 tcgaacctcgaacattgcatatattatgcattgtccttaccaactcagctaag 13477905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 263 - 327
Target Start/End: Complemental strand, 32192952 - 32192888
Alignment:
Q  263 ttcgaacctcgtaccttgcatatattatgcattatctttaccaacttagctaagttcatgaggac 327  Q
    |||||||| || ||||||||||||||||||||| ||  |||||||| |||||||| || ||||||    
T  32192952 ttcgaaccccgaaccttgcatatattatgcattgtccataccaactaagctaagtccacgaggac 32192888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 275 - 327
Target Start/End: Original strand, 33451364 - 33451416
Alignment:
Q  275 accttgcatatattatgcattatctttaccaacttagctaagttcatgaggac 327  Q
    ||||||||||||||||||||||||  |||||||| ||||||| ||| ||||||    
T  33451364 accttgcatatattatgcattatccataccaactgagctaagctcacgaggac 33451416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 275 - 327
Target Start/End: Original strand, 37015851 - 37015903
Alignment:
Q  275 accttgcatatattatgcattatctttaccaacttagctaagttcatgaggac 327  Q
    ||||||||||||||||||||| ||| |||||||| ||||||| ||| ||||||    
T  37015851 accttgcatatattatgcattgtctctaccaactgagctaagctcacgaggac 37015903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 315
Target Start/End: Complemental strand, 37938557 - 37938501
Alignment:
Q  259 gggattcgaacctcgtaccttgcatatattatgcattatctttaccaacttagctaa 315  Q
    |||||| |||||||| || |||||||||||||||||||||  |||||||| ||||||    
T  37938557 gggatttgaacctcggactttgcatatattatgcattatccataccaactgagctaa 37938501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 263 - 319
Target Start/End: Original strand, 38282842 - 38282898
Alignment:
Q  263 ttcgaacctcgtaccttgcatatattatgcattatctttaccaacttagctaagttc 319  Q
    ||||||||||| |||||| ||||| |||||||| || ||||||||| ||||||||||    
T  38282842 ttcgaacctcggaccttgtatatactatgcattgtccttaccaactgagctaagttc 38282898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 261 - 308
Target Start/End: Complemental strand, 7679962 - 7679915
Alignment:
Q  261 gattcgaacctcgtaccttgcatatattatgcattatctttaccaact 308  Q
    |||||||||| || ||||||||||||||||||||| ||||| ||||||    
T  7679962 gattcgaaccccgaaccttgcatatattatgcattgtctttgccaact 7679915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 260 - 315
Target Start/End: Complemental strand, 10320557 - 10320502
Alignment:
Q  260 ggattcgaacctcgtaccttgcatatattatgcattatctttaccaacttagctaa 315  Q
    ||||||||||||| |||||| |||||||||||||||||  ||| ||||| ||||||    
T  10320557 ggattcgaacctcataccttacatatattatgcattattcttatcaactgagctaa 10320502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 275 - 326
Target Start/End: Complemental strand, 17704059 - 17704008
Alignment:
Q  275 accttgcatatattatgcattatctttaccaacttagctaagttcatgagga 326  Q
    ||||||||||||||||||||| || ||||||||| ||||||| ||| |||||    
T  17704059 accttgcatatattatgcattgtccttaccaactgagctaagctcacgagga 17704008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 21 - 124
Target Start/End: Original strand, 21185838 - 21185941
Alignment:
Q  21 aaattgactaacagagtctacattcattgactattttgcaatttatctgcattcagggactaaagtgacaacttctttcctattcggggactaaagtgac 120  Q
    |||||||| ||||||||||| ||| |  ||   |||| |||||| || ||||||||||||||||||||| |||  ||||  |||| | ||||||||||||    
T  21185838 aaattgaccaacagagtctatatttagggaacgtttttcaatttttcagcattcagggactaaagtgactactcatttctcattcagcgactaaagtgac 21185937  T
Q  121 taat 124  Q
    ||||    
T  21185938 taat 21185941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 21 - 84
Target Start/End: Complemental strand, 22326509 - 22326446
Alignment:
Q  21 aaattgactaacagagtctacattcattgactattttgcaatttatctgcattcagggactaaa 84  Q
    |||||||| || ||||||||||||||  ||||||||| |||||| || |||||||| |||||||    
T  22326509 aaattgaccaatagagtctacattcaaggactattttacaatttctcagcattcagagactaaa 22326446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 253 - 316
Target Start/End: Complemental strand, 30623361 - 30623298
Alignment:
Q  253 gtgtttgggattcgaacctcgtaccttgcatatattatgcattatctttaccaacttagctaag 316  Q
    ||||| ||| |||||||| |  ||||||||||||||||||||| || ||||||||| |||||||    
T  30623361 gtgttcggggttcgaaccccagaccttgcatatattatgcattgtccttaccaactgagctaag 30623298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 320
Target Start/End: Complemental strand, 3889929 - 3889891
Alignment:
Q  282 atatattatgcattatctttaccaacttagctaagttca 320  Q
    |||||||||||||| |||||||||||| |||||||||||    
T  3889929 atatattatgcattgtctttaccaactaagctaagttca 3889891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 257 - 327
Target Start/End: Original strand, 8984491 - 8984561
Alignment:
Q  257 ttgggattcgaacctcgtaccttgcatatattatgcattatctttaccaacttagctaagttcatgaggac 327  Q
    ||||||||||||| ||  |||||||||||||||| |||||||  |||||||| || |||| ||||| ||||    
T  8984491 ttgggattcgaacatcaaaccttgcatatattatacattatccataccaactgagttaagctcatggggac 8984561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 277 - 327
Target Start/End: Complemental strand, 13286175 - 13286125
Alignment:
Q  277 cttgcatatattatgcattatctttaccaacttagctaagttcatgaggac 327  Q
    ||||||||||||||||||| ||| |||||||| ||||||| ||| ||||||    
T  13286175 cttgcatatattatgcattgtctataccaactgagctaagctcacgaggac 13286125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 261 - 327
Target Start/End: Original strand, 26695306 - 26695372
Alignment:
Q  261 gattcgaacctcgtaccttgcatatattatgcattatctttaccaacttagctaagttcatgaggac 327  Q
    |||| |||| ||| ||||||||||||||||| |||||| ||| ||| | ||||||||||||| ||||    
T  26695306 gattagaacttcgaaccttgcatatattatgtattatccttaacaattgagctaagttcatggggac 26695372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 35
Target Start/End: Original strand, 37494437 - 37494467
Alignment:
Q  5 tctgcattcagggactaaattgactaacaga 35  Q
    |||||||||||||||||||||||||||||||    
T  37494437 tctgcattcagggactaaattgactaacaga 37494467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 320
Target Start/End: Original strand, 1244720 - 1244765
Alignment:
Q  275 accttgcatatattatgcattatctttaccaacttagctaagttca 320  Q
    |||||| |||||||||||||| || ||||||||| |||||||||||    
T  1244720 accttgtatatattatgcattgtccttaccaactgagctaagttca 1244765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 259 - 308
Target Start/End: Complemental strand, 4830070 - 4830021
Alignment:
Q  259 gggattcgaacctcgtaccttgcatatattatgcattatctttaccaact 308  Q
    |||||||||||| || ||||||||||||||||||||| ||  ||||||||    
T  4830070 gggattcgaaccccgaaccttgcatatattatgcattgtccataccaact 4830021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 308
Target Start/End: Original strand, 9019579 - 9019612
Alignment:
Q  275 accttgcatatattatgcattatctttaccaact 308  Q
    ||||||||||||||||||||| ||||||||||||    
T  9019579 accttgcatatattatgcattgtctttaccaact 9019612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 259 - 308
Target Start/End: Complemental strand, 9067144 - 9067095
Alignment:
Q  259 gggattcgaacctcgtaccttgcatatattatgcattatctttaccaact 308  Q
    ||||||||||||||  | |||||||| ||||||||||||| |||||||||    
T  9067144 gggattcgaacctcagatcttgcataaattatgcattatccttaccaact 9067095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 263 - 316
Target Start/End: Original strand, 9635056 - 9635109
Alignment:
Q  263 ttcgaacctcgtaccttgcatatattatgcattatctttaccaacttagctaag 316  Q
    |||||||| || ||||||||| |||||||||||||| |||| |||| |||||||    
T  9635056 ttcgaaccccgaaccttgcatgtattatgcattatccttacaaactgagctaag 9635109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 266 - 327
Target Start/End: Complemental strand, 11709041 - 11708980
Alignment:
Q  266 gaacctcgtaccttgcatatattatgcattatctttaccaacttagctaagttcatgaggac 327  Q
    |||| ||| ||||||||||||||||||||| ||  |||||||| ||||||| ||| ||||||    
T  11709041 gaacttcggaccttgcatatattatgcattgtccctaccaactgagctaagctcacgaggac 11708980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 266 - 327
Target Start/End: Complemental strand, 27587276 - 27587215
Alignment:
Q  266 gaacctcgtaccttgcatatattatgcattatctttaccaacttagctaagttcatgaggac 327  Q
    ||||| || ||||||||||||| ||||||| || ||||||||| ||||||| ||| ||||||    
T  27587276 gaaccccggaccttgcatatatcatgcattgtccttaccaactgagctaagctcacgaggac 27587215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 46
Target Start/End: Original strand, 29585582 - 29585619
Alignment:
Q  9 cattcagggactaaattgactaacagagtctacattca 46  Q
    ||||||||||||||||||||||||| ||||| ||||||    
T  29585582 cattcagggactaaattgactaacaaagtctgcattca 29585619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 320
Target Start/End: Complemental strand, 31888072 - 31888027
Alignment:
Q  275 accttgcatatattatgcattatctttaccaacttagctaagttca 320  Q
    |||||||||||||||| |||| || ||||||||| |||||||||||    
T  31888072 accttgcatatattatccattgtccttaccaactgagctaagttca 31888027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 266 - 327
Target Start/End: Complemental strand, 33743630 - 33743569
Alignment:
Q  266 gaacctcgtaccttgcatatattatgcattatctttaccaacttagctaagttcatgaggac 327  Q
    |||||||| ||||||||||| ||||||||| || | ||||||| ||||| ||||| ||||||    
T  33743630 gaacctcggaccttgcatattttatgcattgtcctcaccaactgagctatgttcacgaggac 33743569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 316
Target Start/End: Original strand, 36018545 - 36018586
Alignment:
Q  275 accttgcatatattatgcattatctttaccaacttagctaag 316  Q
    ||||||||||||||||||||| ||| |||||||| |||||||    
T  36018545 accttgcatatattatgcattgtctctaccaactaagctaag 36018586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 324
Target Start/End: Original strand, 37938745 - 37938794
Alignment:
Q  275 accttgcatatattatgcattatctttaccaacttagctaagttcatgag 324  Q
    ||||||||||||||||||||||||  ||||| || ||||||| |||||||    
T  37938745 accttgcatatattatgcattatccataccagctgagctaagctcatgag 37938794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 274 - 327
Target Start/End: Original strand, 37999434 - 37999487
Alignment:
Q  274 taccttgcatatattatgcattatctttaccaacttagctaagttcatgaggac 327  Q
    |||||||||||||||||||||||||  |||||||| || |||| ||| ||||||    
T  37999434 taccttgcatatattatgcattatccataccaactgagttaagctcacgaggac 37999487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 266 - 307
Target Start/End: Complemental strand, 42700560 - 42700519
Alignment:
Q  266 gaacctcgtaccttgcatatattatgcattatctttaccaac 307  Q
    ||||||| |||||||||||||||||||||| ||| |||||||    
T  42700560 gaacctcataccttgcatatattatgcattgtctctaccaac 42700519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 295
Target Start/End: Complemental strand, 44146782 - 44146749
Alignment:
Q  262 attcgaacctcgtaccttgcatatattatgcatt 295  Q
    |||||||||||| |||||||||||||||||||||    
T  44146782 attcgaacctcgaaccttgcatatattatgcatt 44146749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 275 - 327
Target Start/End: Complemental strand, 11621221 - 11621169
Alignment:
Q  275 accttgcatatattatgcattatctttaccaacttagctaagttcatgaggac 327  Q
    ||||||||||||||||| ||| ||| |||||||||| ||||| ||| ||||||    
T  11621221 accttgcatatattatgtattttctctaccaacttaactaagctcacgaggac 11621169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 266 - 298
Target Start/End: Complemental strand, 18959204 - 18959172
Alignment:
Q  266 gaacctcgtaccttgcatatattatgcattatc 298  Q
    |||||||| ||||||||||||||||||||||||    
T  18959204 gaacctcgaaccttgcatatattatgcattatc 18959172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 259 - 295
Target Start/End: Complemental strand, 21557495 - 21557459
Alignment:
Q  259 gggattcgaacctcgtaccttgcatatattatgcatt 295  Q
    ||||||||||||||| ||||| |||||||||||||||    
T  21557495 gggattcgaacctcggaccttacatatattatgcatt 21557459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 259 - 327
Target Start/End: Complemental strand, 23852973 - 23852905
Alignment:
Q  259 gggattcgaacctcgtaccttgcatatattatgcattatctttaccaacttagctaagttcatgaggac 327  Q
    ||||||| |||| || ||||||||||||||||||||| ||  |||| ||| ||||||| ||| ||||||    
T  23852973 gggattcaaaccacggaccttgcatatattatgcattgtccataccgactgagctaagctcacgaggac 23852905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 260 - 308
Target Start/End: Complemental strand, 29186563 - 29186515
Alignment:
Q  260 ggattcgaacctcgtaccttgcatatattatgcattatctttaccaact 308  Q
    ||||| ||||||| |||||||||||||||| ||||| || |||||||||    
T  29186563 ggatttgaacctcataccttgcatatattacgcattgtccttaccaact 29186515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #75
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 275 - 327
Target Start/End: Complemental strand, 39821930 - 39821878
Alignment:
Q  275 accttgcatatattatgcattatctttaccaacttagctaagttcatgaggac 327  Q
    ||||||||||||||||||||| ||  |||||||| ||||||| ||| ||||||    
T  39821930 accttgcatatattatgcattgtccctaccaactgagctaagctcacgaggac 39821878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #76
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 259 - 323
Target Start/End: Complemental strand, 45396626 - 45396563
Alignment:
Q  259 gggattcgaacctcgtaccttgcatatattatgcattatctttaccaacttagctaagttcatga 323  Q
    ||||||||||| ||  ||||||||||||||||||||| ||  |||||||||| ||||| ||||||    
T  45396626 gggattcgaacttcagaccttgcatatattatgcattgtc-ctaccaacttaactaagctcatga 45396563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 83; Significance: 3e-39; HSPs: 102)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 55382712 - 55382838
Alignment:
Q  1 ggaatctgcattcagggactaaattgactaacagagtctacattcattgactattttgcaatttatctgcattcagggactaaagtgacaacttctttcc 100  Q
    |||||||||||| |||||| ||||||||||||| ||||||||||||  ||||||||||||||||||||||||||||||| ||||||||| |||  |||||    
T  55382712 ggaatctgcatttagggacaaaattgactaacaaagtctacattcagagactattttgcaatttatctgcattcagggattaaagtgacgactcatttcc 55382811  T
Q  101 tattcggggactaaagtgactaatctc 127  Q
    |||||  ||||||||||||||||||||    
T  55382812 tattcaaggactaaagtgactaatctc 55382838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 5 - 129
Target Start/End: Complemental strand, 3370084 - 3369960
Alignment:
Q  5 tctgcattcagggactaaattgactaacagagtctacattcattgactattttgcaatttatctgcattcagggactaaagtgacaacttctttcctatt 104  Q
    |||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||| ||||||| |||||| ||||||||||||||||  |    
T  3370084 tctgcattcagggactaaattgactaacagagtctacatttaatgactattttgcaatttatctggattcaggaactaaaatgacaacttctttcctgct 3369985  T
Q  105 cggggactaaagtgactaatctccc 129  Q
    | || |||||| |||||||| ||||    
T  3369984 caggaactaaaatgactaatttccc 3369960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 5 - 129
Target Start/End: Original strand, 18830734 - 18830854
Alignment:
Q  5 tctgcattcagggactaaattgactaacagagtctacattcattgactattttgcaatttatctgcattcagggactaaagtgacaacttctttcctatt 104  Q
    |||||||||||||||||||| |||||||||| ||||||||||  ||||||||||||||||||||||||||||||||||||||||| | ||||||||||      
T  18830734 tctgcattcagggactaaatggactaacagaatctacattcaaggactattttgcaatttatctgcattcagggactaaagtgacgatttctttccta-- 18830831  T
Q  105 cggggactaaagtgactaatctccc 129  Q
      | |||||||||||||||||||||    
T  18830832 --gagactaaagtgactaatctccc 18830854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 5 - 129
Target Start/End: Original strand, 10380755 - 10380879
Alignment:
Q  5 tctgcattcagggactaaattgactaacagagtctacattcattgactattttgcaatttatctgcattcagggactaaagtgacaacttctttcctatt 104  Q
    |||||||||||||| ||||||||||||||||||||||||| |  ||||||||||||||||||||| |||||||| ||||||| || |||| ||| |||||    
T  10380755 tctgcattcagggattaaattgactaacagagtctacatttagagactattttgcaatttatctgaattcaggggctaaagttacgacttattttctatt 10380854  T
Q  105 cggggactaaagtgactaatctccc 129  Q
    |  ||||||||||||||||||||||    
T  10380855 caaggactaaagtgactaatctccc 10380879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 3 - 104
Target Start/End: Complemental strand, 11821844 - 11821743
Alignment:
Q  3 aatctgcattcagggactaaattgactaacagagtctacattcattgactattttgcaatttatctgcattcagggactaaagtgacaacttctttccta 102  Q
    ||||||||||||||||||||||| ||||||||||||||||||||  ||||||||||||||||||||| ||| | ||||||||||||| ||||||||||||    
T  11821844 aatctgcattcagggactaaattaactaacagagtctacattcaaagactattttgcaatttatctgtatttaaggactaaagtgacgacttctttccta 11821745  T
Q  103 tt 104  Q
    ||    
T  11821744 tt 11821743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 5 - 129
Target Start/End: Original strand, 2634184 - 2634308
Alignment:
Q  5 tctgcattcagggactaaattgactaacagagtctacattcattgactattttgcaatttatctgcattcagggactaaagtgacaacttctttcctatt 104  Q
    ||||||||||||||||||||||||||||||||||||||||||  |||||||| ||||||||||| ||||||| |||||||||||  |||  |||| ||||    
T  2634184 tctgcattcagggactaaattgactaacagagtctacattcagagactatttagcaatttatctacattcagtgactaaagtgaagactcatttcttatt 2634283  T
Q  105 cggggactaaagtgactaatctccc 129  Q
       ||||||||||||||||||||||    
T  2634284 taaggactaaagtgactaatctccc 2634308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 5 - 128
Target Start/End: Original strand, 30470978 - 30471101
Alignment:
Q  5 tctgcattcagggactaaattgactaacagagtctacattcattgactattttgcaatttatctgcattcagggactaaagtgacaacttctttcctatt 104  Q
    ||||||||||||||||||||||| ||||| ||||||||||||  ||||||||| |||||||||| |||||||| ||||||||||| |||  ||| |||||    
T  30470978 tctgcattcagggactaaattgattaacatagtctacattcagggactattttacaatttatctacattcaggaactaaagtgacgactctttttctatt 30471077  T
Q  105 cggggactaaagtgactaatctcc 128  Q
    | | ||||||||||||||||||||    
T  30471078 cagagactaaagtgactaatctcc 30471101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 5 - 125
Target Start/End: Complemental strand, 5448315 - 5448195
Alignment:
Q  5 tctgcattcagggactaaattgactaacagagtctacattcattgactattttgcaatttatctgcattcagggactaaagtgacaacttctttcctatt 104  Q
    ||||||| ||||||||||||||||||||||||| ||||||||  | ||||||| |||||||||||||||||||||||||| |||  ||| ||||||||||    
T  5448315 tctgcatccagggactaaattgactaacagagtttacattcaggggctattttacaatttatctgcattcagggactaaaatgatgactcctttcctatt 5448216  T
Q  105 cggggactaaagtgactaatc 125  Q
    | |||| ||||| ||||||||    
T  5448215 cagggaataaagggactaatc 5448195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 9 - 129
Target Start/End: Original strand, 22018014 - 22018134
Alignment:
Q  9 cattcagggactaaattgactaacagagtctacattcattgactattttgcaatttatctgcattcagggactaaagtgacaacttctttcctattcggg 108  Q
    ||||||| |||||||| |||||||| ||||||||||||  |||||||||||||||||||||||||||| ||| ||| |||| |||  |||||||||  ||    
T  22018014 cattcagagactaaatagactaacatagtctacattcagggactattttgcaatttatctgcattcagagacgaaaatgacgactcatttcctatttagg 22018113  T
Q  109 gactaaagtgactaatctccc 129  Q
    |||||||||||||||||||||    
T  22018114 gactaaagtgactaatctccc 22018134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 5 - 124
Target Start/End: Complemental strand, 9826751 - 9826632
Alignment:
Q  5 tctgcattcagggactaaattgactaacagagtctacattcattgactattttgcaatttatctgcattcagggactaaagtgacaacttctttcctatt 104  Q
