View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12651_low_12 (Length: 300)

Name: NF12651_low_12
Description: NF12651
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12651_low_12
NF12651_low_12
[»] chr5 (100 HSPs)
chr5 (28-170)||(22888591-22888733)
chr5 (28-166)||(25199154-25199292)
chr5 (28-170)||(29888981-29889123)
chr5 (1-170)||(23892327-23892505)
chr5 (63-167)||(13184582-13184686)
chr5 (63-167)||(13440428-13440532)
chr5 (28-167)||(11325918-11326057)
chr5 (28-167)||(33877371-33877510)
chr5 (170-259)||(23890894-23890983)
chr5 (170-259)||(25197702-25197791)
chr5 (28-170)||(9548442-9548584)
chr5 (28-170)||(24688056-24688198)
chr5 (170-284)||(9549946-9550060)
chr5 (28-170)||(22999013-22999155)
chr5 (170-284)||(23000517-23000631)
chr5 (28-170)||(23752349-23752491)
chr5 (28-170)||(30934754-30934896)
chr5 (170-284)||(33776132-33776246)
chr5 (28-170)||(33777608-33777750)
chr5 (170-259)||(24950780-24950869)
chr5 (30-170)||(37671384-37671524)
chr5 (170-284)||(11325117-11325231)
chr5 (28-170)||(11549475-11549617)
chr5 (170-284)||(13185373-13185487)
chr5 (170-284)||(13441219-13441333)
chr5 (28-170)||(15658659-15658801)
chr5 (28-170)||(18500629-18500771)
chr5 (28-170)||(23717887-23718029)
chr5 (170-284)||(24680082-24680196)
chr5 (170-284)||(24722609-24722723)
chr5 (28-170)||(24970139-24970281)
chr5 (170-284)||(33876570-33876684)
chr5 (171-284)||(2509696-2509809)
chr5 (171-284)||(5636555-5636668)
chr5 (171-284)||(6872947-6873060)
chr5 (171-284)||(8666879-8666992)
chr5 (171-284)||(9316096-9316209)
chr5 (171-284)||(12130800-12130913)
chr5 (171-284)||(15760261-15760374)
chr5 (171-284)||(18376816-18376929)
chr5 (171-284)||(26479037-26479150)
chr5 (171-284)||(30150663-30150776)
chr5 (30-166)||(13324730-13324866)
chr5 (30-170)||(31431561-31431701)
chr5 (30-170)||(37770888-37771028)
chr5 (170-284)||(31827822-31827936)
chr5 (28-170)||(32599371-32599513)
chr5 (167-284)||(3788189-3788306)
chr5 (170-259)||(29889283-29889372)
chr5 (171-284)||(29968470-29968583)
chr5 (171-284)||(30028060-30028173)
chr5 (219-284)||(30167114-30167179)
chr5 (171-284)||(33515001-33515114)
chr5 (167-284)||(37672874-37672991)
chr5 (167-284)||(43076912-43077029)
chr5 (30-166)||(24681565-24681701)
chr5 (30-166)||(24724092-24724228)
chr5 (30-170)||(37755101-37755241)
chr5 (30-166)||(40473450-40473586)
chr5 (30-170)||(43078373-43078513)
chr5 (170-256)||(24689560-24689646)
chr5 (28-170)||(28649356-28649498)
chr5 (28-170)||(31826306-31826448)
chr5 (28-170)||(33516477-33516619)
chr5 (167-284)||(13326226-13326343)
chr5 (171-284)||(15660146-15660259)
chr5 (167-284)||(18502130-18502247)
chr5 (167-284)||(31430091-31430208)
chr5 (167-284)||(37753631-37753748)
chr5 (167-284)||(37772381-37772498)
chr5 (167-284)||(40474934-40475051)
chr5 (167-283)||(33291196-33291312)
chr5 (168-284)||(34615184-34615300)
chr5 (225-284)||(41673372-41673431)
chr5 (28-170)||(9317572-9317714)
chr5 (28-170)||(12132276-12132418)
chr5 (170-256)||(23719386-23719472)
chr5 (28-170)||(30168590-30168732)
chr5 (167-284)||(28961181-28961298)
chr5 (243-284)||(37360113-37360154)
chr5 (30-170)||(2511172-2511312)
chr5 (30-170)||(8665376-8665516)
chr5 (30-170)||(15758758-15758898)
chr5 (185-256)||(30933309-30933380)
chr5 (28-170)||(29966965-29967107)
chr5 (28-170)||(30029536-30029678)
chr5 (28-170)||(30152139-30152281)
chr5 (243-284)||(28647889-28647930)
chr5 (167-284)||(32600851-32600968)
chr5 (30-170)||(3789662-3789802)
chr5 (30-170)||(28959687-28959827)
chr5 (30-170)||(34616639-34616779)
chr5 (28-170)||(18375311-18375453)
chr5 (28-170)||(26480513-26480655)
chr5 (36-170)||(37358550-37358684)
chr5 (30-170)||(6874426-6874566)
chr5 (30-166)||(33292650-33292786)
chr5 (30-170)||(41674830-41674970)
chr5 (28-170)||(5638031-5638173)
chr5 (174-256)||(11548027-11548109)
[»] chr2 (83 HSPs)
chr2 (28-170)||(21703155-21703297)
chr2 (28-170)||(27393077-27393219)
chr2 (63-167)||(27118799-27118903)
chr2 (63-170)||(19456447-19456554)
chr2 (63-167)||(3784765-3784869)
chr2 (63-167)||(34303329-34303433)
chr2 (72-167)||(34157122-34157217)
chr2 (63-167)||(16163710-16163814)
chr2 (30-170)||(40233619-40233759)
chr2 (170-259)||(21704656-21704745)
chr2 (170-256)||(27391672-27391758)
chr2 (28-173)||(20838023-20838168)
chr2 (170-259)||(34304102-34304191)
chr2 (167-259)||(19457892-19457984)
chr2 (170-256)||(27118044-27118130)
chr2 (28-170)||(27434435-27434577)
chr2 (170-284)||(31892145-31892259)
chr2 (170-259)||(27435938-27436027)
chr2 (28-170)||(12655650-12655792)
chr2 (28-170)||(23128557-23128699)
chr2 (28-170)||(28882322-28882464)
chr2 (170-284)||(34156321-34156435)
chr2 (28-173)||(260744-260889)
chr2 (170-284)||(3783964-3784078)
chr2 (170-284)||(12718100-12718214)
chr2 (170-284)||(16162909-16163023)
chr2 (28-170)||(37375269-37375411)
chr2 (171-284)||(11636684-11636797)
chr2 (171-284)||(11642873-11642986)
chr2 (171-284)||(21678678-21678791)
chr2 (171-284)||(22927524-22927637)
chr2 (171-284)||(31874913-31875026)
chr2 (29-170)||(34279557-34279698)
chr2 (171-284)||(34860312-34860425)
chr2 (171-284)||(37687405-37687518)
chr2 (171-284)||(37702670-37702783)
chr2 (171-284)||(37924125-37924238)
chr2 (167-284)||(39053303-39053420)
chr2 (63-170)||(31891354-31891461)
chr2 (28-166)||(12586922-12587060)
chr2 (28-166)||(27777334-27777472)
chr2 (28-166)||(27817092-27817230)
chr2 (171-284)||(16830834-16830947)
chr2 (171-284)||(16890534-16890647)
chr2 (171-284)||(19417995-19418108)
chr2 (171-284)||(32048430-32048543)
chr2 (167-284)||(37373811-37373928)
chr2 (167-284)||(40232149-40232266)
chr2 (30-166)||(12716595-12716731)
chr2 (30-170)||(32049906-32050046)
chr2 (28-166)||(13936535-13936673)
chr2 (28-170)||(16829329-16829471)
chr2 (28-170)||(16892010-16892152)
chr2 (170-256)||(20836578-20836664)
chr2 (28-166)||(27803819-27803957)
chr2 (28-166)||(39051813-39051951)
chr2 (167-284)||(262237-262354)
chr2 (167-284)||(9351468-9351585)
chr2 (167-284)||(12585451-12585568)
chr2 (167-284)||(13938018-13938135)
chr2 (167-284)||(27802342-27802459)
chr2 (30-170)||(34286462-34286602)
chr2 (30-170)||(34291522-34291662)
chr2 (225-284)||(34278099-34278158)
chr2 (28-166)||(9349973-9350111)
chr2 (170-256)||(12654202-12654288)
chr2 (170-256)||(23136888-23136974)
chr2 (170-256)||(28880874-28880960)
chr2 (28-170)||(37925601-37925743)
chr2 (167-284)||(27775857-27775974)
chr2 (167-284)||(27815624-27815741)
chr2 (167-284)||(39888712-39888829)
chr2 (30-170)||(21677175-21677315)
chr2 (225-284)||(40191084-40191143)
chr2 (28-170)||(31876389-31876531)
chr2 (28-170)||(34861788-34861930)
chr2 (28-170)||(37685900-37686042)
chr2 (28-170)||(37701165-37701307)
chr2 (30-170)||(22926021-22926161)
chr2 (30-170)||(11635179-11635319)
chr2 (30-170)||(11641368-11641508)
chr2 (30-170)||(19416492-19416632)
chr2 (30-170)||(39890182-39890322)
[»] chr1 (16 HSPs)
chr1 (28-170)||(16208033-16208175)
chr1 (32-166)||(20340341-20340475)
chr1 (63-170)||(20461192-20461299)
chr1 (28-173)||(28151970-28152115)
chr1 (170-259)||(20459768-20459857)
chr1 (170-259)||(16209530-16209619)
chr1 (170-259)||(20341145-20341234)
chr1 (170-256)||(28151724-28151810)
chr1 (171-284)||(10961305-10961418)
chr1 (171-284)||(28583616-28583729)
chr1 (171-284)||(41794815-41794928)
chr1 (171-284)||(51636853-51636966)
chr1 (30-170)||(51638329-51638469)
chr1 (28-170)||(10962781-10962923)
chr1 (28-170)||(28585092-28585234)
chr1 (30-170)||(41793312-41793452)
[»] chr6 (95 HSPs)
chr6 (28-166)||(27290315-27290453)
chr6 (36-170)||(22456887-22457021)
chr6 (63-170)||(22477253-22477360)
chr6 (28-166)||(14143230-14143368)
chr6 (28-166)||(26788057-26788195)
chr6 (28-166)||(27196430-27196568)
chr6 (28-166)||(27252672-27252810)
chr6 (63-167)||(33374236-33374340)
chr6 (72-167)||(8892299-8892394)
chr6 (72-167)||(8903534-8903629)
chr6 (28-167)||(13522018-13522157)
chr6 (63-167)||(28162769-28162873)
chr6 (170-259)||(27290617-27290706)
chr6 (28-170)||(22934825-22934967)
chr6 (28-170)||(23857270-23857412)
chr6 (170-284)||(26787776-26787890)
chr6 (170-282)||(14143535-14143647)
chr6 (170-282)||(27196151-27196263)
chr6 (170-282)||(27252977-27253089)
chr6 (170-284)||(27631158-27631272)
chr6 (170-259)||(22477911-22478000)
chr6 (28-170)||(16749963-16750105)
chr6 (170-284)||(26917014-26917128)
chr6 (28-170)||(26989110-26989252)
chr6 (170-284)||(28161968-28162082)
chr6 (30-170)||(4545722-4545862)
chr6 (170-284)||(8893081-8893195)
chr6 (170-284)||(8904316-8904430)
chr6 (28-170)||(13298896-13299038)
chr6 (170-284)||(13522844-13522958)
chr6 (28-170)||(24304563-24304705)
chr6 (28-170)||(24863826-24863968)
chr6 (28-170)||(26918489-26918631)
chr6 (28-170)||(29549584-29549726)
chr6 (170-284)||(33375027-33375141)
chr6 (171-284)||(16945477-16945590)
chr6 (167-284)||(26117847-26117964)
chr6 (171-284)||(29571646-29571759)
chr6 (30-170)||(4525395-4525535)
chr6 (30-170)||(4757873-4758013)
chr6 (30-170)||(4773115-4773255)
chr6 (30-170)||(27359939-27360079)
chr6 (30-170)||(27450282-27450422)
chr6 (30-170)||(34463293-34463433)
chr6 (28-170)||(27000182-27000324)
chr6 (167-284)||(3694753-3694870)
chr6 (167-284)||(4725571-4725688)
chr6 (30-167)||(27272527-27272664)
chr6 (171-284)||(30559466-30559579)
chr6 (167-284)||(34464789-34464906)
chr6 (30-170)||(4724081-4724221)
chr6 (30-170)||(26116357-26116497)
chr6 (30-170)||(27007836-27007976)
chr6 (185-256)||(15425781-15425852)
chr6 (28-170)||(15424262-15424404)
chr6 (28-170)||(16674248-16674390)
chr6 (170-284)||(16748488-16748601)
chr6 (170-256)||(24862378-24862464)
chr6 (28-170)||(30557961-30558103)
chr6 (167-284)||(4523940-4524057)
chr6 (167-284)||(4547212-4547329)
chr6 (167-284)||(26779056-26779173)
chr6 (167-284)||(27006363-27006480)
chr6 (167-284)||(27483768-27483885)
chr6 (167-284)||(28206093-28206210)
chr6 (30-166)||(17025390-17025526)
chr6 (173-256)||(26998733-26998816)
chr6 (225-284)||(27043040-27043099)
chr6 (28-170)||(3696190-3696332)
chr6 (170-256)||(13300400-13300486)
chr6 (170-256)||(22936309-22936395)
chr6 (170-256)||(23858754-23858840)
chr6 (170-256)||(24306067-24306153)
chr6 (170-256)||(26987665-26987751)
chr6 (225-283)||(29548130-29548188)
chr6 (28-170)||(29573122-29573264)
chr6 (167-284)||(16672778-16672895)
chr6 (167-284)||(17023913-17024030)
chr6 (199-284)||(29500057-29500142)
chr6 (63-166)||(20160814-20160917)
chr6 (63-166)||(22171914-22172017)
chr6 (28-170)||(16943972-16944114)
chr6 (28-170)||(26777560-26777702)
chr6 (243-284)||(4756412-4756453)
chr6 (243-284)||(4771648-4771689)
chr6 (170-259)||(27278906-27278995)
chr6 (170-259)||(27303797-27303886)
chr6 (30-170)||(28207563-28207703)
chr6 (30-170)||(29501524-29501664)
chr6 (168-258)||(20159396-20159486)
chr6 (168-258)||(22173345-22173435)
chr6 (30-170)||(27044496-27044637)
chr6 (167-284)||(27361438-27361555)
chr6 (167-284)||(27451781-27451898)
chr6 (30-170)||(27485238-27485378)
[»] scaffold0415 (2 HSPs)
scaffold0415 (28-170)||(1920-2061)
scaffold0415 (28-170)||(6124-6268)
[»] scaffold0124 (4 HSPs)
scaffold0124 (28-170)||(20500-20641)
scaffold0124 (170-257)||(19073-19161)
scaffold0124 (28-170)||(30564-30706)
scaffold0124 (170-256)||(29117-29203)
[»] chr7 (70 HSPs)
chr7 (28-170)||(16041436-16041578)
chr7 (36-169)||(16449894-16450027)
chr7 (28-166)||(2108893-2109031)
chr7 (28-166)||(26484811-26484949)
chr7 (63-167)||(31088387-31088491)
chr7 (63-167)||(45733576-45733680)
chr7 (28-166)||(2775476-2775614)
chr7 (28-166)||(39210911-39211049)
chr7 (170-259)||(16451387-16451476)
chr7 (170-284)||(39211216-39211330)
chr7 (170-259)||(2109198-2109287)
chr7 (170-259)||(16039988-16040077)
chr7 (28-170)||(5128105-5128247)
chr7 (170-259)||(16519807-16519896)
chr7 (28-148)||(4200682-4200802)
chr7 (170-256)||(18540663-18540749)
chr7 (170-256)||(26484558-26484644)
chr7 (171-259)||(16504772-16504860)
chr7 (28-170)||(2154686-2154828)
chr7 (170-256)||(2775223-2775309)
chr7 (170-284)||(5126629-5126743)
chr7 (170-284)||(31089178-31089292)
chr7 (28-170)||(5147228-5147370)
chr7 (28-170)||(10916756-10916898)
chr7 (28-170)||(11424664-11424806)
chr7 (170-284)||(11440197-11440311)
chr7 (28-170)||(16503268-16503410)
chr7 (28-170)||(26435370-26435512)
chr7 (170-284)||(45732775-45732889)
chr7 (171-284)||(4146516-4146629)
chr7 (171-284)||(9617288-9617401)
chr7 (171-284)||(24593934-24594047)
chr7 (171-284)||(26276487-26276600)
chr7 (171-284)||(26321262-26321375)
chr7 (167-284)||(26539244-26539361)
chr7 (171-284)||(26671307-26671420)
chr7 (171-284)||(45385980-45386093)
chr7 (30-170)||(31564280-31564420)
chr7 (170-284)||(3443931-3444045)
chr7 (28-170)||(16518304-16518446)
chr7 (171-284)||(16737853-16737966)
chr7 (171-284)||(16752907-16753020)
chr7 (171-284)||(17522169-17522282)
chr7 (171-284)||(17530933-17531046)
chr7 (167-284)||(26487115-26487232)
chr7 (93-148)||(26682953-26683008)
chr7 (170-256)||(2153237-2153323)
chr7 (28-170)||(3445419-3445561)
chr7 (170-256)||(10918257-10918343)
chr7 (28-170)||(26274982-26275124)
chr7 (167-284)||(5148711-5148828)
chr7 (167-284)||(26433912-26434029)
chr7 (167-284)||(31565770-31565887)
chr7 (28-170)||(4145011-4145153)
chr7 (28-170)||(26319757-26319899)
chr7 (28-170)||(26537758-26537900)
chr7 (28-170)||(11441685-11441827)
chr7 (28-170)||(45387456-45387598)
chr7 (167-284)||(31123566-31123683)
chr7 (30-166)||(16736350-16736486)
chr7 (30-166)||(16751404-16751540)
chr7 (30-166)||(17523649-17523785)
chr7 (30-166)||(17529430-17529566)
chr7 (28-170)||(9618764-9618906)
chr7 (174-256)||(11426172-11426254)
chr7 (28-170)||(24592429-24592571)
chr7 (28-170)||(26669802-26669944)
chr7 (167-284)||(5120115-5120232)
chr7 (30-166)||(18540916-18541052)
chr7 (30-170)||(31125033-31125173)
[»] chr8 (48 HSPs)
chr8 (28-170)||(22080839-22080981)
chr8 (72-167)||(19659044-19659139)
chr8 (72-167)||(44563216-44563311)
chr8 (63-167)||(33244780-33244884)
chr8 (72-167)||(9354737-9354832)
chr8 (170-259)||(16282113-16282202)
chr8 (170-256)||(22082319-22082405)
chr8 (170-259)||(33244525-33244614)
chr8 (28-170)||(16283561-16283703)
chr8 (170-259)||(19659808-19659897)
chr8 (28-170)||(16277666-16277808)
chr8 (28-170)||(27608866-27609008)
chr8 (28-168)||(18710700-18710840)
chr8 (170-284)||(9353936-9354050)
chr8 (28-170)||(14557736-14557878)
chr8 (171-284)||(19209826-19209939)
chr8 (171-284)||(31491216-31491329)
chr8 (171-284)||(33257359-33257472)
chr8 (30-170)||(12092687-12092827)
chr8 (30-170)||(29829434-29829574)
chr8 (170-256)||(2138724-2138810)
chr8 (170-284)||(18709222-18709336)
