View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF12651_low_11 (Length: 333)
Name: NF12651_low_11
Description: NF12651
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12651_low_11 |
 | |
|
| [»] scaffold0294 (1 HSPs) |
| | |
|
| [»] scaffold0373 (1 HSPs) |
| | |
|
Alignment Details
Target: chr4 (Bit Score: 307; Significance: 1e-173; HSPs: 27)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 307; E-Value: 1e-173
Query Start/End: Original strand, 11 - 317
Target Start/End: Original strand, 4333865 - 4334171
Alignment:
| Q |
11 |
cacagaagatttttctgaaatttccagaaatgttgttaagtattctgggggattaccgctagctcttgaagtcctcgggtcctatttgtttgatagggag |
110 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4333865 |
cacagaagatttttctgaaatttccagaaatgttgttaagtattctgggggattaccgctagctcttgaagtcctcgggtcctatttgtttgatagggag |
4333964 |
T |
|
| Q |
111 |
atattagagtggatttgtgtattggagaaactcaaaataattcccaatgatcaagtacataagaagttaaaaataagctatgatggtttaaatgatgata |
210 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4333965 |
atattagagtggatttgtgtattggagaaactcaaaataattcccaatgatcaagtacataagaagttaaaaataagctatgatggtttaaatgatgata |
4334064 |
T |
|
| Q |
211 |
ctgagaaatcaatattccttgacatagcttgtttctttattgggatggaccgaaatgatgttattcaaatattaaatggctgtggacttttcgctgaaat |
310 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4334065 |
ctgagaaatcaatattccttgacatagcttgtttctttattgggatggaccgaaatgatgttattcaaatattaaatggctgtggacttttcgctgaaat |
4334164 |
T |
|
| Q |
311 |
tggaata |
317 |
Q |
| |
|
||||||| |
|
|
| T |
4334165 |
tggaata |
4334171 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 18 - 317
Target Start/End: Complemental strand, 4126119 - 4125823
Alignment:
| Q |
18 |
gatttttctgaaatttccagaaatgttgttaagtattctgggggattaccgctagctcttgaagtcctcgggtcctatttgtttgatagggagatattag |
117 |
Q |
| |
|
|||| |||||||||||| |||||||| ||||| |||||||||||||| || ||||||||||||||||| || ||||||||||||||||||||| ||| || |
|
|
| T |
4126119 |
gattattctgaaatttctagaaatgtagttaaatattctgggggattgccactagctcttgaagtccttggatcctatttgtttgatagggaggtatcag |
4126020 |
T |
|
| Q |
118 |
agtggatttgtgtattggagaaactcaaaataattcccaatgatcaagtacataagaagttaaaaataagctatgatggtttaaatgatgatactgagaa |
217 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| || || |
|
|
| T |
4126019 |
agtggatttgtgtattggagaaactcaaaagaattcccaatgatcaagtacataagaagttaaaaataagctatgatggtttaaa---tgatacagaaaa |
4125923 |
T |
|
| Q |
218 |
atcaatattccttgacatagcttgtttctttattgggatggaccgaaatgatgttattcaaatattaaatggctgtggacttttcgctgaaattggaata |
317 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||| |
|
|
| T |
4125922 |
atcaatattccttgacatagcttgtttcttaattgggatggaccgaaatgatgttattcttattttaaatggctgtggacttttcgctgaaattggaata |
4125823 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 16 - 317
Target Start/End: Complemental strand, 4322786 - 4322485
Alignment:
| Q |
16 |
aagatttttctgaaatttccagaaatgttgttaagtattctgggggattaccgctagctcttgaagtcctcgggtcctatttgtttgatagggagatatt |
115 |
Q |
| |
|
|||||||||| |||||||||| |||||| ||| ||||||||||| |||| |||||||||||||||||||| |||||||||||||||||||||||| || |
|
|
| T |
4322786 |
aagatttttcagaaatttccacaaatgtagttcagtattctgggagattgccgctagctcttgaagtccttgggtcctatttgtttgatagggaggtaac |
4322687 |
T |
|
| Q |
116 |
agagtggatttgtgtattggagaaactcaaaataattcccaatgatcaagtacataagaagttaaaaataagctatgatggtttaaatgatgatactgag |
215 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||| ||||| |||||||||||||| ||| |
|
|
| T |
4322686 |
agagtggatttgtgtattggagaaactcaaaagaattcccaatgatcaagtacatcagaagttaaaaataagctacgatggcttaaatgatgatacagag |
4322587 |
T |
|
| Q |
216 |
aaatcaatattccttgacatagcttgtttctttattgggatggaccgaaatgatgttattcaaatattaaatggctgtggacttttcgctgaaattggaa |
315 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| ||||| ||||||||||| | |||| ||||||| |||||||||| |
|
|
| T |
4322586 |
aaatcaatattccttgacattgcttgtttctttattgggatggatcgaaatgatgtcattcatatattaaatggttctggatttttcgcagaaattggaa |
4322487 |
T |
|
| Q |
316 |
ta |
317 |
Q |
| |
|
|| |
|
|
| T |
4322486 |
ta |
4322485 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 14 - 310
Target Start/End: Original strand, 4343258 - 4343553
Alignment:
| Q |
14 |
agaagatttttctgaaatttccagaaatgttgttaagtattctgggggattaccgctagctcttgaagtcctcgggtcctatttgtttgatagggagata |
113 |
Q |
| |
|
||||||||||||||||||||||| ||||| |||||||||| || |||||| || ||||||||||||||||| ||||||||||||||||| |||||| || |
|
|
| T |
4343258 |
agaagatttttctgaaatttccaaaaatga-gttaagtattgtgcgggattgcctctagctcttgaagtccttgggtcctatttgtttgagagggagcta |
4343356 |
T |
|
| Q |
114 |
ttagagtggatttgtgtattggagaaactcaaaataattcccaatgatcaagtacataagaagttaaaaataagctatgatggtttaaatgatgatactg |
213 |
Q |
| |
|
||||||||||||| |||||||||||||||||||| ||||||||||||| |||| ||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
4343357 |
ttagagtggatttctgtattggagaaactcaaaaaaattcccaatgatgaagtgcataagaagttaaaaataagctacgatggtttaaatgatgatacac |
4343456 |
T |
|
| Q |
214 |
agaaatcaatattccttgacatagcttgtttctttattgggatggaccgaaatgatgttattcaaatattaaatggctgtggacttttcgctgaaat |
310 |
Q |
| |
|
||||| ||||||||| |||||| |||||||||||||||||||||| |||||||||||||||| ||| |||||||||||||| ||||||| ||||| |
|
|
| T |
4343457 |
agaaagaaatattcctcgacatatcttgtttctttattgggatggatcgaaatgatgttattcgtatactaaatggctgtggatttttcgcagaaat |
4343553 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 14 - 317
Target Start/End: Original strand, 4358726 - 4359029
Alignment:
| Q |
14 |
agaagatttttctgaaatttccagaaatgttgttaagtattctgggggattaccgctagctcttgaagtcctcgggtcctatttgtttgatagggagata |
113 |
Q |
| |
|
||||||||||||||||||||||| |||||| ||||||||||||| |||||| || ||||||||||||||||| ||||| |||||||||||||||||||| |
|
|
| T |
4358726 |
agaagatttttctgaaatttccaaaaatgtagttaagtattctgcgggattgccactagctcttgaagtccttgggtcttatttgtttgatagggagatt |
4358825 |
T |
|
| Q |
114 |
ttagagtggatttgtgtattggagaaactcaaaataattcccaatgatcaagtacataagaagttaaaaataagctatgatggtttaaatgatgatactg |
213 |
Q |
| |
|
|||||||||| | ||||||||| ||||| |||| |||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
4358826 |
ttagagtggagatctgtattggataaactaaaaagaattcccaatgatcaagtgcataagaagttaaaaataagttatgatggtttaaatgatgatacac |
4358925 |
T |
|
| Q |
214 |
agaaatcaatattccttgacatagcttgtttctttattgggatggaccgaaatgatgttattcaaatattaaatggctgtggacttttcgctgaaattgg |
313 |
Q |
| |
|
||||| |||||||||||||||| |||||||||||||||| |||||||| ||||||||||||| |||||| ||||||||||| |||| || | |||||| |
|
|
| T |
4358926 |
agaaagaaatattccttgacatatcttgtttctttattggaatggaccggaatgatgttattcgtatattagatggctgtggattttttgcaggaattgg |
4359025 |
T |
|
| Q |
314 |
aata |
317 |
Q |
| |
|
|||| |
|
|
| T |
4359026 |
aata |
4359029 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 14 - 317
Target Start/End: Original strand, 4351545 - 4351848
Alignment:
| Q |
14 |
agaagatttttctgaaatttccagaaatgttgttaagtattctgggggattaccgctagctcttgaagtcctcgggtcctatttgtttgatagggagata |
113 |
Q |
| |
|
|||||||||||| |||||||||| |||||| |||||||| ||||| || || |||||||||||||||||||| |||||||| |||||||||||||| || |
|
|
| T |
4351545 |
agaagatttttccgaaatttccataaatgtagttaagtactctggagggttgccgctagctcttgaagtccttgggtcctacttgtttgatagggaagta |
4351644 |
T |
|
| Q |
114 |
ttagagtggatttgtgtattggagaaactcaaaataattcccaatgatcaagtacataagaagttaaaaataagctatgatggtttaaatgatgatactg |
213 |
Q |
| |
|
||||| |||||||||||||||||||||||| ||| ||||||||||| |||||| |||||| | ||||||||||||| |||||||||||||||| || | |
|
|
| T |
4351645 |
ttagactggatttgtgtattggagaaactccaaagtattcccaatgagcaagtatataagaggctaaaaataagctaccatggtttaaatgatgacacgg |
4351744 |
T |
|
| Q |
214 |
agaaatcaatattccttgacatagcttgtttctttattgggatggaccgaaatgatgttattcaaatattaaatggctgtggacttttcgctgaaattgg |
313 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||| ||||||||| |||| |||||||| | |||||||| |
|
|
| T |
4351745 |