    |||||||||||  ||||| |||||||||| ||| ||||||||   |||||||||||||||||||||||||| |||||||||||| || ||||||||||||    
T  9826751 tctgcattcagatactaagttgactaacatagtatacattcagaaactattttgcaatttatctgcattcatggactaaagtgataatttctttcctatt 9826652  T
Q  105 cggggactaaagtgactaat 124  Q
    | ||||| ||||||||||||    
T  9826651 cagggaccaaagtgactaat 9826632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 6 - 129
Target Start/End: Original strand, 47943609 - 47943732
Alignment:
Q  6 ctgcattcagggactaaattgactaacagagtctacattcattgactattttgcaatttatctgcattcagggactaaagtgacaacttctttcctattc 105  Q
    ||||||||| | |||||||||||||||  ||||||||||||  ||||||||||||||||||||||||| | ||||||||||||| |||  ||||||||||    
T  47943609 ctgcattcaagaactaaattgactaaccaagtctacattcagggactattttgcaatttatctgcatttaaggactaaagtgacgactcatttcctattc 47943708  T
Q  106 ggggactaaagtgactaatctccc 129  Q
     |||||||||  ||||||||||||    
T  47943709 agggactaaaacgactaatctccc 47943732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 7 - 126
Target Start/End: Complemental strand, 2063263 - 2063144
Alignment:
Q  7 tgcattcagggactaaattgactaacagagtctacattcattgactattttgcaatttatctgcattcagggactaaagtgacaacttctttcctattcg 106  Q
    ||||||||| ||||||||||||||||| ||| |||||||| ||||||||||  |||||||||||||||| | || |||||| | |||  |||||| |||     
T  2063263 tgcattcagagactaaattgactaacatagtttacattcaatgactattttataatttatctgcattcaagaaccaaagtgccgactcatttcctcttca 2063164  T
Q  107 gggactaaagtgactaatct 126  Q
    ||||||||||||||||||||    
T  2063163 gggactaaagtgactaatct 2063144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 30 - 129
Target Start/End: Complemental strand, 47463908 - 47463809
Alignment:
Q  30 aacagagtctacattcattgactattttgcaatttatctgcattcagggactaaagtgacaacttctttcctattcggggactaaagtgactaatctccc 129  Q
    |||||||||||||||||  |||| |||||||||||||||||||||||||||||||||||| |||  ||||| || | |||||||||||||||||| ||||    
T  47463908 aacagagtctacattcaaagactgttttgcaatttatctgcattcagggactaaagtgactactcatttcccatccagggactaaagtgactaatttccc 47463809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 17 - 126
Target Start/End: Complemental strand, 29908996 - 29908887
Alignment:
Q  17 gactaaattgactaacagagtctacattcattgactattttgcaatttatctgcattcagggactaaagtgacaacttctttcctattcggggactaaag 116  Q
    |||||||||||||||| |||||| |||||||  ||||||||||||||||||||||| ||| |||||||||||| |||  ||||||||||  |||  ||||    
T  29908996 gactaaattgactaacggagtctgcattcatgaactattttgcaatttatctgcatccagtgactaaagtgacgactcatttcctattcaaggatcaaag 29908897  T
Q  117 tgactaatct 126  Q
    ||||||||||    
T  29908896 tgactaatct 29908887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 5 - 126
Target Start/End: Original strand, 37695092 - 37695213
Alignment:
Q  5 tctgcattcagggactaaattgactaacagagtctacattcattgactattttgcaatttatctgcattcagggactaaagtgacaacttctttcctatt 104  Q
    ||||||||||  || |||||||||||||||||||||||||||  || |||||||||||||||||||||||| ||||||||||||  |||  |||||| ||    
T  37695092 tctgcattcaacgattaaattgactaacagagtctacattcagagattattttgcaatttatctgcattcaaggactaaagtgatgactcatttcctttt 37695191  T
Q  105 cggggactaaagtgactaatct 126  Q
    |  | ||||||||||| |||||    
T  37695192 catgaactaaagtgaccaatct 37695213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 5 - 128
Target Start/End: Original strand, 1387502 - 1387626
Alignment:
Q  5 tctgcattcaggg-actaaattgactaacagagtctacattcattgactattttgcaatttatctgcattcagggactaaagtgacaacttctttcctat 103  Q
    ||||||||||||| ||||||||||  |||| | ||||||||||  || |||||| |||||||||||||||||||| ||||| |||  | |||||||||||    
T  1387502 tctgcattcaggggactaaattgatgaacaaaatctacattcagggaatattttacaatttatctgcattcagggcctaaaatgatgatttctttcctat 1387601  T
Q  104 tcggggactaaagtgactaatctcc 128  Q
    || ||||||||||| ||||||||||    
T  1387602 tcagggactaaagtaactaatctcc 1387626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 23 - 124
Target Start/End: Complemental strand, 10757671 - 10757570
Alignment:
Q  23 attgactaacagagtctacattcattgactattttgcaatttatctgcattcagggactaaagtgacaacttctttcctattcggggactaaagtgacta 122  Q
    |||||| |||| ||||||||| ||| |||| ||||||||||||||| |||||||||||||||||||| |||  ||||  |||| ||||||||||||||||    
T  10757671 attgaccaacatagtctacatccatggactgttttgcaatttatctacattcagggactaaagtgactactcatttctcattcagggactaaagtgacta 10757572  T
Q  123 at 124  Q
    ||    
T  10757571 at 10757570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 23 - 124
Target Start/End: Complemental strand, 10970842 - 10970741
Alignment:
Q  23 attgactaacagagtctacattcattgactattttgcaatttatctgcattcagggactaaagtgacaacttctttcctattcggggactaaagtgacta 122  Q
    |||||| |||| ||||||||| ||| |||| ||||||||||||||| |||||||||||||||||||| |||  ||||  |||| ||||||||||||||||    
T  10970842 attgaccaacatagtctacatccatggactgttttgcaatttatctacattcagggactaaagtgactactcatttctcattcagggactaaagtgacta 10970743  T
Q  123 at 124  Q
    ||    
T  10970742 at 10970741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 5 - 89
Target Start/End: Original strand, 18836438 - 18836523
Alignment:
Q  5 tctgcattcagggactaaattgactaacagagtctacattcattgacta-ttttgcaatttatctgcattcagggactaaagtgac 89  Q
    |||||||||||||||||||| |||||||||||||||| ||||  || || ||||||||||| ||||||||||||||||||||||||    
T  18836438 tctgcattcagggactaaatggactaacagagtctacgttcagggattacttttgcaatttttctgcattcagggactaaagtgac 18836523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 21 - 121
Target Start/End: Complemental strand, 22017985 - 22017885
Alignment:
Q  21 aaattgactaacagagtctacattcattgactattttgcaatttatctgcattcagggactaaagtgacaacttctttcctattcggggactaaagtgac 120  Q
    |||||||| |||||| | ||||||||  |||| ||||||||||| |||||||||||||||||||||||| ||| |||||| |||| |||| |||||||||    
T  22017985 aaattgaccaacagaatatacattcagggactgttttgcaatttctctgcattcagggactaaagtgactactcctttcccattcagggattaaagtgac 22017886  T
Q  121 t 121  Q
    |    
T  22017885 t 22017885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 5 - 129
Target Start/End: Complemental strand, 30378861 - 30378738
Alignment:
Q  5 tctgcattcagggactaaattgactaacagagtctacattcattgactattttgcaatttatctgcattcagggactaaagtgacaacttctttcctatt 104  Q
    ||||||||||| |||| |||||||||||||||||| ||||||  |||||||||||||||||| | ||| |||||||||||||||  |||  ||||||| |    
T  30378861 tctgcattcagagactgaattgactaacagagtctgcattcagagactattttgcaatttatttacatccagggactaaagtgatgactcttttcctaat 30378762  T
Q  105 cggggactaaagtgactaatctccc 129  Q
    |  |||| ||||||| |||||||||    
T  30378761 c-aggaccaaagtgattaatctccc 30378738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 253 - 316
Target Start/End: Complemental strand, 38416125 - 38416062
Alignment:
Q  253 gtgtttgggattcgaacctcgtaccttgcatatattatgcattatctttaccaacttagctaag 316  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||| |||||||    
T  38416125 gtgtttgggattcgaacctcataccttgcatatattatgcattatccttaccaactgagctaag 38416062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 21 - 123
Target Start/End: Complemental strand, 5324786 - 5324684
Alignment:
Q  21 aaattgactaacagagtctacattcattgactattttgcaatttatctgcattcagggactaaagtgacaacttctttcctattcggggactaaagtgac 120  Q
    |||||||| |||||||||||||||||  |||| ||||||||||| ||||||| ||| | |||||| ||| ||| |||||  |||| ||||||||||||||    
T  5324786 aaattgaccaacagagtctacattcaaagactgttttgcaatttctctgcatccagaggctaaagcgactactcctttcacattcagggactaaagtgac 5324687  T
Q  121 taa 123  Q
    |||    
T  5324686 taa 5324684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 21 - 94
Target Start/End: Original strand, 3391183 - 3391256
Alignment:
Q  21 aaattgactaacagagtctacattcattgactattttgcaatttatctgcattcagggactaaagtgacaactt 94  Q
    ||||||||||||| |||||||||||| ||| | ||||||||||| ||||||||||| |||||||||||| ||||    
T  3391183 aaattgactaacaaagtctacattcaatgattgttttgcaatttctctgcattcagagactaaagtgactactt 3391256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 259 - 320
Target Start/End: Complemental strand, 31352174 - 31352113
Alignment:
Q  259 gggattcgaacctcgtaccttgcatatattatgcattatctttaccaacttagctaagttca 320  Q
    ||||||||||||||||||||||||||| ||||||||| ||  ||||||||||||||||||||    
T  31352174 gggattcgaacctcgtaccttgcatattttatgcattgtccataccaacttagctaagttca 31352113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 20 - 133
Target Start/End: Complemental strand, 37695004 - 37694892
Alignment:
Q  20 taaattgactaacagagtctacattcattgactattttgcaatttatctgcattcagggactaaagtgacaacttctttcctattcggggactaaagtga 119  Q
    ||||||||| |||| | ||||||||||  |||| ||||||||||| |||||||||||||||||||||||| ||| | |||  | || | |||||||||||    
T  37695004 taaattgaccaacacaatctacattcagggactgttttgcaatttctctgcattcagggactaaagtgactactccattctcactcagtgactaaagtga 37694905  T
Q  120 ctaatctcccctta 133  Q
    ||||| ||||||||    
T  37694904 ctaat-tcccctta 37694892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 21 - 89
Target Start/End: Original strand, 5448372 - 5448440
Alignment:
Q  21 aaattgactaacagagtctacattcattgactattttgcaatttatctgcattcagggactaaagtgac 89  Q
    |||||||| |||||||| ||||||||  |||| ||||||||||| ||||||||||||||||||||||||    
T  5448372 aaattgaccaacagagtttacattcagggactgttttgcaatttctctgcattcagggactaaagtgac 5448440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 21 - 124
Target Start/End: Original strand, 2063322 - 2063425
Alignment:
Q  21 aaattgactaacagagtctacattcattgactattttgcaatttatctgcattcagggactaaagtgacaacttctttcctattcggggactaaagtgac 120  Q
    |||||||| |||||||||||||||||  ||||  |||||||||| |||||| ||| ||| ||||||||| |||  ||||| ||||  |||||||||||||    
T  2063322 aaattgaccaacagagtctacattcagggactgctttgcaatttctctgcaatcaaggattaaagtgactactcatttcccattcaaggactaaagtgac 2063421  T
Q  121 taat 124  Q
    ||||    
T  2063422 taat 2063425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 21 - 124
Target Start/End: Complemental strand, 18830677 - 18830575
Alignment:
Q  21 aaattgactaacagagtctacattcattgactattttgcaatttatctgcattcagggactaaagtgacaacttctttcctattcggggactaaagtgac 120  Q
    |||||||| |||||| ||||||||||  |||| ||| ||||||||||||||| || ||||||||||||| |||  ||||  |||| ||||||||||||||    
T  18830677 aaattgaccaacagaatctacattcagggactgtttagcaatttatctgcatcca-ggactaaagtgactactcatttctcattcagggactaaagtgac 18830579  T
Q  121 taat 124  Q
    ||||    
T  18830578 taat 18830575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 13 - 115
Target Start/End: Original strand, 2232538 - 2232640
Alignment:
Q  13 cagggactaaattgactaacagagtctacattcattgactattttgcaatttatctgcattcagggactaaagtgacaacttctttcctattcggggact 112  Q
    |||||| |||||||||||||| |||||||||| |  ||||||||| |||||||| | |||| ||||||||||||||| | | ||||| |||| | |||||    
T  2232538 cagggattaaattgactaacatagtctacattgaaggactattttacaatttatttacatttagggactaaagtgacgattcctttcttattggaggact 2232637  T
Q  113 aaa 115  Q
    |||    
T  2232638 aaa 2232640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 21 - 125
Target Start/End: Original strand, 9826808 - 9826912
Alignment:
Q  21 aaattgactaacagagtctacattcattgactattttgcaatttatctgcattcagggactaaagtgacaacttctttcctattcggggactaaagtgac 120  Q
    ||||||||||||||||||||| ||||   ||| ||||||||||| |||||||||| | ||| ||||||| |||  ||||  |||| || |||||||||||    
T  9826808 aaattgactaacagagtctacgttcaagcactgttttgcaatttctctgcattcaagtacttaagtgactactcttttctgattcaggaactaaagtgac 9826907  T
Q  121 taatc 125  Q
    |||||    
T  9826908 taatc 9826912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 275 - 328
Target Start/End: Original strand, 11144680 - 11144733
Alignment:
Q  275 accttgcatatattatgcattatctttaccaacttagctaagttcatgaggacg 328  Q
    ||||||||||||||||||||| |||||| ||||| || ||||||||||||||||    
T  11144680 accttgcatatattatgcattgtctttatcaactgaggtaagttcatgaggacg 11144733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 55 - 124
Target Start/End: Original strand, 30378948 - 30379017
Alignment:
Q  55 tttgcaatttatctgcattcagggactaaagtgacaacttctttcctattcggggactaaagtgactaat 124  Q
    |||||||||| |||||||| ||||||||||||||| |||  |||||||||  | ||||||||||||||||    
T  30378948 tttgcaatttctctgcattaagggactaaagtgactactcatttcctatttagagactaaagtgactaat 30379017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 259 - 308
Target Start/End: Original strand, 42316823 - 42316872
Alignment:
Q  259 gggattcgaacctcgtaccttgcatatattatgcattatctttaccaact 308  Q
    ||||||||||||||| ||||||||||||||||||| | ||||||||||||    
T  42316823 gggattcgaacctcggaccttgcatatattatgcactgtctttaccaact 42316872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 72 - 129
Target Start/End: Original strand, 47463916 - 47463973
Alignment:
Q  72 ttcagggactaaagtgacaacttctttcctattcggggactaaagtgactaatctccc 129  Q
    |||||||||||||||||| |||  |||||||||| || ||||||||||||||||||||    
T  47463916 ttcagggactaaagtgacgactcatttcctattcaggaactaaagtgactaatctccc 47463973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 10 - 46
Target Start/End: Complemental strand, 18500744 - 18500708
Alignment:
Q  10 attcagggactaaattgactaacagagtctacattca 46  Q
    |||||||||||||||||||||||||||||||||||||    
T  18500744 attcagggactaaattgactaacagagtctacattca 18500708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 259 - 315
Target Start/End: Original strand, 21052556 - 21052612
Alignment:
Q  259 gggattcgaacctcgtaccttgcatatattatgcattatctttaccaacttagctaa 315  Q
    |||||||||||||| |||||||||||||||||| ||||||  |||||||| ||||||    
T  21052556 gggattcgaacctcataccttgcatatattatgtattatccataccaactgagctaa 21052612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 128
Target Start/End: Original strand, 8951152 - 8951271
Alignment:
Q  9 cattcagggactaaattgactaacagagtctacattcattgactattttgcaatttatctgcattcagggactaaagtgacaacttctttcctattcggg 108  Q
    |||| ||| |||||||||||||||| | ||||||||||   |||||||| | ||||||||  ||||||| ||||| ||||| | | ||||||||||   |    
T  8951152 cattaaggaactaaattgactaacaaaatctacattcaggaactattttaccatttatctatattcaggaactaatgtgacgattcctttcctattgatg 8951251  T
Q  109 gactaaagtgactaatctcc 128  Q
    ||||||| | ||||||||||    
T  8951252 gactaaattaactaatctcc 8951271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 253 - 316
Target Start/End: Complemental strand, 25978385 - 25978323
Alignment:
Q  253 gtgtttgggattcgaacctcgtaccttgcatatattatgcattatctttaccaacttagctaag 316  Q
    |||| |||||||||||||||| ||||||||||||||||||||| || ||| ||||| |||||||    
T  25978385 gtgtctgggattcgaacctcggaccttgcatatattatgcattgtcctta-caactgagctaag 25978323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 264 - 327
Target Start/End: Original strand, 46676502 - 46676565
Alignment:
Q  264 tcgaacctcgtaccttgcatatattatgcattatctttaccaacttagctaagttcatgaggac 327  Q
    ||||||| || ||||||||||||||||||||| || ||||||||| ||||||| ||||| ||||    
T  46676502 tcgaaccccggaccttgcatatattatgcattgtccttaccaactgagctaagctcatggggac 46676565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 86
Target Start/End: Complemental strand, 8951124 - 8951058
Alignment:
Q  20 taaattgactaacagagtctacattcattgactattttgcaatttatctgcattcagggactaaagt 86  Q
    ||||||||| ||| |||||||||||||  |||| ||||||||||| | | |||||||||||||||||    
T  8951124 taaattgaccaactgagtctacattcaaagactgttttgcaatttctttacattcagggactaaagt 8951058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 53
Target Start/End: Complemental strand, 11821900 - 11821858
Alignment:
Q  11 ttcagggactaaattgactaacagagtctacattcattgacta 53  Q
    ||||||||||||| ||||||||||||||||||||||| |||||    
T  11821900 ttcagggactaaagtgactaacagagtctacattcatagacta 11821858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 53
Target Start/End: Original strand, 30470920 - 30470962
Alignment:
Q  11 ttcagggactaaattgactaacagagtctacattcattgacta 53  Q
    ||||||||||||| |||||||||||||||||||||| ||||||    
T  30470920 ttcagggactaaagtgactaacagagtctacattcaatgacta 30470962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 266 - 316
Target Start/End: Original strand, 56551598 - 56551648
Alignment:
Q  266 gaacctcgtaccttgcatatattatgcattatctttaccaacttagctaag 316  Q
    |||||||| ||||||||||||||||||||| || ||||||||| |||||||    
T  56551598 gaacctcggaccttgcatatattatgcattgtccttaccaactgagctaag 56551648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 275 - 316
Target Start/End: Complemental strand, 6087793 - 6087752
Alignment:
Q  275 accttgcatatattatgcattatctttaccaacttagctaag 316  Q
    ||||||||||||||||||||||||| |||||||| |||||||    
T  6087793 accttgcatatattatgcattatctataccaactgagctaag 6087752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 266 - 327
Target Start/End: Complemental strand, 7230335 - 7230274
Alignment:
Q  266 gaacctcgtaccttgcatatattatgcattatctttaccaacttagctaagttcatgaggac 327  Q
    ||||| || ||||||||||||||||||||| || ||||||||| ||||||| ||| ||||||    
T  7230335 gaaccccggaccttgcatatattatgcattgtccttaccaactgagctaagctcacgaggac 7230274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 266 - 327
Target Start/End: Original strand, 11949769 - 11949830
Alignment:
Q  266 gaacctcgtaccttgcatatattatgcattatctttaccaacttagctaagttcatgaggac 327  Q
    ||||| || ||||||||||||||||||||| ||  |||||||| ||||||| ||||||||||    
T  11949769 gaaccccggaccttgcatatattatgcattgtccataccaactgagctaagctcatgaggac 11949830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 263 - 328
Target Start/End: Complemental strand, 12058377 - 12058312
Alignment:
Q  263 ttcgaacctcgtaccttgcatatattatgcattatctttaccaacttagctaagttcatgaggacg 328  Q
    ||||||||| | |||||||||||||||||||||||| ||||| ||| ||||||  ||||| |||||    
T  12058377 ttcgaaccttgaaccttgcatatattatgcattatccttaccgactgagctaaactcatggggacg 12058312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 263 - 308
Target Start/End: Complemental strand, 19908750 - 19908705
Alignment:
Q  263 ttcgaacctcgtaccttgcatatattatgcattatctttaccaact 308  Q
    ||||||||||| ||||||||||||||||||||| || |||||||||    
T  19908750 ttcgaacctcggaccttgcatatattatgcattgtccttaccaact 19908705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 258 - 327
Target Start/End: Complemental strand, 49473708 - 49473639
Alignment:
Q  258 tgggattcgaacctcgtaccttgcatatattatgcattatctttaccaacttagctaagttcatgaggac 327  Q
    |||| |||||||| || ||||||||||||||||||||| || |||||||||  |||||| ||| ||||||    
T  49473708 tggggttcgaaccccggaccttgcatatattatgcattgtccttaccaactgggctaagctcacgaggac 49473639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 275 - 323
Target Start/End: Complemental strand, 12439710 - 12439662
Alignment:
Q  275 accttgcatatattatgcattatctttaccaacttagctaagttcatga 323  Q
    ||||||||||||||||||||| || ||| ||||| ||||||||||||||    
T  12439710 accttgcatatattatgcattgtccttatcaactgagctaagttcatga 12439662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 60 - 124
Target Start/End: Complemental strand, 18836344 - 18836280
Alignment:
Q  60 aatttatctgcattcagggactaaagtgacaacttctttcctattcggggactaaagtgactaat 124  Q
    |||||||||||||||||||||||||||||| |||  ||||  |||| ||||| ||| ||||||||    
