View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1264_2D_low_8 (Length: 525)
Name: NF1264_2D_low_8
Description: NF1264_2D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1264_2D_low_8 |
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Alignment Details
Target: chr8 (Bit Score: 395; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 395; E-Value: 0
Query Start/End: Original strand, 87 - 502
Target Start/End: Complemental strand, 932250 - 931835
Alignment:
| Q |
87 |
tatataaggaaatggcataccatagtaggagaataaagtatggttagacatgtgtgatgctaaatcacatttctcttcaactcttactcnnnnnnncctc |
186 |
Q |
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| T |
932250 |
tatataaggaaatggcataccatagtaggagaataaagtatggttagacatgtgtgatgctaaatcacatttctcttcaactcttactctttttttcctc |
932151 |
T |
|
| Q |
187 |
ttcataattttattcctatgcatccgaccagaaataggtaccgatttgatgccggaaccatctaatgttaagtgtgaaaaatcaagctgctttgtataat |
286 |
Q |
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| T |
932150 |
ttcataattttattcctatgcatccgaccagaaataggtaccgatttgatgccggaaccatctaatgttaagtgtgaaaaatcaagctgctttgtataat |
932051 |
T |
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| Q |
287 |
tgagtgccgcaagctctttttcatatttacgttcttgagagtgaagtgacctcagtttcaactcaatccacttacagcgccacgtaatcgggcttatgaa |
386 |
Q |
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| T |
932050 |
tgagtgccgcaagctctttttcatatttacgttcttgagagtgaagtgacctcagtttcaactcaatccacttacagcgccacgtaatcgggcttatgaa |
931951 |
T |
|
| Q |
387 |
cctcttccaatgatctgttgttcttttctttctgaatggttaatagagaaaattgtaaaacatactataaactattgaaattgaagttcaaatcaaagac |
486 |
Q |
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| T |
931950 |
cctcttccaatgatctgttgttcttttctttctgaatggttaatagagaaaattgtaaaacatactataaactattgaaattgaagttcaaatcaaagac |
931851 |
T |
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| Q |
487 |
attgtgaattgtagtc |
502 |
Q |
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| T |
931850 |
attgtgaattgtagtc |
931835 |
T |
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