chr8 (28-170)||(19688210-19688352)
chr8 (170-284)||(44562415-44562529)
chr8 (171-284)||(28363421-28363534)
chr8 (170-256)||(14556291-14556377)
chr8 (29-170)||(2137221-2137362)
chr8 (167-284)||(3330964-3331081)
chr8 (167-284)||(12094177-12094294)
chr8 (167-284)||(19519587-19519704)
chr8 (167-284)||(19673092-19673209)
chr8 (167-284)||(29827967-29828084)
chr8 (219-284)||(31353158-31353223)
chr8 (30-170)||(3329470-3329610)
chr8 (225-284)||(19279989-19280048)
chr8 (225-284)||(19285119-19285178)
chr8 (170-256)||(16276218-16276304)
chr8 (28-170)||(19674553-19674695)
chr8 (170-256)||(19686762-19686848)
chr8 (170-256)||(21375004-21375090)
chr8 (170-256)||(27610370-27610456)
chr8 (28-170)||(31489711-31489853)
chr8 (30-170)||(19286574-19286714)
chr8 (28-170)||(33258835-33258977)
chr8 (28-120)||(189256-189348)
chr8 (30-169)||(31354637-31354776)
chr8 (28-170)||(19208321-19208463)
chr8 (28-170)||(28361916-28362058)
[»] scaffold0558 (2 HSPs)
scaffold0558 (28-170)||(30-172)
scaffold0558 (170-259)||(332-421)
[»] scaffold0260 (2 HSPs)
scaffold0260 (32-166)||(2664-2798)
scaffold0260 (170-259)||(3468-3557)
[»] chr4 (49 HSPs)
chr4 (28-170)||(15391340-15391482)
chr4 (36-169)||(15227998-15228131)
chr4 (28-170)||(1900384-1900526)
chr4 (63-170)||(15284965-15285072)
chr4 (63-167)||(24460642-24460746)
chr4 (28-169)||(14235527-14235668)
chr4 (167-257)||(15286410-15286500)
chr4 (170-256)||(15392822-15392908)
chr4 (28-170)||(17014127-17014269)
chr4 (170-259)||(1898936-1899025)
chr4 (174-259)||(15222721-15222806)
chr4 (28-170)||(24592316-24592458)
chr4 (170-284)||(24593817-24593931)
chr4 (28-170)||(14763306-14763448)
chr4 (28-170)||(36344517-36344659)
chr4 (171-284)||(14097192-14097305)
chr4 (30-170)||(33673802-33673942)
chr4 (28-170)||(6569980-6570122)
chr4 (36-170)||(14665145-14665279)
chr4 (170-284)||(24461433-24461547)
chr4 (28-170)||(31126520-31126662)
chr4 (170-284)||(33678850-33678964)
chr4 (170-259)||(14237013-14237102)
chr4 (171-284)||(21968352-21968465)
chr4 (171-284)||(31128025-31128138)
chr4 (171-284)||(40107145-40107258)
chr4 (30-166)||(21969832-21969968)
chr4 (30-166)||(39850769-39850905)
chr4 (170-256)||(14663697-14663783)
chr4 (167-284)||(6568522-6568639)
chr4 (167-284)||(39849292-39849409)
chr4 (225-284)||(5004539-5004598)
chr4 (225-284)||(14764847-14764906)
chr4 (225-284)||(36346055-36346114)
chr4 (225-284)||(54832059-54832118)
chr4 (28-170)||(14098668-14098810)
chr4 (170-256)||(17012679-17012765)
chr4 (28-170)||(18800615-18800757)
chr4 (170-284)||(30752393-30752507)
chr4 (28-170)||(40105640-40105782)
chr4 (243-284)||(18801505-18801546)
chr4 (167-284)||(19371930-19372047)
chr4 (30-170)||(54833514-54833654)
chr4 (28-170)||(5006000-5006142)
chr4 (167-284)||(34190442-34190559)
chr4 (30-170)||(30753881-30754021)
chr4 (30-166)||(34188964-34189100)
chr4 (30-166)||(24112793-24112929)
chr4 (30-170)||(27163321-27163461)
[»] scaffold0109 (2 HSPs)
scaffold0109 (28-172)||(21671-21815)
scaffold0109 (170-256)||(20249-20335)
[»] chr3 (126 HSPs)
chr3 (63-170)||(16626584-16626691)
chr3 (63-170)||(18530461-18530568)
chr3 (63-167)||(5652463-5652567)
chr3 (28-166)||(32292829-32292967)
chr3 (63-167)||(4626020-4626124)
chr3 (28-166)||(31034160-31034298)
chr3 (63-167)||(17993862-17993966)
chr3 (170-255)||(15728362-15728447)
chr3 (170-259)||(5649461-5649550)
chr3 (170-259)||(15335514-15335603)
chr3 (170-259)||(15894253-15894342)
chr3 (170-259)||(18529014-18529103)
chr3 (170-284)||(4625219-4625333)
chr3 (28-170)||(15741137-15741279)
chr3 (170-256)||(32292576-32292662)
chr3 (170-259)||(4686664-4686753)
chr3 (28-173)||(8296042-8296187)
chr3 (28-169)||(15892749-15892890)
chr3 (170-284)||(4720228-4720342)
chr3 (170-284)||(6190913-6191027)
chr3 (28-170)||(7073285-7073427)
chr3 (28-170)||(18330742-18330884)
chr3 (28-170)||(22387621-22387763)
chr3 (28-170)||(29148798-29148940)
chr3 (170-256)||(31034465-31034551)
chr3 (28-173)||(6192386-6192531)
chr3 (171-284)||(50135619-50135732)
chr3 (28-168)||(18051337-18051477)
chr3 (28-170)||(4346730-4346872)
chr3 (170-284)||(5712499-5712613)
chr3 (170-284)||(5723409-5723523)
chr3 (170-284)||(5757942-5758056)
chr3 (170-284)||(5768845-5768959)
chr3 (28-170)||(8301310-8301452)
chr3 (28-170)||(11110392-11110534)
chr3 (28-170)||(18277095-18277237)
chr3 (28-170)||(18292396-18292538)
chr3 (28-170)||(18307697-18307839)
chr3 (170-284)||(18329271-18329385)
chr3 (28-166)||(29665013-29665151)
chr3 (171-284)||(5012309-5012422)
chr3 (171-284)||(5610870-5610983)
chr3 (171-284)||(24326756-24326869)
chr3 (167-284)||(28019893-28020010)
chr3 (171-284)||(28337900-28338013)
chr3 (171-284)||(29150303-29150415)
chr3 (171-284)||(31966021-31966134)
chr3 (30-170)||(6542507-6542647)
chr3 (30-170)||(22870901-22871041)
chr3 (30-170)||(22885960-22886100)
chr3 (170-277)||(17994653-17994760)
chr3 (28-170)||(4416992-4417134)
chr3 (28-170)||(4796696-4796838)
chr3 (170-256)||(8294600-8294686)
chr3 (28-166)||(20576890-20577028)
chr3 (28-170)||(28115997-28116139)
chr3 (170-284)||(36998636-36998750)
chr3 (28-170)||(48466000-48466142)
chr3 (171-284)||(4415513-4415626)
chr3 (170-259)||(4886132-4886221)
chr3 (167-284)||(6544000-6544117)
chr3 (219-284)||(7995159-7995224)
chr3 (219-284)||(10641667-10641732)
chr3 (170-259)||(16628031-16628119)
chr3 (171-284)||(17986504-17986617)
chr3 (171-284)||(18223788-18223901)
chr3 (167-284)||(18241342-18241459)
chr3 (167-284)||(22872400-22872517)
chr3 (167-284)||(22887459-22887576)
chr3 (225-284)||(28117541-28117600)
chr3 (170-256)||(4798200-4798286)
chr3 (28-170)||(8211811-8211953)
chr3 (28-170)||(10396206-10396348)
chr3 (170-256)||(18049887-18049973)
chr3 (28-170)||(36997120-36997262)
chr3 (167-284)||(5465600-5465717)
chr3 (167-284)||(5597892-5598009)
chr3 (167-284)||(10394751-10394868)
chr3 (167-284)||(20578388-20578505)
chr3 (167-284)||(22389101-22389218)
chr3 (167-284)||(29666511-29666628)
chr3 (167-284)||(32437772-32437889)
chr3 (167-284)||(47022068-47022185)
chr3 (168-284)||(4348211-4348327)
chr3 (28-168)||(4721706-4721846)
chr3 (28-168)||(35880841-35880981)
chr3 (30-170)||(51782096-51782236)
chr3 (225-284)||(7071827-7071886)
chr3 (225-284)||(18278636-18278695)
chr3 (225-284)||(18293937-18293996)
chr3 (225-284)||(18309238-18309297)
chr3 (31-170)||(21674766-21674905)
chr3 (167-281)||(4891831-4891945)
chr3 (28-170)||(5713300-5713442)
chr3 (28-170)||(5724210-5724352)
chr3 (28-170)||(5757125-5757267)
chr3 (28-170)||(5768016-5768158)
chr3 (170-256)||(8302808-8302894)
chr3 (170-256)||(14448464-14448550)
chr3 (170-284)||(51780608-51780722)
chr3 (170-284)||(51795695-51795809)
chr3 (243-284)||(8210356-8210397)
chr3 (167-284)||(11111887-11112004)
chr3 (167-284)||(21673308-21673425)
chr3 (167-284)||(48464530-48464647)
chr3 (30-170)||(5609367-5609507)
chr3 (30-170)||(28339375-28339515)
chr3 (185-256)||(15742636-15742707)
chr3 (28-170)||(5467058-5467200)
chr3 (209-259)||(16467862-16467912)
chr3 (28-166)||(28021352-28021490)
chr3 (30-160)||(51797196-51797326)
chr3 (30-170)||(5013785-5013925)
chr3 (30-170)||(5596402-5596542)
chr3 (30-170)||(31964518-31964658)
chr3 (30-170)||(47023526-47023666)
chr3 (30-170)||(50134116-50134256)
chr3 (28-170)||(18225264-18225406)
chr3 (170-256)||(35879391-35879477)
chr3 (30-170)||(7996635-7996775)
chr3 (30-170)||(10643143-10643283)
chr3 (30-170)||(17985001-17985141)
chr3 (30-170)||(18242812-18242952)
chr3 (30-170)||(24328232-24328372)
chr3 (30-166)||(32439231-32439367)
chr3 (32-166)||(20066120-20066254)
[»] scaffold0639 (1 HSPs)
scaffold0639 (28-136)||(620-728)
[»] scaffold0089 (6 HSPs)
scaffold0089 (170-259)||(28424-28513)
scaffold0089 (28-170)||(46987-47129)
scaffold0089 (28-170)||(40071-40213)
scaffold0089 (28-170)||(29875-30017)
scaffold0089 (170-256)||(41575-41661)
scaffold0089 (170-256)||(48491-48577)
[»] scaffold0029 (2 HSPs)
scaffold0029 (28-170)||(131-273)
scaffold0029 (170-256)||(1636-1722)
[»] scaffold0350 (2 HSPs)
scaffold0350 (171-284)||(8746-8859)
scaffold0350 (28-170)||(7241-7383)
[»] scaffold0237 (2 HSPs)
scaffold0237 (171-284)||(16437-16550)
scaffold0237 (28-170)||(14932-15074)
[»] scaffold0336 (2 HSPs)
scaffold0336 (28-170)||(9678-9820)
scaffold0336 (167-284)||(6886-7003)
[»] scaffold0143 (3 HSPs)
scaffold0143 (28-170)||(27404-27546)
scaffold0143 (225-284)||(17658-17717)
scaffold0143 (170-256)||(25956-26042)
[»] scaffold0038 (2 HSPs)
scaffold0038 (167-284)||(6591-6708)
scaffold0038 (30-170)||(8061-8201)
[»] scaffold0131 (1 HSPs)
scaffold0131 (168-259)||(40322-40413)
[»] scaffold0159 (2 HSPs)
scaffold0159 (28-170)||(9068-9210)
scaffold0159 (28-170)||(20127-20269)
[»] scaffold0099 (1 HSPs)
scaffold0099 (170-259)||(49706-49798)
[»] scaffold0144 (1 HSPs)
scaffold0144 (28-160)||(26203-26335)


Alignment Details
Target: chr5 (Bit Score: 115; Significance: 2e-58; HSPs: 100)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 28 - 170
Target Start/End: Complemental strand, 22888733 - 22888591
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttg 127  Q
    ||||||||||||||||||||| |||||| |||| |||||||||||| ||||||||| |||| |||||||||||||||||||||||| |||||||||||||    
T  22888733 ggacattgttctcaaaagttaactttccttgatcaatgagcttcttcacaatgtacttcaaagcgtagcatccttcgacatcatgacccagagcaccttg 22888634  T
Q  128 atggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  22888633 atggaaatcacacttgaggtcagaacggaacctgggaggcaac 22888591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 28 - 166
Target Start/End: Complemental strand, 25199292 - 25199154
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttg 127  Q
    ||||||||||||||||||||| |||||| |||| |||||||||||| ||||||||| | || |||||||||||||||||||||||| |||||||||||||    
T  25199292 ggacattgttctcaaaagttaactttccttgatcaatgagcttcttcacaatgtactttaaagcgtagcatccttcgacatcatgacccagagcaccttg 25199193  T
Q  128 atggaaatcacacttgaggtcagaacggaacctgggagg 166  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  25199192 atggaaatcacacttgagatcagaacggaacctgggagg 25199154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 28 - 170
Target Start/End: Original strand, 29888981 - 29889123
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttg 127  Q
    ||||||||||||||||||| | |||||| |||| |||||||||||| || |||||| |||| || ||||||||||||||||||||| |||||||||||||    
T  29888981 ggacattgttctcaaaagtcaactttccttgatcaatgagcttcttcacgatgtacttcaaagcatagcatccttcgacatcatgacccagagcaccttg 29889080  T
Q  128 atggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    ||||||||||||  |||||||||| ||||||||||||||||||    
T  29889081 atggaaatcacatatgaggtcagaccggaacctgggaggcaac 29889123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 23892505 - 23892327
Alignment:
Q  1 cagcatgattcggaagaggattgttga---------ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgc 91  Q
    |||||||||||||||||||||||| ||         ||||||||||||||||||||| |||||| |||| |||||||||||| || |||||| |||  ||    
T  23892505 cagcatgattcggaagaggattgtcgaggacatgagggacattgttctcaaaagttaactttccttgatcaatgagcttcttcacgatgtacttcagagc 23892406  T
Q  92 gtagcatccttcgacatcatgatccagagcaccttgatggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
     ||||||| ||||||||||||| ||||||||||||||||||||||||| |||||||| || ||||||||||||||||||    
T  23892405 atagcatctttcgacatcatgacccagagcaccttgatggaaatcacatttgaggtcggaccggaacctgggaggcaac 23892327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 63 - 167
Target Start/End: Original strand, 13184582 - 13184686
Alignment:
Q  63 atgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttgatggaaatcacacttgaggtcagaacggaacctgg 162  Q
    ||||| || |||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| ||||||||| |||    
T  13184582 atgagtttttttacaatgtacctcaacgcgtagcatccttcgacatcatgacccatagcaccttgatggaaatcacacttgaggtccgaacggaacttgg 13184681  T
Q  163 gaggc 167  Q
    |||||    
T  13184682 gaggc 13184686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 63 - 167
Target Start/End: Original strand, 13440428 - 13440532
Alignment:
Q  63 atgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttgatggaaatcacacttgaggtcagaacggaacctgg 162  Q
    ||||| || |||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| ||||||||| |||    
T  13440428 atgagtttttttacaatgtacctcaacgcgtagcatccttcgacatcatgacccatagcaccttgatggaaatcacacttgaggtccgaacggaacttgg 13440527  T
Q  163 gaggc 167  Q
    |||||    
T  13440528 gaggc 13440532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 28 - 167
Target Start/End: Complemental strand, 11326057 - 11325918
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttg 127  Q
    |||| |||||||||||||| | |||||| || | |||||||||||| ||||||||  |||| || ||||||||||||||||||||| |||||||||||||    
T  11326057 ggacgttgttctcaaaagtcaactttccttggttaatgagcttcttcacaatgtatttcaaagcatagcatccttcgacatcatgacccagagcaccttg 11325958  T
Q  128 atggaaatcacacttgaggtcagaacggaacctgggaggc 167  Q
    |||||||||||| |||||||| ||||||||| ||||||||    
T  11325957 atggaaatcacatttgaggtccgaacggaacttgggaggc 11325918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 28 - 167
Target Start/End: Complemental strand, 33877510 - 33877371
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttg 127  Q
    |||| |||||||||||||| | |||||| || | |||||||||||| |||||||   |||| || ||||||||||||||||||||| |||||||||||||    
T  33877510 ggacgttgttctcaaaagtcaactttccttggttaatgagcttcttcacaatgtgtttcaaagcatagcatccttcgacatcatgacccagagcaccttg 33877411  T
Q  128 atggaaatcacacttgaggtcagaacggaacctgggaggc 167  Q
    ||||||||||||||||||||| ||||||||| ||||||||    
T  33877410 atggaaatcacacttgaggtccgaacggaacttgggaggc 33877371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 170 - 259
Target Start/End: Complemental strand, 23890983 - 23890894
Alignment:
Q  170 cagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagc 259  Q
    |||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| |||| || |||||||||||    
T  23890983 cagagcagtcatggtatcattggccttagccaattcttccctcagagaagctaactcggtacggagctgagcattttcctcttccatagc 23890894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 170 - 259
Target Start/End: Complemental strand, 25197791 - 25197702
Alignment:
Q  170 cagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagc 259  Q
    |||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||| |||| || |||||||||||    
T  25197791 cagagcagtcatggtatcattggccttagctaattcttccctcaaagaagctaactcggtacggagctgagcattttcctcttccatagc 25197702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 28 - 170