T  18836344 aatttatctgcattcagggactaaagtgactactcatttctcattcagggacaaaaatgactaat 18836280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 263 - 327
Target Start/End: Original strand, 24664994 - 24665058
Alignment:
Q  263 ttcgaacctcgtaccttgcatatattatgcattatctttaccaacttagctaagttcatgaggac 327  Q
    |||||||| || ||||||||||||||||||||| ||  |||||||| ||||||| ||| ||||||    
T  24664994 ttcgaaccccggaccttgcatatattatgcattctccataccaactgagctaagctcacgaggac 24665058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 263 - 327
Target Start/End: Complemental strand, 36479049 - 36478985
Alignment:
Q  263 ttcgaacctcgtaccttgcatatattatgcattatctttaccaacttagctaagttcatgaggac 327  Q
    ||||||||||| ||||| ||||||||||||||| ||  |||||||  ||||||| ||||||||||    
T  36479049 ttcgaacctcgaaccttacatatattatgcattgtccataccaacagagctaagctcatgaggac 36478985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 275 - 327
Target Start/End: Complemental strand, 48473007 - 48472955
Alignment:
Q  275 accttgcatatattatgcattatctttaccaacttagctaagttcatgaggac 327  Q
    |||||||| ||||||||||||||||||| ||||| || |||||||| ||||||    
T  48473007 accttgcaaatattatgcattatctttatcaactgagttaagttcacgaggac 48472955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 315
Target Start/End: Complemental strand, 53190357 - 53190301
Alignment:
Q  259 gggattcgaacctcgtaccttgcatatattatgcattatctttaccaacttagctaa 315  Q
    ||||||||||||  | ||||||||||||||||||||||||  |||||||| ||||||    
T  53190357 gggattcgaaccctggaccttgcatatattatgcattatccataccaactgagctaa 53190301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 21 - 124
Target Start/End: Complemental strand, 2634127 - 2634024
Alignment:
Q  21 aaattgactaacagagtctacattcattgactattttgcaatttatctgcattcagggactaaagtgacaacttctttcctattcggggactaaagtgac 120  Q
    |||||||| || | ||||||||||||  |||| ||||||||||| || |||||| | | |||||||||| |||  ||||  ||||  |||||||||||||    
T  2634127 aaattgaccaataaagtctacattcagggactgttttgcaatttctcagcattcggcggctaaagtgactactcttttctcattcatggactaaagtgac 2634028  T
Q  121 taat 124  Q
    ||||    
T  2634027 taat 2634024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 260 - 327
Target Start/End: Complemental strand, 36203297 - 36203230
Alignment:
Q  260 ggattcgaacctcgtaccttgcatatattatgcattatctttaccaacttagctaagttcatgaggac 327  Q
    |||||| || |||| ||||||||||||||||||||| || ||| ||||| ||||||| ||| ||||||    
T  36203297 ggattcaaatctcggaccttgcatatattatgcattgtccttatcaactgagctaagctcacgaggac 36203230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 261 - 320
Target Start/End: Original strand, 42756107 - 42756166
Alignment:
Q  261 gattcgaacctcgtaccttgcatatattatgcattatctttaccaacttagctaagttca 320  Q
    |||||||| | || ||||||||||||||||||||| || ||| ||||| |||||||||||    
T  42756107 gattcgaatcccgaaccttgcatatattatgcattgtccttatcaactgagctaagttca 42756166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 275 - 318
Target Start/End: Original strand, 43782320 - 43782363
Alignment:
Q  275 accttgcatatattatgcattatctttaccaacttagctaagtt 318  Q
    ||||||||||||||||||||| || ||||||||| |||||||||    
T  43782320 accttgcatatattatgcattgtcattaccaactgagctaagtt 43782363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 253 - 316
Target Start/End: Original strand, 50442741 - 50442803
Alignment:
Q  253 gtgtttgggattcgaacctcgtaccttgcatatattatgcattatctttaccaacttagctaag 316  Q
    |||| |||||||||||||  | ||||||||||||||||||||||||  |||||||| |||||||    
T  50442741 gtgtctgggattcgaacccag-accttgcatatattatgcattatccctaccaactgagctaag 50442803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 260 - 327
Target Start/End: Complemental strand, 51002348 - 51002281
Alignment:
Q  260 ggattcgaacctcgtaccttgcatatattatgcattatctttaccaacttagctaagttcatgaggac 327  Q
    |||||||||||||  ||||||||||| ||||||||| ||| |||||||| || |||| ||| ||||||    
T  51002348 ggattcgaacctcaaaccttgcatattttatgcattgtctataccaactgagttaagctcacgaggac 51002281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 262 - 316
Target Start/End: Original strand, 470320 - 470374
Alignment:
Q  262 attcgaacctcgtaccttgcatatattatgcattatctttaccaacttagctaag 316  Q
    ||||||||||| ||| || |||||||||| ||||||||||| ||||| |||||||    
T  470320 attcgaacctcatactttacatatattatacattatctttatcaactgagctaag 470374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 47
Target Start/End: Original strand, 5324815 - 5324853
Alignment:
Q  9 cattcagggactaaattgactaacagagtctacattcat 47  Q
    |||||| |||||||||||||||||||||||| |||||||    
T  5324815 cattcaaggactaaattgactaacagagtctgcattcat 5324853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 253 - 327
Target Start/End: Original strand, 7967618 - 7967692
Alignment:
Q  253 gtgtttgggattcgaacctcgtaccttgcatatattatgcattatctttaccaacttagctaagttcatgaggac 327  Q
    |||| ||||||||||| | |  || |||||||||||||||||||||||||| |||| || |||| ||| ||||||    
T  7967618 gtgtctgggattcgaatcccagactttgcatatattatgcattatctttacgaactaagttaagctcacgaggac 7967692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 277 - 315
Target Start/End: Original strand, 8027414 - 8027452
Alignment:
Q  277 cttgcatatattatgcattatctttaccaacttagctaa 315  Q
    |||||||||||||||||||||| ||||||||| ||||||    
T  8027414 cttgcatatattatgcattatccttaccaactgagctaa 8027452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 277 - 327
Target Start/End: Complemental strand, 8495031 - 8494981
Alignment:
Q  277 cttgcatatattatgcattatctttaccaacttagctaagttcatgaggac 327  Q
    ||||||||||||||||||| ||  |||||||| ||||||||||| ||||||    
T  8495031 cttgcatatattatgcattgtccctaccaactgagctaagttcacgaggac 8494981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 266 - 328
Target Start/End: Original strand, 16733525 - 16733587
Alignment:
Q  266 gaacctcgtaccttgcatatattatgcattatctttaccaacttagctaagttcatgaggacg 328  Q
    |||||||| | |||||||||||||| ||||||||||| ||||| || |||| ||| |||||||    
T  16733525 gaacctcggatcttgcatatattatacattatctttatcaactgagttaagctcacgaggacg 16733587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 266 - 328
Target Start/End: Complemental strand, 41521009 - 41520947
Alignment:
Q  266 gaacctcgtaccttgcatatattatgcattatctttaccaacttagctaagttcatgaggacg 328  Q
    |||||| | ||||||||||||||||||||| ||| |||||||| || |||| | |||||||||    
T  41521009 gaaccttgaaccttgcatatattatgcattgtctctaccaactgagttaagcttatgaggacg 41520947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 278 - 320
Target Start/End: Original strand, 46409499 - 46409541
Alignment:
Q  278 ttgcatatattatgcattatctttaccaacttagctaagttca 320  Q
    |||||||||||||||||| |||||||||||| || ||||||||    
T  46409499 ttgcatatattatgcattgtctttaccaactgagttaagttca 46409541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 275 - 317
Target Start/End: Complemental strand, 49949380 - 49949338
Alignment:
Q  275 accttgcatatattatgcattatctttaccaacttagctaagt 317  Q
    ||||||||||||||||||||| || ||||||||| ||||||||    
T  49949380 accttgcatatattatgcattgtccttaccaactgagctaagt 49949338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 46
Target Start/End: Original strand, 1387474 - 1387511
Alignment:
Q  9 cattcagggactaaattgactaacagagtctacattca 46  Q
    ||||||| ||||||||||||||||||||||| ||||||    
T  1387474 cattcagcgactaaattgactaacagagtctgcattca 1387511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 46
Target Start/End: Original strand, 2634156 - 2634193
Alignment:
Q  9 cattcagggactaaattgactaacagagtctacattca 46  Q
    |||||||||||||||||||| |||||||||| ||||||    
T  2634156 cattcagggactaaattgacgaacagagtctgcattca 2634193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 66
Target Start/End: Original strand, 5324843 - 5324904
Alignment:
Q  5 tctgcattcagggactaaattgactaacagagtctacattcattgactattttgcaatttat 66  Q
    |||||||||| | |||||||||||||||||||||| || |||   |||||||| ||||||||    
T  5324843 tctgcattcatgaactaaattgactaacagagtctgcaatcagaaactattttacaatttat 5324904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 263 - 308
Target Start/End: Complemental strand, 6520129 - 6520084
Alignment:
Q  263 ttcgaacctcgtaccttgcatatattatgcattatctttaccaact 308  Q
    ||||||||||  ||||||||||||||||||||| ||||||| ||||    
T  6520129 ttcgaacctcaaaccttgcatatattatgcattgtctttactaact 6520084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 46
Target Start/End: Original strand, 10757702 - 10757739
Alignment:
Q  9 cattcagggactaaattgactaacagagtctacattca 46  Q
    |||||||||||||||||||||||| |||||| ||||||    
T  10757702 cattcagggactaaattgactaacggagtctgcattca 10757739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 46
Target Start/End: Original strand, 10970873 - 10970910
Alignment:
Q  9 cattcagggactaaattgactaacagagtctacattca 46  Q
    |||||||||||||||||||||||| |||||| ||||||    
T  10970873 cattcagggactaaattgactaacggagtctgcattca 10970910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 46
Target Start/End: Original strand, 12140799 - 12140836
Alignment:
Q  9 cattcagggactaaattgactaacagagtctacattca 46  Q
    |||||| ||||||||||||||||| |||||||||||||    
T  12140799 cattcaaggactaaattgactaacggagtctacattca 12140836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 277 - 326
Target Start/End: Original strand, 16054554 - 16054603
Alignment:
Q  277 cttgcatatattatgcattatctttaccaacttagctaagttcatgagga 326  Q
    ||||||||||||||||||||||| || ||||| ||||||| ||| |||||    
T  16054554 cttgcatatattatgcattatctctaacaactaagctaagctcacgagga 16054603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 266 - 327
Target Start/End: Original strand, 20799400 - 20799461
Alignment:
Q  266 gaacctcgtaccttgcatatattatgcattatctttaccaacttagctaagttcatgaggac 327  Q
    ||||| || ||||||||||||||||||||| ||  |||||||| ||||||| ||| ||||||    
T  20799400 gaaccccggaccttgcatatattatgcattgtccctaccaactgagctaagctcacgaggac 20799461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 316
Target Start/End: Original strand, 21317353 - 21317394
Alignment:
Q  275 accttgcatatattatgcattatctttaccaacttagctaag 316  Q
    ||||||||||||||||||||| ||| |||||||| |||||||    
T  21317353 accttgcatatattatgcattgtctctaccaactgagctaag 21317394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 277 - 322
Target Start/End: Original strand, 22279537 - 22279582
Alignment:
Q  277 cttgcatatattatgcattatctttaccaacttagctaagttcatg 322  Q
    ||||||||||||||||||| || ||||||||| ||||||| |||||    
T  22279537 cttgcatatattatgcattgtccttaccaactgagctaagctcatg 22279582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 257 - 326
Target Start/End: Complemental strand, 23775582 - 23775513
Alignment:
Q  257 ttgggattcgaacctcgtaccttgcatatattatgcattatctttaccaacttagctaagttcatgagga 326  Q
    ||||| ||||||||  | ||||||||||||||||||||| ||  ||||||||  |||||| |||||||||    
T  23775582 ttggggttcgaaccctggaccttgcatatattatgcattgtccctaccaactgtgctaagctcatgagga 23775513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 46
Target Start/End: Original strand, 37695060 - 37695101
Alignment:
Q  5 tctgcattcagggactaaattgactaacagagtctacattca 46  Q
    |||||||| ||||| |||||||||||||||||||| ||||||    
T  37695060 tctgcatttagggattaaattgactaacagagtctgcattca 37695101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 259 - 316
Target Start/End: Complemental strand, 43027354 - 43027297
Alignment:
Q  259 gggattcgaacctcgtaccttgcatatattatgcattatctttaccaacttagctaag 316  Q
    ||||||||||||  | ||||||||||||||||||||||||  |||||| | |||||||    
T  43027354 gggattcgaaccatgaaccttgcatatattatgcattatcactaccaattgagctaag 43027297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 278 - 327
Target Start/End: Complemental strand, 53142649 - 53142600
Alignment:
Q  278 ttgcatatattatgcattatctttaccaacttagctaagttcatgaggac 327  Q
    |||||||||||||||||||||| || ||||| | ||||| ||||||||||    
T  53142649 ttgcatatattatgcattatctatagcaactgaactaagctcatgaggac 53142600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 259 - 316
Target Start/End: Original strand, 56497607 - 56497664
Alignment:
Q  259 gggattcgaacctcgtaccttgcatatattatgcattatctttaccaacttagctaag 316  Q
    |||||||||||| |  ||||||||||||||||||||| || ||||||| | |||||||    
T  56497607 gggattcgaaccccagaccttgcatatattatgcattgtccttaccaattgagctaag 56497664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 263 - 295
Target Start/End: Complemental strand, 1701667 - 1701635
Alignment:
Q  263 ttcgaacctcgtaccttgcatatattatgcatt 295  Q
    ||||||||||| |||||||||||||||||||||    
T  1701667 ttcgaacctcggaccttgcatatattatgcatt 1701635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 275 - 327
Target Start/End: Original strand, 2186348 - 2186400
Alignment:
Q  275 accttgcatatattatgcattatctttaccaacttagctaagttcatgaggac 327  Q
    ||||||||||||||||||||| ||  |||||||| ||||||| ||| ||||||    
T  2186348 accttgcatatattatgcattgtccataccaactgagctaagctcacgaggac 2186400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 264 - 316
Target Start/End: Original strand, 6789430 - 6789482
Alignment:
Q  264 tcgaacctcgtaccttgcatatattatgcattatctttaccaacttagctaag 316  Q
    ||||||| || |||||||||||| |||||||| || ||||||||| |||||||    
T  6789430 tcgaaccccggaccttgcatatactatgcattgtccttaccaactgagctaag 6789482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 262 - 306
Target Start/End: Complemental strand, 10006399 - 10006355
Alignment:
Q  262 attcgaacctcgtaccttgcatatattatgcattatctttaccaa 306  Q
    ||||||||| |  ||||||||||||||||||||| ||||||||||    
T  10006399 attcgaaccccagaccttgcatatattatgcattgtctttaccaa 10006355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 275 - 327
Target Start/End: Original strand, 11286796 - 11286848
Alignment:
Q  275 accttgcatatattatgcattatctttaccaacttagctaagttcatgaggac 327  Q
    ||||||||||||||||||||| ||| |||||||| | ||||| ||| ||||||    
T  11286796 accttgcatatattatgcattgtctctaccaactgaactaagctcaggaggac 11286848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #93
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 54 - 86
Target Start/End: Original strand, 11821936 - 11821968
Alignment:
Q  54 ttttgcaatttatctgcattcagggactaaagt 86  Q
    ||||||||||| |||||||||||||||||||||    
T  11821936 ttttgcaatttctctgcattcagggactaaagt 11821968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #94
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 275 - 327
Target Start/End: Complemental strand, 13121590 - 13121538
Alignment:
Q  275 accttgcatatattatgcattatctttaccaacttagctaagttcatgaggac 327  Q
    ||||||||||||||||||||| ||  |||||||| ||||||| ||| ||||||    
T  13121590 accttgcatatattatgcattgtccctaccaactaagctaagctcacgaggac 13121538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #95
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 275 - 327
Target Start/End: Complemental strand, 16740445 - 16740393
Alignment:
Q  275 accttgcatatattatgcattatctttaccaacttagctaagttcatgaggac 327  Q
    ||||||||||| ||||||||| |||  ||||||| ||||||||||| ||||||    
T  16740445 accttgcatattttatgcattgtctcaaccaactaagctaagttcacgaggac 16740393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #96
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 259 - 315
Target Start/End: Original strand, 18915045 - 18915101
Alignment:
Q  259 gggattcgaacctcgtaccttgcatatattatgcattatctttaccaacttagctaa 315  Q
    |||||||||||| || ||| || |||||||||||||| || ||||||||| ||||||    
T  18915045 gggattcgaaccccggaccatgaatatattatgcattgtccttaccaactgagctaa 18915101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #97
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 46
Target Start/End: Complemental strand, 30378888 - 30378852
Alignment:
Q  10 attcagggactaaattgactaacagagtctacattca 46  Q
    ||||||||||| |||||||||||||||||| ||||||    
T  30378888 attcagggactgaattgactaacagagtctgcattca 30378852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #98
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 275 - 315
Target Start/End: Complemental strand, 34247486 - 34247446
Alignment:
Q  275 accttgcatatattatgcattatctttaccaacttagctaa 315  Q
    ||||||||||||||||||||| || ||||||||| ||||||    
T  34247486 accttgcatatattatgcattgtccttaccaactgagctaa 34247446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #99
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 46
Target Start/End: Complemental strand, 47144803 - 47144767
Alignment:
Q  10 attcagggactaaattgactaacagagtctacattca 46  Q
    ||||| ||||||||||||||||| |||||||||||||    
T  47144803 attcaaggactaaattgactaactgagtctacattca 47144767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #100
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 275 - 315
Target Start/End: Original strand, 48643276 - 48643316
Alignment:
Q  275 accttgcatatattatgcattatctttaccaacttagctaa 315  Q
    ||||| ||||||||||||||||||| |||||||| ||||||    
T  48643276 accttacatatattatgcattatctctaccaactaagctaa 48643316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #101
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 275 - 327
Target Start/End: Original strand, 50362154 - 50362206
Alignment:
Q  275 accttgcatatattatgcattatctttaccaacttagctaagttcatgaggac 327  Q
    ||||||||||||||||||||| ||  |||||||| ||||||| ||| ||||||    
T  50362154 accttgcatatattatgcattgtccctaccaactgagctaagctcacgaggac 50362206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #102
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 275 - 327
Target Start/End: Original strand, 52270045 - 52270097
Alignment:
Q  275 accttgcatatattatgcattatctttaccaacttagctaagttcatgaggac 327  Q
    ||||||||||||||||||||| ||  |||||||| ||||||| ||| ||||||    
T  52270045 accttgcatatattatgcattgtccataccaactgagctaagctcacgaggac 52270097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 81; Significance: 5e-38; HSPs: 60)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 5 - 125
Target Start/End: Complemental strand, 27508695 - 27508576
Alignment:
Q  5 tctgcattcagggactaaattgactaacagagtctacattcattgactattttgcaatttatctgcattcagggactaaagtgacaacttctttcctatt 104  Q
    ||||||||||||||||||||||||||||| ||||||||||||  ||||||||||||||||||||||||||||||||||||||||  |||  |||||||||    
T  27508695 tctgcattcagggactaaattgactaacatagtctacattcagggactattttgcaatttatctgcattcagggactaaagtgatgactcatttcctatt 27508596  T
Q  105 cggggactaaagtgactaatc 125  Q
    | |||||| ||||||||||||    
T  27508595 cagggact-aagtgactaatc 27508576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 5 - 130
Target Start/End: Original strand, 5080269 - 5080394
Alignment:
Q  5 tctgcattcagggactaaattgactaacagagtctacattcattgactattttgcaatttatctgcattcagggactaaagtgacaacttctttcctatt 104  Q
    ||||||||||||||||||||||||||| | ||| ||||||||  ||||||||| |||||||||||||||||||||||||| | || ||||||||||||||    
T  5080269 tctgcattcagggactaaattgactaatatagtttacattcagagactattttacaatttatctgcattcagggactaaaataacgacttctttcctatt 5080368  T
Q  105 cggggactaaagtgactaatctcccc 130  Q
    | | |||||||||||||||| |||||    
T  5080369 cagagactaaagtgactaatttcccc 5080394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 5 - 129
Target Start/End: Original strand, 38761152 - 38761276
Alignment:
Q  5 tctgcattcagggactaaattgactaacagagtctacattcattgactattttgcaatttatctgcattcagggactaaagtgacaacttctttcctatt 104  Q
    |||||||||  |||||||||||| ||||| ||||||||||||  ||||||||||||||||||||||||||||||||||||||||  |||  |||||||||    
T  38761152 tctgcattcgaggactaaattgattaacaaagtctacattcagggactattttgcaatttatctgcattcagggactaaagtgatgactcatttcctatt 38761251  T
Q  105 cggggactaaagtgactaatctccc 129  Q
    | ||||||||||||| |||||||||    
T  38761252 cagggactaaagtgattaatctccc 38761276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 9 - 128
Target Start/End: Complemental strand, 15000761 - 15000641
Alignment:
Q  9 cattcagggactaaattgactaacagagtctacattcattgactattttgcaatttatctgcattcagggactaaagtgacaacttctttcctattcggg 108  Q
    |||||| |||||||| ||||||||| | |||||||||   || |||||||||||||||||||||||||||||||||||||||| | ||||||||||| ||    
T  15000761 cattcaaggactaaactgactaacataatctacattctgagaatattttgcaatttatctgcattcagggactaaagtgacaattcctttcctattcagg 15000662  T
Q  109 ga-ctaaagtgactaatctcc 128  Q
    || ||||||||||||||||||    
T  15000661 gacctaaagtgactaatctcc 15000641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 6 - 129
Target Start/End: Complemental strand, 3404576 - 3404453
Alignment:
Q  6 ctgcattcagggactaaattgactaacagagtctacattcattgactattttgcaatttatctgcattcagggactaaagtgacaacttctttcctattc 105  Q
    ||||||| |||||||||||||||||||||||| ||||||||| ||||| |||||||||||||||| || ||| |||||| |||| | |||||| ||||||    
T  3404576 ctgcatttagggactaaattgactaacagagtgtacattcatggactactttgcaatttatctgcgtttaggtactaaaatgacgatttcttttctattc 3404477  T
Q  106 ggggactaaagtgactaatctccc 129  Q
      ||||||||||||||||| ||||    
T  3404476 aaggactaaagtgactaatgtccc 3404453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 5 - 89
Target Start/End: Original strand, 6441504 - 6441588
Alignment:
Q  5 tctgcattcagggactaaattgactaacagagtctacattcattgactattttgcaatttatctgcattcagggactaaagtgac 89  Q
    ||||||||||||||||||||||||||||| ||||||||||||  || ||||||||||||||||||||||||| ||||||||||||    
T  6441504 tctgcattcagggactaaattgactaacaaagtctacattcagggattattttgcaatttatctgcattcagagactaaagtgac 6441588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 9 - 129
Target Start/End: Original strand, 43257396 - 43257516
Alignment:
Q  9 cattcagggactaaattgactaacagagtctacattcattgactattttgcaatttatctgcattcagggactaaagtgacaacttctttcctattcggg 108  Q
    |||| ||||||||||||||||||||||||||| |||||  || |||||||||||||||||||||||||||| ||||||||| |||  ||| |||||| ||    
T  43257396 catttagggactaaattgactaacagagtctatattcaaggattattttgcaatttatctgcattcagggattaaagtgacgactcattttctattcagg 43257495  T
Q  109 gactaaagtgactaatctccc 129  Q
    || | |||||||| |||||||    
T  43257496 gattgaagtgactgatctccc 43257516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 5 - 96
Target Start/End: Original strand, 14197619 - 14197710
Alignment:
Q  5 tctgcattcagggactaaattgactaacagagtctacattcattgactattttgcaatttatctgcattcagggactaaagtgacaacttct 96  Q
    |||||||||||||| |||||||||||||||||||||||||||  |||||| ||||||||||||||||||||||| ||||| |||| ||||||    
T  14197619 tctgcattcagggattaaattgactaacagagtctacattcagggactatattgcaatttatctgcattcaggggctaaaatgacgacttct 14197710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 21 - 122
Target Start/End: Complemental strand, 5080212 - 5080111
Alignment:
Q  21 aaattgactaacagagtctacattcattgactattttgcaatttatctgcattcagggactaaagtgacaacttctttcctattcggggactaaagtgac 120  Q
    ||||||||||||||||||||||||||  |||| ||||||| ||| |||||||||||| ||||||||||| |||| ||||| |||| ||||||||||||||    
T  5080212 aaattgactaacagagtctacattcaaagactgttttgcattttctctgcattcaggaactaaagtgactacttttttcccattcagggactaaagtgac 5080113  T
Q  121 ta 122  Q
    ||    
T  5080112 ta 5080111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 9 - 129
Target Start/End: Complemental strand, 36150963 - 36150843
Alignment:
Q  9 cattcagggactaaattgactaacagagtctacattcattgactattttgcaatttatctgcattcagggactaaagtgacaacttctttcctattcggg 108  Q
    ||||||| |||||||||||||||||||||||||||  |  || |||||||||||||||||||||||| ||| | ||||||| |||  |||||||||   |    
T  36150963 cattcagagactaaattgactaacagagtctacatctagggattattttgcaatttatctgcattcatggatttaagtgacgactcatttcctatttatg 36150864  T
Q  109 gactaaagtgactaatctccc 129  Q
    |||||||||||||||||||||    
T  36150863 gactaaagtgactaatctccc 36150843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 21 - 124
Target Start/End: Original strand, 27508752 - 27508855
Alignment:
Q  21 aaattgactaacagagtctacattcattgactattttgcaatttatctgcattcagggactaaagtgacaacttctttcctattcggggactaaagtgac 120  Q
    ||||||||||||||||||||||||||  |||| ||||||||||| ||| | |||||||||||||||||| ||| |||| | |||| |||| |||||||||    
T  27508752 aaattgactaacagagtctacattcagggactgttttgcaatttctctacgttcagggactaaagtgactactccttttccattcagggattaaagtgac 27508851  T
Q  121 taat 124  Q
    ||||    
T  27508852 taat 27508855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 23 - 124
Target Start/End: Original strand, 3404634 - 3404735
Alignment:
Q  23 attgactaacagagtctacattcattgactattttgcaatttatctgcattcagggactaaagtgacaacttctttcctattcggggactaaagtgacta 122  Q
    |||||||||| |||||||||||||  |||||||||||||||| ||||||||||||| |||||||||| |||  ||| | |||  || |||||||||||||    
T  3404634 attgactaaccgagtctacattcaaggactattttgcaatttctctgcattcagggcctaaagtgactactctttttccatttaggaactaaagtgacta 3404733  T
Q  123 at 124  Q
    ||    
T  3404734 at 3404735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 21 - 121
Target Start/End: Complemental strand, 15272426 - 15272326
Alignment:
Q  21 aaattgactaacagagtctacattcattgactattttgcaatttatctgcattcagggactaaagtgacaacttctttcctattcggggactaaagtgac 120  Q
    |||||||| |||| ||||||||||||  |||||||||||||||| ||||||||||||||||||| |||| |||  ||||  ||||  |||||||||||||    
T  15272426 aaattgaccaacaaagtctacattcagggactattttgcaatttctctgcattcagggactaaaatgactactcatttctcattcacggactaaagtgac 15272327  T
Q  121 t 121  Q
    |    
T  15272326 t 15272326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 21 - 124
Target Start/End: Complemental strand, 14197562 - 14197459
Alignment:
Q  21 aaattgactaacagagtctacattcattgactattttgcaatttatctgcattcagggactaaagtgacaacttctttcctattcggggactaaagtgac 120  Q
    |||||||| |||||| |||||||||  ||||| ||||||||||| |||||||| ||||||||||||||| |||| ||||| |||  || ||||||||||     
T  14197562 aaattgaccaacagaatctacattcgatgactgttttgcaatttctctgcatttagggactaaagtgactacttttttcccattgaggaactaaagtgat 14197463  T
Q  121 taat 124  Q
    ||||    
T  14197462 taat 14197459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 7 - 87
Target Start/End: Original strand, 37787849 - 37787925
Alignment:
Q  7 tgcattcagggactaaattgactaacagagtctacattcattgactattttgcaatttatctgcattcagggactaaagtg 87  Q
    ||||||||||||||||||||||||||| ||||||||||||   |||||||||||||||   ||||||||||||||||||||    
T  37787849 tgcattcagggactaaattgactaacaaagtctacattca-gaactattttgcaattt---tgcattcagggactaaagtg 37787925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 34 - 124
Target Start/End: Original strand, 45013060 - 45013150
Alignment:
Q  34 gagtctacattcattgactattttgcaatttatctgcattcagggactaaagtgacaacttctttcctattcggggactaaagtgactaat 124  Q
    ||||||| |||||  |||||||||||||||||| |||||||| |||||||| |||| |||  |||||||||  ||||||||||||||||||    
T  45013060 gagtctatattcaaggactattttgcaatttatttgcattcaaggactaaactgacgactcttttcctattaagggactaaagtgactaat 45013150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 26 - 129
Target Start/End: Original strand, 29934448 - 29934551
Alignment:
Q  26 gactaacagagtctacattcattgactattttgcaatttatctgcattcagggactaaagtgacaacttctttcctattcggggactaaagtgactaatc 125  Q
    ||||||||  ||||| ||||||  ||||||||||||||||||| | || || |||||||||||| |||  |||||||| |  |||||||||| |||||||    
T  29934448 gactaacaatgtctatattcatgaactattttgcaatttatctaccttaagagactaaagtgacgactattttcctatccaaggactaaagtaactaatc 29934547  T
Q  126 tccc 129  Q
    ||||    
T  29934548 tccc 29934551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 21 - 124
Target Start/End: Complemental strand, 38761095 - 38760994
Alignment:
Q  21 aaattgactaacagagtctacattcattgactattttgcaatttatctgcattcagggactaaagtgacaacttctttcctattcggggactaaagtgac 120  Q
    |||||||  |||||||||||||| ||  |||| ||||||||||| ||| |||||| | ||||||||||| |||||||||| |||| ||||||||| ||||    
T  38761095 aaattgatcaacagagtctacatccag-gactgttttgcaatttctctacattcacgaactaaagtgactacttctttcccattcagggactaaa-tgac 38760998  T
Q  121 taat 124  Q
    ||||    
T  38760997 taat 38760994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 54 - 124
Target Start/End: Complemental strand, 45012919 - 45012849
Alignment:
Q  54 ttttgcaatttatctgcattcagggactaaagtgacaacttctttcctattcggggactaaagtgactaat 124  Q
    ||||||||||| | ||||||||| |||||||||||| ||| |||||| |||| ||||| ||||||||||||    
T  45012919 ttttgcaatttctttgcattcagagactaaagtgactactcctttcccattcagggaccaaagtgactaat 45012849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 259 - 320
Target Start/End: Original strand, 2962725 - 2962786
Alignment:
Q  259 gggattcgaacctcgtaccttgcatatattatgcattatctttaccaacttagctaagttca 320  Q
    ||||||| |||| || |||||||||||||||||||||||||||||||| | | |||||||||    
T  2962725 gggattcaaaccccgaaccttgcatatattatgcattatctttaccaattgaactaagttca 2962786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 21 - 89
Target Start/End: Complemental strand, 6441447 - 6441380
Alignment:
Q  21 aaattgactaacagagtctacattcattgactattttgcaatttatctgcattcagggactaaagtgac 89  Q
    ||||||||||| ||||||||||||||  |||| ||||||||||| | ||||||||||||||| ||||||    
T  6441447 aaattgactaa-agagtctacattcagggactgttttgcaatttctttgcattcagggactatagtgac 6441380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 5 - 45
Target Start/End: Original strand, 38761120 - 38761160
Alignment:
Q  5 tctgcattcagggactaaattgactaacagagtctacattc 45  Q
    ||||||||||||||||||||||||||||||||||| |||||    
T  38761120 tctgcattcagggactaaattgactaacagagtctgcattc 38761160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 275 - 320
Target Start/End: Original strand, 7872763 - 7872808
Alignment:
Q  275 accttgcatatattatgcattatctttaccaacttagctaagttca 320  Q
    ||||||||||||||||||||| || ||||||||| |||||||||||    
T  7872763 accttgcatatattatgcattgtccttaccaactgagctaagttca 7872808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 263 - 316
Target Start/End: Complemental strand, 21105661 - 21105608
Alignment:
Q  263 ttcgaacctcgtaccttgcatatattatgcattatctttaccaacttagctaag 316  Q
    ||||||||||| ||||||||||||||||||||| ||  |||||||| |||||||    
T  21105661 ttcgaacctcgaaccttgcatatattatgcattttccataccaactgagctaag 21105608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 9 - 46
Target Start/End: Complemental strand, 27508723 - 27508686
Alignment:
Q  9 cattcagggactaaattgactaacagagtctacattca 46  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  27508723 cattcagggactaaattgactaacagagtctgcattca 27508686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 259 - 316
Target Start/End: Complemental strand, 41029334 - 41029277
Alignment:
Q  259 gggattcgaacctcgtaccttgcatatattatgcattatctttaccaacttagctaag 316  Q
    |||||||||||| || |||||||||||||||| |||| || ||||||||| |||||||    
T  41029334 gggattcgaaccccggaccttgcatatattatacattgtccttaccaactgagctaag 41029277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 46
Target Start/End: Original strand, 45013008 - 45013049
Alignment:
Q  5 tctgcattcagggactaaattgactaacagagtctacattca 46  Q
    ||||||||||||||||||||||||||||| | ||||||||||    
T  45013008 tctgcattcagggactaaattgactaacaaactctacattca 45013049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 259 - 308
Target Start/End: Complemental strand, 45425515 - 45425466
Alignment:
Q  259 gggattcgaacctcgtaccttgcatatattatgcattatctttaccaact 308  Q
    |||||||||||| || ||||||||||||||||||||| |||||| |||||    
T  45425515 gggattcgaaccccgaaccttgcatatattatgcattgtctttatcaact 45425466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 263 - 316
Target Start/End: Complemental strand, 46987144 - 46987091
Alignment:
Q  263 ttcgaacctcgtaccttgcatatattatgcattatctttaccaacttagctaag 316  Q
    |||||||| || ||||||||||||||||||||| || ||||||||| |||||||    
T  46987144 ttcgaaccccggaccttgcatatattatgcattgtccttaccaactgagctaag 46987091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 263 - 323
Target Start/End: Original strand, 3337272 - 3337332
Alignment:
Q  263 ttcgaacctcgtaccttgcatatattatgcattatctttaccaacttagctaagttcatga 323  Q
    ||||||||| | ||||| ||| ||||||||||| ||| |||||||| ||||||||||||||    
T  3337272 ttcgaaccttgaaccttacatttattatgcattgtctctaccaactaagctaagttcatga 3337332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 261 - 308
Target Start/End: Complemental strand, 2618739 - 2618692
Alignment:
Q  261 gattcgaacctcgtaccttgcatatattatgcattatctttaccaact 308  Q
    |||||||||| || ||||||||||||||||||||| || |||||||||    
T  2618739 gattcgaaccccggaccttgcatatattatgcattgtccttaccaact 2618692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 260 - 327
Target Start/End: Complemental strand, 5584708 - 5584641
Alignment:
Q  260 ggattcgaacctcgtaccttgcatatattatgcattatctttaccaacttagctaagttcatgaggac 327  Q
    ||||||||| | || || |||||||||||||| |||||||||||||| | ||||||| ||| ||||||    
T  5584708 ggattcgaatcccgaactttgcatatattatgtattatctttaccaattgagctaagctcacgaggac 5584641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 260 - 327
Target Start/End: Complemental strand, 5589668 - 5589601
Alignment:
Q  260 ggattcgaacctcgtaccttgcatatattatgcattatctttaccaacttagctaagttcatgaggac 327  Q
    ||||||||| | || || |||||||||||||| |||||||||||||| | ||||||| ||| ||||||    
T  5589668 ggattcgaatcccgaactttgcatatattatgtattatctttaccaattgagctaagctcacgaggac 5589601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 21 - 124
Target Start/End: Original strand, 15000822 - 15000925
Alignment:
Q  21 aaattgactaacagagtctacattcattgactattttgcaatttatctgcattcagggactaaagtgacaacttctttcctattcggggactaaagtgac 120  Q
    |||||||| || | |||||||||| |  |||| ||||||||||  ||||||| ||  |||||||||||| |||  ||||| |||| |||||||||||| |    
T  15000822 aaattgaccaataaagtctacatttagggactgttttgcaattcctctgcatccaaagactaaagtgactactcatttcccattcagggactaaagtggc 15000921  T
Q  121 taat 124  Q
    ||||    
T  15000922 taat 15000925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 275 - 318
Target Start/End: Original strand, 34568348 - 34568391
Alignment:
Q  275 accttgcatatattatgcattatctttaccaacttagctaagtt 318  Q
    |||||||||||||||||||||||| ||| ||||| |||||||||    
T  34568348 accttgcatatattatgcattatccttatcaactgagctaagtt 34568391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 21 - 124
Target Start/End: Original strand, 36150992 - 36151095
Alignment:
Q  21 aaattgactaacagagtctacattcattgactattttgcaatttatctgcattcagggactaaagtgacaacttctttcctattcggggactaaagtgac 120  Q
    |||||||| |||| ||||||||||||   ||| ||||||||||| ||  |||||| ||| ||||||||| |||  ||| | || | ||||||||||||||    
T  36150992 aaattgaccaacaaagtctacattcaggtactgttttgcaatttctcaacattcaaggattaaagtgactactcattttccatccagggactaaagtgac 36151091  T
Q  121 taat 124  Q
    ||||    
T  36151092 taat 36151095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 259 - 306
Target Start/End: Original strand, 38858171 - 38858218
Alignment:
Q  259 gggattcgaacctcgtaccttgcatatattatgcattatctttaccaa 306  Q
    ||||||||||||||| ||||| ||||||||||||| | ||||||||||    
T  38858171 gggattcgaacctcggaccttacatatattatgcactgtctttaccaa 38858218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 21 - 124
Target Start/End: Complemental strand, 43257367 - 43257264
Alignment:
Q  21 aaattgactaacagagtctacattcattgactattttgcaatttatctgcattcagggactaaagtgacaacttctttcctattcggggactaaagtgac 120  Q
    |||||||| |||| | ||||||||||  |||| |||| |||||| | |||||||||||||||| ||||| | |  ||| | |||| |||| |||||||||    
T  43257367 aaattgaccaacaaaatctacattcagagactcttttacaatttctatgcattcagggactaaggtgactattcattttccattcagggattaaagtgac 43257268  T
Q  121 taat 124  Q
    ||||    
T  43257267 taat 43257264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 326
Target Start/End: Complemental strand, 3532650 - 3532576
Alignment:
Q  252 agtgtttgggattcgaacctcgtaccttgcatatattatgcattatctttaccaacttagctaagttcatgagga 326  Q
    |||||||||| |||||||||||  || ||||||||||||||| ||||  |||||||| | ||||| ||| |||||    
T  3532650 agtgtttggggttcgaacctcggcccctgcatatattatgcaatatccctaccaactgaactaagatcacgagga 3532576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 270 - 308
Target Start/End: Complemental strand, 3584255 - 3584217
Alignment:
Q  270 ctcgtaccttgcatatattatgcattatctttaccaact 308  Q
    |||||||||||||||||||||||||| || |||||||||    
T  3584255 ctcgtaccttgcatatattatgcattgtccttaccaact 3584217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 270 - 316
Target Start/End: Complemental strand, 8615074 - 8615028
Alignment:
Q  270 ctcgtaccttgcatatattatgcattatctttaccaacttagctaag 316  Q
    |||| ||||||||||||||||||||| || ||||||||| |||||||    
T  8615074 ctcggaccttgcatatattatgcattgtccttaccaactgagctaag 8615028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 277 - 327
Target Start/End: Complemental strand, 8683114 - 8683064
Alignment:
Q  277 cttgcatatattatgcattatctttaccaacttagctaagttcatgaggac 327  Q
    ||||||||||||||||||| ||| |||||||| ||||||| ||| ||||||    
T  8683114 cttgcatatattatgcattgtctataccaactgagctaagctcacgaggac 8683064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 266 - 316
Target Start/End: Complemental strand, 18714503 - 18714453
Alignment:
Q  266 gaacctcgtaccttgcatatattatgcattatctttaccaacttagctaag 316  Q
    ||||| || ||||||||||||||||||||| || ||||||||| |||||||    
T  18714503 gaaccccggaccttgcatatattatgcattgtccttaccaactgagctaag 18714453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 266 - 320
Target Start/End: Original strand, 39280824 - 39280878
Alignment:
Q  266 gaacctcgtaccttgcatatattatgcattatctttaccaacttagctaagttca 320  Q
    ||||| || ||||||||||||||||||||| |  ||||||||| |||||||||||    
T  39280824 gaaccccggaccttgcatatattatgcattgttcttaccaactgagctaagttca 39280878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 254 - 320
Target Start/End: Complemental strand, 41425289 - 41425223
Alignment:
Q  254 tgtttgggattcgaacctcgtaccttgcatatattatgcattatctttaccaacttagctaagttca 320  Q
    |||||| |||| ||||||| ||| |||||||||||||||||||||| ||  |||| ||||| |||||    
T  41425289 tgtttgagatttgaacctcatacattgcatatattatgcattatctctattaactgagctatgttca 41425223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 261 - 327
Target Start/End: Complemental strand, 42336130 - 42336064
Alignment:
Q  261 gattcgaacctcgtaccttgcatatattatgcattatctttaccaacttagctaagttcatgaggac 327  Q
    |||||||||| || ||||||||| ||||||||||| || ||| ||||| |||||| |||| ||||||    
T  42336130 gattcgaaccccggaccttgcatgtattatgcattgtccttatcaactgagctaaattcacgaggac 42336064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 259 - 308
Target Start/End: Complemental strand, 1046618 - 1046569