agaaatcaatattccttgacatagcttgtttctttattgggatagacagaaatgatgttatttgtatattaaatagctgcagacttttcacagaaattgg |
4351844 |
T |
|
| Q |
314 |
aata |
317 |
Q |
| |
|
|||| |
|
|
| T |
4351845 |
aata |
4351848 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 28 - 317
Target Start/End: Complemental strand, 4135454 - 4135165
Alignment:
| Q |
28 |
aaatttccagaaatgttgttaagtattctgggggattaccgctagctcttgaagtcctcgggtcctatttgtttgatagggagatattagagtggatttg |
127 |
Q |
| |
|
||||||||| ||||||||| |||||| ||||||| | ||||| ||||| |||||||| |||||||| ||||||||||| || || | | ||| || |
|
|
| T |
4135454 |
aaatttccataaatgttgtctagtattgtgggggactcccgctggctctggaagtccttgggtcctacttgtttgatagacaggtaacaaaatgggagtg |
4135355 |
T |
|
| Q |
128 |
tgtattggagaaactcaaaataattccc-aatgatcaagtacataagaagttaaaaataagctatgatggtttaaatgatgatactgagaaatcaatatt |
226 |
Q |
| |
|
| |||||||||| ||||| | ||||||| ||||||||||| || |||||||| ||||||||||||||||||||||||||||| || |||| | ||||| |
|
|
| T |
4135354 |
tctattggagaa-ctcaagagaattccccaatgatcaagtgcaaaagaagttgaaaataagctatgatggtttaaatgatgacaccgagagagatatatt |
4135256 |
T |
|
| Q |
227 |
ccttgacatagcttgtttctttattgggatggaccgaaatgatgttattcaaatattaaatggctgtggacttttcgctgaaattggaata |
317 |
Q |
| |
|
||||||||| |||| |||||||||||||||||||||||| |||||||| | ||||||||||| ||||| ||||| |||||||| |||||| |
|
|
| T |
4135255 |
ccttgacattgcttttttctttattgggatggaccgaaacgatgttatggatatattaaatggttgtggtctttttgctgaaatcggaata |
4135165 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 18 - 317
Target Start/End: Original strand, 25568312 - 25568613
Alignment:
| Q |
18 |
gatttttctgaaatttccagaaatgttgttaagtattctgggggattaccgctagctcttgaagtcctcgggtcctatttgtttgatagggaga--tatt |
115 |
Q |
| |
|
|||||| ||||||||||||||||||| || |||||||||| ||||| ||||||||||| ||||| || ||||| |||||||||||||||| | || |
|
|
| T |
25568312 |
gattttgctgaaatttccagaaatgtaattgagtattctggaggattgccgctagctctagaagtgcttgggtcatatttgtttgataggggggggtaac |
25568411 |
T |
|
| Q |
116 |
agagtggatttgtgtattggagaaactcaaaataattcccaatgatcaagtacataagaagttaaaaataagctatgatggtttaaatgatgatactgag |
215 |
Q |
| |
|
||| ||| ||||||||| |||||||||| |||||| || | ||||||||| |||||||| |||||||||||||||| | |||||||||||||| || |
|
|
| T |
25568412 |
agaatgggagaatgtattggaaaaactcaaaagaattcctaacggtcaagtacaaaagaagttgaaaataagctatgatgctctaaatgatgatactcag |
25568511 |
T |
|
| Q |
216 |
aaatcaatattccttgacatagcttgtttctttattgggatggaccgaaatgatgttattcaaatattaaatggctgtggacttttcgctgaaattggaa |
315 |
Q |
| |
|
|| |||||||| ||||||||||||||||||||||| ||| ||||||| |||| || || ||||| ||||| |||| ||||| || |||||||||| |
|
|
| T |
25568512 |
gaagatatattcctcaacatagcttgtttctttattgggttggtccgaaataatgtaatacatatattgaatggttgtgaactttatgcagaaattggaa |
25568611 |
T |
|
| Q |
316 |
ta |
317 |
Q |
| |
|
|| |
|
|
| T |
25568612 |
ta |
25568613 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 163 - 316
Target Start/End: Complemental strand, 6499871 - 6499718
Alignment:
| Q |
163 |
aagtacataagaagttaaaaataagctatgatggtttaaatgatgatactgagaaatcaatattccttgacatagcttgtttctttattgggatggaccg |
262 |
Q |
| |
|
||||||| |||||||||||| |||||| |||||| ||||| |||| ||| |||||| ||||||||||| |||||||| |||||||||||||||||||| |
|
|
| T |
6499871 |
aagtacagaagaagttaaaagtaagctttgatggcttaaaagatgttacagagaaacacatattccttgatatagcttgcttctttattgggatggaccg |
6499772 |
T |
|
| Q |
263 |
aaatgatgttattcaaatattaaatggctgtggacttttcgctgaaattggaat |
316 |
Q |
| |
|
||||||||| || |||||||||||||| |||||| |||| ||||| |||||||| |
|
|
| T |
6499771 |
aaatgatgtaatacaaatattaaatgggtgtggattttttgctgatattggaat |
6499718 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 51 - 295
Target Start/End: Original strand, 6751178 - 6751422
Alignment:
| Q |
51 |
tattctgggggattaccgctagctcttgaagtcctcgggtcctatttgtttgatagggagatattagagtggatttgtgtattggagaaactcaaaataa |
150 |
Q |
| |
|
||||||||| ||||||| ||||| ||||||||||||||||||||||||| | | || ||| ||||||| | || |||||||| ||||| | |
|
|
| T |
6751178 |
tattctgggagattaccactagcacttgaagtcctcgggtcctatttgtcggcctgtgaaataacagagtggcataaagttttggagaagctcaagtgta |
6751277 |
T |
|
| Q |
151 |
ttcccaatgatcaagtacataagaagttaaaaataagctatgatggtttaaatgatgatactgagaaatcaatattccttgacatagcttgtttctttat |
250 |
Q |
| |
|
||||| ||||||||||| |||| ||| ||||| |||||| ||||||||||| ||| ||| |||||| |||||||||||| ||||| ||||||||||| |
|
|
| T |
6751278 |
ttccccatgatcaagtatataaaaagctaaaagtaagcttcgatggtttaaagtatgttacggagaaacaaatattccttgatatagcctgtttctttat |
6751377 |
T |
|
| Q |
251 |
tgggatggaccgaaatgatgttattcaaatattaaatggctgtgg |
295 |
Q |
| |
|
||| ||||||||||||||||| ||||||||||||||||| ||||| |
|
|
| T |
6751378 |
tggaatggaccgaaatgatgtaattcaaatattaaatgggtgtgg |
6751422 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 51 - 316
Target Start/End: Original strand, 6814105 - 6814370
Alignment:
| Q |
51 |
tattctgggggattaccgctagctcttgaagtcctcgggtcctatttgtttgatagggagatattagagtggatttgtgtattggagaaactcaaaataa |
150 |
Q |
| |
|
|||||||||||||| || ||||| ||||||||||||||||||||||||| ||| | || | | ||| ||| | || ||||||||||||||| | |
|
|
| T |
6814105 |
tattctgggggattgccactagcacttgaagtcctcgggtcctatttgtctgactgtgaaacaacagactggcataaagttttggagaaactcaaatgta |
6814204 |
T |
|
| Q |
151 |
ttcccaatgatcaagtacataagaagttaaaaataagctatgatggtttaaatgatgatactgagaaatcaatattccttgacatagcttgtttctttat |
250 |
Q |
| |
|
|||| ||||||||||||| | || ||||| |||||| ||||||||||| ||| ||| |||||| |||||||||||| ||||||||||||||||| |
|
|
| T |
6814205 |
ttcctcatgatcaagtacaggaaaaactaaaagtaagcttcgatggtttaaaagattttacagagaaacaaatattccttgatatagcttgtttctttat |
6814304 |
T |
|
| Q |
251 |
tgggatggaccgaaatgatgttattcaaatattaaatggctgtggacttttcgctgaaattggaat |
316 |
Q |
| |
|
||||| ||||||||||||||| || | |||||||||||| |||||| ||| ||||| |||||||| |
|
|
| T |
6814305 |
tgggagggaccgaaatgatgtaatacgaatattaaatgggtgtggatattttgctgatattggaat |
6814370 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 132 - 295
Target Start/End: Original strand, 6834580 - 6834743
Alignment:
| Q |
132 |
ttggagaaactcaaaataattcccaatgatcaagtacataagaagttaaaaataagctatgatggtttaaatgatgatactgagaaatcaatattccttg |
231 |
Q |
| |
|
||||||||||||||| |||||| ||||||||||||| |||||| ||| | |||||| |||||||||||| |||| ||| ||| || |||||| || | |
|
|
| T |
6834580 |
ttggagaaactcaaatgtattccccatgatcaagtacagaagaagctaagagtaagctttgatggtttaaaagatgttacagagcaacaaatatttctcg |
6834679 |
T |
|
| Q |
232 |
acatagcttgtttctttattgggatggaccgaaatgatgttattcaaatattaaatggctgtgg |
295 |
Q |
| |
|
| ||||| |||||||||||||||||||||| ||||||||| ||||||||||||||||| ||||| |
|
|
| T |
6834680 |
atatagcctgtttctttattgggatggaccaaaatgatgtaattcaaatattaaatgggtgtgg |
6834743 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 132 - 316
Target Start/End: Complemental strand, 6547458 - 6547274
Alignment:
| Q |
132 |
ttggagaaactcaaaataattcccaatgatcaagtacataagaagttaaaaataagctatgatggtttaaatgatgatactgagaaatcaatattccttg |
231 |
Q |
| |
|
||||||||||||||| |||||| ||||| ||||||| |||||| | ||| |||||| ||||||||||| |||| ||| || ||| ||||||||||| |
|
|
| T |
6547458 |
ttggagaaactcaaatgtattccccatgatgaagtacaaaagaagctgaaagtaagcttcgatggtttaaaagatgttacagacaaacaaatattccttg |
6547359 |
T |
|
| Q |
232 |
acatagcttgtttctttattgggatggaccgaaatgatgttattcaaatattaaatggctgtggacttttcgctgaaattggaat |
316 |
Q |
| |
|
| ||||||||||||||||||||||||||| |||||||| || |||||||||||||| ||| || |||| ||||| |||||||| |
|
|
| T |
6547358 |
atatagcttgtttctttattgggatggacaaaaatgatgcaatacaaatattaaatgggtgtagattttttgctgatattggaat |
6547274 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 132 - 316
Target Start/End: Original strand, 6649467 - 6649651
Alignment:
| Q |
132 |
ttggagaaactcaaaataattcccaatgatcaagtacataagaagttaaaaataagctatgatggtttaaatgatgatactgagaaatcaatattccttg |
231 |
Q |
| |
|
||||||||||||||| |||||| ||||||||||||| ||||| | ||| | |||| |||||||||||| |||| || |||||| ||||||||||| |
|
|
| T |
6649467 |