Target Start/End: Original strand, 9548442 - 9548584
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttg 127  Q
    ||||||| ||||||||||| |||||||| |||| |||||||||||| || || ||| |||| || ||||| || |||||||||||| | || ||||||||    
T  9548442 ggacattattctcaaaagtcagctttccttgatcaatgagcttcttcacgatatacttcaaagcatagcacccctcgacatcatgacctagggcaccttg 9548541  T
Q  128 atggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    ||| |||||||||||||| ||||| | |||||| |||||||||    
T  9548542 atgaaaatcacacttgagatcagacctgaaccttggaggcaac 9548584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 28 - 170
Target Start/End: Original strand, 24688056 - 24688198
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttg 127  Q
    ||||||| ||||||||||| |||||||| |||| ||||||||| || || || ||| |||| || ||||| || |||||||||||| ||||||| |||||    
T  24688056 ggacattattctcaaaagtcagctttccttgatcaatgagctttttcacgatatacttcaaagcatagcacccctcgacatcatgacccagagcgccttg 24688155  T
Q  128 atggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    |||||||||||| ||||| || || | ||||||||||||||||    
T  24688156 atggaaatcacatttgagatcggacctgaacctgggaggcaac 24688198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 170 - 284
Target Start/End: Original strand, 9549946 - 9550060
Alignment:
Q  170 cagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttcttt 269  Q
    |||||||||||||  |||||| || ||| ||||||| ||||| | ||  ||||||||||| ||||||||| | |||||||||||||||||| ||||||||    
T  9549946 cagagcagtcatgacatcattagctttagccaattcctcccttagagtggctaactcggtgcggagctgagcgttctcttcttccatagcctttttcttt 9550045  T
Q  270 cttctgtattctctg 284  Q
    |||||||||||||||    
T  9550046 cttctgtattctctg 9550060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 28 - 170
Target Start/End: Original strand, 22999013 - 22999155
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttg 127  Q
    ||||||| ||||||||||| |||||||| |||| |||||||||||| || || ||| |||| || ||||| || |||||||||||| | || ||||||||    
T  22999013 ggacattattctcaaaagtcagctttccttgatcaatgagcttcttcacgatatacttcaaagcatagcacccctcgacatcatgacctagggcaccttg 22999112  T
Q  128 atggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    ||| |||||||||||||| || || | |||||| |||||||||    
T  22999113 atgaaaatcacacttgagatcggacctgaaccttggaggcaac 22999155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 170 - 284
Target Start/End: Original strand, 23000517 - 23000631
Alignment:
Q  170 cagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttcttt 269  Q
    |||||||||||||  |||||| || ||| ||||||| ||||| | ||  ||||||||||||||||||||| | |||||||||||||||||| ||||| ||    
T  23000517 cagagcagtcatgacatcattagctttagccaattcctcccttagagtggctaactcggtacggagctgagcgttctcttcttccatagcctttttcctt 23000616  T
Q  270 cttctgtattctctg 284  Q
    |||||||||||||||    
T  23000617 cttctgtattctctg 23000631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 28 - 170
Target Start/End: Original strand, 23752349 - 23752491
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttg 127  Q
    ||||||| ||||||||||| |||||||| |||| |||||||||||| || || ||| |||| || ||||| || |||||||||||| | || ||||||||    
T  23752349 ggacattattctcaaaagtcagctttccttgatcaatgagcttcttcacgatatacttcaaagcatagcacccctcgacatcatgacctagggcaccttg 23752448  T
Q  128 atggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    ||| |||||||| |||||||| || | |||||| |||||||||    
T  23752449 atgaaaatcacatttgaggtcggacctgaaccttggaggcaac 23752491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 28 - 170
Target Start/End: Complemental strand, 30934896 - 30934754
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttg 127  Q
    ||||||| ||||||||||| |||||||| |||| |||||||||||| || || ||| |||| || ||||| || |||||||||||| |||| || |||||    
T  30934896 ggacattattctcaaaagtcagctttccttgatcaatgagcttcttcacgatatacttcaaagcatagcacccctcgacatcatgacccagggcgccttg 30934797  T
Q  128 atggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    ||| |||||||| ||||| || || | ||||||||||||||||    
T  30934796 atgaaaatcacatttgagatcggacctgaacctgggaggcaac 30934754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 170 - 284
Target Start/End: Complemental strand, 33776246 - 33776132
Alignment:
Q  170 cagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttcttt 269  Q
    |||||||||||||  |||||| || ||| ||||||| ||||| | ||  ||||||||||||||||||||| | |||||||||||||||||| ||||| ||    
T  33776246 cagagcagtcatgacatcattagctttagccaattcctcccttagagtggctaactcggtacggagctgagcgttctcttcttccatagcctttttcctt 33776147  T
Q  270 cttctgtattctctg 284  Q
    |||||||||||||||    
T  33776146 cttctgtattctctg 33776132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 28 - 170
Target Start/End: Complemental strand, 33777750 - 33777608
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttg 127  Q
    ||||||| ||||||||||| |||||||| |||| ||||||||| || || || ||| |||| |||||||| || |||||||||||| |||| || |||||    
T  33777750 ggacattattctcaaaagtcagctttccttgatcaatgagctttttcacgatatacttcaaagcgtagcacccctcgacatcatgacccagggcgccttg 33777651  T
Q  128 atggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    ||| |||||||| |||||||| || | |||||| |||||||||    
T  33777650 atgaaaatcacatttgaggtcggacctgaaccttggaggcaac 33777608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 170 - 259
Target Start/End: Complemental strand, 24950869 - 24950780
Alignment:
Q  170 cagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagc 259  Q
    |||||| ||||||||||||||||||||| ||||||||||||| | || |||||||||||||||||||||| | || ||||||||||||||    
T  24950869 cagagctgtcatggtatcattggccttagccaattcttcccttagagtagctaactcggtacggagctgagcgttttcttcttccatagc 24950780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 30 - 170
Target Start/End: Original strand, 37671384 - 37671524
Alignment:
Q  30 acattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttgat 129  Q
    ||||||||||||||||| ||||||||||||| |||||||||||| || || ||| |||| || || || || |||||||||||| | |  ||||||||||    
T  37671384 acattgttctcaaaagtcagctttccctgatcaatgagcttcttcacgatatacttcaaagcataacacccctcgacatcatgacctaaggcaccttgat 37671483  T
Q  130 ggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    | |||||||| ||||| ||||| | |||||| |||||||||    
T  37671484 gaaaatcacatttgagatcagacctgaaccttggaggcaac 37671524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 170 - 284
Target Start/End: Complemental strand, 11325231 - 11325117
Alignment:
Q  170 cagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttcttt 269  Q
    |||||||||||||  |||||| || ||| ||||||| ||||| | ||  ||||||||||||||||||||| | |||||||||||||||||| ||||| ||    
T  11325231 cagagcagtcatgacatcattagctttagccaattcctcccttagagtggctaactcggtacggagctgagcgttctcttcttccatagcctttttcctt 11325132  T
Q  270 cttctgtattctctg 284  Q
    |||||||| ||||||    
T  11325131 cttctgtactctctg 11325117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 28 - 170
Target Start/End: Complemental strand, 11549617 - 11549475
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttg 127  Q
    ||||||| ||||||||||| |||||||| |||| |||||||||||| || || ||| |||| || ||||| || |||||||||||| |||| || |||||    
T  11549617 ggacattattctcaaaagtcagctttccttgatcaatgagcttcttcacgatatacttcaaagcatagcacccctcgacatcatgacccagggcgccttg 11549518  T
Q  128 atggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    ||| |||||||| ||||| || || | |||||| |||||||||    
T  11549517 atgaaaatcacatttgagatcggacctgaaccttggaggcaac 11549475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 170 - 284
Target Start/End: Original strand, 13185373 - 13185487
Alignment:
Q  170 cagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttcttt 269  Q
    |||||||||||||  |||||| || ||| ||||||| ||||| | ||  ||||||||||||||||||||| | |||||||||||||||||| ||||| ||    
T  13185373 cagagcagtcatgacatcattagctttagccaattcctcccttagagtggctaactcggtacggagctgagcgttctcttcttccatagcctttttcctt 13185472  T
Q  270 cttctgtattctctg 284  Q
    |||||||| ||||||    
T  13185473 cttctgtactctctg 13185487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 170 - 284
Target Start/End: Original strand, 13441219 - 13441333
Alignment:
Q  170 cagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttcttt 269  Q
    |||||||||||||  |||||| || ||| ||||||| ||||| | ||  ||||||||||||||||||||| | |||||||||||||||||| ||||| ||    
T  13441219 cagagcagtcatgacatcattagctttagccaattcctcccttagagtggctaactcggtacggagctgagcgttctcttcttccatagcctttttcctt 13441318  T
Q  270 cttctgtattctctg 284  Q
    |||||||| ||||||    
T  13441319 cttctgtactctctg 13441333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 28 - 170
Target Start/End: Original strand, 15658659 - 15658801
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttg 127  Q
    ||||||| ||||||||||| |||||||| |||| |||||||||||| || || ||| |||| || || || || |||||||||||| | || ||||||||    
T  15658659 ggacattattctcaaaagtcagctttccttgatcaatgagcttcttcacgatatacttcaaagcataacacccctcgacatcatgacctagggcaccttg 15658758  T
Q  128 atggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    ||| |||||||| ||||| ||||| | |||||| |||||||||    
T  15658759 atgaaaatcacatttgagatcagacctgaaccttggaggcaac 15658801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 28 - 170
Target Start/End: Original strand, 18500629 - 18500771
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttg 127  Q
    ||||||| ||||||||||| ||||||||||||| |||||||||||| || || ||| |||| || || || || |||||||||||| | |  ||||||||    
T  18500629 ggacattattctcaaaagtcagctttccctgatcaatgagcttcttcacgatatacttcaaagcataacacccctcgacatcatgacctaaggcaccttg 18500728  T
Q  128 atggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    ||| |||||||| ||||| ||||| | |||||| |||||||||    
T  18500729 atgaaaatcacatttgagatcagacctgaaccttggaggcaac 18500771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 28 - 170
Target Start/End: Original strand, 23717887 - 23718029
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttg 127  Q
    ||||||| ||||||||||| |||||||| |||| |||||||||||| || || ||| |||| || ||||| || |||||||||||| |||| || |||||    
T  23717887 ggacattattctcaaaagtcagctttccttgatcaatgagcttcttcacgatatacttcaaagcatagcacccctcgacatcatgacccagggcgccttg 23717986  T
Q  128 atggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    ||| |||||||| ||||| || || | |||||| |||||||||    
T  23717987 atgaaaatcacatttgagatcggacctgaaccttggaggcaac 23718029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 170 - 284
Target Start/End: Complemental strand, 24680196 - 24680082
Alignment:
Q  170 cagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttcttt 269  Q
    |||||||||||||   ||||| || ||| ||||||||||||| | ||  ||||| ||||| || |||||| | |||||||||||||||||||||||||||    
T  24680196 cagagcagtcatgacgtcattagctttagccaattcttcccttagagtggctaattcggtgcgaagctgagcgttctcttcttccatagcccttttcttt 24680097  T
Q  270 cttctgtattctctg 284  Q
    |||||||||||||||    
T  24680096 cttctgtattctctg 24680082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 170 - 284
Target Start/End: Complemental strand, 24722723 - 24722609
Alignment:
Q  170 cagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttcttt 269  Q
    |||||||||||||   ||||| || ||| ||||||||||||| | ||  ||||| ||||| || |||||| | |||||||||||||||||||||||||||    
T  24722723 cagagcagtcatgacgtcattagctttagccaattcttcccttagagtggctaattcggtgcgaagctgagcgttctcttcttccatagcccttttcttt 24722624  T
Q  270 cttctgtattctctg 284  Q
    |||||||||||||||    
T  24722623 cttctgtattctctg 24722609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 28 - 170
Target Start/End: Complemental strand, 24970281 - 24970139
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttg 127  Q
    ||||||| |||||||||||  ||||||| |||| |||||||||||| || || ||| |||| || ||||| || |||||||||||| |||| || |||||    
T  24970281 ggacattattctcaaaagtccgctttccttgatcaatgagcttcttcacgatatacttcaaagcatagcacccctcgacatcatgacccagggcgccttg 24970182  T
Q  128 atggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    |||||||||||| ||||| || || | |||||| |||||||||    
T  24970181 atggaaatcacatttgagatcggacctgaaccttggaggcaac 24970139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 170 - 284
Target Start/End: Complemental strand, 33876684 - 33876570
Alignment:
Q  170 cagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttcttt 269  Q
    |||||||||||||  |||||| || ||| ||||||| ||||| | ||  ||||||||||||||||||||| | |||||||||||||||||| ||||| ||    
T  33876684 cagagcagtcatgacatcattagctttagccaattcctcccttagagtggctaactcggtacggagctgagcgttctcttcttccatagcctttttcctt 33876585  T
Q  270 cttctgtattctctg 284  Q
    |||||||| ||||||    
T  33876584 cttctgtactctctg 33876570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 171 - 284
Target Start/End: Complemental strand, 2509809 - 2509696
Alignment:
Q  171 agagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttctttc 270  Q
    ||||||||||||   ||||| || ||| ||||||| ||| | | ||| ||||||||||| || |||||| | ||||||||||||||||||||||||||||    
T  2509809 agagcagtcatgacgtcattagctttagccaattcctcctttagagaggctaactcggtgcgaagctgagcgttctcttcttccatagcccttttctttc 2509710  T
Q  271 ttctgtattctctg 284  Q
    ||||||||||||||    
T  2509709 ttctgtattctctg 2509696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 171 - 284
Target Start/End: Complemental strand, 5636668 - 5636555
Alignment:
Q  171 agagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttctttc 270  Q
    ||||||||||||   ||||| || ||| ||||||| ||| | | ||| ||||||||||| || |||||| | ||||||||||||||||||||||||||||    
T  5636668 agagcagtcatgacgtcattagctttagccaattcctcctttagagaggctaactcggtgcgaagctgagcgttctcttcttccatagcccttttctttc 5636569  T
Q  271 ttctgtattctctg 284  Q
    ||||||||||||||    
T  5636568 ttctgtattctctg 5636555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 171 - 284
Target Start/End: Complemental strand, 6873060 - 6872947
Alignment:
Q  171 agagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttctttc 270  Q
    ||||||||||||   ||||| || ||| ||||||| ||| | | ||| ||||||||||| || |||||| | ||||||||||||||||||||||||||||    
T  6873060 agagcagtcatgacgtcattagctttagccaattcctcctttagagaggctaactcggtgcgaagctgagcgttctcttcttccatagcccttttctttc 6872961  T
Q  271 ttctgtattctctg 284  Q
    ||||||||||||||    
T  6872960 ttctgtattctctg 6872947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 171 - 284
Target Start/End: Original strand, 8666879 - 8666992
Alignment:
Q  171 agagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttctttc 270  Q