Alignment:
Q  259 gggattcgaacctcgtaccttgcatatattatgcattatctttaccaact 308  Q
    |||||||||||| |  ||||| ||||||||||||||||||||||| ||||    
T  1046618 gggattcgaaccccagaccttacatatattatgcattatctttactaact 1046569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 266 - 327
Target Start/End: Complemental strand, 10244782 - 10244721
Alignment:
Q  266 gaacctcgtaccttgcatatattatgcattatctttaccaacttagctaagttcatgaggac 327  Q
    ||||| || ||||||||||||||||||||| ||  |||||||| ||||||| ||| ||||||    
T  10244782 gaaccccggaccttgcatatattatgcattgtccataccaactgagctaagctcacgaggac 10244721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 316
Target Start/End: Original strand, 21050237 - 21050278
Alignment:
Q  275 accttgcatatattatgcattatctttaccaacttagctaag 316  Q
    ||||||||||||||||||||| || ||||||||| |||||||    
T  21050237 accttgcatatattatgcattgtccttaccaactgagctaag 21050278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 263 - 316
Target Start/End: Original strand, 23069860 - 23069913
Alignment:
Q  263 ttcgaacctcgtaccttgcatatattatgcattatctttaccaacttagctaag 316  Q
    |||||||| | ||||||||||||||||||  || |||||||||||| |||||||    
T  23069860 ttcgaaccccataccttgcatatattatgtgttgtctttaccaactgagctaag 23069913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 263 - 316
Target Start/End: Complemental strand, 24991839 - 24991786
Alignment:
Q  263 ttcgaacctcgtaccttgcatatattatgcattatctttaccaacttagctaag 316  Q
    |||||| | |||| ||||||||||||||||||| || ||||||||| |||||||    
T  24991839 ttcgaatcccgtatcttgcatatattatgcattgtccttaccaactgagctaag 24991786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 275 - 327
Target Start/End: Complemental strand, 3830114 - 3830062
Alignment:
Q  275 accttgcatatattatgcattatctttaccaacttagctaagttcatgaggac 327  Q
    ||||||||||||||||||||| ||  ||| |||| ||||||||||| ||||||    
T  3830114 accttgcatatattatgcattgtccctacaaactgagctaagttcacgaggac 3830062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 264 - 320
Target Start/End: Original strand, 10362308 - 10362364
Alignment:
Q  264 tcgaacctcgtaccttgcatatattatgcattatctttaccaacttagctaagttca 320  Q
    ||||| |||| ||||||||||||||||||||| || ||| ||||| || ||||||||    
T  10362308 tcgaatctcgaaccttgcatatattatgcattctccttatcaactgagttaagttca 10362364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 275 - 327
Target Start/End: Original strand, 22690051 - 22690103
Alignment:
Q  275 accttgcatatattatgcattatctttaccaacttagctaagttcatgaggac 327  Q
    |||||||||||||||||||||||  ||| ||||| ||||||| ||| ||||||    
T  22690051 accttgcatatattatgcattattcttagcaactgagctaagctcacgaggac 22690103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 263 - 327
Target Start/End: Original strand, 24225984 - 24226048
Alignment:
Q  263 ttcgaacctcgtaccttgcatatattatgcattatctttaccaacttagctaagttcatgaggac 327  Q
    ||||||||||| ||||| ||||| ||||||||| ||  ||| |||| ||||||||||| ||||||    
T  24225984 ttcgaacctcggaccttacatattttatgcattgtccatacgaactgagctaagttcacgaggac 24226048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 275 - 327
Target Start/End: Original strand, 30006107 - 30006159
Alignment:
Q  275 accttgcatatattatgcattatctttaccaacttagctaagttcatgaggac 327  Q
    |||||||||| ||||||||||||   |||||||| ||||||||||| ||||||    
T  30006107 accttgcatacattatgcattattcataccaactgagctaagttcacgaggac 30006159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 275 - 315
Target Start/End: Original strand, 30463964 - 30464004
Alignment:
Q  275 accttgcatatattatgcattatctttaccaacttagctaa 315  Q
    ||||||||||||||||||||||||| ||| |||| ||||||    
T  30463964 accttgcatatattatgcattatctatactaactgagctaa 30464004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 267 - 327
Target Start/End: Complemental strand, 34773285 - 34773225
Alignment:
Q  267 aacctcgtaccttgcatatattatgcattatctttaccaacttagctaagttcatgaggac 327  Q
    |||||| |||||||||||||||||||||| ||  |||||||| | ||||  ||||||||||    
T  34773285 aacctcataccttgcatatattatgcattgtccctaccaactgaactaaagtcatgaggac 34773225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 270 - 326
Target Start/End: Complemental strand, 41527611 - 41527555
Alignment:
Q  270 ctcgtaccttgcatatattatgcattatctttaccaacttagctaagttcatgagga 326  Q
    |||| ||||||||||||||||||||| ||  |||||||| ||||||| ||| |||||    
T  41527611 ctcggaccttgcatatattatgcattgtccataccaactaagctaagctcacgagga 41527555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 275 - 327
Target Start/End: Complemental strand, 47342723 - 47342671
Alignment:
Q  275 accttgcatatattatgcattatctttaccaacttagctaagttcatgaggac 327  Q
    ||||||||||| ||||||||| ||  |||||||| ||||||||||| ||||||    
T  47342723 accttgcatattttatgcattgtccataccaactgagctaagttcacgaggac 47342671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 81; Significance: 5e-38; HSPs: 76)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 5 - 129
Target Start/End: Original strand, 13753389 - 13753513
Alignment:
Q  5 tctgcattcagggactaaattgactaacagagtctacattcattgactattttgcaatttatctgcattcagggactaaagtgacaacttctttcctatt 104  Q
    |||||||| | |||||||||||||| |||||||||||||| |  |||||||||||||||||||||||||||| ||||||| |||| ||||||||||||||    
T  13753389 tctgcatttaaggactaaattgacttacagagtctacatttagggactattttgcaatttatctgcattcagagactaaaatgacgacttctttcctatt 13753488  T
Q  105 cggggactaaagtgactaatctccc 129  Q
      |||||||||||||||||||||||    
T  13753489 tagggactaaagtgactaatctccc 13753513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 5 - 122
Target Start/End: Original strand, 10760167 - 10760284
Alignment:
Q  5 tctgcattcagggactaaattgactaacagagtctacattcattgactattttgcaatttatctgcattcagggactaaagtgacaacttctttcctatt 104  Q
    ||||||||||||||||||||||||| |||||||||||||| |  |||||||||||||||||||||||||||| ||||||||||||  ||  |||||||||    
T  10760167 tctgcattcagggactaaattgacttacagagtctacatttagggactattttgcaatttatctgcattcagagactaaagtgacggctcatttcctatt 10760266  T
Q  105 cggggactaaagtgacta 122  Q
    | |||| |||||||||||    
T  10760267 cagggattaaagtgacta 10760284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 5 - 123
Target Start/End: Complemental strand, 19491791 - 19491673
Alignment:
Q  5 tctgcattcagggactaaattgactaacagagtctacattcattgactattttgcaatttatctgcattcagggactaaagtgacaacttctttcctatt 104  Q
    |||||||||||  ||||| |||||||||| ||| |||||||||  ||||||||||||||||||||||||||  ||||||||||| || ||||||||||||    
T  19491791 tctgcattcagatactaagttgactaacatagtatacattcataaactattttgcaatttatctgcattcatagactaaagtgataatttctttcctatt 19491692  T
Q  105 cggggactaaagtgactaa 123  Q
    | ||||| |||||||||||    
T  19491691 cagggaccaaagtgactaa 19491673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 5 - 126
Target Start/End: Original strand, 30100771 - 30100892
Alignment:
Q  5 tctgcattcagggactaaattgactaacagagtctacattcattgactattttgcaatttatctgcattcagggactaaagtgacaacttctttcctatt 104  Q
    ||||||||||||||||||| ||| ||||||||||| ||||||| |||||||||||||||||||| ||||||||  ||||| | ||||||| ||| |||||    
T  30100771 tctgcattcagggactaaagtgattaacagagtctgcattcatggactattttgcaatttatctacattcaggacctaaaattacaacttattttctatt 30100870  T
Q  105 cggggactaaagtgactaatct 126  Q
    |  |||||||| ||||||||||    
T  30100871 caaggactaaaatgactaatct 30100892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 5 - 127
Target Start/End: Complemental strand, 2555558 - 2555436
Alignment:
Q  5 tctgcattcagggactaaattgactaacagagtctacattcattgactattttgcaatttatctgcattcagggactaaagtgacaacttctttcctatt 104  Q
    ||||||||||  ||||||||||||||||||||||||||||||  |||||||||||||| ||| || |||||||||||||||| || |||  ||||||| |    
T  2555558 tctgcattcaacgactaaattgactaacagagtctacattcagagactattttgcaatatatttgtattcagggactaaagttacgactcatttcctact 2555459  T
Q  105 cggggactaaagtgactaatctc 127  Q
    | | | |||||||||||||||||    
T  2555458 cagaggctaaagtgactaatctc 2555436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 7 - 125
Target Start/End: Original strand, 21943905 - 21944023
Alignment:
Q  7 tgcattcagggactaaattgactaacagagtctacattcattgactattttgcaatttatctgcattcagggactaaagtgacaacttctttcctattcg 106  Q
    ||||||||||||||||||||| |||||||||||||||||||  ||||||||||||||||| ||||||||  ||||||| |||| | |  ||| ||||||     
T  21943905 tgcattcagggactaaattgattaacagagtctacattcatgaactattttgcaatttatttgcattcaatgactaaaatgacgattcattttctattca 21944004  T
Q  107 gggactaaagtgactaatc 125  Q
    ||||||||||||| |||||    
T  21944005 gggactaaagtgattaatc 21944023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 5 - 129
Target Start/End: Complemental strand, 30852698 - 30852581
Alignment:
Q  5 tctgcattcagggactaaattgactaacagagtctacattcattgactattttgcaatttatctgcattcagggactaaagtgacaacttctttcctatt 104  Q
    ||||||||||||||||||||||||||||||||| ||||||||   ||||||||       ||||| ||||||||||||||||||| |||| |||||||||    
T  30852698 tctgcattcagggactaaattgactaacagagtttacattcaggaactatttt-------atctgtattcagggactaaagtgacgacttatttcctatt 30852606  T
Q  105 cggggactaaagtgactaatctccc 129  Q
    |  ||||||||||||||||||||||    
T  30852605 caaggactaaagtgactaatctccc 30852581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 21 - 122
Target Start/End: Complemental strand, 21211520 - 21211419
Alignment:
Q  21 aaattgactaacagagtctacattcattgactattttgcaatttatctgcattcagggactaaagtgacaacttctttcctattcggggactaaagtgac 120  Q
    |||||||| |||| ||||||||||||  |||| ||||||||||| |||||||||||||||||||||||| |||  ||||| |||| ||||||||||||||    
T  21211520 aaattgaccaacaaagtctacattcagagactgttttgcaatttttctgcattcagggactaaagtgactactcatttcccattcagggactaaagtgac 21211421  T
Q  121 ta 122  Q
    ||    
T  21211420 ta 21211419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 2 - 89
Target Start/End: Complemental strand, 17497117 - 17497031
Alignment:
Q  2 gaatctgcattcagggactaaattgactaacagagtctacattcattgactattttgcaatttatctgcattcagggactaaagtgac 89  Q
    ||||||||||||| ||||||||||||||||||||| |||||||||  |||||||||||||||||||  |||||| |||||||| ||||    
T  17497117 gaatctgcattcaaggactaaattgactaacagagactacattcacggactattttgcaatttatc-acattcatggactaaaatgac 17497031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 21 - 124
Target Start/End: Complemental strand, 21943846 - 21943743
Alignment:
Q  21 aaattgactaacagagtctacattcattgactattttgcaatttatctgcattcagggactaaagtgacaacttctttcctattcggggactaaagtgac 120  Q
    ||||||||||||| ||||||||||||  | || ||||||||||| |||||||||||| ||||||||||| |||  ||||| ||||  |||||||||||||    
T  21943846 aaattgactaacaaagtctacattcaaggtctgttttgcaatttctctgcattcaggtactaaagtgactactcatttcccattcaaggactaaagtgac 21943747  T
Q  121 taat 124  Q
    ||||    
T  21943746 taat 21943743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 21 - 121
Target Start/End: Original strand, 17497171 - 17497271
Alignment:
Q  21 aaattgactaacagagtctacattcattgactattttgcaatttatctgcattcagggactaaagtgacaacttctttcctattcggggactaaagtgac 120  Q
    |||||||| |||| ||||||||||||  |||||||||||||||| ||||||||||||||||||| |||| |||  ||||  ||||  |||||||||||||    
T  17497171 aaattgaccaacaaagtctacattcagggactattttgcaatttctctgcattcagggactaaaatgactactcatttctcattcacggactaaagtgac 17497270  T
Q  121 t 121  Q
    |    
T  17497271 t 17497271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 21 - 123
Target Start/End: Complemental strand, 20429980 - 20429878
Alignment:
Q  21 aaattgactaacagagtctacattcattgactattttgcaatttatctgcattcagggactaaagtgacaacttctttcctattcggggactaaagtgac 120  Q
    |||||||| |||||||||||||||||  |||| ||||||||||| ||||||| ||| | |||||| ||| ||| |||||  |||| ||||||||||||||    
T  20429980 aaattgaccaacagagtctacattcaaagactgttttgcaatttctctgcatccagaggctaaagcgactactcctttcacattcagggactaaagtgac 20429881  T
Q  121 taa 123  Q
    |||    
T  20429880 taa 20429878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 17 - 115
Target Start/End: Complemental strand, 34419587 - 34419489
Alignment:
Q  17 gactaaattgactaacagagtctacattcattgactattttgcaatttatctgcattcagggactaaagtgacaacttctttcctattcggggactaaa 115  Q
    |||||||||||||||||||   ||||||||  |||||||||||||||||||||||||| | || ||||||||| ||| |||| |||||| | |||||||    
T  34419587 gactaaattgactaacagaacttacattcagggactattttgcaatttatctgcattctgagattaaagtgacgactccttttctattcagagactaaa 34419489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 5 - 89
Target Start/End: Complemental strand, 11298078 - 11297993
Alignment:
Q  5 tctgcattcagggactaaattgactaacagagtctacattcattgactattttgcaatttatc-tgcattcagggactaaagtgac 89  Q
    ||||||||||| ||||||||||||||||||||||||  ||||  || |||||||||||||||| | |||||||| |||||||||||    
T  11298078 tctgcattcagagactaaattgactaacagagtctatgttcagggattattttgcaatttatcttacattcaggaactaaagtgac 11297993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 21 - 125
Target Start/End: Original strand, 19491848 - 19491952
Alignment:
Q  21 aaattgactaacagagtctacattcattgactattttgcaatttatctgcattcagggactaaagtgacaacttctttcctattcggggactaaagtgac 120  Q
    ||||||||||||||||||||| ||||   ||| ||||||||||| |||||||||| ||||| ||||||| |||  ||||  |||| || |||||||||||    
T  19491848 aaattgactaacagagtctacgttcaagcactgttttgcaatttctctgcattcaaggacttaagtgactactcttttctcattcaggaactaaagtgac 19491947  T
Q  121 taatc 125  Q
    |||||    
T  19491948 taatc 19491952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 20 - 129
Target Start/End: Original strand, 19564830 - 19564943
Alignment:
Q  20 taaattgactaacagagtctacattcattgactattttgcaatttatctgcattcagggactaaagtgacaacttctttcctatt----cggggactaaa 115  Q
    |||||||||||||  ||| ||||||||   ||||||||||||||||||| |||||| ||||||||||||| |||  |||||||||      |||||||||    
T  19564830 taaattgactaacgaagtttacattcaaaaactattttgcaatttatctccattcaaggactaaagtgacgactgatttcctatttagggagggactaaa 19564929  T
Q  116 gtgactaatctccc 129  Q
    ||||||||||||||    
T  19564930 gtgactaatctccc 19564943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 21 - 124
Target Start/End: Complemental strand, 13753332 - 13753229
Alignment:
Q  21 aaattgactaacagagtctacattcattgactattttgcaatttatctgcattcagggactaaagtgacaacttctttcctattcggggactaaagtgac 120  Q
    |||||||| ||||||||||||| |||   ||| ||||||||||| ||||||||||  |||||||||||| |||  ||| |||||  ||||||||||||||    
T  13753332 aaattgaccaacagagtctacactcagatactgttttgcaatttctctgcattcaatgactaaagtgactactcattttctatttagggactaaagtgac 13753233  T
Q  121 taat 124  Q
    ||||    
T  13753232 taat 13753229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 49 - 104
Target Start/End: Original strand, 21211603 - 21211658
Alignment:
Q  49 gactattttgcaatttatctgcattcagggactaaagtgacaacttctttcctatt 104  Q
    ||||||||||||||||||||||||||||||||||||||||| ||  ||||||||||    
T  21211603 gactattttgcaatttatctgcattcagggactaaagtgaccacccctttcctatt 21211658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 259 - 316
Target Start/End: Complemental strand, 27679560 - 27679503
Alignment:
Q  259 gggattcgaacctcgtaccttgcatatattatgcattatctttaccaacttagctaag 316  Q
    |||||| ||||| || |||||||||||||||||||||||||||||||||| |||||||    
T  27679560 gggatttgaaccccgaaccttgcatatattatgcattatctttaccaactgagctaag 27679503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 259 - 331
Target Start/End: Complemental strand, 35109462 - 35109390
Alignment:
Q  259 gggattcgaacctcgtaccttgcatatattatgcattatctttaccaacttagctaagttcatgaggacgttc 331  Q
    ||||||||||||||| ||||||||||||||||| ||| |||||||||||| || |||| ||| | ||||||||    
T  35109462 gggattcgaacctcggaccttgcatatattatgtattgtctttaccaactgagttaagctcacgtggacgttc 35109390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 21 - 124
Target Start/End: Original strand, 2555615 - 2555718
Alignment:
Q  21 aaattgactaacagagtctacattcattgactattttgcaatttatctgcattcagggactaaagtgacaacttctttcctattcggggactaaagtgac 120  Q
    |||||||| |||  ||||||||||||  |||| ||||||||||| |||||||| || ||||||||| || | || ||||| |||| |||||||| |||||    
T  2555615 aaattgaccaacgcagtctacattcagggactgttttgcaatttttctgcatttagagactaaagtaactaattatttcccattcagggactaacgtgac 2555714  T
Q  121 taat 124  Q
    ||||    
T  2555715 taat 2555718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 21 - 124
Target Start/End: Original strand, 43548948 - 43549051
Alignment:
Q  21 aaattgactaacagagtctacattcattgactattttgcaatttatctgcattcagggactaaagtgacaacttctttcctattcggggactaaagtgac 120  Q
    |||||||| |||| |||||||||||||  ||| ||||||||||| |||||| ||| ||||||||||||| | ||| ||   |||| | ||||||||||||    
T  43548948 aaattgaccaacatagtctacattcatgtactgttttgcaatttctctgcaatcaaggactaaagtgactatttccttttcattcagagactaaagtgac 43549047  T
Q  121 taat 124  Q
    ||||    
T  43549048 taat 43549051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 259 - 315
Target Start/End: Complemental strand, 11017238 - 11017182
Alignment:
Q  259 gggattcgaacctcgtaccttgcatatattatgcattatctttaccaacttagctaa 315  Q
    ||||||||||||||  ||||||||||||||||||||||||  |||||||| ||||||    
T  11017238 gggattcgaacctcagaccttgcatatattatgcattatccctaccaactgagctaa 11017182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 259 - 327
Target Start/End: Complemental strand, 28207194 - 28207126
Alignment:
Q  259 gggattcgaacctcgtaccttgcatatattatgcattatctttaccaacttagctaagttcatgaggac 327  Q
    ||||||||||||||| ||||||||||| ||||||||| ||  |||||||| ||||||| ||| ||||||    
T  28207194 gggattcgaacctcggaccttgcatattttatgcattgtccataccaactgagctaagctcacgaggac 28207126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 263 - 306
Target Start/End: Complemental strand, 22745947 - 22745904
Alignment:
Q  263 ttcgaacctcgtaccttgcatatattatgcattatctttaccaa 306  Q
    ||||||||||||||||| |||||||||||||||||| |||||||    
T  22745947 ttcgaacctcgtaccttacatatattatgcattatccttaccaa 22745904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 275 - 320
Target Start/End: Original strand, 11844453 - 11844498
Alignment:
Q  275 accttgcatatattatgcattatctttaccaacttagctaagttca 320  Q
    ||||||||||||||||||||| || ||||||||| |||||||||||    
T  11844453 accttgcatatattatgcattgtccttaccaactgagctaagttca 11844498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 263 - 316
Target Start/End: Complemental strand, 18391658 - 18391605
Alignment:
Q  263 ttcgaacctcgtaccttgcatatattatgcattatctttaccaacttagctaag 316  Q
    ||||||||||| ||||||||||| ||||||||| || ||||||||| |||||||    
T  18391658 ttcgaacctcggaccttgcatattttatgcattgtccttaccaactgagctaag 18391605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 66
Target Start/End: Original strand, 20430037 - 20430098
Alignment:
Q  5 tctgcattcagggactaaattgactaacagagtctacattcattgactattttgcaatttat 66  Q
    |||||||||| | ||||||||||||||| ||||||| |||||   |||||||||||||||||    
T  20430037 tctgcattcatgaactaaattgactaacggagtctatattcaaaaactattttgcaatttat 20430098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 266 - 327
Target Start/End: Complemental strand, 30893988 - 30893927
Alignment:
Q  266 gaacctcgtaccttgcatatattatgcattatctttaccaacttagctaagttcatgaggac 327  Q
    ||||||| |||||||||||||||||||||| ||||||| |||| || |||| ||| ||||||    