ttggagaaactcaaatgtattccccatgatcaagtacagaagaaactgaaagtcagctttgatggtttaaaagatgtaacagagaaacaaatattccttg |
6649566 |
T |
|
| Q |
232 |
acatagcttgtttctttattgggatggaccgaaatgatgttattcaaatattaaatggctgtggacttttcgctgaaattggaat |
316 |
Q |
| |
|
| || ||||||||||||||||| |||||||||||||||| || |||||||||||||| ||||| |||| ||||| |||||||| |
|
|
| T |
6649567 |
atattgcttgtttctttattggaatggaccgaaatgatgcaatacaaatattaaatgggagtggattttttgctgatattggaat |
6649651 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 132 - 316
Target Start/End: Original strand, 6674417 - 6674601
Alignment:
| Q |
132 |
ttggagaaactcaaaataattcccaatgatcaagtacataagaagttaaaaataagctatgatggtttaaatgatgatactgagaaatcaatattccttg |
231 |
Q |
| |
|
||||| ||||||||| || ||| ||||||||||||| |||||| | ||| |||||| ||||||||||| |||| ||| |||||| ||||||||||| |
|
|
| T |
6674417 |
ttggaaaaactcaaatgtatcccccatgatcaagtacaaaagaagctgaaagtaagcttcgatggtttaaaagatgttacagagaaacaaatattccttg |
6674516 |
T |
|
| Q |
232 |
acatagcttgtttctttattgggatggaccgaaatgatgttattcaaatattaaatggctgtggacttttcgctgaaattggaat |
316 |
Q |
| |
|
| |||||||| |||||||||||||||||||||||||||| || |||||||||||||| ||| | |||| ||||| |||||||| |
|
|
| T |
6674517 |
atatagcttgcttctttattgggatggaccgaaatgatgcaatacaaatattaaatgggtgtcaattttttgctgatattggaat |
6674601 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #16
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 51 - 316
Target Start/End: Original strand, 6756796 - 6757061
Alignment:
| Q |
51 |
tattctgggggattaccgctagctcttgaagtcctcgggtcctatttgtttgatagggagatattagagtggatttgtgtattggagaaactcaaaataa |
150 |
Q |
| |
|
||||||||| |||| || ||||| ||| ||||||| |||||| ||||| ||| | || ||| ||||||| | | || ||||||||||||||| | |
|
|
| T |
6756796 |
tattctgggagattgccactagcacttcaagtccttgggtcccgtttgtctgactgtgaaataacagagtggcatagggttttggagaaactcaaatgca |
6756895 |
T |
|
| Q |
151 |
ttcccaatgatcaagtacataagaagttaaaaataagctatgatggtttaaatgatgatactgagaaatcaatattccttgacatagcttgtttctttat |
250 |
Q |
| |
|
| || |||||||||| || || ||| ||||| |||||| ||||||| || |||| || |||||| |||||||||||| ||||||||||||||||| |
|
|
| T |
6756896 |
tccctcatgatcaagtgcagaataagctaaaagtaagcttcaatggtttgaaagatgtaacagagaaacaaatattccttgatatagcttgtttctttat |
6756995 |
T |
|
| Q |
251 |
tgggatggaccgaaatgatgttattcaaatattaaatggctgtggacttttcgctgaaattggaat |
316 |
Q |
| |
|
||||| |||| |||||||||| || |||||||||||||| |||||| |||| ||||| |||||||| |
|
|
| T |
6756996 |
tgggaaggacagaaatgatgtaatacaaatattaaatgggtgtggattttttgctgatattggaat |
6757061 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 132 - 296
Target Start/End: Original strand, 6714223 - 6714387
Alignment:
| Q |
132 |
ttggagaaactcaaaataattcccaatgatcaagtacataagaagttaaaaataagctatgatggtttaaatgatgatactgagaaatcaatattccttg |
231 |
Q |
| |
|
||||||||||||||| ||||| ||||||||||||| |||||| | ||| |||||| |||||||||||| |||| ||| |||||| ||||||| ||| |
|
|
| T |
6714223 |
ttggagaaactcaaatgtattcctcatgatcaagtacagaagaagctgaaagtaagctttgatggtttaaaagatgttacagagaaacaaatattctttg |
6714322 |
T |
|
| Q |
232 |
acatagcttgtttctttattgggatggaccgaaatgatgttattcaaatattaaatggctgtgga |
296 |
Q |
| |
|
| || |||||||||||||| ||||||||| ||||||| | || |||||||||||||| |||||| |
|
|
| T |
6714323 |
atattgcttgtttctttatcgggatggacaaaaatgatataatacaaatattaaatgggtgtgga |
6714387 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #18
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 132 - 316
Target Start/End: Original strand, 6794856 - 6795040
Alignment:
| Q |
132 |
ttggagaaactcaaaataattcccaatgatcaagtacataagaagttaaaaataagctatgatggtttaaatgatgatactgagaaatcaatattccttg |
231 |
Q |
| |
|
||||||||||| ||| ||||| ||||||||||||| |||| ||||| |||| | ||||||||||| ||| |||||||||| |||||| |||| |
|
|
| T |
6794856 |
ttggagaaactaaaatgtattcctcatgatcaagtacaagagaaactaaaagtaagtttcgatggtttaaaagattttactgagaaacaaatatttcttg |
6794955 |
T |
|
| Q |
232 |
acatagcttgtttctttattgggatggaccgaaatgatgttattcaaatattaaatggctgtggacttttcgctgaaattggaat |
316 |
Q |
| |
|
| |||||||| ||||||||||||||||| | |||||||| ||||||||||||||||| |||||| |||| ||||| |||||||| |
|
|
| T |
6794956 |
atatagcttgcttctttattgggatggatcaaaatgatgcaattcaaatattaaatgggtgtggattttttgctgatattggaat |
6795040 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #19
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 51 - 313
Target Start/End: Complemental strand, 6589673 - 6589411
Alignment:
| Q |
51 |
tattctgggggattaccgctagctcttgaagtcctcgggtcctatttgtttgatagggagatattagagtggatttgtgtattggagaaactcaaaataa |
150 |
Q |
| |
|
|||||||||||||| || ||||| ||||||||||| || ||||||||| || | || ||| |||||| | ||| ||||||||||||||| | |
|
|
| T |
6589673 |
tattctgggggattgccactagcacttgaagtccttggatcctatttggccgactgtgaaataactgagtggcaatatgttttggagaaactcaaatgca |
6589574 |
T |
|
| Q |
151 |
ttcccaatgatcaagtacataagaagttaaaaataagctatgatggtttaaatgatgatactgagaaatcaatattccttgacatagcttgtttctttat |
250 |
Q |
| |
|
|||| ||||||||||||| ||||| ||||| |||||| |||||||||| ||| ||| |||||| |||||||||||| || |||||||||||||| |
|
|
| T |
6589573 |
ttcctcatgatcaagtacaggagaagctaaaagtaagcttccatggtttaaaagattttacagagaaacaaatattccttgatattgcttgtttctttat |
6589474 |
T |
|
| Q |
251 |
tgggatggaccgaaatgatgttattcaaatattaaatggctgtggacttttcgctgaaattgg |
313 |
Q |
| |
|
|||||||||| ||| ||||| || || ||||||||||| ||||| |||| ||||| ||||| |
|
|
| T |
6589473 |
tgggatggacaaaaaggatgtaatacagatattaaatggttgtgggttttttgctgatattgg |
6589411 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #20
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 132 - 316
Target Start/End: Complemental strand, 6623984 - 6623800
Alignment:
| Q |
132 |
ttggagaaactcaaaataattcccaatgatcaagtacataagaagttaaaaataagctatgatggtttaaatgatgatactgagaaatcaatattccttg |
231 |
Q |
| |
|
||||||||||||||| |||||| ||||| ||||||| |||||| ||||| |||||| |||||||||||| |||| ||| ||| || ||||||||||| |
|
|
| T |
6623984 |
ttggagaaactcaaatgtattccccatgatgaagtacagaagaagctaaaagtaagctttgatggtttaaaagatgttacagagcaacaaatattccttg |
6623885 |
T |
|
| Q |
232 |
acatagcttgtttctttattgggatggaccgaaatgatgttattcaaatattaaatggctgtggacttttcgctgaaattggaat |
316 |
Q |
| |
|
| ||||| |||||||| ||||| ||||| |||||||| || ||||||||||||| ||||| |||| || || |||||||| |
|
|
| T |
6623884 |
atatagcctgtttcttgattggaatggataaaaatgatgcaataaaaatattaaatgggtgtgggttttttgcggatattggaat |
6623800 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 195 - 316
Target Start/End: Original strand, 6771681 - 6771802
Alignment:
| Q |
195 |
ggtttaaatgatgatactgagaaatcaatattccttgacatagcttgtttctttattgggatggaccgaaatgatgttattcaaatattaaatggctgtg |
294 |
Q |
| |
|
|||||||| ||| ||| |||||| |||||||||||| ||||||||||||||||||||| | ||| ||| ||||| || |||||||||||||| |||| |
|
|
| T |
6771681 |
ggtttaaaagattatatggagaaacaaatattccttgatatagcttgtttctttattggggtagacaaaaaggatgtaatacaaatattaaatgggtgtg |
6771780 |
T |
|
| Q |
295 |
gacttttcgctgaaattggaat |
316 |
Q |
| |
|
|| |||| ||||| |||||||| |
|
|
| T |
6771781 |
gattttttgctgatattggaat |
6771802 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 51 - 295
Target Start/End: Original strand, 6726261 - 6726508
Alignment:
| Q |
51 |
tattctgggggattaccgctagctcttgaagtcctcgggtcctatttgtttgatagggagatatta---gagtggatttgtgtattggagaaactcaaaa |
147 |
Q |
| |
|
|||||||||||||| || ||||| ||||||||| | ||||| ||||||| |||| | | ||| | |||||| | |||| ||||||||||||||| |
|
|
| T |
6726261 |
tattctgggggattgccactagcacttgaagtcattgggtcatatttgtctgattgtaaaataacaacagagtgggatagtgttttggagaaactcaaat |
6726360 |
T |
|
| Q |
148 |
taattcccaatgatcaagtacataagaagttaaaaataagctatgatggtttaaatgatgatactgagaaatcaatattccttgacatagcttgtttctt |
247 |
Q |
| |
|
||||| ||||| ||||||| |||| ||||| |||||| | |||||||||| || ||| |||||| |||||| ||||| |||||||||||||| |
|
|
| T |
6726361 |
gtattcctcatgatgaagtacaggagaaactaaaagtaagctttcatggtttaaaacattttacagagaaacaaatatttcttgatatagcttgtttctt |
6726460 |
T |
|
| Q |
248 |