    ||||||||||||   ||||| || ||| ||||||| ||| | | ||| ||||||||||| || |||||| | ||||||||||||||||||||||||||||    
T  8666879 agagcagtcatgacgtcattagctttagccaattcctcctttagagaggctaactcggtgcgaagctgagcgttctcttcttccatagcccttttctttc 8666978  T
Q  271 ttctgtattctctg 284  Q
    ||||||||||||||    
T  8666979 ttctgtattctctg 8666992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 171 - 284
Target Start/End: Complemental strand, 9316209 - 9316096
Alignment:
Q  171 agagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttctttc 270  Q
    ||||||||||||   ||||| || ||| ||||||| ||| | | ||| ||||||||||| || |||||| | ||||||||||||||||||||||||||||    
T  9316209 agagcagtcatgacgtcattagctttagccaattcctcctttagagaggctaactcggtgcgaagctgagcgttctcttcttccatagcccttttctttc 9316110  T
Q  271 ttctgtattctctg 284  Q
    ||||||||||||||    
T  9316109 ttctgtattctctg 9316096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 171 - 284
Target Start/End: Complemental strand, 12130913 - 12130800
Alignment:
Q  171 agagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttctttc 270  Q
    ||||||||||||   ||||| || ||| ||||||| ||| | | ||| ||||||||||| || |||||| | ||||||||||||||||||||||||||||    
T  12130913 agagcagtcatgacgtcattagctttagccaattcctcctttagagaggctaactcggtgcgaagctgagcgttctcttcttccatagcccttttctttc 12130814  T
Q  271 ttctgtattctctg 284  Q
    ||||||||||||||    
T  12130813 ttctgtattctctg 12130800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 171 - 284
Target Start/End: Original strand, 15760261 - 15760374
Alignment:
Q  171 agagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttctttc 270  Q
    ||||||||||||   ||||| || ||| ||||||| ||| | | ||| ||||||||||| || |||||| | ||||||||||||||||||||||||||||    
T  15760261 agagcagtcatgacgtcattagctttagccaattcctcctttagagaggctaactcggtgcgaagctgagcgttctcttcttccatagcccttttctttc 15760360  T
Q  271 ttctgtattctctg 284  Q
    ||||||||||||||    
T  15760361 ttctgtattctctg 15760374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 171 - 284
Target Start/End: Original strand, 18376816 - 18376929
Alignment:
Q  171 agagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttctttc 270  Q
    ||||||||||||   ||||| || ||| ||||||| ||| | | |||  |||||||||| ||||||||| | ||||||||||||||||||||||||||||    
T  18376816 agagcagtcatgacgtcattagctttagccaattcctcctttagagagactaactcggtgcggagctgagcgttctcttcttccatagcccttttctttc 18376915  T
Q  271 ttctgtattctctg 284  Q
    ||||||||||||||    
T  18376916 ttctgtattctctg 18376929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 171 - 284
Target Start/End: Complemental strand, 26479150 - 26479037
Alignment:
Q  171 agagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttctttc 270  Q
    ||||||||||||   ||||| || ||| ||||||| ||| | | ||| ||||||||||| || |||||| | ||||||||||||||||||||||||||||    
T  26479150 agagcagtcatgacgtcattagctttagccaattcctcctttagagaggctaactcggtgcgaagctgagcgttctcttcttccatagcccttttctttc 26479051  T
Q  271 ttctgtattctctg 284  Q
    ||||||||||||||    
T  26479050 ttctgtattctctg 26479037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 171 - 284
Target Start/End: Complemental strand, 30150776 - 30150663
Alignment:
Q  171 agagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttctttc 270  Q
    ||||||||||||   ||||| || ||| ||||||| ||| | | ||| ||||||||||| || |||||| | ||||||||||||||||||||||||||||    
T  30150776 agagcagtcatgacgtcattagctttagccaattcctcctttagagaggctaactcggtgcgaagctgagcgttctcttcttccatagcccttttctttc 30150677  T
Q  271 ttctgtattctctg 284  Q
    ||||||||||||||    
T  30150676 ttctgtattctctg 30150663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 30 - 166
Target Start/End: Original strand, 13324730 - 13324866
Alignment:
Q  30 acattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttgat 129  Q
    ||||| ||||||||||| ||||||||||||| |||||||||||| || || ||| |||| || || || || |||||||||||| | | |||||||||||    
T  13324730 acattattctcaaaagtcagctttccctgatcaatgagcttcttcacgatatacttcaaagcataacacccctcgacatcatgacctaaagcaccttgat 13324829  T
Q  130 ggaaatcacacttgaggtcagaacggaacctgggagg 166  Q
    | || ||||| ||||| ||||| |||||||| |||||    
T  13324830 gaaagtcacatttgagatcagagcggaaccttggagg 13324866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 30 - 170
Target Start/End: Complemental strand, 31431701 - 31431561
Alignment:
Q  30 acattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttgat 129  Q
    ||||| ||||||||||| ||||||||||||| |||||||||||| || || ||| |||| || || ||||| |||||||||||| | |  ||||||||||    
T  31431701 acattattctcaaaagtcagctttccctgatcaatgagcttcttcacgatatacttcaaagcataacatccctcgacatcatgacctaaggcaccttgat 31431602  T
Q  130 ggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    | || ||||| ||||| ||||| | |||||| |||||||||    
T  31431601 gaaagtcacatttgagatcagacctgaaccttggaggcaac 31431561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 30 - 170
Target Start/End: Original strand, 37770888 - 37771028
Alignment:
Q  30 acattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttgat 129  Q
    ||||||||||||||||| ||||||||||||| |||||||||||| |  || ||| |||| || || || || |||||||||||| | |  ||||||||||    
T  37770888 acattgttctcaaaagtcagctttccctgatcaatgagcttcttcatgatatacttcaaagcataacacccctcgacatcatgacctaaggcaccttgat 37770987  T
Q  130 ggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    | |||||||| ||||| ||||| | |||||| |||||||||    
T  37770988 gaaaatcacatttgagatcagacctgaaccttggaggcaac 37771028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 170 - 284
Target Start/End: Original strand, 31827822 - 31827936
Alignment:
Q  170 cagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttcttt 269  Q
    |||||||||||||   ||||| || ||| ||||||| ||||| | ||  ||||| ||||| || |||||| | |||||||||||||||||||||||||||    
T  31827822 cagagcagtcatgacgtcattagctttagccaattcctcccttagagtggctaattcggtgcgaagctgagcgttctcttcttccatagcccttttcttt 31827921  T
Q  270 cttctgtattctctg 284  Q
    |||||||||||||||    
T  31827922 cttctgtattctctg 31827936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 28 - 170
Target Start/End: Original strand, 32599371 - 32599513
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttg 127  Q
    ||||||| ||||||||||| ||||||||||||| |||||||||||| || || ||| |||| || || || || ||||| |||||| | |  ||||||||    
T  32599371 ggacattattctcaaaagtcagctttccctgatcaatgagcttcttcacgatatacttcaaagcataacacccctcgacgtcatgacctaatgcaccttg 32599470  T
Q  128 atggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    ||| |||||||| ||||| ||||| | |||||| |||||||||    
T  32599471 atgaaaatcacatttgagatcagacctgaaccttggaggcaac 32599513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 167 - 284
Target Start/End: Complemental strand, 3788306 - 3788189
Alignment:
Q  167 caacagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttc 266  Q
    ||||||||||||||| | |||||  || ||  ||||||| ||||| ||||| || || |||||||| |||||    ||||||||||||||||||||||||    
T  3788306 caacagagcagtcatagcatcatgagctttggccaattcctcccttaaagatgccaattcggtacgaagctgcgtgttctcttcttccatagcccttttc 3788207  T
Q  267 tttcttctgtattctctg 284  Q
    ||||||||||||||||||    
T  3788206 tttcttctgtattctctg 3788189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 170 - 259
Target Start/End: Original strand, 29889283 - 29889372
Alignment:
Q  170 cagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagc 259  Q
    |||||||||||||||||||||||||||  ||||||||||||||| |||||| |||||||| || ||||||   |||||||| ||||||||    
T  29889283 cagagcagtcatggtatcattggcctttgccaattcttccctcagagaagccaactcggtgcgaagctgagtgttctcttcctccatagc 29889372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 171 - 284
Target Start/End: Original strand, 29968470 - 29968583
Alignment:
Q  171 agagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttctttc 270  Q
    ||||||||||||   ||||| || ||| ||||||| ||| | | ||| || |||||||| || |||||| | ||||||||||||||||||||||||||||    
T  29968470 agagcagtcatgacgtcattagctttagccaattcctcctttagagaggccaactcggtgcgaagctgagcgttctcttcttccatagcccttttctttc 29968569  T
Q  271 ttctgtattctctg 284  Q
    ||||||||||||||    
T  29968570 ttctgtattctctg 29968583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 171 - 284
Target Start/End: Complemental strand, 30028173 - 30028060
Alignment:
Q  171 agagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttctttc 270  Q
    ||||||||||||   ||||| || ||| ||||||| ||| | | ||| || |||||||| || |||||| | ||||||||||||||||||||||||||||    
T  30028173 agagcagtcatgacgtcattagctttagccaattcctcctttagagaggccaactcggtgcgaagctgagcgttctcttcttccatagcccttttctttc 30028074  T
Q  271 ttctgtattctctg 284  Q
    ||||||||||||||    
T  30028073 ttctgtattctctg 30028060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 219 - 284
Target Start/End: Complemental strand, 30167179 - 30167114
Alignment:
Q  219 gctaactcggtacggagctgaacattctcttcttccatagcccttttctttcttctgtattctctg 284  Q
    ||||||||||| || |||||| | ||||||||||||||||||||||||||||||||||||||||||    
T  30167179 gctaactcggtgcgaagctgagcgttctcttcttccatagcccttttctttcttctgtattctctg 30167114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 171 - 284
Target Start/End: Complemental strand, 33515114 - 33515001
Alignment:
Q  171 agagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttctttc 270  Q
    ||||||||||||   ||||| || ||| ||||||| ||| | | ||| |||| |||||| || |||||| | ||||||||||||||||||||||||||||    
T  33515114 agagcagtcatgacgtcattagctttagccaattcctcctttagagaggctacctcggtgcgaagctgagcgttctcttcttccatagcccttttctttc 33515015  T
Q  271 ttctgtattctctg 284  Q
    ||||||||||||||    
T  33515014 ttctgtattctctg 33515001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 167 - 284
Target Start/End: Original strand, 37672874 - 37672991
Alignment:
Q  167 caacagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttc 266  Q
    ||||||||||||||| | |||||  || ||  ||||||| ||||| ||||| || || |||||||| |||||    ||||||||||||||||||||||||    
T  37672874 caacagagcagtcatagcatcatgagctttggccaattcctcccttaaagatgccaattcggtacgaagctgtgtgttctcttcttccatagcccttttc 37672973  T
Q  267 tttcttctgtattctctg 284  Q
    ||||||||||||||||||    
T  37672974 tttcttctgtattctctg 37672991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 167 - 284
Target Start/End: Complemental strand, 43077029 - 43076912
Alignment:
Q  167 caacagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttc 266  Q
    ||||||||||||||| | |||||  || ||  ||||||| ||||| ||||| || || |||||||| |||||    ||||||||||||||||||||||||    
T  43077029 caacagagcagtcatagcatcatgagctttggccaattcctcccttaaagatgccaattcggtacgaagctgcgtgttctcttcttccatagcccttttc 43076930  T
Q  267 tttcttctgtattctctg 284  Q
    ||||||||||||||||||    
T  43076929 tttcttctgtattctctg 43076912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 30 - 166
Target Start/End: Complemental strand, 24681701 - 24681565
Alignment:
Q  30 acattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttgat 129  Q
    ||||| ||||||||||| ||||||||||||| |||||||||||| || || ||| |||| || || || || |||||||||||| | |  ||||||||||    
T  24681701 acattattctcaaaagtcagctttccctgatcaatgagcttcttcacgatatacttcaaagcataacacccctcgacatcatgacctaaggcaccttgat 24681602  T
Q  130 ggaaatcacacttgaggtcagaacggaacctgggagg 166  Q
    | |||||||| || || ||||| |||||||| |||||    
T  24681601 gaaaatcacatttaagatcagagcggaaccttggagg 24681565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 30 - 166
Target Start/End: Complemental strand, 24724228 - 24724092
Alignment:
Q  30 acattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttgat 129  Q
    ||||| ||||||||||| ||||||||||||| |||||||||||| || || ||| |||| || || || || |||||||||||| | |  ||||||||||    
T  24724228 acattattctcaaaagtcagctttccctgatcaatgagcttcttcacgatatacttcaaagcataacacccctcgacatcatgacctaaggcaccttgat 24724129  T
Q  130 ggaaatcacacttgaggtcagaacggaacctgggagg 166  Q
    | |||||||| || || ||||| |||||||| |||||    
T  24724128 gaaaatcacatttaagatcagagcggaaccttggagg 24724092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 30 - 170
Target Start/End: Complemental strand, 37755241 - 37755101
Alignment:
Q  30 acattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttgat 129  Q
    ||||| ||||||||||| ||||||||||||| |||||||||||| || || ||| |||| || || || || |||||||||||| | |  ||||||||||    
T  37755241 acattattctcaaaagtcagctttccctgatcaatgagcttcttcacgatatacttcaaagcataacacccctcgacatcatgacctaaggcaccttgat 37755142  T
Q  130 ggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    | || ||||| ||||| ||||| | |||||| |||||||||    
T  37755141 gaaagtcacatttgagatcagacctgaaccttggaggcaac 37755101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 30 - 166
Target Start/End: Original strand, 40473450 - 40473586
Alignment:
Q  30 acattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttgat 129  Q
    ||||| ||||||||||| ||||||||||||| |||||||||||| || || ||| |||| || || || || |||||||||||| | |  ||||||||||    
T  40473450 acattattctcaaaagtcagctttccctgatcaatgagcttcttcacgatatacttcaaagcataacacccctcgacatcatgacctaaggcaccttgat 40473549  T
Q  130 ggaaatcacacttgaggtcagaacggaacctgggagg 166  Q
    | |||||||| || || ||||| |||||||| |||||    
T  40473550 gaaaatcacatttaagatcagagcggaaccttggagg 40473586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 30 - 170
Target Start/End: Complemental strand, 43078513 - 43078373
Alignment:
Q  30 acattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttgat 129  Q
    ||||| ||||||||||| ||||||||||||| || ||||||||| || || ||| |||| || || || || |||||||||||| | |  ||||||||||    
T  43078513 acattattctcaaaagtcagctttccctgatcaacgagcttcttcacgatatacttcaaagcataacacccctcgacatcatgacctaaggcaccttgat 43078414  T
Q  130 ggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    | |||||||| ||||| ||||| | |||||| |||||||||    
T  43078413 gaaaatcacatttgagatcagacctgaaccttggaggcaac 43078373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 170 - 256
Target Start/End: Original strand, 24689560 - 24689646
Alignment:
Q  170 cagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccat 256  Q
    |||||||||||||  |||||| |||||| ||||||||||||| | ||  ||||||||||||||||||||| |||| |||||||||||    
T  24689560 cagagcagtcatgacatcattagccttagccaattcttcccttagagtggctaactcggtacggagctgagcattttcttcttccat 24689646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 28 - 170
Target Start/End: Complemental strand, 28649498 - 28649356
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttg 127  Q
    ||||||| ||||||||||| ||||| || |||| |||||||||||| || || ||| |||| || || || || |||||||||||| | |  ||||||||    