T  30893988 gaacctcataccttgcatatattatgcattgtctttacaaactgagttaagctcacgaggac 30893927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 275 - 328
Target Start/End: Original strand, 36321509 - 36321562
Alignment:
Q  275 accttgcatatattatgcattatctttaccaacttagctaagttcatgaggacg 328  Q
    ||||||||||||||||||||| || ||||||||| ||||||| ||| |||||||    
T  36321509 accttgcatatattatgcattgtccttaccaactgagctaagctcacgaggacg 36321562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 275 - 327
Target Start/End: Original strand, 1808608 - 1808660
Alignment:
Q  275 accttgcatatattatgcattatctttaccaacttagctaagttcatgaggac 327  Q
    ||||||||||| ||||||||||||  |||||||| ||||||||||| ||||||    
T  1808608 accttgcatattttatgcattatccataccaactgagctaagttcacgaggac 1808660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 266 - 326
Target Start/End: Original strand, 5246162 - 5246222
Alignment:
Q  266 gaacctcgtaccttgcatatattatgcattatctttaccaacttagctaagttcatgagga 326  Q
    |||||||| ||||||||||||||||||||| ||| |||||| | || |||||| |||||||    
T  5246162 gaacctcgaaccttgcatatattatgcattgtctataccaattgagttaagtttatgagga 5246222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 260 - 320
Target Start/End: Complemental strand, 11647258 - 11647198
Alignment:
Q  260 ggattcgaacctcgtaccttgcatatattatgcattatctttaccaacttagctaagttca 320  Q
    ||||||||||| |  ||||||||||||||||||||| || ||||||||| || ||||||||    
T  11647258 ggattcgaaccccaaaccttgcatatattatgcattgtccttaccaactgagttaagttca 11647198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 275 - 315
Target Start/End: Complemental strand, 18538654 - 18538614
Alignment:
Q  275 accttgcatatattatgcattatctttaccaacttagctaa 315  Q
    ||||||||||||||||||||| ||| |||||||||||||||    
T  18538654 accttgcatatattatgcattgtctctaccaacttagctaa 18538614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 121
Target Start/End: Original strand, 31912356 - 31912472
Alignment:
Q  5 tctgcattcagggactaaattgactaacagagtctacattcattgactattttgcaatttatctgcattcagggactaaagtgacaacttctttcctatt 104  Q
    |||| ||||| ||||||||| ||  |||| | ||||||||||   | |||||| |||||||| | |||| | |||||||| |||| ||||||||||||||    
T  31912356 tctgtattcaaggactaaatcgatcaacataatctacattcaagaattattttacaatttatttacatttatggactaaaatgacgacttctttcctatt 31912455  T
Q  105 cggggactaaagtgact 121  Q
    | |  ||||||||||||    
T  31912456 cagaaactaaagtgact 31912472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 263 - 327
Target Start/End: Complemental strand, 37932388 - 37932324
Alignment:
Q  263 ttcgaacctcgtaccttgcatatattatgcattatctttaccaacttagctaagttcatgaggac 327  Q
    |||||||| || ||||||||||||||||||||| ||  |||||||| ||||||| ||| ||||||    
T  37932388 ttcgaaccccggaccttgcatatattatgcattgtccataccaactgagctaagctcacgaggac 37932324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 85
Target Start/End: Complemental strand, 43548826 - 43548766
Alignment:
Q  25 tgactaacagagtctacattcattgactattttgcaatttatctgcattcagggactaaag 85  Q
    ||||||||||||||||||| || |||||||||||  |||||  |||||||||||| |||||    
T  43548826 tgactaacagagtctacatacaatgactattttgtcatttaaatgcattcagggattaaag 43548766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 263 - 330
Target Start/End: Original strand, 20145573 - 20145640
Alignment:
Q  263 ttcgaacctcgtaccttgcatatattatgcattatctttaccaacttagctaagttcatgaggacgtt 330  Q
    |||||||| ||  ||||||||| |||||||| ||||  |||||||| ||||||||||||| |||||||    
T  20145573 ttcgaaccccggcccttgcataaattatgcaatatccctaccaactaagctaagttcatggggacgtt 20145640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 35 - 138
Target Start/End: Complemental strand, 30100703 - 30100600
Alignment:
Q  35 agtctacattcattgactattttgcaatttatctgcattcagggactaaagtgacaacttctttcctattcggggactaaagtgactaatctccccttat 134  Q
    ||||||||||||  || | ||||||||||| |||||||| ||||| ||||||||| |||  ||||  | |  ||||||||||||||||||  ||| ||||    
T  30100703 agtctacattcaaggattgttttgcaatttctctgcatttagggattaaagtgactactcttttctcacttagggactaaagtgactaattccccgttat 30100604  T
Q  135 tatt 138  Q
    ||||    
T  30100603 tatt 30100600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 263 - 297
Target Start/End: Original strand, 5107248 - 5107282
Alignment:
Q  263 ttcgaacctcgtaccttgcatatattatgcattat 297  Q
    ||||||||||| |||||||||||||||||||||||    
T  5107248 ttcgaacctcggaccttgcatatattatgcattat 5107282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 278 - 308
Target Start/End: Complemental strand, 6898064 - 6898034
Alignment:
Q  278 ttgcatatattatgcattatctttaccaact 308  Q
    |||||||||||||||||||||||||||||||    
T  6898064 ttgcatatattatgcattatctttaccaact 6898034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 328
Target Start/End: Complemental strand, 13480295 - 13480249
Alignment:
Q  282 atatattatgcattatctttaccaacttagctaagttcatgaggacg 328  Q
    |||||||||||| |||| ||||||||| ||||||||||||| |||||    
T  13480295 atatattatgcaatatccttaccaactgagctaagttcatggggacg 13480249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 258 - 308
Target Start/End: Original strand, 16752500 - 16752550
Alignment:
Q  258 tgggattcgaacctcgtaccttgcatatattatgcattatctttaccaact 308  Q
    ||||||||||||| || | ||||||||||||||||||| || |||||||||    
T  16752500 tgggattcgaaccccgaatcttgcatatattatgcattgtccttaccaact 16752550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 261 - 315
Target Start/End: Original strand, 28604419 - 28604473
Alignment:
Q  261 gattcgaacctcgtaccttgcatatattatgcattatctttaccaacttagctaa 315  Q
    |||||||||| || ||||| ||| ||||||||||| |||||||||||| ||||||    
T  28604419 gattcgaaccccggaccttacatttattatgcattgtctttaccaactgagctaa 28604473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 262 - 316
Target Start/End: Original strand, 31308645 - 31308699
Alignment:
Q  262 attcgaacctcgtaccttgcatatattatgcattatctttaccaacttagctaag 316  Q
    |||||||||||  ||||||||||||||||  ||| |||||||||||| |||||||    
T  31308645 attcgaacctctaaccttgcatatattatatattgtctttaccaactgagctaag 31308699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 266 - 316
Target Start/End: Original strand, 37614433 - 37614483
Alignment:
Q  266 gaacctcgtaccttgcatatattatgcattatctttaccaacttagctaag 316  Q
    |||||||| |||||||||||||||||| || ||| |||||||| |||||||    
T  37614433 gaacctcgaaccttgcatatattatgcgttgtctctaccaactgagctaag 37614483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 327
Target Start/End: Complemental strand, 596463 - 596410
Alignment:
Q  275 accttgcatatattatgcattat-ctttaccaacttagctaagttcatgaggac 327  Q
    ||||||||||||||||||||| | ||||||||||  ||||||||||| ||||||    
T  596463 accttgcatatattatgcattgtgctttaccaaccgagctaagttcacgaggac 596410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 259 - 308
Target Start/End: Original strand, 1476109 - 1476158
Alignment:
Q  259 gggattcgaacctcgtaccttgcatatattatgcattatctttaccaact 308  Q
    ||||||||||||  | ||||||||||||||||| ||||| ||||||||||    
T  1476109 gggattcgaaccctgaaccttgcatatattatgaattatttttaccaact 1476158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 253 - 306
Target Start/End: Complemental strand, 3955614 - 3955561
Alignment:
Q  253 gtgtttgggattcgaacctcgtaccttgcatatattatgcattatctttaccaa 306  Q
    |||| ||||||||||||| || || || ||||||||||||||| ||||||||||    
T  3955614 gtgtctgggattcgaaccccgaacattacatatattatgcattgtctttaccaa 3955561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 278 - 327
Target Start/End: Complemental strand, 5846072 - 5846023
Alignment:
Q  278 ttgcatatattatgcattatctttaccaacttagctaagttcatgaggac 327  Q
    |||||||||||||||||| || ||||||||| ||||||||| || |||||    
T  5846072 ttgcatatattatgcattgtccttaccaactgagctaagtttataaggac 5846023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 46
Target Start/End: Original strand, 10760139 - 10760176
Alignment:
Q  9 cattcagggactaaattgactaacagagtctacattca 46  Q
    |||||||||||||||||||||||| |||||| ||||||    
T  10760139 cattcagggactaaattgactaacggagtctgcattca 10760176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 94
Target Start/End: Complemental strand, 12895647 - 12895558
Alignment:
Q  5 tctgcattcagggactaaattgactaacagagtctacattcattgactattttgcaatttatctgcattcagggactaaagtgacaactt 94  Q
    |||||||| | ||| |||||||||||||| |||||||||||   |||||||||  |||||||| ||||| ||  |||||| | |||||||    
T  12895647 tctgcatttaaggattaaattgactaacaaagtctacattcggagactattttttaatttatcagcatttagtaactaaaataacaactt 12895558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 328
Target Start/End: Complemental strand, 15889457 - 15889404
Alignment:
Q  275 accttgcatatattatgcattatctttaccaacttagctaagttcatgaggacg 328  Q
    ||||||||||||||||||||| ||  |||||||| ||||||| ||| |||||||    
T  15889457 accttgcatatattatgcattgtccctaccaactgagctaagctcacgaggacg 15889404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 316
Target Start/End: Original strand, 16133080 - 16133121
Alignment:
Q  275 accttgcatatattatgcattatctttaccaacttagctaag 316  Q
    ||||||||||||||||||||| || ||||||||| |||||||    
T  16133080 accttgcatatattatgcattgtccttaccaactgagctaag 16133121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 263 - 316
Target Start/End: Original strand, 16485966 - 16486019
Alignment:
Q  263 ttcgaacctcgtaccttgcatatattatgcattatctttaccaacttagctaag 316  Q
    ||||||||| | ||||||||||||||||| ||| |||||||| |||||| ||||    
T  16485966 ttcgaaccttggaccttgcatatattatgtattgtctttaccgacttagttaag 16486019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 259 - 308
Target Start/End: Original strand, 17145347 - 17145396
Alignment:
Q  259 gggattcgaacctcgtaccttgcatatattatgcattatctttaccaact 308  Q
    ||||||||||||||  | |||||||||||||| |||| ||||||||||||    
T  17145347 gggattcgaacctcagatcttgcatatattatacattgtctttaccaact 17145396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 316
Target Start/End: Original strand, 19068454 - 19068495
Alignment:
Q  275 accttgcatatattatgcattatctttaccaacttagctaag 316  Q
    ||||||||||||||||||||||||  |||||||| |||||||    
T  19068454 accttgcatatattatgcattatccataccaactgagctaag 19068495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 278 - 327
Target Start/End: Complemental strand, 19248522 - 19248473
Alignment:
Q  278 ttgcatatattatgcattatctttaccaacttagctaagttcatgaggac 327  Q
    |||||||||||||||||| ||| |||||||| ||||||| ||| ||||||    
T  19248522 ttgcatatattatgcattgtctataccaactgagctaagctcacgaggac 19248473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 263 - 320
Target Start/End: Complemental strand, 26377024 - 26376967
Alignment:
Q  263 ttcgaacctcgtaccttgcatatattatgcattatctttaccaacttagctaagttca 320  Q
    |||||||| || || ||||||||| |||||||| || ||||||||| |||||||||||    
T  26377024 ttcgaaccccggacgttgcatataatatgcattgtccttaccaactgagctaagttca 26376967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 278 - 327
Target Start/End: Complemental strand, 31198752 - 31198703
Alignment:
Q  278 ttgcatatattatgcattatctttaccaacttagctaagttcatgaggac 327  Q
    ||||||||||||||||||||| ||||||||| || |||| ||| ||||||    
T  31198752 ttgcatatattatgcattatccttaccaactgagttaagatcacgaggac 31198703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 263 - 308
Target Start/End: Complemental strand, 31545929 - 31545884
Alignment:
Q  263 ttcgaacctcgtaccttgcatatattatgcattatctttaccaact 308  Q
    ||||||||| | |||||||||||||||||||||||| | |||||||    
T  31545929 ttcgaaccttgaaccttgcatatattatgcattatcctaaccaact 31545884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 295
Target Start/End: Original strand, 31747119 - 31747156
Alignment:
Q  258 tgggattcgaacctcgtaccttgcatatattatgcatt 295  Q
    ||||||| |||||||||||||| |||||||||||||||    
T  31747119 tgggatttgaacctcgtacctttcatatattatgcatt 31747156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 308
Target Start/End: Complemental strand, 34206273 - 34206240
Alignment:
Q  275 accttgcatatattatgcattatctttaccaact 308  Q
    ||||||||||||||||||||| ||||||||||||    
T  34206273 accttgcatatattatgcattgtctttaccaact 34206240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 266 - 327
Target Start/End: Original strand, 34987157 - 34987218
Alignment:
Q  266 gaacctcgtaccttgcatatattatgcattatctttaccaacttagctaagttcatgaggac 327  Q
    ||||| || |||||| |||||||||||||||||   ||||||| ||||||||||| ||||||    
T  34987157 gaaccccgaaccttggatatattatgcattatccacaccaactgagctaagttcacgaggac 34987218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 263 - 307
Target Start/End: Complemental strand, 3222789 - 3222745
Alignment:
Q  263 ttcgaacctcgtaccttgcatatattatgcattatctttaccaac 307  Q
    ||||||||||  ||||||||||||||||| ||| |||||||||||    
T  3222789 ttcgaacctcagaccttgcatatattatgtattgtctttaccaac 3222745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 275 - 327
Target Start/End: Complemental strand, 6489053 - 6489001
Alignment:
Q  275 accttgcatatattatgcattatctttaccaacttagctaagttcatgaggac 327  Q
    ||||||||||||||||||||| ||  |||||||| ||||||| ||| ||||||    
T  6489053 accttgcatatattatgcattgtccctaccaactgagctaagctcacgaggac 6489001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 263 - 327
Target Start/End: Complemental strand, 6624834 - 6624770
Alignment:
Q  263 ttcgaacctcgtaccttgcatatattatgcattatctttaccaacttagctaagttcatgaggac 327  Q
    |||||||| || ||||||||||||||||||||| ||  | |||||| ||||||| ||| ||||||    
T  6624834 ttcgaaccccggaccttgcatatattatgcattgtccatgccaactgagctaagctcacgaggac 6624770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 275 - 315
Target Start/End: Complemental strand, 13409474 - 13409434
Alignment:
Q  275 accttgcatatattatgcattatctttaccaacttagctaa 315  Q
    ||||||||||||||||||||| ||||||| |||| ||||||    
T  13409474 accttgcatatattatgcattgtctttactaactgagctaa 13409434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 263 - 315
Target Start/End: Complemental strand, 13547505 - 13547453
Alignment:
Q  263 ttcgaacctcgtaccttgcatatattatgcattatctttaccaacttagctaa 315  Q
    ||||||||||| ||||| |||| ||||||||||||| ||||||| | ||||||    
T  13547505 ttcgaacctcgaaccttacatacattatgcattatccttaccaattgagctaa 13547453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 254 - 314
Target Start/End: Original strand, 17242674 - 17242734
Alignment:
Q  254 tgtttgggattcgaacctcgtaccttgcatatattatgcattatctttaccaacttagcta 314  Q
    |||| ||| |||||||| || |||||||||||| ||||||||||| || |||||| |||||    
T  17242674 tgttcggggttcgaaccgcggaccttgcatatactatgcattatccttgccaactgagcta 17242734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 275 - 315
Target Start/End: Original strand, 18489091 - 18489131
Alignment:
Q  275 accttgcatatattatgcattatctttaccaacttagctaa 315  Q
    ||||||||||||||||||||| ||| |||||||| ||||||    
T  18489091 accttgcatatattatgcattgtctataccaactgagctaa 18489131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 260 - 308
Target Start/End: Original strand, 19783635 - 19783683
Alignment:
Q  260 ggattcgaacctcgtaccttgcatatattatgcattatctttaccaact 308  Q
    |||||||||| ||| ||||||||||||||||| ||| |||||| |||||    
T  19783635 ggattcgaacatcggaccttgcatatattatgtattgtctttatcaact 19783683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 275 - 327
Target Start/End: Original strand, 20370145 - 20370197
Alignment:
Q  275 accttgcatatattatgcattatctttaccaacttagctaagttcatgaggac 327  Q
    |||||| |||||||||||||||||  |||||||| ||||||| ||| ||||||    
T  20370145 accttgtatatattatgcattatccctaccaactgagctaagctcacgaggac 20370197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #74
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 275 - 327
Target Start/End: Complemental strand, 24485745 - 24485693
Alignment:
Q  275 accttgcatatattatgcattatctttaccaacttagctaagttcatgaggac 327  Q
    ||||||||||||||||||||| ||  |||||||| ||||||| ||| ||||||    
T  24485745 accttgcatatattatgcattgtccataccaactaagctaagctcacgaggac 24485693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #75
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 259 - 295
Target Start/End: Complemental strand, 32339797 - 32339761
Alignment:
Q  259 gggattcgaacctcgtaccttgcatatattatgcatt 295  Q
    |||||||||||| || |||||||||||||||||||||    
T  32339797 gggattcgaaccccggaccttgcatatattatgcatt 32339761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #76
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 260 - 308
Target Start/End: Complemental strand, 34702551 - 34702503
Alignment:
Q  260 ggattcgaacctcgtaccttgcatatattatgcattatctttaccaact 308  Q
    ||||||||||| || ||||| ||||||||||||||| || |||||||||    
T  34702551 ggattcgaaccccggacctttcatatattatgcattgtccttaccaact 34702503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 81; Significance: 5e-38; HSPs: 64)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 5 - 129
Target Start/End: Complemental strand, 31820033 - 31819910
Alignment:
Q  5 tctgcattcagggactaaattgactaacagagtctacattcattgactattttgcaatttatctgcattcagggactaaagtgacaacttctttcctatt 104  Q
    |||||||||| ||||||||| ||||||||||||||||||||| |||||||||| ||||||||||||||| |||||||||| |||| | | ||||||||||    
T  31820033 tctgcattcaaggactaaatggactaacagagtctacattcagtgactattttccaatttatctgcatttagggactaaaatgacgattcctttcctatt 31819934  T
Q  105 cggggactaaagtgactaatctccc 129  Q
    | |||||||||||||||||||||||    
T  31819933 c-gggactaaagtgactaatctccc 31819910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 9 - 129
Target Start/End: Original strand, 39598671 - 39598791
Alignment:
Q  9 cattcagggactaaattgactaacagagtctacattcattgactattttgcaatttatctgcattcagggactaaagtgacaacttctttcctattcggg 108  Q
    ||||||| |||||||||||| |||| ||||||||||||  |||||||||||||||||||||||||||| ||||||| ||| || ||||||||||||  ||    
T  39598671 cattcagcgactaaattgaccaacaaagtctacattcagggactattttgcaatttatctgcattcagtgactaaaatgaaaatttctttcctattgagg 39598770  T
Q  109 gactaaagtgactaatctccc 129  Q
    |||||||||||||||| ||||    
T  39598771 gactaaagtgactaatatccc 39598791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 9 - 89
Target Start/End: Original strand, 32092891 - 32092971
Alignment:
Q  9 cattcagggactaaattgactaacagagtctacattcattgactattttgcaatttatctgcattcagggactaaagtgac 89  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||||| |||||||||||||||||||||||||||||||    
T  32092891 cattcagggactaaattgactaacagagtctacattcagggactatttttcaatttatctgcattcagggactaaagtgac 32092971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 5 - 106
Target Start/End: Complemental strand, 22092979 - 22092878
Alignment:
Q  5 tctgcattcagggactaaattgactaacagagtctacattcattgactattttgcaatttatctgcattcagggactaaagtgacaacttctttcctatt 104  Q
    |||||||||||| |||||| ||||||||||||||||||||||  ||||||||| ||||||||||||| ||| ||||||||||||| ||| ||||||||||    
T  22092979 tctgcattcaggaactaaactgactaacagagtctacattcagggactattttacaatttatctgcaatcaaggactaaagtgacgactcctttcctatt 22092880  T
Q  105 cg 106  Q
    ||    
T  22092879 cg 22092878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 24007036 - 24007164
Alignment:
Q  1 ggaatctgcattcagggactaaattgactaacagagtctacattcattgactattttgcaatttatctgcattcagggactaaagtgacaacttctttcc 100  Q