tattgggatggaccgaaatgatgttattcaaatattaaatggctgtgg |
295 |
Q |
| |
|
||||||||||||| ||| |||| || |||||||| ||||| ||||| |
|
|
| T |
6726461 |
tattgggatggacaaaaaggatgcgatccaaatattgaatgggtgtgg |
6726508 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 157 - 259
Target Start/End: Complemental strand, 6535182 - 6535080
Alignment:
| Q |
157 |
atgatcaagtacataagaagttaaaaataagctatgatggtttaaatgatgatactgagaaatcaatattccttgacatagcttgtttctttattgggat |
256 |
Q |
| |
|
||||||||||||| |||||| ||| |||||| | |||||||||||| |||| ||| ||| || |||||||||||| ||||| |||||||| ||||| || |
|
|
| T |
6535182 |
atgatcaagtacaaaagaagctaagaataagttttgatggtttaaaagatgttacagagcaacaaatattccttgatatagcctgtttcttgattggaat |
6535083 |
T |
|
| Q |
257 |
gga |
259 |
Q |
| |
|
||| |
|
|
| T |
6535082 |
gga |
6535080 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 30 - 99
Target Start/End: Complemental strand, 7888416 - 7888347
Alignment:
| Q |
30 |
atttccagaaatgttgttaagtattctgggggattaccgctagctcttgaagtcctcgggtcctatttgt |
99 |
Q |
| |
|
||||||||| ||||||| ||||| ||||| ||||| |||||||||||| ||||| | ||||||| ||||| |
|
|
| T |
7888416 |
atttccagagatgttgtcaagtactctggaggattgccgctagctcttcaagtcattgggtcctttttgt |
7888347 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 221 - 287
Target Start/End: Complemental strand, 6501983 - 6501917
Alignment:
| Q |
221 |
aatattccttgacatagcttgtttctttattgggatggaccgaaatgatgttattcaaatattaaat |
287 |
Q |
| |
|
||||||| |||||||||| ||||||||||| |||||| || ||||||||| |||||| ||||||| |
|
|
| T |
6501983 |
aatattctttgacatagcatgtttctttatcgggatgagccaaaatgatgtacttcaaacattaaat |
6501917 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 221 - 287
Target Start/End: Complemental strand, 6592897 - 6592831
Alignment:
| Q |
221 |
aatattccttgacatagcttgtttctttattgggatggaccgaaatgatgttattcaaatattaaat |
287 |
Q |
| |
|
|||||||||||| ||||| ||| ||||| |||||||| ||| ||||||||| | |||||||||||| |
|
|
| T |
6592897 |
aatattccttgatatagcatgtctctttgttgggatgaacctaaatgatgtaaagcaaatattaaat |
6592831 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 182 - 262
Target Start/End: Complemental strand, 7888261 - 7888181
Alignment:
| Q |
182 |
aataagctatgatggtttaaatgatgatactgagaaatcaatattccttgacatagcttgtttctttattgggatggaccg |
262 |
Q |
| |
|
|||||| | ||||||||||| ||||||| || |||| ||||||||||| || |||| |||||||||||| |||||||| |
|
|
| T |
7888261 |
aataagttttgatggtttaagtgatgatgatgtgaaagatatattccttgatattgcttttttctttattggtatggaccg |
7888181 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 161; Significance: 8e-86; HSPs: 4)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 161; E-Value: 8e-86
Query Start/End: Original strand, 14 - 314
Target Start/End: Complemental strand, 36215578 - 36215278
Alignment:
| Q |
14 |
agaagatttttctgaaatttccagaaatgttgttaagtattctgggggattaccgctagctcttgaagtcctcgggtcctatttgtttgatagggagata |
113 |
Q |
| |
|
|||||||||| ||| ||||||||| ||||| ||| ||||||||||| | ||||| ||||||| |||||||| ||||| |||||||||||||||| |||| |
|
|
| T |
36215578 |
agaagattttgctggaatttccagcaatgtagttgagtattctgggcaactaccgttagctctggaagtccttgggtcatatttgtttgatagggggata |
36215479 |
T |
|
| Q |
114 |
ttagagtggatttgtgtattggagaaactcaaaataattcccaatgatcaagtacataagaagttaaaaataagctatgatggtttaaatgatgatactg |
213 |
Q |
| |
|
||||||||| ||||||||||| |||||||||| |||||||||||| |||||||| |||||||||||||| |||||||| ||| |||||||||| || | |
|
|
| T |
36215478 |
atagagtggaagtgtgtattggacaaactcaaaagaattcccaatgaccaagtacaaaagaagttaaaaatgagctatgaaggtctaaatgatgacacgg |
36215379 |
T |
|
| Q |
214 |
agaaatcaatattccttgacatagcttgtttctttattgggatggaccgaaatgatgttattcaaatattaaatggctgtggacttttcgctgaaattgg |
313 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||| || ||||||||||| ||| |||||| || |||||||| |
|
|
| T |
36215378 |
agaaagaaatattccttgacatagcttgtttctttattgggatggacagaaatgatgttatacatatattaaatggaagtgaactttttgcagaaattgg |
36215279 |
T |
|
| Q |
314 |
a |
314 |
Q |
| |
|
| |
|
|
| T |
36215278 |
a |
36215278 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 127 - 261
Target Start/End: Complemental strand, 34727307 - 34727173
Alignment:
| Q |
127 |
gtgtattggagaaactcaaaataattcccaatgatcaagtacataagaagttaaaaataagctatgatggtttaaatgatgatactgagaaatcaatatt |
226 |
Q |
| |
|
|||||||||||||||| ||| | |||||||||||| |||| ||||| | |||||||||| ||||||||||| ||||||| || |||| |||||| |
|
|
| T |
34727307 |
gtgtattggagaaactaaaactcattcccaatgatgaagtgttagagaagctcaaaataagctttgatggtttaagtgatgatgatgtgaaagaaatatt |
34727208 |
T |
|
| Q |
227 |
ccttgacatagcttgtttctttattgggatggacc |
261 |
Q |
| |
|
|||||| || |||| |||||||||||||||||||| |
|
|
| T |
34727207 |
ccttgatattgcttttttctttattgggatggacc |
34727173 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 100
Target Start/End: Complemental strand, 34730555 - 34730495
Alignment:
| Q |
40 |
atgttgttaagtattctgggggattaccgctagctcttgaagtcctcgggtcctatttgtt |
100 |
Q |
| |
|
||||||||||||| |||||||||| || ||||||||||||||| | ||||||| |||||| |
|
|
| T |
34730555 |
atgttgttaagtactctgggggatcgcctctagctcttgaagtcattgggtcctttttgtt |
34730495 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 40 - 100
Target Start/End: Complemental strand, 34735154 - 34735094
Alignment:
| Q |
40 |
atgttgttaagtattctgggggattaccgctagctcttgaagtcctcgggtcctatttgtt |
100 |
Q |
| |
|
||||||||||||| ||| ||||||| || ||||||||| ||||| | ||||||| |||||| |
|
|
| T |
34735154 |
atgttgttaagtactctaggggattgcctctagctcttcaagtcattgggtcctttttgtt |
34735094 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 158; Significance: 5e-84; HSPs: 22)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 158; E-Value: 5e-84
Query Start/End: Original strand, 16 - 317
Target Start/End: Complemental strand, 5068758 - 5068457
Alignment:
| Q |
16 |
aagatttttctgaaatttccagaaatgttgttaagtattctgggggattaccgctagctcttgaagtcctcgggtcctatttgtttgatagggagatatt |
115 |
Q |
| |
|
|||||||| ||| |||||||||||| || ||| |||||||||||||||| || |||||| | |||||||| ||||| |||||||||||||| ||| || |
|
|
| T |
5068758 |
aagattttgctgcaatttccagaaaggtcgttgagtattctgggggattgccactagctttggaagtccttgggtcatatttgtttgatagagaggtaac |
5068659 |
T |
|
| Q |
116 |
agagtggatttgtgtattggagaaactcaaaataattcccaatgatcaagtacataagaagttaaaaataagctatgatggtttaaatgatgatactgag |
215 |
Q |
| |
|
||| |||| |||||||||| |||||||||| |||||| ||| |||||||||| ||||||||| |||||||||||||| ||||||||||||||||||| |
|
|
| T |
5068658 |
agaatggaaaagtgtattggacaaactcaaaagaattcctaataatcaagtacaggagaagttaagaataagctatgatgctttaaatgatgatactgag |
5068559 |
T |
|
| Q |
216 |
aaatcaatattccttgacatagcttgtttctttattgggatggaccgaaatgatgttattcaaatattaaatggctgtggacttttcgctgaaattggaa |
315 |
Q |
| |
|
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||| || |||||||| ||||||||||||| |
|
|
| T |
5068558 |
aaagaaatattccttgacatagcttgtttctttattgggatggaccgaaatgatgttacacttatattaaatggatgcggactttttgctgaaattggaa |
5068459 |
T |
|
| Q |
316 |
ta |
317 |
Q |
| |
|
|| |
|
|
| T |
5068458 |
ta |
5068457 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 14 - 314
Target Start/End: Complemental strand, 5075417 - 5075117
Alignment:
| Q |
14 |
agaagatttttctgaaatttccagaaatgttgttaagtattctgggggattaccgctagctcttgaagtcctcgggtcctatttgtttgatagggagata |
113 |
Q |
| |
|
|||||||||| ||| |||||| |||||||| || |||||||||||||||| ||||||||||| ||||| | ||||| |||||||||||||||| |||| |
|
|
| T |
5075417 |
agaagattttgctggaatttcaagaaatgtagtggagtattctgggggattgccgctagctctacaagtcattgggtcatatttgtttgatagggggata |
5075318 |
T |
|
| Q |
114 |
ttagagtggatttgtgtattggagaaactcaaaataattcccaatgatcaagtacataagaagttaaaaataagctatgatggtttaaatgatgatactg |
213 |
Q |
| |
|
|||||||| ||||||||||||||||||| || |||||| ||||||||||| || |||||||||||||||||||||||||||||||| ||||| |||| |
|
|
| T |
5075317 |
gcagagtggaagtgtgtattggagaaactcataagaattcctaatgatcaagtgcagaagaagttaaaaataagctatgatggtttaaacgatgacactg |
5075218 |
T |