T  28649498 ggacattattctcaaaagtcagcttcccttgatcaatgagcttcttcacgatatacttcaaagcataacacccctcgacatcatgacctaaggcaccttg 28649399  T
Q  128 atggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    ||| |||||||| ||||| ||||| | |||||| |||||||||    
T  28649398 atgaaaatcacatttgagatcagacctgaaccttggaggcaac 28649356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 28 - 170
Target Start/End: Original strand, 31826306 - 31826448
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttg 127  Q
    ||||||| ||||||||||| ||||| || |||| |||||||||||| ||||| ||| |||| || || || || |||||||||||| | |  ||||||||    
T  31826306 ggacattattctcaaaagtcagcttcccttgatcaatgagcttcttcacaatatacttcaaagcataacacccctcgacatcatgacctaaggcaccttg 31826405  T
Q  128 atggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    ||| || ||||| ||||| ||||| | |||||| |||||||||    
T  31826406 atgaaagtcacatttgagatcagacctgaaccttggaggcaac 31826448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 28 - 170
Target Start/End: Complemental strand, 33516619 - 33516477
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttg 127  Q
    ||||||| ||||||||||| ||||||||||||| |||||||||||| || || ||| |||| || || || || |||||||||||| | |  ||||||||    
T  33516619 ggacattattctcaaaagtcagctttccctgatcaatgagcttcttcacgatatacttcaaagcataacacccctcgacatcatgacctaaggcaccttg 33516520  T
Q  128 atggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    ||| || ||||| || || ||||| | |||||| |||||||||    
T  33516519 atgaaagtcacatttaagatcagacctgaaccttggaggcaac 33516477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 167 - 284
Target Start/End: Original strand, 13326226 - 13326343
Alignment:
Q  167 caacagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttc 266  Q
    ||||||||||||||| | |||||  || ||  ||||||| ||||| | ||| || || |||||||| |||||    ||||||||||||||||||||||||    
T  13326226 caacagagcagtcatagcatcatgagctttggccaattcctcccttagagatgccaattcggtacgaagctgtgtgttctcttcttccatagcccttttc 13326325  T
Q  267 tttcttctgtattctctg 284  Q
    ||||||||||||||||||    
T  13326326 tttcttctgtattctctg 13326343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 171 - 284
Target Start/End: Original strand, 15660146 - 15660259
Alignment:
Q  171 agagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttctttc 270  Q
    ||||||||||| | |||||  |||||  ||||||| ||| | | ||| || || ||||||||||||||    ||||||||||||||||||||||||||||    
T  15660146 agagcagtcatagcatcatgagccttggccaattcctcctttagagatgccaattcggtacggagctgcgtgttctcttcttccatagcccttttctttc 15660245  T
Q  271 ttctgtattctctg 284  Q
    ||||||||||||||    
T  15660246 ttctgtattctctg 15660259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 167 - 284
Target Start/End: Original strand, 18502130 - 18502247
Alignment:
Q  167 caacagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttc 266  Q
    ||||||||||||||| | |||||  || ||  ||||||| ||| | ||||| || || ||||||||||| ||  | ||||||||||||||||||||||||    
T  18502130 caacagagcagtcatagcatcatgagctttggccaattcctcctttaaagatgccaattcggtacggagttgcgcgttctcttcttccatagcccttttc 18502229  T
Q  267 tttcttctgtattctctg 284  Q
    |||||||| |||||||||    
T  18502230 tttcttctatattctctg 18502247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 167 - 284
Target Start/End: Complemental strand, 31430208 - 31430091
Alignment:
Q  167 caacagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttc 266  Q
    ||||||||||||||| | |||||  || ||  ||||||| ||||| | ||| || || |||||||| |||||    ||||||||||||||||||||||||    
T  31430208 caacagagcagtcatagcatcatgagctttggccaattcctcccttagagatgccaattcggtacgaagctgtgtgttctcttcttccatagcccttttc 31430109  T
Q  267 tttcttctgtattctctg 284  Q
    ||||||||||||||||||    
T  31430108 tttcttctgtattctctg 31430091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 167 - 284
Target Start/End: Complemental strand, 37753748 - 37753631
Alignment:
Q  167 caacagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttc 266  Q
    ||||||||||||||| | |||||  || ||  ||||||| ||||| ||||| || || |||||||| |||||    ||||||||||||||||||||||||    
T  37753748 caacagagcagtcatagcatcatgagctttggccaattcctcccttaaagatgccaattcggtacgaagctgcgtgttctcttcttccatagcccttttc 37753649  T
Q  267 tttcttctgtattctctg 284  Q
    |||||| |||||||||||    
T  37753648 tttcttttgtattctctg 37753631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 167 - 284
Target Start/End: Original strand, 37772381 - 37772498
Alignment:
Q  167 caacagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttc 266  Q
    ||||||||||||||| | |||||  || ||  ||||||| ||||| | ||| || || |||||||| |||||    ||||||||||||||||||||||||    
T  37772381 caacagagcagtcatagcatcatgagctttggccaattcctcccttagagatgccaattcggtacgaagctgtgtgttctcttcttccatagcccttttc 37772480  T
Q  267 tttcttctgtattctctg 284  Q
    ||||||||||||||||||    
T  37772481 tttcttctgtattctctg 37772498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 167 - 284
Target Start/End: Original strand, 40474934 - 40475051
Alignment:
Q  167 caacagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttc 266  Q
    ||||||||||||||| | |||||  || ||  ||||||| ||| | ||||| || || ||||||||||| ||  | ||||||||||||||||||||||||    
T  40474934 caacagagcagtcatagcatcatgagctttggccaattcctcctttaaagatgccaattcggtacggagttgcgcgttctcttcttccatagcccttttc 40475033  T
Q  267 tttcttctgtattctctg 284  Q
    |||||||| |||||||||    
T  40475034 tttcttctatattctctg 40475051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 167 - 283
Target Start/End: Complemental strand, 33291312 - 33291196
Alignment:
Q  167 caacagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttc 266  Q
    ||||||||||||||| | |||||  || ||  ||||||| ||||| | ||| || || ||||||||||||||    |||||||||||||||||| |||||    
T  33291312 caacagagcagtcatagcatcatgagctttggccaattcctcccttagagatgccaattcggtacggagctgcgtgttctcttcttccatagcctttttc 33291213  T
Q  267 tttcttctgtattctct 283  Q
    |||||||||||||||||    
T  33291212 tttcttctgtattctct 33291196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 168 - 284
Target Start/End: Complemental strand, 34615300 - 34615184
Alignment:
Q  168 aacagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttct 267  Q
    |||||||||||||| | |||||  || ||  ||||||| ||||| | ||| || || |||||||| |||||    |||||||||||||||||||||||||    
T  34615300 aacagagcagtcatagcatcatgagctttggccaattcctcccttagagatgccaattcggtacgaagctgtgtgttctcttcttccatagcccttttct 34615201  T
Q  268 ttcttctgtattctctg 284  Q
    |||||||||||||||||    
T  34615200 ttcttctgtattctctg 34615184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #74
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 225 - 284
Target Start/End: Complemental strand, 41673431 - 41673372
Alignment:
Q  225 tcggtacggagctgaacattctcttcttccatagcccttttctttcttctgtattctctg 284  Q
    ||||||||||||||    ||||||||||||||||||||||||||||||||||||||||||    
T  41673431 tcggtacggagctgcgtgttctcttcttccatagcccttttctttcttctgtattctctg 41673372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #75
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 28 - 170
Target Start/End: Complemental strand, 9317714 - 9317572
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttg 127  Q
    ||||||| ||||||||||| ||||| || ||||  ||||||||||| || || ||| |||| || || || || |||||||||||| | || ||||||||    
T  9317714 ggacattattctcaaaagtcagcttcccttgatcgatgagcttcttcacgatatacttcaaagcataacacccctcgacatcatgacctagggcaccttg 9317615  T
Q  128 atggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    ||| || ||||| ||||| ||||| | |||||| |||||||||    
T  9317614 atgaaagtcacatttgagatcagacctgaaccttggaggcaac 9317572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #76
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 28 - 170
Target Start/End: Complemental strand, 12132418 - 12132276
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttg 127  Q
    ||||||| ||||||||||| ||||| || ||||  ||||||||||| || || ||| |||| || || || || |||||||||||| | || ||||||||    
T  12132418 ggacattattctcaaaagtcagcttcccttgatcgatgagcttcttcacgatatacttcaaagcataacacccctcgacatcatgacctagggcaccttg 12132319  T
Q  128 atggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    ||| || ||||| ||||| ||||| | |||||| |||||||||    
T  12132318 atgaaagtcacatttgagatcagacctgaaccttggaggcaac 12132276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #77
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 170 - 256
Target Start/End: Original strand, 23719386 - 23719472
Alignment:
Q  170 cagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccat 256  Q
    |||||| ||||||  ||||||||| ||| ||||||||||||| | ||  ||||||||||| ||||||||| ||||||||||||||||    
T  23719386 cagagcggtcatgacatcattggctttagccaattcttcccttagagtggctaactcggtgcggagctgagcattctcttcttccat 23719472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #78
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 28 - 170
Target Start/End: Complemental strand, 30168732 - 30168590
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttg 127  Q
    ||||||| ||||||||||| ||||| || |||| |||||||||||| || || ||| |||| || || || || |||||||||||| | |  ||||||||    
T  30168732 ggacattattctcaaaagtgagcttcccttgatcaatgagcttcttcacgatatacttcaaagcataacacccctcgacatcatgacctaaggcaccttg 30168633  T
Q  128 atggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    ||| ||||| || ||||| ||||| | |||||| |||||||||    
T  30168632 atgaaaatcgcatttgagatcagacctgaaccttggaggcaac 30168590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #79
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 167 - 284
Target Start/End: Original strand, 28961181 - 28961298
Alignment:
Q  167 caacagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttc 266  Q
    ||||||||||||||| | |||||  || ||  ||||||| ||||| | ||| || || |||||||| |||||    || |||||||||||||||||||||    
T  28961181 caacagagcagtcatagcatcatgagctttggccaattcctcccttagagatgccaattcggtacgaagctgtgtgttttcttcttccatagcccttttc 28961280  T
Q  267 tttcttctgtattctctg 284  Q
    ||||||||||||||||||    
T  28961281 tttcttctgtattctctg 28961298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #80
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 243 - 284
Target Start/End: Original strand, 37360113 - 37360154
Alignment:
Q  243 ttctcttcttccatagcccttttctttcttctgtattctctg 284  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  37360113 ttctcttcttccatagcccttttctttcttctgtattctctg 37360154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #81
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 30 - 170
Target Start/End: Complemental strand, 2511312 - 2511172
Alignment:
Q  30 acattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttgat 129  Q
    ||||| ||||||||||| ||||| || ||||  ||||||||||| || || ||| |||| || || || || |||||||||||| | || ||||||||||    
T  2511312 acattattctcaaaagtcagcttcccttgatcgatgagcttcttcacgatatacttcaaagcataacacccctcgacatcatgacctagggcaccttgat 2511213  T
Q  130 ggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    | || ||||| ||||| ||||| | |||||| |||||||||    
T  2511212 gaaagtcacatttgagatcagacctgaaccttggaggcaac 2511172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #82
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 30 - 170
Target Start/End: Original strand, 8665376 - 8665516
Alignment:
Q  30 acattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttgat 129  Q
    ||||| ||||||||||| ||||| || ||||  ||||||||||| || || ||| |||| || || || || |||||||||||| | || ||||||||||    
T  8665376 acattattctcaaaagtcagcttcccttgatcgatgagcttcttcacgatatacttcaaagcataacacccctcgacatcatgacctagggcaccttgat 8665475  T
Q  130 ggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    | || ||||| ||||| ||||| | |||||| |||||||||    
T  8665476 gaaagtcacatttgagatcagacctgaaccttggaggcaac 8665516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #83
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 30 - 170
Target Start/End: Original strand, 15758758 - 15758898
Alignment:
Q  30 acattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttgat 129  Q
    ||||| ||||||||||| ||||| || ||||  ||||||||||| || || ||| |||| || || || || |||||||||||| | || ||||||||||    
T  15758758 acattattctcaaaagtcagcttcccttgatcgatgagcttcttcacgatatacttcaaagcataacacccctcgacatcatgacctagggcaccttgat 15758857  T
Q  130 ggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    | || ||||| ||||| ||||| | |||||| |||||||||    
T  15758858 gaaagtcacatttgagatcagacctgaaccttggaggcaac 15758898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #84
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 185 - 256
Target Start/End: Complemental strand, 30933380 - 30933309
Alignment:
Q  185 atcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccat 256  Q
    |||||| |||||| ||||||||||||| | ||  ||||||||||||||||||||| |||| |||||||||||    
T  30933380 atcattagccttagccaattcttcccttagagtggctaactcggtacggagctgagcattttcttcttccat 30933309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #85
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 28 - 170
Target Start/End: Original strand, 29966965 - 29967107
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttg 127  Q
    ||||||| ||||||||||| ||||| || ||||  ||||||||||| || || ||| |||| || || || || ||||| |||||| |||  ||||||||    
T  29966965 ggacattattctcaaaagtcagcttcccttgatcgatgagcttcttcacgatatacttcaaagcataacacccctcgacgtcatgacccaaggcaccttg 29967064  T
Q  128 atggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    ||| || ||||| ||||| ||||| | |||||| |||||||||    
T  29967065 atgaaagtcacatttgagatcagacctgaaccttggaggcaac 29967107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #86
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 28 - 170
Target Start/End: Complemental strand, 30029678 - 30029536
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttg 127  Q
    ||||||| ||||||||||| ||||| || ||||  ||||||||||| || || ||| |||| || || || || ||||| |||||| |||  ||||||||    
T  30029678 ggacattattctcaaaagtcagcttcccttgatcgatgagcttcttcacgatatacttcaaagcataacacccctcgacgtcatgacccaaggcaccttg 30029579  T
Q  128 atggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    ||| || ||||| ||||| ||||| | |||||| |||||||||    
T  30029578 atgaaagtcacatttgagatcagacctgaaccttggaggcaac 30029536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #87
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 28 - 170
Target Start/End: Complemental strand, 30152281 - 30152139
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttg 127  Q