    |||||||||||||| |||||||||||||||||||||||||||||||  | ||||||| ||||||||||| ||||| |||||||||| || |||  |||||    
T  24007036 ggaatctgcattcatggactaaattgactaacagagtctacattcaaagtctattttacaatttatctgtattcaaggactaaagtaacgactcatttcc 24007135  T
Q  101 tattcggggactaaagtgactaatctccc 129  Q
    || ||  |||| |||||||||||| ||||    
T  24007136 tagtcaaggaccaaagtgactaatttccc 24007164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 23 - 124
Target Start/End: Complemental strand, 32092860 - 32092759
Alignment:
Q  23 attgactaacagagtctacattcattgactattttgcaatttatctgcattcagggactaaagtgacaacttctttcctattcggggactaaagtgacta 122  Q
    |||||| |||||||||||||||||  |||| ||||||||||| |||||||||||||||||||||||| |||  ||||| |||| ||||||||||||||||    
T  32092860 attgacaaacagagtctacattcagggactgttttgcaatttctctgcattcagggactaaagtgactactcatttcccattcagggactaaagtgacta 32092761  T
Q  123 at 124  Q
    ||    
T  32092760 at 32092759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 21 - 89
Target Start/End: Complemental strand, 24006983 - 24006915
Alignment:
Q  21 aaattgactaacagagtctacattcattgactattttgcaatttatctgcattcagggactaaagtgac 89  Q
    ||||||| ||||||||||||||||||  |||| ||||||||||| ||||||||||||||||||||||||    
T  24006983 aaattgagtaacagagtctacattcagggactgttttgcaatttctctgcattcagggactaaagtgac 24006915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 5 - 129
Target Start/End: Original strand, 31499510 - 31499635
Alignment:
Q  5 tctgcattcagggactaaattgactaacagagtctacattcattgactattttgcaatttatctgcattcagggactaaagtgac-aacttctttcctat 103  Q
    |||||||||||  |||||| ||||||||||| ||||||||||  ||||||||| |||||||||| ||||||  || |||||||||  |||  |||| |||    
T  31499510 tctgcattcagaaactaaaatgactaacagattctacattcagggactattttacaatttatctacattcaaagattaaagtgactgactattttcttat 31499609  T
Q  104 tcggggactaaagtgactaatctccc 129  Q
    ||||  |||||||||||||| |||||    
T  31499610 tcggtcactaaagtgactaaactccc 31499635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 5 - 71
Target Start/End: Complemental strand, 8219258 - 8219193
Alignment:
Q  5 tctgcattcagggactaaattgactaacagagtctacattcattgactattttgcaatttatctgca 71  Q
    |||||||||||  |||||||||||||||||||||||||||||  ||||||||| |||||||| ||||    
T  8219258 tctgcattcagaaactaaattgactaacagagtctacattca-agactattttacaatttatttgca 8219193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 261 - 327
Target Start/End: Original strand, 40099385 - 40099450
Alignment:
Q  261 gattcgaacctcgtaccttgcatatattatgcattatctttaccaacttagctaagttcatgaggac 327  Q
    ||||||||||||| ||||||||||||||||||||| || ||||||||| ||||||| ||||| ||||    
T  40099385 gattcgaacctcg-accttgcatatattatgcattgtccttaccaactgagctaagctcatggggac 40099450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 267 - 316
Target Start/End: Complemental strand, 13000739 - 13000690
Alignment:
Q  267 aacctcgtaccttgcatatattatgcattatctttaccaacttagctaag 316  Q
    ||||||| ||||| |||||||||||||||||||||||||||| |||||||    
T  13000739 aacctcggaccttacatatattatgcattatctttaccaactgagctaag 13000690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 266 - 327
Target Start/End: Original strand, 21558812 - 21558873
Alignment:
Q  266 gaacctcgtaccttgcatatattatgcattatctttaccaacttagctaagttcatgaggac 327  Q
    |||||||| ||||||||||||||||||||| || |||||| || ||||||||||| ||||||    
T  21558812 gaacctcggaccttgcatatattatgcattgtccttaccagctgagctaagttcacgaggac 21558873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 263 - 308
Target Start/End: Original strand, 37320520 - 37320565
Alignment:
Q  263 ttcgaacctcgtaccttgcatatattatgcattatctttaccaact 308  Q
    ||||||||||| ||||||||||||||||||||| ||||||||||||    
T  37320520 ttcgaacctcgaaccttgcatatattatgcattgtctttaccaact 37320565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 267 - 327
Target Start/End: Complemental strand, 7206179 - 7206119
Alignment:
Q  267 aacctcgtaccttgcatatattatgcattatctttaccaacttagctaagttcatgaggac 327  Q
    ||||||| ||||||||||||||||||||| ||| |||||||| ||||||| ||| ||||||    
T  7206179 aacctcggaccttgcatatattatgcattgtctctaccaactgagctaagctcacgaggac 7206119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 277 - 320
Target Start/End: Complemental strand, 10065517 - 10065474
Alignment:
Q  277 cttgcatatattatgcattatctttaccaacttagctaagttca 320  Q
    ||||||||||||||||||| || |||||||||||||||||||||    
T  10065517 cttgcatatattatgcattgtccttaccaacttagctaagttca 10065474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 253 - 315
Target Start/End: Complemental strand, 12124613 - 12124551
Alignment:
Q  253 gtgtttgggattcgaacctcgtaccttgcatatattatgcattatctttaccaacttagctaa 315  Q
    ||||||| | |||||||| || ||||||||||||||||||||| || ||||||||| ||||||    
T  12124613 gtgtttgaggttcgaaccccggaccttgcatatattatgcattgtccttaccaactgagctaa 12124551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 250 - 316
Target Start/End: Original strand, 19179040 - 19179106
Alignment:
Q  250 gtagtgtttgggattcgaacctcgtaccttgcatatattatgcattatctttaccaacttagctaag 316  Q
    |||||||| |||||||||| | |  ||||||||||||||||||||| || ||||||||| |||||||    
T  19179040 gtagtgttcgggattcgaagcgcagaccttgcatatattatgcattgtccttaccaactgagctaag 19179106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 24 - 86
Target Start/End: Original strand, 22093039 - 22093101
Alignment:
Q  24 ttgactaacagagtctacattcattgactattttgcaatttatctgcattcagggactaaagt 86  Q
    ||||| |||||| ||||||||||  |||| ||||||||||| ||| |||||||||||||||||    
T  22093039 ttgaccaacagaatctacattcagagactgttttgcaatttctctacattcagggactaaagt 22093101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 266 - 316
Target Start/End: Complemental strand, 22608582 - 22608532
Alignment:
Q  266 gaacctcgtaccttgcatatattatgcattatctttaccaacttagctaag 316  Q
    ||||||| |||||||||||||||||||||| ||| |||||||| |||||||    
T  22608582 gaacctcataccttgcatatattatgcattgtctctaccaactgagctaag 22608532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 278 - 320
Target Start/End: Original strand, 38835258 - 38835300
Alignment:
Q  278 ttgcatatattatgcattatctttaccaacttagctaagttca 320  Q
    |||||||||||||||||| || |||||||||||||||||||||    
T  38835258 ttgcatatattatgcattgtccttaccaacttagctaagttca 38835300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 3 - 96
Target Start/End: Complemental strand, 17914126 - 17914034
Alignment:
Q  3 aatctgcattcagggactaaattgactaacagagtctacattcattgactattttgcaatttatctgcattcagggactaaagtgacaacttct 96  Q
    ||||| |||| |||| ||||||||||||||| | ||||||||||  || ||||||||||||||| ||| || | |||||||| |||| ||||||    
T  17914126 aatctacatttagggtctaaattgactaacaaaatctacattcaaggattattttgcaatttatttgcgttta-ggactaaaatgacgacttct 17914034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 259 - 316
Target Start/End: Original strand, 20120720 - 20120777
Alignment:
Q  259 gggattcgaacctcgtaccttgcatatattatgcattatctttaccaacttagctaag 316  Q
    |||||| ||||| || ||||||||||||||||||||| || ||||||||| |||||||    
T  20120720 gggatttgaaccccgaaccttgcatatattatgcattgtccttaccaactgagctaag 20120777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 263 - 316
Target Start/End: Complemental strand, 24593434 - 24593381
Alignment:
Q  263 ttcgaacctcgtaccttgcatatattatgcattatctttaccaacttagctaag 316  Q
    |||||||| || ||||||||||||||||||||| || ||||||||| |||||||    
T  24593434 ttcgaaccccggaccttgcatatattatgcattgtccttaccaactgagctaag 24593381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 266 - 327
Target Start/End: Complemental strand, 30243305 - 30243244
Alignment:
Q  266 gaacctcgtaccttgcatatattatgcattatctttaccaacttagctaagttcatgaggac 327  Q
    ||||| || |||||| |||||||||||||| ||| |||||||| ||||||||||| ||||||    
T  30243305 gaaccccgaaccttgtatatattatgcattgtctctaccaactgagctaagttcacgaggac 30243244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 275 - 327
Target Start/End: Original strand, 18782555 - 18782607
Alignment:
Q  275 accttgcatatattatgcattatctttaccaacttagctaagttcatgaggac 327  Q
    ||||||||||||||||||||| | | |||||||||||||||  ||||||||||    
T  18782555 accttgcatatattatgcattgtttctaccaacttagctaaactcatgaggac 18782607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 327
Target Start/End: Complemental strand, 20455953 - 20455885
Alignment:
Q  259 gggattcgaacctcgtaccttgcatatattatgcattatctttaccaacttagctaagttcatgaggac 327  Q
    |||||||||||| || ||||||||||||||||||||| ||  |||||| | ||||||| ||| ||||||    
T  20455953 gggattcgaaccccggaccttgcatatattatgcattgtccataccaattgagctaagctcacgaggac 20455885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 327
Target Start/End: Original strand, 22523011 - 22523079
Alignment:
Q  259 gggattcgaacctcgtaccttgcatatattatgcattatctttaccaacttagctaagttcatgaggac 327  Q
    |||||| |||||||| ||||||||||||||||| ||| ||  |||||||| ||||||| ||| ||||||    
T  22523011 gggatttgaacctcgaaccttgcatatattatgtattgtccataccaactgagctaagctcacgaggac 22523079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 275 - 327
Target Start/End: Original strand, 24592861 - 24592913
Alignment:
Q  275 accttgcatatattatgcattatctttaccaacttagctaagttcatgaggac 327  Q
    ||||||||||||||||||||| ||  |||||||| ||||||||||| ||||||    
T  24592861 accttgcatatattatgcattgtccctaccaactgagctaagttcacgaggac 24592913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 275 - 327
Target Start/End: Complemental strand, 26999156 - 26999104
Alignment:
Q  275 accttgcatatattatgcattatctttaccaacttagctaagttcatgaggac 327  Q
    ||||||||||||||||||||| ||| |||||||| | ||||||||| ||||||    
T  26999156 accttgcatatattatgcattgtctctaccaactgaactaagttcacgaggac 26999104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 295
Target Start/End: Original strand, 41778943 - 41778979
Alignment:
Q  259 gggattcgaacctcgtaccttgcatatattatgcatt 295  Q
    ||||||||||||||| |||||||||||||||||||||    
T  41778943 gggattcgaacctcggaccttgcatatattatgcatt 41778979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 253 - 316
Target Start/End: Complemental strand, 12124752 - 12124689
Alignment:
Q  253 gtgtttgggattcgaacctcgtaccttgcatatattatgcattatctttaccaacttagctaag 316  Q
    ||||||| | |||||||  || ||||||||||||||||||||| || ||||||||| |||||||    
T  12124752 gtgtttgaggttcgaactccggaccttgcatatattatgcattgtccttaccaactgagctaag 12124689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 259 - 329
Target Start/End: Original strand, 16221345 - 16221415
Alignment:
Q  259 gggattcgaacctcgtaccttgcatatattatgcattatctttaccaacttagctaagttcatgaggacgt 329  Q
    |||||||||||| || ||||||||||| ||||||||| |   |||||||| ||||||  ||||||||||||    
T  16221345 gggattcgaaccccgaaccttgcatattttatgcattgttcataccaactgagctaaactcatgaggacgt 16221415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 261 - 327
Target Start/End: Original strand, 22571866 - 22571932
Alignment:
Q  261 gattcgaacctcgtaccttgcatatattatgcattatctttaccaacttagctaagttcatgaggac 327  Q
    |||| ||||| || || |||||||||||||||||| ||| || ||||| ||||||||||| ||||||    
T  22571866 gatttgaaccccggacattgcatatattatgcattgtctatatcaactgagctaagttcacgaggac 22571932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 258 - 308
Target Start/End: Complemental strand, 27935119 - 27935069
Alignment:
Q  258 tgggattcgaacctcgtaccttgcatatattatgcattatctttaccaact 308  Q
    |||| |||||||||||||||||||||||||| |||||| ||  ||||||||    
T  27935119 tggggttcgaacctcgtaccttgcatatattctgcattgtccctaccaact 27935069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 257 - 327
Target Start/End: Complemental strand, 31543076 - 31543006
Alignment:
Q  257 ttgggattcgaacctcgtaccttgcatatattatgcattatctttaccaacttagctaagttcatgaggac 327  Q
    ||||| || ||||| || ||||||||||||||||||||||||  ||||| || ||||||| ||| ||||||    
T  31543076 ttggggtttgaaccccggaccttgcatatattatgcattatccataccatctgagctaagctcacgaggac 31543006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 262 - 316
Target Start/End: Original strand, 36547237 - 36547291
Alignment:
Q  262 attcgaacctcgtaccttgcatatattatgcattatctttaccaacttagctaag 316  Q
    |||||||||||  || ||||||||||||| ||||||| ||||||||| |||||||    
T  36547237 attcgaacctcaaactttgcatatattatacattatccttaccaactgagctaag 36547291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 278 - 320
Target Start/End: Original strand, 39088817 - 39088859
Alignment:
Q  278 ttgcatatattatgcattatctttaccaacttagctaagttca 320  Q
    |||||||||||||||||| |||||||||||| || ||||||||    
T  39088817 ttgcatatattatgcattgtctttaccaactgagttaagttca 39088859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 253 - 295
Target Start/End: Original strand, 43356535 - 43356577
Alignment:
Q  253 gtgtttgggattcgaacctcgtaccttgcatatattatgcatt 295  Q
    |||||| || ||||||||||| |||||||||||||||||||||    
T  43356535 gtgtttagggttcgaacctcggaccttgcatatattatgcatt 43356577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 259 - 316
Target Start/End: Complemental strand, 10156079 - 10156022
Alignment:
Q  259 gggattcgaacctcgtaccttgcatatattatgcattatctttaccaacttagctaag 316  Q
    |||||||||||  || ||||||||||||||||| ||| || ||||||||| |||||||    
T  10156079 gggattcgaacaccgaaccttgcatatattatgtattgtccttaccaactgagctaag 10156022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 316
Target Start/End: Original strand, 15654884 - 15654925
Alignment:
Q  275 accttgcatatattatgcattatctttaccaacttagctaag 316  Q
    ||||||||||| |||||||||||| ||||||||| |||||||    
T  15654884 accttgcatattttatgcattatccttaccaactgagctaag 15654925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 86
Target Start/End: Original strand, 17914149 - 17914214
Alignment:
Q  21 aaattgactaacagagtctacattcattgactattttgcaatttatctgcattcagggactaaagt 86  Q
    ||||||||||| ||||||||||||||   ||| ||||||||||| ||| |||||  ||||||||||    
T  17914149 aaattgactaatagagtctacattcaaaaactgttttgcaatttctctacattcttggactaaagt 17914214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 316
Target Start/End: Original strand, 18231488 - 18231529
Alignment:
Q  275 accttgcatatattatgcattatctttaccaacttagctaag 316  Q
    ||||||||||||||||||||| || ||||||||| |||||||    
T  18231488 accttgcatatattatgcattgtccttaccaactgagctaag 18231529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 263 - 316
Target Start/End: Complemental strand, 24393303 - 24393250
Alignment:
Q  263 ttcgaacctcgtaccttgcatatattatgcattatctttaccaacttagctaag 316  Q
    ||||||||||  ||||||||||||||||||||| || ||| ||||| |||||||    
T  24393303 ttcgaacctcagaccttgcatatattatgcattgtccttaacaactgagctaag 24393250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 316
Target Start/End: Original strand, 24520658 - 24520695
Alignment:
Q  279 tgcatatattatgcattatctttaccaacttagctaag 316  Q
    ||||||||||||||||| |||||||||||| |||||||    
T  24520658 tgcatatattatgcattgtctttaccaactaagctaag 24520695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 266 - 323
Target Start/End: Original strand, 24581023 - 24581080
Alignment:
Q  266 gaacctcgtaccttgcatatattatgcattatctttaccaacttagctaagttcatga 323  Q
    |||||||| ||||||||||||||||||||| | ||||  |||| |||||| |||||||    
T  24581023 gaacctcgaaccttgcatatattatgcattgtttttatgaactgagctaacttcatga 24581080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 320
Target Start/End: Original strand, 25598577 - 25598622
Alignment:
Q  275 accttgcatatattatgcattatctttaccaacttagctaagttca 320  Q
    ||||||||||||||||||||| ||  |||||||| |||||||||||    
T  25598577 accttgcatatattatgcattgtccataccaactgagctaagttca 25598622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 259 - 308
Target Start/End: Complemental strand, 29809388 - 29809339
Alignment:
Q  259 gggattcgaacctcgtaccttgcatatattatgcattatctttaccaact 308  Q
    |||||||||||| |||||||| ||||||||||||||| ||  ||||||||    
T  29809388 gggattcgaaccccgtacctttcatatattatgcattgtccctaccaact 29809339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 266 - 327
Target Start/End: Complemental strand, 30089104 - 30089043
Alignment:
Q  266 gaacctcgtaccttgcatatattatgcattatctttaccaacttagctaagttcatgaggac 327  Q
    ||||| || |||||| |||||||||||||| ||  |||||||| ||||||||||| ||||||    
T  30089104 gaaccccggaccttgtatatattatgcattgtccctaccaactgagctaagttcacgaggac 30089043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 266 - 327
Target Start/End: Complemental strand, 30125708 - 30125647
Alignment:
Q  266 gaacctcgtaccttgcatatattatgcattatctttaccaacttagctaagttcatgaggac 327  Q
    ||||| || |||||| |||||||||||||| ||  |||||||| ||||||||||| ||||||    
T  30125708 gaaccccggaccttgtatatattatgcattgtccctaccaactgagctaagttcacgaggac 30125647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 261 - 298
Target Start/End: Original strand, 33401577 - 33401614
Alignment:
Q  261 gattcgaacctcgtaccttgcatatattatgcattatc 298  Q
    |||| |||||||||||||||||||||| ||||||||||    
T  33401577 gatttgaacctcgtaccttgcatatatcatgcattatc 33401614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 46
Target Start/End: Original strand, 39598639 - 39598676
Alignment:
Q  9 cattcagggactaaattgactaacagagtctacattca 46  Q
    |||||||||||||||||||||||| |||| ||||||||    
T  39598639 cattcagggactaaattgactaacggagtatacattca 39598676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 266 - 315
Target Start/End: Original strand, 43117196 - 43117245
Alignment:
Q  266 gaacctcgtaccttgcatatattatgcattatctttaccaacttagctaa 315  Q
    |||||||  ||||||||||||||||||||| || ||||||||| ||||||    
T  43117196 gaacctcagaccttgcatatattatgcattgtccttaccaactgagctaa 43117245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 275 - 327
Target Start/End: Original strand, 9383224 - 9383276
Alignment:
Q  275 accttgcatatattatgcattatctttaccaacttagctaagttcatgaggac 327  Q
    ||||||||||||||||||||| ||  |||||||| ||||||| ||| ||||||    
T  9383224 accttgcatatattatgcattgtccataccaactgagctaagctcacgaggac 9383276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 275 - 327
Target Start/End: Complemental strand, 9686503 - 9686451
Alignment:
Q  275 accttgcatatattatgcattatctttaccaacttagctaagttcatgaggac 327  Q
    ||||||||||||||||| ||| ||| |||||||| |||||| |||| ||||||    
T  9686503 accttgcatatattatgtattgtctataccaactgagctaaattcacgaggac 9686451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 275 - 327
Target Start/End: Complemental strand, 11560544 - 11560492
Alignment:
Q  275 accttgcatatattatgcattatctttaccaacttagctaagttcatgaggac 327  Q
    ||||||||||||||||||||| ||  |||||| | ||||||| ||||||||||    
T  11560544 accttgcatatattatgcattgtccctaccaattgagctaagctcatgaggac 11560492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 275 - 307
Target Start/End: Complemental strand, 12231923 - 12231891
Alignment:
Q  275 accttgcatatattatgcattatctttaccaac 307  Q
    |||||||||||||||||||||||| ||||||||    
T  12231923 accttgcatatattatgcattatccttaccaac 12231891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 281 - 321
Target Start/End: Complemental strand, 16385453 - 16385413
Alignment:
Q  281 catatattatgcattatctttaccaacttagctaagttcat 321  Q
    ||||||||||||||| |||||||||||||| |||| |||||    