|
| Q |
214 |
agaaatcaatattccttgacatagcttgtttctttattgggatggaccgaaatgatgttattcaaatattaaatggctgtggacttttcgctgaaattgg |
313 |
Q |
| |
|
|||| ||||||||| ||||||||||||||||||||||||||||| ||||||||||||| | ||||||||||| |||| |||||| ||||||||||| |
|
|
| T |
5075217 |
agaagaaaatattcctcgacatagcttgtttctttattgggatggatcgaaatgatgttacacttatattaaatggatgtgaactttttgctgaaattgg |
5075118 |
T |
|
| Q |
314 |
a |
314 |
Q |
| |
|
| |
|
|
| T |
5075117 |
a |
5075117 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 66 - 317
Target Start/End: Complemental strand, 5148593 - 5148342
Alignment:
| Q |
66 |
ccgctagctcttgaagtcctcgggtcctatttgtttgatagggagatattagagtggatttgtgtattggagaaactcaaaataattcccaatgatcaag |
165 |
Q |
| |
|
||||||||||| ||||| | ||||| ||||| |||||||||| |||| ||||||||| ||||||||||| |||||||||| ||||||||||||||||| |
|
|
| T |
5148593 |
ccgctagctctggaagttattgggtcgtatttatttgatagggggataatagagtggaagtgtgtattggacaaactcaaaagaattcccaatgatcaag |
5148494 |
T |
|
| Q |
166 |
tacataagaagttaaaaataagctatgatggtttaaatgatgatactgagaaatcaatattccttgacatagcttgtttctttattgggatggaccgaaa |
265 |
Q |
| |
|
| || ||||||||||||||||||||||| | ||||||||||| | || |||| ||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5148493 |
tgcagaagaagttaaaaataagctatgacgatttaaatgatgttcttgtgaaagaaatattccttgacatagcttgtttctttattgggatggaccgaaa |
5148394 |
T |
|
| Q |
266 |
tgatgttattcaaatattaaatggctgtggacttttcgctgaaattggaata |
317 |
Q |
| |
|
|||||| || || |||||||||||||||| ||||| || |||||||||||| |
|
|
| T |
5148393 |
tgatgtcatacatatattaaatggctgtgaactttatgcagaaattggaata |
5148342 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 16 - 317
Target Start/End: Original strand, 5424071 - 5424372
Alignment:
| Q |
16 |
aagatttttctgaaatttccagaaatgttgttaagtattctgggggattaccgctagctcttgaagtcctcgggtcctatttgtttgatagggagatatt |
115 |
Q |
| |
|
|||||||| |||||||||| |||||||| ||| | |||||||| ||||| || |||||| | |||||||| ||||| |||||||| || || | ||| |
|
|
| T |
5424071 |
aagattttgctgaaatttctagaaatgtagttgattattctggtggattgccactagctttggaagtccttgggtcatatttgttcgacagagggattac |
5424170 |
T |
|
| Q |
116 |
agagtggatttgtgtattggagaaactcaaaataattcccaatgatcaagtacataagaagttaaaaataagctatgatggtttaaatgatgatactgag |
215 |
Q |
| |
|
||| |||| ||| |||||| |||||||||| |||||| ||| |||||||||| ||||||||| |||||||||||||| ||||||||||||||||||| |
|
|
| T |
5424171 |
agaatggaaaagtgcattggaaaaactcaaaagaattcctaataatcaagtacaggagaagttaagaataagctatgatgctttaaatgatgatactgag |
5424270 |
T |
|
| Q |
216 |
aaatcaatattccttgacatagcttgtttctttattgggatggaccgaaatgatgttattcaaatattaaatggctgtggacttttcgctgaaattggaa |
315 |
Q |
| |
|
||| ||||||||||||||||||||||||||||||||| |||||| |||||||||||| | ||||||||||| ||||||||||| ||||||||||||| |
|
|
| T |
5424271 |
aaagaaatattccttgacatagcttgtttctttattggaatggacagaaatgatgttacacttatattaaatggatgtggactttttgctgaaattggaa |
5424370 |
T |
|
| Q |
316 |
ta |
317 |
Q |
| |
|
|| |
|
|
| T |
5424371 |
ta |
5424372 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 26 - 301
Target Start/End: Original strand, 5175194 - 5175469
Alignment:
| Q |
26 |
tgaaatttccagaaatgttgttaagtattctgggggattaccgctagctcttgaagtcctcgggtcctatttgtttgatagggagatattagagtggatt |
125 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||||| ||| ||||||| ||||| || ||| |||||||||||| | | || || ||| |||| | |
|
|
| T |
5175194 |
tgaaatttccaaaaatgttgttaagtattctgggggattgccgttagctctagaagttcttgggcgctatttgtttgagaagaaggtaacagaatggaat |
5175293 |
T |
|
| Q |
126 |
tgtgtattggagaaactcaaaataattcccaatgatcaagtacataagaagttaaaaataagctatgatggtttaaatgatgatactgagaaatcaatat |
225 |
Q |
| |
|
||||||||| ||||||| ||| |||||| ||||| ||||||| |||||||||||||||||||||||||||||| | |||||| |||||||||||| |
|
|
| T |
5175294 |
tgtgtattgaagaaactagaaagaattcctaatgacaaagtacaaaagaagttaaaaataagctatgatggtttagacgatgattaccagaaatcaatat |
5175393 |
T |
|
| Q |
226 |
tccttgacatagcttgtttctttattgggatggaccgaaatgatgttattcaaatattaaatggctgtggactttt |
301 |
Q |
| |
|
|||| ||| |||||||||||||||||||||||||| ||||||||||||| || |||||||||||||||||| |||| |
|
|
| T |
5175394 |
tcctcgacgtagcttgtttctttattgggatggacagaaatgatgttatacatatattaaatggctgtggattttt |
5175469 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 16 - 317
Target Start/End: Complemental strand, 5356300 - 5355999
Alignment:
| Q |
16 |
aagatttttctgaaatttccagaaatgttgttaagtattctgggggattaccgctagctcttgaagtcctcgggtcctatttgtttgatagggagatatt |
115 |
Q |
| |
|
||||||| ||| ||||||||||||||| ||| |||||||||| ||||||||||| ||||| |||||||| ||||| |||||||| || |||||| || |
|
|
| T |
5356300 |
aagatttagctggaatttccagaaatgtagttgagtattctggaggattaccgctggctctagaagtccttgggtcgtatttgttcgacagggaggtagc |
5356201 |
T |
|
| Q |
116 |
agagtggatttgtgtattggagaaactcaaaataattcccaatgatcaagtacataagaagttaaaaataagctatgatggtttaaatgatgatactgag |
215 |
Q |
| |
|
|||||| ||| |||||||||||||||| |||||| || | |||||||| ||||| |||||||||||||||||||||||||||||||| | ||| |
|
|
| T |
5356200 |
ggagtggtacagtgccttggagaaactcaaaagaattcctaacaaccaagtacaaaagaaactaaaaataagctatgatggtttaaatgatgatgccgag |
5356101 |
T |
|
| Q |
216 |
aaatcaatattccttgacatagcttgtttctttattgggatggaccgaaatgatgttattcaaatattaaatggctgtggacttttcgctgaaattggaa |
315 |
Q |
| |
|
||| |||||| ||||||||||||||||||||||||||||| ||||||||||||| || | |||||||||||| |||||||||| ||||||||||||| |
|
|
| T |
5356100 |
aaagaaatatttcttgacatagcttgtttctttattgggatcgaccgaaatgatgctacactaatattaaatggatgtggactttatgctgaaattggaa |
5356001 |
T |
|
| Q |
316 |
ta |
317 |
Q |
| |
|
|| |
|
|
| T |
5356000 |
ta |
5355999 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 49 - 317
Target Start/End: Original strand, 5342045 - 5342313
Alignment:
| Q |
49 |
agtattctgggggattaccgctagctcttgaagtcctcgggtcctatttgtttgatagggagatattagagtggatttgtgtattggagaaactcaaaat |
148 |
Q |
| |
|
|||||| ||| ||||| ||||||||| | ||||| || || || |||||||||||||| | | | |||| |||| |||| ||| || ||||| |||| |
|
|
| T |
5342045 |
agtattgtggtggattgccgctagctttggaagttctaggctcatatttgtttgatagaggggcagtagaatggaactgtgcattagaaaaacttaaaag |
5342144 |
T |
|
| Q |
149 |
aattcccaatgatcaagtacataagaagttaaaaataagctatgatggtttaaatgatgatactgagaaatcaatattccttgacatagcttgtttcttt |
248 |
Q |
| |
|
|||||| || |||||||||| ||||||||||||||||||||||||||||||||||| || ||||||||| |||||| ||||||||||||||||||||| |
|
|
| T |
5342145 |
aattcctaacaatcaagtacaaaagaagttaaaaataagctatgatggtttaaatgacgagactgagaaagaaatatttcttgacatagcttgtttcttt |
5342244 |
T |
|
| Q |
249 |
attgggatggaccgaaatgatgttattcaaatattaaatggctgtggacttttcgctgaaattggaata |
317 |
Q |
| |
|
||||||||||||||||||||||| || |||||||||||||||||||||||||| || |||||||||||| |
|
|
| T |
5342245 |
attgggatggaccgaaatgatgtcatacaaatattaaatggctgtggactttttgcagaaattggaata |
5342313 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 29 - 317
Target Start/End: Original strand, 5348706 - 5348994
Alignment:
| Q |
29 |
aatttccagaaatgttgttaagtattctgggggattaccgctagctcttgaagtcctcgggtcctatttgtttgatagggagatattagagtggatttgt |
128 |
Q |
| |
|
||||||||||||||| ||| |||||||||| ||||| || |||||| | |||||||| ||||| | ||||||||||| | | || ||| |||| || |
|
|
| T |
5348706 |
aatttccagaaatgtagttgagtattctggaggattgccactagctttggaagtccttgggtcattattgtttgatagaggggtaacagaatggaaaagt |
5348805 |
T |
|
| Q |
129 |
gtattggagaaactcaaaataattcccaatgatcaagtacataagaagttaaaaataagctatgatggtttaaatgatgatactgagaaatcaatattcc |
228 |
Q |
| |
|
|||||||| |||||||||| |||||| ||| |||||||||| | ||||||| ||||||||| |||| ||| |||||||||||||||||| |||||||| |
|
|
| T |
5348806 |
gtattggacaaactcaaaagaattcctaataatcaagtacaggaaaagttaagaataagctacgatgctttgaatgatgatactgagaaagaaatattcc |
5348905 |
T |
|
| Q |
229 |
ttgacatagcttgtttctttattgggatggaccgaaatgatgttattcaaatattaaatggctgtggacttttcgctgaaattggaata |
317 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||| |||| |||||| ||||||||||||||| |
|
|
| T |
5348906 |
ttgacatagcttgtttctttattgggatggaccgaaatgatgttacacttatattaaatggatgtgaactttttgctgaaattggaata |