    ||||||| ||||||||||| ||||| || ||||  ||||||||||| || || ||| |||| || || || || |||||||||||| | || ||||||||    
T  30152281 ggacattattctcaaaagtcagcttcccttgatcgatgagcttcttcacgatatacttcaaagcataacacccctcgacatcatgacctagggcaccttg 30152182  T
Q  128 atggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    ||| || || || ||||| ||||| | |||||| |||||||||    
T  30152181 atgaaagtcgcatttgagatcagacctgaaccttggaggcaac 30152139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #88
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 243 - 284
Target Start/End: Complemental strand, 28647930 - 28647889
Alignment:
Q  243 ttctcttcttccatagcccttttctttcttctgtattctctg 284  Q
    |||||||||||||||||||| |||||||||||||||||||||    
T  28647930 ttctcttcttccatagccctcttctttcttctgtattctctg 28647889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #89
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 167 - 284
Target Start/End: Original strand, 32600851 - 32600968
Alignment:
Q  167 caacagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttc 266  Q
    ||||||||||||||| | |||||  || ||  ||||||| ||||| ||||| || || || ||||| |||||    |||||||||||||||||| |||||    
T  32600851 caacagagcagtcatagcatcatgagctttggccaattcctcccttaaagatgccaattcagtacgaagctgcgtgttctcttcttccatagcctttttc 32600950  T
Q  267 tttcttctgtattctctg 284  Q
    |||||||| |||||||||    
T  32600951 tttcttctatattctctg 32600968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #90
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 30 - 170
Target Start/End: Complemental strand, 3789802 - 3789662
Alignment:
Q  30 acattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttgat 129  Q
    ||||| ||||||||||| ||||| || |||| |||||| ||||| || || ||| |||| || || || || |||||||||||| | |  ||||||||||    
T  3789802 acattattctcaaaagtcagcttcccttgatcaatgagtttcttcacgatatacttcaaagcataacacccctcgacatcatgacctaaggcaccttgat 3789703  T
Q  130 ggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    | || ||||| ||||| ||||| | |||||| |||||||||    
T  3789702 gaaagtcacatttgagatcagacctgaaccttggaggcaac 3789662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #91
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 30 - 170
Target Start/End: Original strand, 28959687 - 28959827
Alignment:
Q  30 acattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttgat 129  Q
    ||||| ||||||||||| ||||| || |||| |||||| ||||| || || ||| |||| || || || || |||||||||||| | |  ||||||||||    
T  28959687 acattattctcaaaagtcagcttcccttgatcaatgagtttcttcacgatatacttcaaagcataacacccctcgacatcatgacctaaggcaccttgat 28959786  T
Q  130 ggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    | || ||||| ||||| ||||| | |||||| |||||||||    
T  28959787 gaaagtcacatttgagatcagacctgaaccttggaggcaac 28959827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #92
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 30 - 170
Target Start/End: Complemental strand, 34616779 - 34616639
Alignment:
Q  30 acattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttgat 129  Q
    ||||| ||||||||||| ||||| || |||| |||||| ||||| || || ||| |||| || || || || |||||||||||| | |  ||||||||||    
T  34616779 acattattctcaaaagtcagcttcccttgatcaatgagtttcttcacgatatacttcaaagcataacacccctcgacatcatgacctaaggcaccttgat 34616680  T
Q  130 ggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    | || ||||| ||||| ||||| | |||||| |||||||||    
T  34616679 gaaagtcacatttgagatcagacctgaaccttggaggcaac 34616639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #93
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 28 - 170
Target Start/End: Original strand, 18375311 - 18375453
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttg 127  Q
    ||||||| ||||||||||| ||||| || ||||  ||||||||||| || || ||| |||| || || || || ||||| |||||| | |  ||||||||    
T  18375311 ggacattattctcaaaagtcagcttcccttgatcgatgagcttcttcacgatatacttcaaagcataacacccctcgacgtcatgacctaaggcaccttg 18375410  T
Q  128 atggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    ||| || ||||| ||||| ||||| | |||||| |||||||||    
T  18375411 atgaaagtcacatttgagatcagacctgaaccttggaggcaac 18375453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #94
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 28 - 170
Target Start/End: Complemental strand, 26480655 - 26480513
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttg 127  Q
    ||||||| ||||||||||| ||||| || ||||  ||||||||||| || || ||| |||| || || || || ||||| |||||| | |  ||||||||    
T  26480655 ggacattattctcaaaagtcagcttcccttgatcgatgagcttcttcacgatatacttcaaagcataacacccctcgacgtcatgacctaaggcaccttg 26480556  T
Q  128 atggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    ||| || ||||| ||||| ||||| | |||||| |||||||||    
T  26480555 atgaaagtcacatttgagatcagacctgaaccttggaggcaac 26480513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #95
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 36 - 170
Target Start/End: Original strand, 37358550 - 37358684
Alignment:
Q  36 ttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttgatggaaat 135  Q
    ||||||||||| ||||| || |||| |||||| ||||| ||||| ||| |||| || || || || |||||||||||  | |  ||||||||||| || |    
T  37358550 ttctcaaaagtcagcttcccttgatcaatgagtttcttcacaatatacttcaaagcataacacccctcgacatcatgtcctaaggcaccttgatgaaagt 37358649  T
Q  136 cacacttgaggtcagaacggaacctgggaggcaac 170  Q
    |||| ||||| ||||| | |||||| |||||||||    
T  37358650 cacatttgagatcagacctgaaccttggaggcaac 37358684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #96
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 170
Target Start/End: Complemental strand, 6874566 - 6874426
Alignment:
Q  30 acattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttgat 129  Q
    ||||| ||||||||||| ||||| || ||||  || |||||||| || || ||| |||| || || || || ||||| |||||| | |  ||||||||||    
T  6874566 acattattctcaaaagtcagcttcccttgatcgataagcttcttcacgatatacttcaaagcataacacccctcgacgtcatgacctaaggcaccttgat 6874467  T
Q  130 ggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    | |||||||| ||||| ||||| | |||||| |||||||||    
T  6874466 gaaaatcacatttgagatcagacctgaaccttggaggcaac 6874426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #97
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 166
Target Start/End: Complemental strand, 33292786 - 33292650
Alignment:
Q  30 acattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttgat 129  Q
    ||||||||||||||||||| ||| || ||||  || |||||||| || |||||| | |  || ||||| || || ||||||||  | | ||| |||||||    
T  33292786 acattgttctcaaaagttaacttcccttgatctataagcttcttgacgatgtactttagagcatagcacccctcaacatcatgccctaaagcgccttgat 33292687  T
Q  130 ggaaatcacacttgaggtcagaacggaacctgggagg 166  Q
    |||| |||||||| || ||||| |||||||| |||||    
T  33292686 ggaagtcacacttaagatcagagcggaaccttggagg 33292650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #98
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 170
Target Start/End: Complemental strand, 41674970 - 41674830
Alignment:
Q  30 acattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttgat 129  Q
    ||||| ||||||||||| ||||| || ||||  || |||||||| || |||||| | |  || ||||| || || ||||||||  | || ||||||||||    
T  41674970 acattattctcaaaagtcagcttcccttgatctataagcttcttgacgatgtactttagagcatagcacccctcaacatcatggcctagggcaccttgat 41674871  T
Q  130 ggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    | |||||||| ||||| ||||| | |||||| |||||||||    
T  41674870 gaaaatcacatttgagatcagatctgaaccttggaggcaac 41674830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #99
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 28 - 170
Target Start/End: Complemental strand, 5638173 - 5638031
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttg 127  Q
    ||||||| || |||||||| ||||| || ||||  ||||||||||| || || ||| |||| || || || || ||||| |||||| | |  ||||||||    
T  5638173 ggacattattttcaaaagtcagcttcccttgatcgatgagcttcttcacgatatacttcaaagcataacacccctcgacgtcatgacctaaggcaccttg 5638074  T
Q  128 atggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    ||| || ||||| ||||| ||||| | |||||| |||||||||    
T  5638073 atgaaagtcacatttgagatcagacctgaaccttggaggcaac 5638031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #100
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 174 - 256
Target Start/End: Complemental strand, 11548109 - 11548027
Alignment:
Q  174 gcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccat 256  Q
    |||||||||  |||||| || ||  ||||||||||||| | ||  ||||| ||||||||||||||| | ||||||||||||||    
T  11548109 gcagtcatgacatcattagctttggccaattcttcccttagagtggctaattcggtacggagctgagcgttctcttcttccat 11548027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 115; Significance: 2e-58; HSPs: 83)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 28 - 170
Target Start/End: Original strand, 21703155 - 21703297
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttg 127  Q
    ||||||||||||||||||||| ||||||||||| |||||||||||| ||||||||| |||| ||||||||||||| |||||||||| |||||||||||||    
T  21703155 ggacattgttctcaaaagttaactttccctgatcaatgagcttcttcacaatgtacttcaaagcgtagcatcctttgacatcatgacccagagcaccttg 21703254  T
Q  128 atggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  21703255 atggaaatcacacttgaggtcagaacggaacctgggaggcaac 21703297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 28 - 170
Target Start/End: Complemental strand, 27393219 - 27393077
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttg 127  Q
    ||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| |||| ||||| |||||||| ||||||||  |||||||||||||    
T  27393219 ggacattgttctcaaaagttaactttccctgatcaatgagcttctttacaatgtacttcaaagcgtaacatccttcaacatcatggcccagagcaccttg 27393120  T
Q  128 atggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    ||||||||| ||||||||||||||| |||||||||||||||||    
T  27393119 atggaaatcgcacttgaggtcagaatggaacctgggaggcaac 27393077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 63 - 167
Target Start/End: Complemental strand, 27118903 - 27118799
Alignment:
Q  63 atgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttgatggaaatcacacttgaggtcagaacggaacctgg 162  Q
    ||||| || |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| |||    
T  27118903 atgagtttttttacaatgtacctcaacgcgtagcatccttcgacatcatgacccagagcaccttgatggaaatcacacttgaggtccgaacggaacttgg 27118804  T
Q  163 gaggc 167  Q
    |||||    
T  27118803 gaggc 27118799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 63 - 170
Target Start/End: Original strand, 19456447 - 19456554
Alignment:
Q  63 atgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttgatggaaatcacacttgaggtcagaacggaacctgg 162  Q
    |||||||| |||||||||||| |||| ||||||||| |||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  19456447 atgagcttttttacaatgtacttcaaagcgtagcattcttcaacatcatgacccagagcaccttgatggaaatcacacttgaggtcagaacggaacctgg 19456546  T
Q  163 gaggcaac 170  Q
    ||||||||    
T  19456547 gaggcaac 19456554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 63 - 167
Target Start/End: Complemental strand, 3784869 - 3784765
Alignment:
Q  63 atgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttgatggaaatcacacttgaggtcagaacggaacctgg 162  Q
    ||||| || |||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| ||||||||| |||    
T  3784869 atgagtttttttacaatgtacctcaacgcgtagcatccttcgacatcatgacccatagcaccttgatggaaatcacacttgaggtccgaacggaacttgg 3784770  T
Q  163 gaggc 167  Q
    |||||    
T  3784769 gaggc 3784765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 63 - 167
Target Start/End: Original strand, 34303329 - 34303433
Alignment:
Q  63 atgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttgatggaaatcacacttgaggtcagaacggaacctgg 162  Q
    ||||| || |||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| ||||||||| |||    
T  34303329 atgagtttttttacaatgtacctcaacgcgtagcatccttcgacatcatgacccatagcaccttgatggaaatcacacttgaggtccgaacggaacttgg 34303428  T
Q  163 gaggc 167  Q
    |||||    
T  34303429 gaggc 34303433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 72 - 167
Target Start/End: Complemental strand, 34157217 - 34157122
Alignment:
Q  72 tttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttgatggaaatcacacttgaggtcagaacggaacctgggaggc 167  Q
    |||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| ||||||||| ||||||||    
T  34157217 tttacaatgtacctcaacgcgtagcatccttcgacatcatgacccatagcaccttgatggaaatcacacttgaggtccgaacggaacttgggaggc 34157122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 63 - 167
Target Start/End: Complemental strand, 16163814 - 16163710
Alignment:
Q  63 atgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttgatggaaatcacacttgaggtcagaacggaacctgg 162  Q
    ||||| || ||||||||||||||||||||||||||||||||| |||||||| ||| |||||||||||||||||||||||||||||| ||||||||| |||    
T  16163814 atgagtttttttacaatgtacctcaacgcgtagcatccttcgccatcatgacccatagcaccttgatggaaatcacacttgaggtccgaacggaacttgg 16163715  T
Q  163 gaggc 167  Q
    |||||    
T  16163714 gaggc 16163710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 30 - 170
Target Start/End: Complemental strand, 40233759 - 40233619
Alignment:
Q  30 acattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttgat 129  Q
    ||||| ||||||||||| ||||| || |||| |||||||||||| || || ||| |||| || || |||||||||||||||||| |||||||||||||||    
T  40233759 acattattctcaaaagtcagcttcccttgatcaatgagcttcttcacgatatacttcaaagcataacatccttcgacatcatgacccagagcaccttgat 40233660  T
Q  130 ggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    |||||||||| ||||||||||| |||||||| |||||||||    
T  40233659 ggaaatcacatttgaggtcagaccggaaccttggaggcaac 40233619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 170 - 259
Target Start/End: Original strand, 21704656 - 21704745
Alignment:
Q  170 cagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagc 259  Q
    |||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| |||| ||||||||||||||    
T  21704656 cagagcagtcatggtatcattggccttagccaattcttccctcagagaagctaactcggtacggagctgagcattttcttcttccatagc 21704745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 170 - 256
Target Start/End: Complemental strand, 27391758 - 27391672
Alignment:
Q  170 cagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccat 256  Q
    ||||||||||||||| |||||||||||| ||||||||||||||| ||||||||||||||||||||||||| |||| |||||||||||    
T  27391758 cagagcagtcatggtgtcattggccttagccaattcttccctcagagaagctaactcggtacggagctgagcattttcttcttccat 27391672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 28 - 173