T  16385453 catatattatgcattgtctttaccaacttaactaaattcat 16385413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 275 - 315
Target Start/End: Original strand, 21482534 - 21482574
Alignment:
Q  275 accttgcatatattatgcattatctttaccaacttagctaa 315  Q
    |||||||||||||||| ||||||| ||||||||| ||||||    
T  21482534 accttgcatatattatacattatccttaccaactgagctaa 21482574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 275 - 327
Target Start/End: Complemental strand, 26400797 - 26400745
Alignment:
Q  275 accttgcatatattatgcattatctttaccaacttagctaagttcatgaggac 327  Q
    ||||||||||||||||||||| || ||||||||| ||  ||| ||||||||||    
T  26400797 accttgcatatattatgcattgtccttaccaactgagtaaagctcatgaggac 26400745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 263 - 315
Target Start/End: Complemental strand, 28771640 - 28771588
Alignment:
Q  263 ttcgaacctcgtaccttgcatatattatgcattatctttaccaacttagctaa 315  Q
    |||||||| || | ||||||||||||||||||| || ||||||||| ||||||    
T  28771640 ttcgaaccgcggatcttgcatatattatgcattgtccttaccaactgagctaa 28771588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 275 - 327
Target Start/End: Original strand, 34345370 - 34345422
Alignment:
Q  275 accttgcatatattatgcattatctttaccaacttagctaagttcatgaggac 327  Q
    ||||| ||||||||||| ||||||| || ||||| || |||||||||||||||    
T  34345370 accttacatatattatgtattatctatatcaactgagataagttcatgaggac 34345422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 263 - 327
Target Start/End: Complemental strand, 34903575 - 34903511
Alignment:
Q  263 ttcgaacctcgtaccttgcatatattatgcattatctttaccaacttagctaagttcatgaggac 327  Q
    ||||||||||  ||||||||||||||||||| | || ||||||||| | ||||| ||||| ||||    
T  34903575 ttcgaacctcagaccttgcatatattatgcactgtccttaccaactgaactaagctcatggggac 34903511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 275 - 315
Target Start/End: Original strand, 35685076 - 35685116
Alignment:
Q  275 accttgcatatattatgcattatctttaccaacttagctaa 315  Q
    ||||||||||||||||||||| || ||||||||| ||||||    
T  35685076 accttgcatatattatgcattgtccttaccaactgagctaa 35685116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 262 - 322
Target Start/End: Complemental strand, 42200746 - 42200686
Alignment:
Q  262 attcgaacctcgtaccttgcatatattatgcattatctttaccaacttagctaagttcatg 322  Q
    |||||||| ||  ||||||||||||||||| ||| |||||||||||| || ||| ||||||    
T  42200746 attcgaacatcagaccttgcatatattatgtattgtctttaccaactgagttaacttcatg 42200686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 68; Significance: 3e-30; HSPs: 2)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 5 - 124
Target Start/End: Complemental strand, 127923 - 127804
Alignment:
Q  5 tctgcattcagggactaaattgactaacagagtctacattcattgactattttgcaatttatctgcattcagggactaaagtgacaacttctttcctatt 104  Q
    |||||||||||  ||||| |||||||||| ||| ||||||||   |||||||||||||||||||||||||| |||||||||||| || ||||||||||||    
T  127923 tctgcattcagatactaagttgactaacatagtatacattcagaaactattttgcaatttatctgcattcatggactaaagtgataatttctttcctatt 127824  T
Q  105 cggggactaaagtgactaat 124  Q
    | ||||| ||||||||||||    
T  127823 cagggaccaaagtgactaat 127804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 21 - 125
Target Start/End: Original strand, 127980 - 128084
Alignment:
Q  21 aaattgactaacagagtctacattcattgactattttgcaatttatctgcattcagggactaaagtgacaacttctttcctattcggggactaaagtgac 120  Q
    ||||||||||||||||||||| ||||   ||| ||||||||||| |||||||||| | ||| ||||||| |||  ||||  |||| || |||||||||||    
T  127980 aaattgactaacagagtctacgttcaagcactgttttgcaatttctctgcattcaagtacttaagtgactactcttttctgattcaggaactaaagtgac 128079  T
Q  121 taatc 125  Q
    |||||    
T  128080 taatc 128084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 67; Significance: 1e-29; HSPs: 2)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 9 - 127
Target Start/End: Complemental strand, 15480 - 15362
Alignment:
Q  9 cattcagggactaaattgactaacagagtctacattcattgactattttgcaatttatctgcattcagggactaaagtgacaacttctttcctattcggg 108  Q
    ||||||| || |||||||||||||||||||||||||||  ||||||||| ||||||||||||||||| |||||||||||||||||  ||||  ||||       
T  15480 cattcagagattaaattgactaacagagtctacattcagagactattttacaatttatctgcattcaaggactaaagtgacaactcatttctaattcaaa 15381  T
Q  109 gactaaagtgactaatctc 127  Q
    |||||||||||||||||||    
T  15380 gactaaagtgactaatctc 15362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 46
Target Start/End: Complemental strand, 15519 - 15475
Alignment:
Q  2 gaatctgcattcagggactaaattgactaacagagtctacattca 46  Q
    |||||| ||||||| |||||||||| ||||| |||||||||||||    
T  15519 gaatctacattcagagactaaattggctaacggagtctacattca 15475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 62; Significance: 1e-26; HSPs: 3)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 5 - 122
Target Start/End: Complemental strand, 57568 - 57451
Alignment:
Q  5 tctgcattcagggactaaattgactaacagagtctacattcattgactattttgcaatttatctgcattcagggactaaagtgacaacttctttcctatt 104  Q
    |||||||||||  ||||| |||||||||| ||| ||||||||   |||||||| ||||||||||||||||| |||||||||||| || ||||||||||||    
T  57568 tctgcattcagatactaagttgactaacatagtatacattcagaaactatttttcaatttatctgcattcatggactaaagtgataatttctttcctatt 57469  T
Q  105 cggggactaaagtgacta 122  Q
    | ||||| ||||||||||    
T  57468 cagggaccaaagtgacta 57451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 21 - 125
Target Start/End: Original strand, 57625 - 57729
Alignment:
Q  21 aaattgactaacagagtctacattcattgactattttgcaatttatctgcattcagggactaaagtgacaacttctttcctattcggggactaaagtgac 120  Q
    ||||||||||||||||||||| ||||   ||| ||||||||||| |||||||| | | ||| ||||||| |||  ||||  |||| || |||||||||||    
T  57625 aaattgactaacagagtctacgttcaagcactgttttgcaatttctctgcattaaagtacttaagtgactactcttttctgattcaggaactaaagtgac 57724  T
Q  121 taatc 125  Q
    |||||    
T  57725 taatc 57729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 259 - 313
Target Start/End: Complemental strand, 75387 - 75333
Alignment:
Q  259 gggattcgaacctcgtaccttgcatatattatgcattatctttaccaacttagct 313  Q
    |||||||||||| || ||||||||||||||||||||| || ||||||||| ||||    
T  75387 gggattcgaaccccggaccttgcatatattatgcattgtccttaccaactgagct 75333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 61; Significance: 4e-26; HSPs: 2)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 5 - 129
Target Start/End: Complemental strand, 24011 - 23887
Alignment:
Q  5 tctgcattcagggactaaattgactaacagagtctacattcattgactattttgcaatttatctgcattcagggactaaagtgacaacttctttcctatt 104  Q
    ||||||||||||||||||||||||||||  |||||||||||   ||| ||||||||||||||||  ||||| ||||||||| ||| |||  |||||||||    
T  24011 tctgcattcagggactaaattgactaacgtagtctacattcggggaccattttgcaatttatctatattcaaggactaaagggacgactcatttcctatt 23912  T
Q  105 cggggactaaagtgactaatctccc 129  Q
      || ||||||||||||||||||||    
T  23911 taggaactaaagtgactaatctccc 23887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 21 - 124
Target Start/End: Original strand, 24068 - 24170
Alignment:
Q  21 aaattgactaacagagtctacattcattgactattttgcaatttatctgcattcagggactaaagtgacaact--tctttcctattcggggactaaagtg 118  Q
    |||||||| |||||| ||||||||||  || | ||||||||||| |||||||||||||||||||   ||||||  ||||| | |||| |||| |||||||    
T  24068 aaattgaccaacagaatctacattcagggattgttttgcaatttctctgcattcagggactaaa---acaactactcttttccattcagggattaaagtg 24164  T
Q  119 actaat 124  Q
    ||||||    
T  24165 actaat 24170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 56; Significance: 4e-23; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 5 - 76
Target Start/End: Complemental strand, 314197 - 314126
Alignment:
Q  5 tctgcattcagggactaaattgactaacagagtctacattcattgactattttgcaatttatctgcattcag 76  Q
    |||||||||||||||||||||||||||||||||||||||| |  ||||||||||||||| ||||||||||||    
T  314197 tctgcattcagggactaaattgactaacagagtctacatttagggactattttgcaattaatctgcattcag 314126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 46
Target Start/End: Complemental strand, 314225 - 314188
Alignment:
Q  9 cattcagggactaaattgactaacagagtctacattca 46  Q
    |||||||||||||||||||||||| |||||| ||||||    
T  314225 cattcagggactaaattgactaacggagtctgcattca 314188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 54; Significance: 6e-22; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 21 - 118
Target Start/End: Complemental strand, 59808 - 59711
Alignment:
Q  21 aaattgactaacagagtctacattcattgactattttgcaatttatctgcattcagggactaaagtgacaacttctttcctattcggggactaaagtg 118  Q
    ||||||||||||||||||||||||||  | || ||||||||||| |||||||||||||||||||||||| ||  |||||| |||  ||||||||||||    
T  59808 aaattgactaacagagtctacattcaggggctgttttgcaatttctctgcattcagggactaaagtgactacacctttcccattgagggactaaagtg 59711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0407 (Bit Score: 53; Significance: 2e-21; HSPs: 4)
Name: scaffold0407
Description:

Target: scaffold0407; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 3 - 91
Target Start/End: Original strand, 1025 - 1113
Alignment:
Q  3 aatctgcattcagggactaaattgactaacagagtctacattcattgactattttgcaatttatctgcattcagggactaaagtgacaa 91  Q
    ||||||||||||||||||||||||| ||| | ||||||| ||||  |||||||||| ||||||| |||||||| |||||||||||||||    
T  1025 aatctgcattcagggactaaattgaataataaagtctacgttcagggactattttgtaatttatttgcattcaaggactaaagtgacaa 1113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0407; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 3 - 91
Target Start/End: Original strand, 7489 - 7577
Alignment:
Q  3 aatctgcattcagggactaaattgactaacagagtctacattcattgactattttgcaatttatctgcattcagggactaaagtgacaa 91  Q
    ||||||||||||||||||||||||| ||| | ||||||| ||||  |||||||||| ||||||| |||||||| |||||||||||||||    
T  7489 aatctgcattcagggactaaattgaataataaagtctacgttcagggactattttgtaatttatttgcattcaaggactaaagtgacaa 7577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0407; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 21 - 89
Target Start/End: Complemental strand, 938 - 871
Alignment:
Q  21 aaattgactaacagagtctacattcattgactattttgcaatttatctgcattcagggactaaagtgac 89  Q
    ||||||||||| ||||||||||||||  |||| ||||||||||| ||||||||||||||||||||||||    
T  938 aaattgactaatagagtctacattcag-gactgttttgcaatttctctgcattcagggactaaagtgac 871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0407; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 21 - 89
Target Start/End: Complemental strand, 7402 - 7335
Alignment:
Q  21 aaattgactaacagagtctacattcattgactattttgcaatttatctgcattcagggactaaagtgac 89  Q
    ||||||||||| ||||||||||||||  |||| ||||||||||| ||||||||||||||||||||||||    
T  7402 aaattgactaatagagtctacattcag-gactgttttgcaatttctctgcattcagggactaaagtgac 7335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 9 - 129
Target Start/End: Complemental strand, 11720 - 11601
Alignment:
Q  9 cattcagggactaaattgactaacagagtctacattcattgactattttgcaatttatctgcattcagggactaaagtgacaacttctttcctattcggg 108  Q
    ||||||| || ||||||| |||||| ||||||||||||  ||||||||| ||||||||||||||| | |||||||| | || |||  |||||||||| |     
T  11720 cattcagagattaaattgcctaacatagtctacattcagggactattttacaatttatctgcattta-ggactaaaataacgactcatttcctattcagt 11622  T
Q  109 gactaaagtgactaatctccc 129  Q
    |||||||||||||||||||||    
T  11621 gactaaagtgactaatctccc 11601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 21 - 124
Target Start/End: Original strand, 11749 - 11850
Alignment:
Q  21 aaattgactaacagagtctacattcattgactattttgcaatttatctgcattcagggactaaagtgacaacttctttcctattcggggactaaagtgac 120  Q
    ||||||||||| ||||||||  || |  |||||||||||||||| |||||||||||||||||||| ||| |||  ||||| |||| |  ||||||||||     
T  11749 aaattgactaagagagtcta--tttaaggactattttgcaatttctctgcattcagggactaaagcgactactcatttcccattcagaaactaaagtgat 11846  T
Q  121 taat 124  Q
    ||||    
T  11847 taat 11850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1300 (Bit Score: 52; Significance: 9e-21; HSPs: 2)
Name: scaffold1300
Description:

Target: scaffold1300; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 49 - 124
Target Start/End: Complemental strand, 1432 - 1357
Alignment:
Q  49 gactattttgcaatttatctgcattcagggactaaagtgacaacttctttcctattcggggactaaagtgactaat 124  Q
    ||||||||||||||||||||||||| |||||||||||||| || || ||||||||||  |||||||||||||||||    
T  1432 gactattttgcaatttatctgcatttagggactaaagtgataatttatttcctattcaaggactaaagtgactaat 1357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1300; HSP #2
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 21 - 125
Target Start/End: Original strand, 1526 - 1630
Alignment:
Q  21 aaattgactaacagagtctacattcattgactattttgcaatttatctgcattcagggactaaagtgacaacttctttcctattcggggactaaagtgac 120  Q
    ||||||||||||||||||||| ||||  |||| ||||||||||| |||||||||| ||||| ||||||| |||  ||||  |||| || |||||||||||    
T  1526 aaattgactaacagagtctacgttcaaggactgttttgcaatttctctgcattcaaggacttaagtgactactcttttctcattcaggaactaaagtgac 1625  T
Q  121 taatc 125  Q
    |||||    
T  1626 taatc 1630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 52; Significance: 9e-21; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 21 - 124
Target Start/End: Complemental strand, 190281 - 190178
Alignment:
Q  21 aaattgactaacagagtctacattcattgactattttgcaatttatctgcattcagggactaaagtgacaacttctttcctattcggggactaaagtgac 120  Q
    |||||||| |||||||||||||||||  |||| ||||||||||| ||||||||||| ||||||| |||| |||  ||||| |||| ||||||||| ||||    
T  190281 aaattgaccaacagagtctacattcagagactgttttgcaatttctctgcattcagagactaaaatgactactcttttcccattcagggactaaaatgac 190182  T
Q  121 taat 124  Q
    ||||    
T  190181 taat 190178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 5 - 85
Target Start/End: Original strand, 190338 - 190418
Alignment:
Q  5 tctgcattcagggactaaattgactaacagagtctacattcattgactattttgcaatttatctgcattcagggactaaag 85  Q
    |||| ||||||| |||||||||||||||| |||||  ||| |   ||||||||||||||||||| |||||||||| |||||    
T  190338 tctgtattcaggaactaaattgactaacaaagtctgtatttagaaactattttgcaatttatctacattcagggattaaag 190418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 45; Significance: 1e-16; HSPs: 3)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 40 - 124
Target Start/End: Original strand, 72106 - 72190
Alignment:
Q  40 acattcattgactattttgcaatttatctgcattcagggactaaagtgacaacttctttcctattcggggactaaagtgactaat 124  Q
    |||||||  |||| ||||||||||| |   |||||||||||||||||||| |||||||||| |||| ||||||||||||||||||    
T  72106 acattcagggactgttttgcaatttctgcacattcagggactaaagtgactacttctttcccattcagggactaaagtgactaat 72190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 49 - 129
Target Start/End: Complemental strand, 71983 - 71904
Alignment:
Q  49 gactattttgcaatttatctgcattcagggactaaagtgacaacttctttcctattcggggactaaagtgactaatctccc 129  Q
    ||||||||||||||||||||||||||||||| ||||||||| ||  || ||||| ||  |||||||||| |||||||||||    
T  71983 gactattttgcaatttatctgcattcagggattaaagtgacgacccctatcctactc-aggactaaagtcactaatctccc 71904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 46 - 82
Target Start/End: Complemental strand, 72015 - 71979
Alignment:
Q  46 attgactattttgcaatttatctgcattcagggacta 82  Q
    |||||||||||||||||||||||  ||||||||||||    
T  72015 attgactattttgcaatttatctatattcagggacta 71979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 44; Significance: 6e-16; HSPs: 2)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 21 - 124
Target Start/End: Complemental strand, 27592 - 27489
Alignment:
Q  21 aaattgactaacagagtctacattcattgactattttgcaatttatctgcattcagggactaaagtgacaacttctttcctattcggggactaaagtgac 120  Q
    |||||||| ||||||||||||||| |  |||| ||||||||||| || | |||||||| ||||||| || |||  ||| |||||| ||||||||||||||    
T  27592 aaattgaccaacagagtctacattaagagactgttttgcaatttctccgtattcaggggctaaagtaactactcattttctattcagggactaaagtgac 27493  T
Q  121 taat 124  Q
    ||||    
T  27492 taat 27489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 51 - 124
Target Start/End: Original strand, 27682 - 27755
Alignment:
Q  51 ctattttgcaatttatctgcattcagggactaaagtgacaacttctttcctattcggggactaaagtgactaat 124  Q
    |||||||||||||||| ||||||||  |||||||||||| ||| |||||||| || |||||| |||||||||||    
T  27682 ctattttgcaatttatttgcattcatagactaaagtgacgactactttcctaatcagggacttaagtgactaat 27755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 250 - 320
Target Start/End: Complemental strand, 46014 - 45944
Alignment:
Q  250 gtagtgtttgggattcgaacctcgtaccttgcatatattatgcattatctttaccaacttagctaagttca 320  Q
    |||||||| ||| ||||||||||| | |||||||||||||| ||||||  ||||||||| |||||||||||    
T  46014 gtagtgttcggggttcgaacctcggatcttgcatatattatacattattcttaccaactgagctaagttca 45944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0896 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0896
Description:

Target: scaffold0896; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 275 - 327
Target Start/End: Complemental strand, 3187 - 3135
Alignment:
Q  275 accttgcatatattatgcattatctttaccaacttagctaagttcatgaggac 327  Q
    ||||||||||||||||| ||| |||||||||||| ||||||| ||| ||||||    
T  3187 accttgcatatattatgtattgtctttaccaactgagctaagctcacgaggac 3135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 259 - 316
Target Start/End: Complemental strand, 37597 - 37540
Alignment:
Q  259 gggattcgaacctcgtaccttgcatatattatgcattatctttaccaacttagctaag 316  Q
    |||||||||||| || ||||||||||| ||||||||| |   ||||||||||||||||    
T  37597 gggattcgaaccccggaccttgcatattttatgcattgttcataccaacttagctaag 37540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 253 - 297
Target Start/End: Original strand, 42925 - 42969
Alignment:
Q  253 gtgtttgggattcgaacctcgtaccttgcatatattatgcattat 297  Q
    |||| ||||||||||| | || |||||||||||||||||||||||    
T  42925 gtgtctgggattcgaatcccgaaccttgcatatattatgcattat 42969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 29; Significance: 0.0000005; HSPs: 2)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 259 - 315
Target Start/End: Original strand, 53776 - 53832
Alignment:
Q  259 gggattcgaacctcgtaccttgcatatattatgcattatctttaccaacttagctaa 315  Q
    |||||||||||| || ||||||||| ||||||||| | || ||||||||| ||||||    
T  53776 gggattcgaaccccggaccttgcatgtattatgcactgtccttaccaactgagctaa 53832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 267 - 327
Target Start/End: Complemental strand, 58907 - 58847
Alignment:
Q  267 aacctcgtaccttgcatatattatgcattatctttaccaacttagctaagttcatgaggac 327  Q
    ||||||| |||||| ||| |||||||||||||  |||||||| ||||||| ||| ||||||    
T  58907 aacctcggaccttgtatacattatgcattatccataccaactgagctaagctcacgaggac 58847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 275 - 327
Target Start/End: Complemental strand, 1617 - 1565
Alignment:
Q  275 accttgcatatattatgcattatctttaccaacttagctaagttcatgaggac 327  Q
    ||||||||||||||||||| |||| ||||||||| || |||| ||| ||||||    
T  1617 accttgcatatattatgcactatcgttaccaactgagttaagctcacgaggac 1565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University