5348994 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 14 - 289
Target Start/End: Complemental strand, 5183638 - 5183363
Alignment:
| Q |
14 |
agaagatttttctgaaatttccagaaatgttgttaagtattctgggggattaccgctagctcttgaagtcctcgggtcctatttgtttgatagggagata |
113 |
Q |
| |
|
||||| |||| ||| |||||| |||||||| ||| |||||||||||||||| || |||||||| |||||||| || || ||||||||||||| || |||| |
|
|
| T |
5183638 |
agaaggttttgctggaatttcaagaaatgtagttgagtattctgggggattgccactagctctggaagtccttggatcatatttgtttgatatggggata |
5183539 |
T |
|
| Q |
114 |
ttagagtggatttgtgtattggagaaactcaaaataattcccaatgatcaagtacataagaagttaaaaataagctatgatggtttaaatgatgatactg |
213 |
Q |
| |
|
||| |||| |||| ||| || |||||||||| |||||| |||||||||||||| |||||||||||||||||||| |||| | ||| |||||| || | |
|
|
| T |
5183538 |
gaagaatggaagtgtgcattagaaaaactcaaaagaattcctaatgatcaagtacaaaagaagttaaaaataagctacgatgctctaagtgatgacaccg |
5183439 |
T |
|
| Q |
214 |
agaaatcaatattccttgacatagcttgtttctttattgggatggaccgaaatgatgttattcaaatattaaatgg |
289 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||||||||||| | ||||||||||| || ||||||||||| |
|
|
| T |
5183438 |
agaaagaaatattccttgacatagcttgtttctttattgggatggacaggaatgatgttatacatatattaaatgg |
5183363 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 26 - 301
Target Start/End: Original strand, 5277021 - 5277296
Alignment:
| Q |
26 |
tgaaatttccagaaatgttgttaagtattctgggggattaccgctagctcttgaagtcctcgggtcctatttgtttgatagggagatattagagtggatt |
125 |
Q |
| |
|
||||||||||| ||||||||||| ||||||||||||||| ||| ||||||| ||||| || ||| |||||||||||| | | || || ||| |||| | |
|
|
| T |
5277021 |
tgaaatttccaaaaatgttgttatgtattctgggggattgccgttagctctagaagttcttgggcgctatttgtttgagaagaaggtaacagaatggaat |
5277120 |
T |
|
| Q |
126 |
tgtgtattggagaaactcaaaataattcccaatgatcaagtacataagaagttaaaaataagctatgatggtttaaatgatgatactgagaaatcaatat |
225 |
Q |
| |
|
||||||||| ||||||| ||| |||||| ||||| ||||||| |||||||||||||||||||||||||||||| | |||||| |||||||||||| |
|
|
| T |
5277121 |
tgtgtattgaagaaactagaaagaattcctaatgacaaagtacaaaagaagttaaaaataagctatgatggtttagacgatgattaccagaaatcaatat |
5277220 |
T |
|
| Q |
226 |
tccttgacatagcttgtttctttattgggatggaccgaaatgatgttattcaaatattaaatggctgtggactttt |
301 |
Q |
| |
|
|||| ||| |||||||||||||||||||||||||| ||||||||||||| || |||||||||||||||||| |||| |
|
|
| T |
5277221 |
tcctcgacgtagcttgtttctttattgggatggacagaaatgatgttatacatatattaaatggctgtggattttt |
5277296 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 14 - 314
Target Start/End: Original strand, 5395359 - 5395659
Alignment:
| Q |
14 |
agaagatttttctgaaatttccagaaatgttgttaagtattctgggggattaccgctagctcttgaagtcctcgggtcctatttgtttga-tagggagat |
112 |
Q |
| |
|
|||||||||| | |||||||| |||||||| ||| |||||||||||||||| || |||||||| |||||||| || || |||||||||| | |||| | |
|
|
| T |
5395359 |
agaagattttgcagaaatttcaagaaatgtagttgagtattctgggggattgccactagctctggaagtccttggatcacatttgtttgaattgggat-t |
5395457 |
T |
|
| Q |
113 |
attagagtggatttgtgtattggagaaactcaaaataattcccaatgatcaagtacataagaagttaaaaataagctatgatggtttaaatgatgatact |
212 |
Q |
| |
|
| |||||||| |||||||| || ||| |||||| |||||| ||||||||||| || ||||||||||||||||||||||||| |||||||||||| ||| |
|
|
| T |
5395458 |
agcagagtggaagtgtgtattagaaaaaatcaaaagaattcctaatgatcaagttcaaaagaagttaaaaataagctatgatgctttaaatgatgacact |
5395557 |
T |
|
| Q |
213 |
gagaaatcaatattccttgacatagcttgtttctttattgggatggaccgaaatgatgttattcaaatattaaatggctgtggacttttcgctgaaattg |
312 |
Q |
| |
|
|||||| |||||||||||||||||||||||| ||||||||||||||| | ||||||||||| || ||||||||||| | | |||||| || ||||||| |
|
|
| T |
5395558 |
gagaaagaaatattccttgacatagcttgtttttttattgggatggacaggaatgatgttatacatatattaaatggtagcgaactttttgcagaaattg |
5395657 |
T |
|
| Q |
313 |
ga |
314 |
Q |
| |
|
|| |
|
|
| T |
5395658 |
ga |
5395659 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 26 - 317
Target Start/End: Original strand, 5094369 - 5094660
Alignment:
| Q |
26 |
tgaaatttccagaaatgttgttaagtattctgggggattaccgctagctcttgaagtcctcgggtcctatttgtttgatagggagatattagagtggatt |
125 |
Q |
| |
|
||||||||| |||||||| ||| ||||||||||||| || || ||||| | |||||||| ||||| ||||| || ||||||||| || ||| |||| |
|
|
| T |
5094369 |
tgaaatttctagaaatgtagttgagtattctggggggttgccactagcattggaagtccttgggtcatatttattcgatagggaggtaacagaatggaaa |
5094468 |
T |
|
| Q |
126 |
tgtgtattggagaaactcaaaataattcccaatgatcaagtacataagaagttaaaaataagctatgatggtttaaatgatgatactgagaaatcaatat |
225 |
Q |
| |
|
||| |||||| |||||||||| |||||| ||| ||||| |||| |||||||||| |||||||||||||| |||||||||||| | ||||||| ||||| |
|
|
| T |
5094469 |
agtgcattggacaaactcaaaagaattcctaataatcaattacagaagaagttaagaataagctatgatgctttaaatgatgacattgagaaagaaatat |
5094568 |
T |
|
| Q |
226 |
tccttgacatagcttgtttctttattgggatggaccgaaatgatgttattcaaatattaaatggctgtggacttttcgctgaaattggaata |
317 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||||| |||| | ||||||||||| ||||||||||| ||||||||||||||| |
|
|
| T |
5094569 |
tccttgatgtagcttgtttctttattgggatggaccgaaatgacgttacacttatattaaatggatgtggactttttgctgaaattggaata |
5094660 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 11 - 317
Target Start/End: Complemental strand, 5133594 - 5133288
Alignment:
| Q |
11 |
cacagaagatttttctgaaatttccagaaatgttgttaagtattctgggggattaccgctagctcttgaagtcctcgggtcctatttgtttgatagggag |
110 |
Q |
| |
|
|||| |||||||| |||||||||| ||| | || ||| |||||||||||||||| || |||||||| |||||||| ||||| |||||| | |||||| |
|
|
| T |
5133594 |
cacaaaagattttgctgaaatttctagagacgtagttgagtattctgggggattgcctctagctctagaagtccttgggtcatatttgctagataggagt |
5133495 |
T |
|
| Q |
111 |
atattagagtggatttgtgtattggagaaactcaaaataattcccaatgatcaagtacataagaagttaaaaataagctatgatggtttaaatgatgata |
210 |
Q |
| |
|
|| | |||||| ||||||||||||||||||| || |||||| ||| |||||||||| |||||| |||||||||||||||||| ||||||||| |||| |
|
|
| T |
5133494 |
gtaatcgagtggcaatgtgtattggagaaactcagaagaattcctaataatcaagtacaaaagaagctaaaaataagctatgatgctttaaatgaagata |
5133395 |
T |
|
| Q |
211 |
ctgagaaatcaatattccttgacatagcttgtttctttattgggatggaccgaaatgatgttattcaaatattaaatggctgtggacttttcgctgaaat |
310 |
Q |
| |
|
||||||| |||||||||| ||||||||||||| ||||||| |||||| ||||||||||| || ||||||||||| ||||||||||| || ||||| |
|
|
| T |
5133394 |
ttgagaaagaaatattccttaacatagcttgtttttttattgatatggacacaaatgatgttacacatatattaaatggttgtggactttttgccgaaat |
5133295 |
T |
|
| Q |
311 |
tggaata |
317 |
Q |
| |
|
||||||| |
|
|
| T |
5133294 |
tggaata |
5133288 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 16 - 317
Target Start/End: Original strand, 5368778 - 5369079
Alignment:
| Q |
16 |
aagatttttctgaaatttccagaaatgttgttaagtattctgggggattaccgctagctcttgaagtcctcgggtcctatttgtttgatagggagatatt |
115 |
Q |
| |
|
|||||||| || ||||||| |||||||| || |||||||||||||||| || |||||| | ||||| | ||||| ||||||||||| || | |||| |
|
|
| T |
5368778 |
aagattttgctaaaatttctagaaatgtagtggagtattctgggggattgccactagctttggaagttattgggtcatatttgtttgacagagggataac |
5368877 |
T |
|
| Q |
116 |
agagtggatttgtgtattggagaaactcaaaataattcccaatgatcaagtacataagaagttaaaaataagctatgatggtttaaatgatgatactgag |
215 |
Q |
| |
|
||| |||| ||| |||||| |||||||||| |||||| ||| |||||||||| |||||||||| |||||||||||||| ||||||||||||| |||| |
|
|
| T |
5368878 |
agaatggaaaagtgcattggacaaactcaaaagaattcctaataatcaagtacagaagaagttaagaataagctatgatgctttaaatgatgattatgag |
5368977 |
T |
|
| Q |
216 |
aaatcaatattccttgacatagcttgtttctttattgggatggaccgaaatgatgttattcaaatattaaatggctgtggacttttcgctgaaattggaa |
315 |
Q |
| |
|
||| |||||||||||| ||||||||||||||||||||| ||||||||||||||||| | |||||| |||| ||||||||||| ||||||||||||| |
|
|
| T |
5368978 |
aaagaaatattccttgatgtagcttgtttctttattgggaaggaccgaaatgatgttacacttatattagatggatgtggactttttgctgaaattggaa |
5369077 |
T |
|
| Q |
316 |
ta |
317 |
Q |
| |
|
|| |
|
|
| T |
5369078 |
ta |
5369079 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 54 - 317