Target Start/End: Complemental strand, 20838168 - 20838023
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttg 127  Q
    ||||||| ||||||||||| |||||||| |||| |||||||||||| || || ||| |||| || ||||| || |||||||||||| |||| || |||||    
T  20838168 ggacattattctcaaaagtcagctttccttgatcaatgagcttcttcacgatatacttcaaagcatagcacccctcgacatcatgacccagggcgccttg 20838069  T
Q  128 atggaaatcacacttgaggtcagaacggaacctgggaggcaacaga 173  Q
    |||||||||||| || ||||| || | |||||||||||||||||||    
T  20838068 atggaaatcacatttaaggtcggacctgaacctgggaggcaacaga 20838023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 170 - 259
Target Start/End: Original strand, 34304102 - 34304191
Alignment:
Q  170 cagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagc 259  Q
    |||||||||||||||||||||||||||| ||||||||||||||| ||||||||| ||||||||||||||| |||| || |||||||||||    
T  34304102 cagagcagtcatggtatcattggccttagccaattcttccctcagagaagctaattcggtacggagctgagcattttcctcttccatagc 34304191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 167 - 259
Target Start/End: Original strand, 19457892 - 19457984
Alignment:
Q  167 caacagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagc 259  Q
    |||||||||||||||||| || |||| |||| ||||||||||||||| ||||||||||||||||||||||||| |||| ||||||||||||||    
T  19457892 caacagagcagtcatggtgtcgttggtcttagccaattcttccctcagagaagctaactcggtacggagctgagcattttcttcttccatagc 19457984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 170 - 256
Target Start/End: Complemental strand, 27118130 - 27118044
Alignment:
Q  170 cagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccat 256  Q
    |||||||||||||||||||||||||||| ||||||||||||||| ||||||||| ||||||||||||||| |||| || ||||||||    
T  27118130 cagagcagtcatggtatcattggccttagccaattcttccctcagagaagctaattcggtacggagctgagcattttcctcttccat 27118044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 28 - 170
Target Start/End: Original strand, 27434435 - 27434577
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttg 127  Q
    ||||||| ||||||||||| |||||||| |||| |||||||||||| || || ||| |||| || ||||| || |||||||||||| |||| || |||||    
T  27434435 ggacattattctcaaaagtcagctttccttgatcaatgagcttcttcacgatatacttcaaagcatagcacccctcgacatcatgacccagggcgccttg 27434534  T
Q  128 atggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    |||||||||||| |||||||| || | |||| |||||||||||    
T  27434535 atggaaatcacatttgaggtcggacctgaacttgggaggcaac 27434577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 170 - 284
Target Start/End: Original strand, 31892145 - 31892259
Alignment:
Q  170 cagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttcttt 269  Q
    |||||||||||||  |||||| || ||| ||||||||||||| | ||  ||||||||||||||||||||| | |||||||||||||||||| ||||| ||    
T  31892145 cagagcagtcatgacatcattagctttagccaattcttcccttagagtggctaactcggtacggagctgagcgttctcttcttccatagcctttttcctt 31892244  T
Q  270 cttctgtattctctg 284  Q
    |||||||||||||||    
T  31892245 cttctgtattctctg 31892259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 170 - 259
Target Start/End: Original strand, 27435938 - 27436027
Alignment:
Q  170 cagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagc 259  Q
    |||||||||||||||||||||||||||| ||||||||||||| | || |||||||||||||||||||||| | || ||||||||||||||    
T  27435938 cagagcagtcatggtatcattggccttagccaattcttccctgagagtagctaactcggtacggagctgagcgttttcttcttccatagc 27436027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 28 - 170
Target Start/End: Complemental strand, 12655792 - 12655650
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttg 127  Q
    ||||||| ||||||||||| |||||||| |||| |||||||||||| || || ||| |||| |||||||| || |||||||||||| |||| || |||||    
T  12655792 ggacattattctcaaaagtcagctttccttgatcaatgagcttcttcacgatatacttcaaagcgtagcacccctcgacatcatgacccagggcgccttg 12655693  T
Q  128 atggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    ||| |||||||| ||||| || || | |||||| |||||||||    
T  12655692 atgaaaatcacatttgagatcggacctgaaccttggaggcaac 12655650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 28 - 170
Target Start/End: Original strand, 23128557 - 23128699
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttg 127  Q
    ||||||| ||||||||||| |||||||| |||| |||||||||||| || || ||| |||| || ||||| || |||||||||||| |||| ||||||||    
T  23128557 ggacattattctcaaaagtcagctttccttgatcaatgagcttcttcacgatatacttcaaagcatagcacccctcgacatcatgacccagggcaccttg 23128656  T
Q  128 atggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    ||| |||||||| ||||| || || | |||||| |||||||||    
T  23128657 atgaaaatcacatttgagatcggacctgaaccttggaggcaac 23128699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 28 - 170
Target Start/End: Complemental strand, 28882464 - 28882322
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttg 127  Q
    ||||||| ||||||||||| |||||||| |||| |||||||||||| || || ||| |||| || ||||| || |||||||||||| |||| || |||||    
T  28882464 ggacattattctcaaaagtcagctttccttgatcaatgagcttcttcacgatatacttcaaagcatagcacccctcgacatcatgacccagggcgccttg 28882365  T
Q  128 atggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    ||| |||||||| ||||| || || | ||||||||||||||||    
T  28882364 atgaaaatcacatttgagatcggacctgaacctgggaggcaac 28882322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 170 - 284
Target Start/End: Complemental strand, 34156435 - 34156321
Alignment:
Q  170 cagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttcttt 269  Q
    |||||||||||||  |||||| || ||| ||||||| ||||| | ||  ||||||||||||||||||||| | |||||||||||||||||| ||||| ||    
T  34156435 cagagcagtcatgacatcattagctttagccaattcctcccttagagtggctaactcggtacggagctgagcgttctcttcttccatagcctttttcctt 34156336  T
Q  270 cttctgtattctctg 284  Q
    |||||||||||||||    
T  34156335 cttctgtattctctg 34156321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 28 - 173
Target Start/End: Original strand, 260744 - 260889
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttg 127  Q
    ||||||| ||||||||||| ||||||||||||| |||||||||||| || || ||| |||| || || || || |||||||||||| | |  ||||||||    
T  260744 ggacattattctcaaaagtcagctttccctgatcaatgagcttcttcacgatatacttcaaagcataacacccctcgacatcatgacctaaggcaccttg 260843  T
Q  128 atggaaatcacacttgaggtcagaacggaacctgggaggcaacaga 173  Q
    ||| |||||||| ||||| ||||| | |||||| ||||||||||||    
T  260844 atgaaaatcacatttgagatcagacctgaaccttggaggcaacaga 260889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 170 - 284
Target Start/End: Complemental strand, 3784078 - 3783964
Alignment:
Q  170 cagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttcttt 269  Q
    |||||||||||||  |||||| || ||| ||||||| ||||| | ||  ||||||||||||||||||||| | |||||||||||||||||| ||||| ||    
T  3784078 cagagcagtcatgacatcattagctttagccaattcctcccttagagtggctaactcggtacggagctgagcgttctcttcttccatagcctttttcctt 3783979  T
Q  270 cttctgtattctctg 284  Q
    |||||||| ||||||    
T  3783978 cttctgtactctctg 3783964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 170 - 284
Target Start/End: Original strand, 12718100 - 12718214
Alignment:
Q  170 cagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttcttt 269  Q
    |||||||||||||   ||||| || ||| ||||||||||||| | ||  ||||| ||||| || |||||| | |||||||||||||||||||||||||||    
T  12718100 cagagcagtcatgacgtcattagctttagccaattcttcccttagagtggctaattcggtgcgaagctgagcgttctcttcttccatagcccttttcttt 12718199  T
Q  270 cttctgtattctctg 284  Q
    |||||||||||||||    
T  12718200 cttctgtattctctg 12718214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 170 - 284
Target Start/End: Complemental strand, 16163023 - 16162909
Alignment:
Q  170 cagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttcttt 269  Q
    |||||||||||||  |||||| || ||| ||||||| ||||| | ||  ||||||||||||||||||||| | |||||||||||||||||| ||||| ||    
T  16163023 cagagcagtcatgacatcattagctttagccaattcctcccttagagtggctaactcggtacggagctgagcgttctcttcttccatagcctttttcctt 16162924  T
Q  270 cttctgtattctctg 284  Q
    |||||||| ||||||    
T  16162923 cttctgtactctctg 16162909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 28 - 170
Target Start/End: Complemental strand, 37375411 - 37375269
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttg 127  Q
    ||||||| ||||||||||| ||||||||||||| || ||||||||| || || ||| |||| || || || || |||||||||||| | || ||||||||    
T  37375411 ggacattattctcaaaagtcagctttccctgatcaacgagcttcttcacgatatacttcaaagcataacacccctcgacatcatgacctagggcaccttg 37375312  T
Q  128 atggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    ||| |||||||| ||||| ||||| | |||||| |||||||||    
T  37375311 atgaaaatcacatttgagatcagacctgaaccttggaggcaac 37375269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 171 - 284
Target Start/End: Original strand, 11636684 - 11636797
Alignment:
Q  171 agagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttctttc 270  Q
    ||||||||||||   ||||| || ||| ||||||| ||| | | ||| ||||||||||| || |||||| | ||||||||||||||||||||||||||||    
T  11636684 agagcagtcatgacgtcattagctttagccaattcctcctttagagaggctaactcggtgcgaagctgagcgttctcttcttccatagcccttttctttc 11636783  T
Q  271 ttctgtattctctg 284  Q
    ||||||||||||||    
T  11636784 ttctgtattctctg 11636797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 171 - 284
Target Start/End: Original strand, 11642873 - 11642986
Alignment:
Q  171 agagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttctttc 270  Q
    ||||||||||||   ||||| || ||| ||||||| ||| | | ||| ||||||||||| || |||||| | ||||||||||||||||||||||||||||    
T  11642873 agagcagtcatgacgtcattagctttagccaattcctcctttagagaggctaactcggtgcgaagctgagcgttctcttcttccatagcccttttctttc 11642972  T
Q  271 ttctgtattctctg 284  Q
    ||||||||||||||    
T  11642973 ttctgtattctctg 11642986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 171 - 284
Target Start/End: Original strand, 21678678 - 21678791
Alignment:
Q  171 agagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttctttc 270  Q
    ||||||||||||   ||||| || ||| ||||||| ||| | | ||| ||||||||||| || |||||| | ||||||||||||||||||||||||||||    
T  21678678 agagcagtcatgacgtcattagctttagccaattcctcctttagagaggctaactcggtgcgaagctgagcgttctcttcttccatagcccttttctttc 21678777  T
Q  271 ttctgtattctctg 284  Q
    ||||||||||||||    
T  21678778 ttctgtattctctg 21678791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 171 - 284
Target Start/End: Original strand, 22927524 - 22927637
Alignment:
Q  171 agagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttctttc 270  Q
    ||||||||||||   ||||| || ||| ||||||| ||| | | ||| ||||||||||| || |||||| | ||||||||||||||||||||||||||||    
T  22927524 agagcagtcatgacgtcattagctttagccaattcctcctttagagaggctaactcggtgcgaagctgagcgttctcttcttccatagcccttttctttc 22927623  T
Q  271 ttctgtattctctg 284  Q
    ||||||||||||||    
T  22927624 ttctgtattctctg 22927637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 171 - 284
Target Start/End: Complemental strand, 31875026 - 31874913
Alignment:
Q  171 agagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttctttc 270  Q
    ||||||||||||   ||||| || ||| ||||||| ||| | | ||| ||||||||||| || |||||| | ||||||||||||||||||||||||||||    
T  31875026 agagcagtcatgacgtcattagctttagccaattcctcctttagagaggctaactcggtgcgaagctgagcgttctcttcttccatagcccttttctttc 31874927  T
Q  271 ttctgtattctctg 284  Q
    ||||||||||||||    
T  31874926 ttctgtattctctg 31874913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 29 - 170
Target Start/End: Complemental strand, 34279698 - 34279557
Alignment:
Q  29 gacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttga 128  Q
    |||||| ||||||||||| |||||||| |||| |||||||||||| || || ||| |||| || || || || |||||||||||| | || |||||||||    
T  34279698 gacattattctcaaaagtcagctttccttgatcaatgagcttcttcacgatatacttcaaagcataacacccctcgacatcatgacctagggcaccttga 34279599  T
Q  129 tggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    || |||||||| ||||| ||||| | |||||| |||||||||    
T  34279598 tgaaaatcacatttgagatcagacctgaaccttggaggcaac 34279557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 171 - 284
Target Start/End: Complemental strand, 34860425 - 34860312
Alignment:
Q  171 agagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttctttc 270  Q
    ||||||||||||   ||||| || ||| ||||||| ||| | | ||| ||||||||||| || |||||| | ||||||||||||||||||||||||||||    
T  34860425 agagcagtcatgacgtcattagctttagccaattcctcctttagagaggctaactcggtgcgaagctgagcgttctcttcttccatagcccttttctttc 34860326  T
Q  271 ttctgtattctctg 284  Q
    ||||||||||||||    
T  34860325 ttctgtattctctg 34860312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 171 - 284
Target Start/End: Original strand, 37687405 - 37687518
Alignment:
Q  171 agagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttctttc 270  Q
    ||||||||||||   ||||| || ||| ||||||| ||| | | ||| ||||||||||| || |||||| | ||||||||||||||||||||||||||||    
T  37687405 agagcagtcatgacgtcattagctttagccaattcctcctttagagaggctaactcggtgcgaagctgagcgttctcttcttccatagcccttttctttc 37687504  T
Q  271 ttctgtattctctg 284  Q
    ||||||||||||||    
T  37687505 ttctgtattctctg 37687518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 171 - 284
Target Start/End: Original strand, 37702670 - 37702783
Alignment:
Q  171 agagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttctttc 270  Q
    ||||||||||||   ||||| || ||| ||||||| ||| | | ||| ||||||||||| || |||||| | ||||||||||||||||||||||||||||    
T  37702670 agagcagtcatgacgtcattagctttagccaattcctcctttagagaggctaactcggtgcgaagctgagcgttctcttcttccatagcccttttctttc 37702769  T
Q  271 ttctgtattctctg 284  Q
    ||||||||||||||    
T  37702770 ttctgtattctctg 37702783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 171 - 284
Target Start/End: Complemental strand, 37924238 - 37924125
Alignment:
Q  171 agagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttctttc 270  Q
    ||||||||||||   ||||| || ||| ||||||| ||| | | ||| ||||||||||| || |||||| | ||||||||||||||||||||||||||||    
T  37924238 agagcagtcatgacgtcattagctttagccaattcctcctttagagaggctaactcggtgcgaagctgagcgttctcttcttccatagcccttttctttc 37924139  T
Q  271 ttctgtattctctg 284  Q
    ||||||||||||||    
T  37924138 ttctgtattctctg 37924125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 167 - 284
Target Start/End: Original strand, 39053303 - 39053420
Alignment:
Q  167 caacagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttc 266  Q
    ||||||||||||||| | |||||  || ||  ||||||| ||||| ||||| || || ||||||||||| ||  | ||||||||||||||||||||||||    
