View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1264_2D_low_26 (Length: 335)
Name: NF1264_2D_low_26
Description: NF1264_2D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1264_2D_low_26 |
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Alignment Details
Target: chr2 (Bit Score: 258; Significance: 1e-143; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 258; E-Value: 1e-143
Query Start/End: Original strand, 1 - 323
Target Start/End: Complemental strand, 9945493 - 9945171
Alignment:
| Q |
1 |
tatataactgttcaatttgtctagatgatattttctaaatatcattcttttataatcttttgcaaacggatattgaaaatattaattgtcaaaattgtgt |
100 |
Q |
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| T |
9945493 |
tatataactgttcaatttgtctagatgatattttctaaatatcattcttttataatcttttgcaaatggatattgaaaatattaattgtcaaaattgtgt |
9945394 |
T |
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| Q |
101 |
aggagtatatgtgaaaattaactcatttggattgatttatcggtgtaatttgtttgagatattgaaatgtgttttttgatgggcaagttcatacagaaca |
200 |
Q |
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| T |
9945393 |
aggagtatatgtgaaaattagctcatttgggttgatttatcggtgtaatttgtttgagatattgaaatgtgttttttgatgggcaagttcatacagatca |
9945294 |
T |
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| Q |
201 |
ttgcgttgactttaaataaggtccgcataatggtcaatgaaattgaacccttcgaattagtcggtatttaaaccagatatcagattttttattnnnnnnn |
300 |
Q |
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| T |
9945293 |
atgcgttgactttaaataaggtccgcagagtggtcattgaaattgaacccttcaaattagtcggtatttaaaccagataccagattttttattaaaaaaa |
9945194 |
T |
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| Q |
301 |
tatgctaaagttgaattgtgatg |
323 |
Q |
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| T |
9945193 |
tatgctaaagttgaattttgatg |
9945171 |
T |
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