Target Start/End: Original strand, 5382005 - 5382267
Alignment:
| Q |
54 |
tctgggggattaccgctagctcttgaagtcctcgggtcctatttgtttgatagggagatattagagtggatttgtgtattggagaaactcaaaataattc |
153 |
Q |
| |
|
||||||||||| || |||||||| |||||||| || || | ||||||||| |||| || ||| |||| ||||||||||||||| |||||||||||| |
|
|
| T |
5382005 |
tctgggggattgcctctagctctagaagtccttggttcttttttgtttgaaaggggagtagcagattggaagtgtgtattggagaaaatcaaaataattc |
5382104 |
T |
|
| Q |
154 |
ccaatgatcaagtacataagaagttaaaaataagctatgatggtttaaatgatgatactgagaaatcaatattccttgacatagcttgtttctttattgg |
253 |
Q |
| |
|
|||||||| ||||||| ||||||||||||||||||||||||||||||||| |||| || ||| ||||||||||||||||||||||||||||||| | |
|
|
| T |
5382105 |
ccaatgatgaagtacaacggaagttaaaaataagctatgatggtttaaatgacgatagcgaaaaagaaatattccttgacatagcttgtttctttatt-g |
5382203 |
T |
|
| Q |
254 |
gatggaccgaaatgatgttattcaaatattaaatggctgtggacttttcgctgaaattggaata |
317 |
Q |
| |
|
|||||||||||| ||||||| |||||||||||||| ||||| ||||| ||||| || |||||| |
|
|
| T |
5382204 |
gatggaccgaaacgatgttacacaaatattaaatgggtgtgggctttttgctgatatcggaata |
5382267 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 16 - 317
Target Start/End: Complemental strand, 5104556 - 5104255
Alignment:
| Q |
16 |
aagatttttctgaaatttccagaaatgttgttaagtattctgggggattaccgctagctcttgaagtcctcgggtcctatttgtttgatagggagatatt |
115 |
Q |
| |
|
|||||||| |||| |||| |||||||| ||| ||||||||||||| || || ||||| | |||||||| ||||| ||||| || ||||| || || |
|
|
| T |
5104556 |
aagattttattgaattttctagaaatgtagttgagtattctggggggttgccactagcattggaagtccttgggtcatatttattcgatagagaagtaag |
5104457 |
T |
|
| Q |
116 |
agagtggatttgtgtattggagaaactcaaaataattcccaatgatcaagtacataagaagttaaaaataagctatgatggtttaaatgatgatactgag |
215 |
Q |
| |
|
||| |||| || |||||| |||||||||| |||||| ||| |||||||||| |||||||||| ||||||||| ||||||||||||||||| | |||| |
|
|
| T |
5104456 |
agaatggaaaagtacattggacaaactcaaaagaattcctaataatcaagtacaaaagaagttaagaataagctacgatggtttaaatgatgacattgag |
5104357 |
T |
|
| Q |
216 |
aaatcaatattccttgacatagcttgtttctttattgggatggaccgaaatgatgttattcaaatattaaatggctgtggacttttcgctgaaattggaa |
315 |
Q |
| |
|
||| ||||||||| || |||||||||||||||||||||||||||||||||| |||| | |||||| |||| ||||||||||| || |||||||||| |
|
|
| T |
5104356 |
aaagaaatattcctcgatgtagcttgtttctttattgggatggaccgaaatgacgttacacttatattagatggatgtggactttttgcagaaattggaa |
5104257 |
T |
|
| Q |
316 |
ta |
317 |
Q |
| |
|
|| |
|
|
| T |
5104256 |
ta |
5104255 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 26 - 317
Target Start/End: Complemental strand, 5159175 - 5158884
Alignment:
| Q |
26 |
tgaaatttccagaaatgttgttaagtattctgggggattaccgctagctcttgaagtcctcgggtcctatttgtttgatagggagatattagagtggatt |
125 |
Q |
| |
|
||||||||| |||||||| ||||||||||||||||| || || ||||| | |||||||| ||||| |||| || |||||||| || ||| |||| |
|
|
| T |
5159175 |
tgaaatttctagaaatgtagttaagtattctggggggttgccactagcattggaagtcctagggtcacatttattcaatagggaggtaacagaatggaaa |
5159076 |
T |
|
| Q |
126 |
tgtgtattggagaaactcaaaataattcccaatgatcaagtacataagaagttaaaaataagctatgatggtttaaatgatgatactgagaaatcaatat |
225 |
Q |
| |
|
||| ||||| |||||||||| |||||| ||| |||||||||||||||||||| ||||||||| |||| |||||||||||| ||||||| ||||| |
|
|
| T |
5159075 |
agtgcgttggacaaactcaaaagaattcctaataatcaagtacataagaagttacgaataagctacgatgctttaaatgatgactttgagaaagaaatat |
5158976 |
T |
|
| Q |
226 |
tccttgacatagcttgtttctttattgggatggaccgaaatgatgttattcaaatattaaatggctgtggacttttcgctgaaattggaata |
317 |
Q |
| |
|
||||||| |||||||||||||||| ||||||||||||||||| |||| | ||||||||||| |||| |||||| | ||||||||||||| |
|
|
| T |
5158975 |
tccttgatgtagcttgtttctttatagggatggaccgaaatgacgttacacttatattaaatggatgtgaactttttggtgaaattggaata |
5158884 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 26 - 293
Target Start/End: Original strand, 5431735 - 5432002
Alignment:
| Q |
26 |
tgaaatttccagaaatgttgttaagtattctgggggattaccgctagctcttgaagtcctcgggtcctatttgtttgatagggagatattagagtggatt |
125 |
Q |
| |
|
||||||||| ||||||| |||| |||||| | |||||| ||||||||||| ||||| || ||| ||||||| ||| ||||| || ||| |||| |
|
|
| T |
5431735 |
tgaaatttctagaaatgccgttatgtattccgcgggattgccgctagctctagaagttcttgggcgatatttgtatgagagggatgtaacagaatggaaa |
5431834 |
T |
|
| Q |
126 |
tgtgtattggagaaactcaaaataattcccaatgatcaagtacataagaagttaaaaataagctatgatggtttaaatgatgatactgagaaatcaatat |
225 |
Q |
| |
|
|||||| ||||||||||||||| |||||||||| || ||||||| || ||||||||||||||||||||||||||| | ||| | | ||||| |||||| |
|
|
| T |
5431835 |
tgtgtactggagaaactcaaaacaattcccaataataaagtacaaaataagttaaaaataagctatgatggtttagacgataaatcccagaaagcaatat |
5431934 |
T |
|
| Q |
226 |
tccttgacatagcttgtttctttattgggatggaccgaaatgatgttattcaaatattaaatggctgt |
293 |
Q |
| |
|
|||||||||||||||||||||||||||| | ||| |||||||||||||| || ||| ||||||||||| |
|
|
| T |
5431935 |
tccttgacatagcttgtttctttattggtaaggagcgaaatgatgttatacatatactaaatggctgt |
5432002 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 38 - 317
Target Start/End: Complemental strand, 5261808 - 5261529
Alignment:
| Q |
38 |
aaatgttgttaagtattctgggggattaccgctagctcttgaagtcctcgggtcctatttgtttgatagggagatattagagtggatttgtgtattggag |
137 |
Q |
| |
|
|||||| ||| | |||| ||| ||||| ||||||||||| |||||||| ||||| ||||||||||||| | || || ||||| || |||||||||| |
|
|
| T |
5261808 |
aaatgtagttgaatattgtggaggattgccgctagctctcgaagtccttgggtcttatttgtttgataagacgaaatctaagtgggttcttgtattggag |
5261709 |
T |
|
| Q |
138 |
aaactcaaaataattcccaatgatcaagtacataagaagttaaaaataagctatgatggtttaaatgatgatactgagaaatcaatattccttgacatag |
237 |
Q |
| |
|
|||||||||| |||||| ||||||||||| || |||||||||| |||||| ||||||| ||| || ||||| |||| || |||||| |||||||||| |
|
|
| T |
5261708 |
aaactcaaaagaattcctaatgatcaagtgcagaagaagttaagaataagttatgatgatttgaaagatgacgatgagcaagaaatatttcttgacatag |
5261609 |
T |
|
| Q |
238 |
cttgtttctttattgggatggaccgaaatgatgttattcaaatattaaatggctgtggacttttcgctgaaattggaata |
317 |
Q |
| |
|
|||||||||| ||||| |||||||||||||||||||| | ||||||||| |||||||||| || |||||||||||| |
|
|
| T |
5261608 |
cttgtttcttaattggaatggaccgaaatgatgttatactcgtattaaatgactgtggacttcatgcagaaattggaata |
5261529 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 29 - 317
Target Start/End: Original strand, 5445411 - 5445696
Alignment:
| Q |
29 |
aatttccagaaatgttgttaagtattctgggggattaccgctagctcttgaagtcctcgggtcctatttgtttgatagggagatattagagtggatttgt |
128 |
Q |
| |
|
|||||||| |||||| ||| | ||||||| |||||| |||||||||||||||||||| ||||| ||||||||| ||| | | || ||||||| | |
|
|
| T |
5445411 |
aatttccaaaaatgtagttgaatattctgagggattgccgctagctcttgaagtccttgggtcttatttgtttaataagacggaatcagagtgggaactt |
5445510 |
T |
|
| Q |
129 |
gtattggagaaactcaaaataattcccaatgatcaagtacataagaagttaaaaataagctatgatggtttaaatgatgatactgagaaatcaatattcc |
228 |
Q |
| |
|
|||||||||| |||||||| |||||| |||||||||| || |||||||||| || || ||||||||||||||| ||| |||||||| |||||||| |
|
|
| T |
5445511 |
gtattggagacactcaaaagaattccttatgatcaagtgcagaagaagttaaggatgagttatgatggtttaaatcatg---ctgagaaagaaatattcc |
5445607 |
T |
|
| Q |
229 |
ttgacatagcttgtttctttattgggatggaccgaaatgatgttattcaaatattaaatggctgtggacttttcgctgaaattggaata |
317 |
Q |
| |
|
|| |||| |||||||||||| | |||||||||| |||||||||||| | ||||||||| || ||||||| || |||||||||||| |
|
|
| T |
5445608 |
ttcacattgcttgtttctttgtcgggatggaccaaaatgatgttatacttttattaaatgattgcggactttctgcagaaattggaata |
5445696 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #21
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 16 - 294
Target Start/End: Complemental strand, 5691795 - 5691517
Alignment:
| Q |
16 |
aagatttttctgaaatttccagaaatgttgttaagtattctgggggattaccgctagctcttgaagtcctcgggtcctatttgtttgatagggagatatt |
115 |
Q |
| |
|
|||||||| ||| | | |||| |||||| ||| |||||||||||||||| || |||||| | |||||||| ||||| |||| ||||| ||| | || |
|
|
| T |
5691795 |
aagattttgctgcattgtccaaaaatgtagttgagtattctgggggattgccactagctttggaagtccttgggtcacatttatttgacaggatggtaac |
5691696 |
T |
|
| Q |
116 |
agagtggatttgtgtattggagaaactcaaaataattcccaatgatcaagtacataagaagttaaaaataagctatgatggtttaaatgatgatactgag |
215 |
Q |
| |
|
||| ||| | |||||| | ||||||||| |||||| ||| |||||||||| || ||||||| |||||||||||||||||||| |||| |||| ||| |
|
|
| T |
5691695 |
agaatgggagagcgtattgaacaaactcaaagcaattcctaatcatcaagtacaaaaaaagttaagaataagctatgatggtttaagtgattatacggag |
5691596 |
T |
|
| Q |
216 |
aaatcaatattccttgacatagcttgtttctttattgggatggaccgaaatgatgttattcaaatattaaatggctgtg |
294 |
Q |
| |
|
||| ||||||||||||| | |||||||||||||||||||||| |||||||||||| | || |||||| |||| |||| |
|
|
| T |
5691595 |
aaagaaatattccttgacgtggcttgtttctttattgggatggttcgaaatgatgttgtacatatattagatggttgtg |
5691517 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #22
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 38 - 317
Target Start/End: Complemental strand, 5285805 - 5285528
Alignment:
| Q |
38 |
aaatgttgttaagtattctgggggattaccgctagctcttgaagtcctcgggtcctatttgtttgatagggagatattagagtggatttgtgtattggag |
137 |
Q |
| |
|
|||||| ||| | |||| ||| ||||| ||||||||||| |||||||| ||||| ||||||||||||| || | || ||||| | |||||||||| |
|
|
| T |
5285805 |
aaatgtagttgaatattgtggaggattgccgctagctctcgaagtccttgggtcttatttgtttgataaggcaaaatataagtgggatcttgtattggag |
5285706 |
T |
|
| Q |
138 |
aaactcaaaataattcccaatgatcaagtacataagaagttaaaaataagctatgatggtttaaatgatgatactgagaaatcaatattccttgacatag |
237 |
Q |
| |
|
||||||||||||||||| | ||||||| || |||||||||| |||||| ||||||| ||| || ||| || |||| || ||||||||||||| || |
|
|
| T |
5285705 |
aaactcaaaataattcctcacaatcaagtgcagaagaagttaagaataagttatgatgatttgaaagataatgatgagcaagaaatattccttgac--ag |
5285608 |
T |
|
| Q |
238 |
cttgtttctttattgggatggaccgaaatgatgttattcaaatattaaatggctgtggacttttcgctgaaattggaata |
317 |
Q |
| |
|
|||||||||| ||||| |||||| ||||||||||||| | ||||||||| ||||||||||| || |||||||||||| |
|
|
| T |
5285607 |
cttgtttcttaattggaatggacagaaatgatgttatactcgtattaaatgactgtggactttatgcagaaattggaata |
5285528 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 140; Significance: 3e-73; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 33 - 317
Target Start/End: Original strand, 8876136 - 8876422
Alignment:
| Q |
33 |
tccagaaatgttgttaagtattctgggggattaccgctagctcttgaagtcctcgggtcctatttgtttgatagggagatattagagtggatttgtgtat |
132 |
Q |
| |
|
||||||||||| ||| |||||||||||||||| || | |||||| ||||| || || || ||||||||||| |||| | || ||||||| ||||||| |
|
|
| T |
8876136 |
tccagaaatgtagttgagtattctgggggattgccaccagctctagaagttcttggatcatatttgtttgaaaggggggtagccgagtggaaatgtgtat |
8876235 |
T |
|
| Q |
133 |
tggagaaactcaaaataattcccaatgatcaagtacataagaagttaaaaataagctatgatggtttaaatgatgatactgagaaatcaatattccttga |
232 |
Q |
| |
|
|||| |||||||||| ||| |||||||||||||||||| |||||||||||||||||||||||||| |||||||||||| || |||| |||||||||||| |
|
|
| T |
8876236 |
tggaaaaactcaaaaaaatccccaatgatcaagtacatgagaagttaaaaataagctatgatggtctaaatgatgatattgcgaaagaaatattccttga |
8876335 |
T |
|
| Q |
233 |
catagcttgtttctttattgggatggaccgaaatgatgttattcaaata--ttaaatggctgtggacttttcgctgaaattggaata |
317 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| || ||| |||||||| |||| ||||| |||||||||||||| |
|
|
| T |
8876336 |
catagcttgtttctttattgggatggaccgaaatgatgttatacatatattttaaatgggtgtgaactttatcctgaaattggaata |
8876422 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0294 (Bit Score: 114; Significance: 9e-58; HSPs: 1)
Name: scaffold0294
Description:
Target: scaffold0294; HSP #1
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 120 - 301
Target Start/End: Complemental strand, 10248 - 10067
Alignment:
| Q |
120 |
tggatttgtgtattggagaaactcaaaataattcccaatgatcaagtacataagaagttaaaaataagctatgatggtttaaatgatgatactgagaaat |
219 |
Q |
| |
|
||||| ||||||||||||||| |||||||||||||||| ||| ||||||| |||||||||| |||||||||||||||||||||||||||| || ||| |
|
|
| T |
10248 |
tggatgtgtgtattggagaaaatcaaaataattcccaaagatgaagtacaacggaagttaaaagtaagctatgatggtttaaatgatgatacagaaaaag |
10149 |
T |
|
| Q |
220 |
caatattccttgacatagcttgtttctttattgggatggaccgaaatgatgttattcaaatattaaatggctgtggactttt |
301 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| ||||||||||| |
|
|
| T |
10148 |
atatattccttgacatagcttgtttctttattgggatggaccgaaacgatgttacacaaatattaaatggatgtggactttt |
10067 |
T |
|
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Target: chr2 (Bit Score: 101; Significance: 5e-50; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 17 - 317
Target Start/End: Complemental strand, 22586004 - 22585704
Alignment:
| Q |
17 |
agatttttctgaaatttccagaaatgttgttaagtattctgggggattaccgctagctcttgaagtcctcgggtcctatttgtttgatagggagatatta |
116 |
Q |
| |
|
|||||||||||||||||||| ||||| ||||| |||||||| || || ||||||||||| |||||||| ||| |||||||||| ||| | | || | |
|
|
| T |
22586004 |
agatttttctgaaatttccatgaatgtggttaattattctggagggttgccgctagctctggaagtccttgggcgttatttgtttgctagaggggtaaca |
22585905 |
T |
|
| Q |
117 |
gagtggatttgtgtattggagaaactcaaaataattcccaatgatcaagtacataagaagttaaaaataagctatgatggtttaaatgatgatactgaga |
216 |
Q |
| |
|
|| ||| |||||||||||||||||||||| |||||| ||||||||||| || |||||||||| |||||| ||||||| ||| | ||| | |||| |
|
|
| T |
22585904 |
gaatggcaatgtgtattggagaaactcaaaagaattcctaatgatcaagtgcagaagaagttaagaataagttatgatgatttggaagatactgatgagc |
22585805 |
T |
|
| Q |
217 |
aatcaatattccttgacatagcttgtttctttattgggatggaccgaaatgatgttattcaaatattaaatggctgtggacttttcgctgaaattggaat |
316 |
Q |
| |
|
|| |||||||||||||||||||| |||||| ||||| |||||||||||||||||||| | |||||||||| |||||||||| || ||||||||||| |
|
|
| T |
22585804 |
aagaaatattccttgacatagcttttttcttaattggaatggaccgaaatgatgttatactcatattaaatgactgtggacttcatgcagaaattggaat |
22585705 |
T |
|
| Q |
317 |
a |
317 |
Q |
| |
|
| |
|
|
| T |
22585704 |
a |
22585704 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0373 (Bit Score: 61; Significance: 4e-26; HSPs: 1)
Name: scaffold0373
Description:
Target: scaffold0373; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 132 - 316
Target Start/End: Complemental strand, 11445 - 11261
Alignment:
| Q |
132 |
ttggagaaactcaaaataattcccaatgatcaagtacataagaagttaaaaataagctatgatggtttaaatgatgatactgagaaatcaatattccttg |
231 |
Q |
| |
|
||||||||||| ||| ||||| ||||||||||||| |||| ||||| |||| | ||||| ||||| ||| |||||||||| |||||| |||| |
|
|
| T |
11445 |
ttggagaaactaaaatgtattcctcatgatcaagtacaagagaaactaaaagtaagtttcgatgggttaaaagattgtactgagaaacaaatatttcttg |
11346 |
T |
|
| Q |
232 |
acatagcttgtttctttattgggatggaccgaaatgatgttattcaaatattaaatggctgtggacttttcgctgaaattggaat |
316 |
Q |
| |
|
| |||||||| ||||||||||||||||| | |||||||| ||||||||||||||||| |||||| |||| ||||| |||||||| |
|
|
| T |
11345 |
atatagcttgcttctttattgggatggatcaaaatgatgcaattcaaatattaaatgggtgtggattttttgctgatattggaat |
11261 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 34; Significance: 0.0000000005; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 149 - 210
Target Start/End: Complemental strand, 3408763 - 3408702
Alignment:
| Q |
149 |
aattcccaatgatcaagtacataagaagttaaaaataagctatgatggtttaaatgatgata |
210 |
Q |
| |
|
|||||||||||||||||| || ||||| | | ||||||||||||||||||||| ||||||| |
|
|
| T |
3408763 |
aattcccaatgatcaagtgcacgagaagctgagaataagctatgatggtttaaaggatgata |
3408702 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 157 - 253
Target Start/End: Complemental strand, 3268661 - 3268565
Alignment:
| Q |
157 |
atgatcaagtacataagaagttaaaaataagctatgatggtttaaatgatgatactgagaaatcaatattccttgacatagcttgtttctttattgg |
253 |
Q |
| |
|
||||| |||| ||| |||| ||| ||||||||||||||||||||| ||||||| || || ||||| ||||||||| ||||||||||||||| |
|
|
| T |
3268661 |
atgataaagtgcatgagaaactaagaataagctatgatggtttaaagaatgatacagaaaaggatatatttcttgacatatgttgtttctttattgg |
3268565 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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