T  39053303 caacagagcagtcatagcatcatgagctttggccaattcctcccttaaagatgccaattcggtacggagttgcgcgttctcttcttccatagcccttttc 39053402  T
Q  267 tttcttctgtattctctg 284  Q
    ||||||||||||||||||    
T  39053403 tttcttctgtattctctg 39053420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 63 - 170
Target Start/End: Original strand, 31891354 - 31891461
Alignment:
Q  63 atgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttgatggaaatcacacttgaggtcagaacggaacctgg 162  Q
    ||||| || |||||||||||||||||||||||||| || |||||||||||| |||| || |||||||| |||||||| ||||| || || | |||||| |    
T  31891354 atgagtttttttacaatgtacctcaacgcgtagcacccctcgacatcatgacccagggcgccttgatgaaaatcacatttgagatcggacctgaaccttg 31891453  T
Q  163 gaggcaac 170  Q
    ||||||||    
T  31891454 gaggcaac 31891461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 28 - 166
Target Start/End: Complemental strand, 12587060 - 12586922
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttg 127  Q
    ||||||| ||||||||||| ||||| || |||| |||||||||||| || || ||| |||| || || |||||||||||||||||| | |  ||||||||    
T  12587060 ggacattattctcaaaagtcagcttcccttgatcaatgagcttcttcacgatatacttcaaagcataacatccttcgacatcatgacctaaggcaccttg 12586961  T
Q  128 atggaaatcacacttgaggtcagaacggaacctgggagg 166  Q
    ||| |||||||| || || ||||| |||||||| |||||    
T  12586960 atgaaaatcacatttaagatcagagcggaaccttggagg 12586922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 28 - 166
Target Start/End: Complemental strand, 27777472 - 27777334
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttg 127  Q
    ||||||| ||||||||||| ||||||||||||| |||||||||||| || || ||| |||| || || || || |||||||||||| | |  ||||||||    
T  27777472 ggacattattctcaaaagtcagctttccctgatcaatgagcttcttcacgatatacttcaaagcataacacccctcgacatcatgacctaaggcaccttg 27777373  T
Q  128 atggaaatcacacttgaggtcagaacggaacctgggagg 166  Q
    ||| |||||||| || || ||||| |||||||| |||||    
T  27777372 atgaaaatcacatttaagatcagagcggaaccttggagg 27777334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 28 - 166
Target Start/End: Complemental strand, 27817230 - 27817092
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttg 127  Q
    ||||||| ||||||||||| ||||||||||||| |||||||||||| || || ||| |||| || || || || |||||||||||| | |  ||||||||    
T  27817230 ggacattattctcaaaagtcagctttccctgatcaatgagcttcttcacgatatacttcaaagcataacacccctcgacatcatgacctaaggcaccttg 27817131  T
Q  128 atggaaatcacacttgaggtcagaacggaacctgggagg 166  Q
    ||| |||||||| || || ||||| |||||||| |||||    
T  27817130 atgaaaatcacatttaagatcagagcggaaccttggagg 27817092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 171 - 284
Target Start/End: Original strand, 16830834 - 16830947
Alignment:
Q  171 agagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttctttc 270  Q
    ||||||||||||   ||||| || ||| ||||||| ||| | | ||| |||| |||||| || |||||| | ||||||||||||||||||||||||||||    
T  16830834 agagcagtcatgacgtcattagctttagccaattcctcctttagagaggctacctcggtgcgaagctgagcgttctcttcttccatagcccttttctttc 16830933  T
Q  271 ttctgtattctctg 284  Q
    ||||||||||||||    
T  16830934 ttctgtattctctg 16830947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 171 - 284
Target Start/End: Complemental strand, 16890647 - 16890534
Alignment:
Q  171 agagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttctttc 270  Q
    ||||||||||||   ||||| || ||| ||||||| ||| | | ||| |||| |||||| || |||||| | ||||||||||||||||||||||||||||    
T  16890647 agagcagtcatgacgtcattagctttagccaattcctcctttagagaggctacctcggtgcgaagctgagcgttctcttcttccatagcccttttctttc 16890548  T
Q  271 ttctgtattctctg 284  Q
    ||||||||||||||    
T  16890547 ttctgtattctctg 16890534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 171 - 284
Target Start/End: Original strand, 19417995 - 19418108
Alignment:
Q  171 agagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttctttc 270  Q
    ||||||||||||   ||||| || ||| ||||||| ||| | | ||| |||| |||||| || |||||| | ||||||||||||||||||||||||||||    
T  19417995 agagcagtcatgacgtcattagctttagccaattcctcctttagagaggctacctcggtgcgaagctgagcgttctcttcttccatagcccttttctttc 19418094  T
Q  271 ttctgtattctctg 284  Q
    ||||||||||||||    
T  19418095 ttctgtattctctg 19418108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 171 - 284
Target Start/End: Complemental strand, 32048543 - 32048430
Alignment:
Q  171 agagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttctttc 270  Q
    ||||||||||||   ||||| || ||| ||||||| ||| | | ||| |||| |||||| || |||||| | ||||||||||||||||||||||||||||    
T  32048543 agagcagtcatgacgtcattagctttagccaattcctcctttagagaggctacctcggtgcgaagctgagcgttctcttcttccatagcccttttctttc 32048444  T
Q  271 ttctgtattctctg 284  Q
    ||||||||||||||    
T  32048443 ttctgtattctctg 32048430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 167 - 284
Target Start/End: Complemental strand, 37373928 - 37373811
Alignment:
Q  167 caacagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttc 266  Q
    ||||||||||||||| | |||||  || ||  ||||||| ||| | | ||| || || ||||| ||||||||| | ||||||||||||||||||||||||    
T  37373928 caacagagcagtcatagcatcatgagctttggccaattcctcctttagagatgccaattcggtgcggagctgagcgttctcttcttccatagcccttttc 37373829  T
Q  267 tttcttctgtattctctg 284  Q
    ||||||||||||||||||    
T  37373828 tttcttctgtattctctg 37373811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 167 - 284
Target Start/End: Complemental strand, 40232266 - 40232149
Alignment:
Q  167 caacagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttc 266  Q
    ||||||||||||||| | |||||  || ||  ||||||| ||| | ||||| || || ||||||||||| ||  | ||||||||||||||||||||||||    
T  40232266 caacagagcagtcatagcatcatgagctttggccaattcctcctttaaagatgccaattcggtacggagttgcgcgttctcttcttccatagcccttttc 40232167  T
Q  267 tttcttctgtattctctg 284  Q
    ||||||||||||||||||    
T  40232166 tttcttctgtattctctg 40232149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 30 - 166
Target Start/End: Original strand, 12716595 - 12716731
Alignment:
Q  30 acattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttgat 129  Q
    ||||| ||||||||||| ||||||||||||| |||||||||||| || || ||| |||| || || || || |||||||||||| | |  ||||||||||    
T  12716595 acattattctcaaaagtcagctttccctgatcaatgagcttcttcacgatatacttcaaagcataacacccctcgacatcatgacctaaggcaccttgat 12716694  T
Q  130 ggaaatcacacttgaggtcagaacggaacctgggagg 166  Q
    | |||||||| || || ||||| |||||||| |||||    
T  12716695 gaaaatcacatttaagatcagagcggaaccttggagg 12716731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 30 - 170
Target Start/End: Complemental strand, 32050046 - 32049906
Alignment:
Q  30 acattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttgat 129  Q
    ||||| ||||||||||| ||||||||||||| |||||||||||| || || ||| |||| || || || || |||||||||||| | || ||||||||||    
T  32050046 acattattctcaaaagtcagctttccctgatcaatgagcttcttcacgatatacttcaaagcataacacccctcgacatcatgacctagggcaccttgat 32049947  T
Q  130 ggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    | || || || ||||| ||||| | |||||| |||||||||    
T  32049946 gaaagtcgcatttgagatcagacctgaaccttggaggcaac 32049906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 28 - 166
Target Start/End: Original strand, 13936535 - 13936673
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttg 127  Q
    ||||||| ||||||||||| ||||| || |||| |||||||||||| || |||||| |||| || || || || |||||||||||| | |  ||||||||    
T  13936535 ggacattattctcaaaagtcagcttcccttgatcaatgagcttcttcacgatgtacttcaaagcataacacccctcgacatcatgacctaaggcaccttg 13936634  T
Q  128 atggaaatcacacttgaggtcagaacggaacctgggagg 166  Q
    ||| |||||||| || || ||||| |||||||| |||||    
T  13936635 atgaaaatcacatttaagatcagagcggaaccttggagg 13936673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 28 - 170
Target Start/End: Original strand, 16829329 - 16829471
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttg 127  Q
    ||||||| ||||||||||| ||||||||||||| |||||||||||| || || ||| |||| || || || || |||||||||||| | |  ||||||||    
T  16829329 ggacattattctcaaaagtcagctttccctgatcaatgagcttcttcacgatatacttcaaagcataacacccctcgacatcatgacctaaggcaccttg 16829428  T
Q  128 atggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    ||| || ||||| || || ||||| | |||||| |||||||||    
T  16829429 atgaaagtcacatttaagatcagacctgaaccttggaggcaac 16829471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 28 - 170
Target Start/End: Complemental strand, 16892152 - 16892010
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttg 127  Q
    ||||||| ||||||||||| ||||||||||||| |||||||||||| || || ||| |||| || || || || |||||||||||| | |  ||||||||    
T  16892152 ggacattattctcaaaagtcagctttccctgatcaatgagcttcttcacgatatacttcaaagcataacacccctcgacatcatgacctaaggcaccttg 16892053  T
Q  128 atggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    ||| || ||||| || || ||||| | |||||| |||||||||    
T  16892052 atgaaagtcacatttaagatcagacctgaaccttggaggcaac 16892010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 170 - 256
Target Start/End: Complemental strand, 20836664 - 20836578
Alignment:
Q  170 cagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccat 256  Q
    |||||||||||||  |||||| |||||| ||||||||||||| | ||  ||||||||||||||||||||| |||| |||||||||||    
T  20836664 cagagcagtcatgacatcattagccttagccaattcttcccttagagtggctaactcggtacggagctgagcattttcttcttccat 20836578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 28 - 166
Target Start/End: Complemental strand, 27803957 - 27803819
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttg 127  Q
    ||||||| ||||||||||| ||||||||||||| |||||||||||| || || ||| |||| || || || || |||||||||||  | |  ||||||||    
T  27803957 ggacattattctcaaaagtcagctttccctgatcaatgagcttcttcacgatatacttcaaagcataacacccctcgacatcatggcctaaggcaccttg 27803858  T
Q  128 atggaaatcacacttgaggtcagaacggaacctgggagg 166  Q
    ||| |||||||| || || ||||| |||||||| |||||    
T  27803857 atgaaaatcacatttaagatcagagcggaaccttggagg 27803819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 28 - 166
Target Start/End: Original strand, 39051813 - 39051951
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttg 127  Q
    ||||||| ||||||||||| ||||||||||||| |||||||||||| || || ||| |||| || || || || |||||||||||  | |  ||||||||    
T  39051813 ggacattattctcaaaagtcagctttccctgatcaatgagcttcttcacgatatacttcaaagcataacacccctcgacatcatggcctaaggcaccttg 39051912  T
Q  128 atggaaatcacacttgaggtcagaacggaacctgggagg 166  Q
    ||| |||||||| || || ||||| |||||||| |||||    
T  39051913 atgaaaatcacatttaagatcagagcggaaccttggagg 39051951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 167 - 284
Target Start/End: Original strand, 262237 - 262354
Alignment:
Q  167 caacagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttc 266  Q
    ||||||||||||||| | |||||  || ||  ||||||| ||||| ||||| || || || ||||| |||||    ||||||||||||||||||||||||    
T  262237 caacagagcagtcatagcatcatgagctttggccaattcctcccttaaagatgccaattcagtacgaagctgcgtgttctcttcttccatagcccttttc 262336  T
Q  267 tttcttctgtattctctg 284  Q
    ||||||||||||||||||    
T  262337 tttcttctgtattctctg 262354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 167 - 284
Target Start/End: Original strand, 9351468 - 9351585
Alignment:
Q  167 caacagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttc 266  Q
    ||||||||||||||| | |||||  || ||  ||||||| ||| | ||||| || || ||||||||||| ||  | ||||||||||||||||||||||||    
T  9351468 caacagagcagtcatagcatcatgagctttggccaattcctcctttaaagatgccaattcggtacggagttgcgcgttctcttcttccatagcccttttc 9351567  T
Q  267 tttcttctgtattctctg 284  Q
    |||||||| |||||||||    
T  9351568 tttcttctatattctctg 9351585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 167 - 284
Target Start/End: Complemental strand, 12585568 - 12585451
Alignment:
Q  167 caacagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttc 266  Q
    ||||||||||||||| | |||||  || ||  ||||||| ||||| ||||| || || || ||||| |||||    ||||||||||||||||||||||||    
T  12585568 caacagagcagtcatagcatcatgagctttggccaattcctcccttaaagatgccaattcagtacgaagctgcgtgttctcttcttccatagcccttttc 12585469  T
Q  267 tttcttctgtattctctg 284  Q
    ||||||||||||||||||    
T  12585468 tttcttctgtattctctg 12585451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 167 - 284
Target Start/End: Original strand, 13938018 - 13938135
Alignment:
Q  167 caacagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttc 266  Q
    ||||||||||||||| | |||||  || ||  ||||||| ||||| ||||| || || || |||||||| ||  | ||||||||||||||||||||||||    
T  13938018 caacagagcagtcatagcatcatgagctttggccaattcctcccttaaagatgccaattcagtacggagttgcgcgttctcttcttccatagcccttttc 13938117  T
Q  267 tttcttctgtattctctg 284  Q
    |||||||| |||||||||    
T  13938118 tttcttctatattctctg 13938135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 167 - 284
Target Start/End: Complemental strand, 27802459 - 27802342
Alignment:
Q  167 caacagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttc 266  Q
    ||||||||||||||| | |||||  || ||  ||||||| ||||| ||||| || || || ||||| |||||    ||||||||||||||||||||||||    
T  27802459 caacagagcagtcatagcatcatgagctttggccaattcctcccttaaagatgccaattcagtacgaagctgcgtgttctcttcttccatagcccttttc 27802360  T
Q  267 tttcttctgtattctctg 284  Q
    ||||||||||||||||||    
T  27802359 tttcttctgtattctctg 27802342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 30 - 170
Target Start/End: Complemental strand, 34286602 - 34286462
Alignment:
Q  30 acattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttgat 129  Q
    ||||| ||||| ||||| |||||||| |||| |||||||||||| || || ||| |||| || || || || |||||||| ||| | || ||||||||||    
T  34286602 acattattctcgaaagtcagctttccttgatcaatgagcttcttcacgatatacttcaaagcataacacccctcgacatcgtgacctagggcaccttgat 34286503  T
Q  130 ggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    | |||||||| ||||| ||||| | |||||| |||||||||    
T  34286502 gaaaatcacatttgagatcagacctgaaccttggaggcaac 34286462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 30 - 170
Target Start/End: Complemental strand, 34291662 - 34291522
Alignment:
Q  30 acattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttgat 129  Q
    ||||| ||||| ||||| |||||||| |||| |||||||||||| || || ||| |||| || || || || |||||||| ||| | || ||||||||||    
T  34291662 acattattctcgaaagtcagctttccttgatcaatgagcttcttcacgatatacttcaaagcataacacccctcgacatcgtgacctagggcaccttgat 34291563  T
Q  130 ggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    | |||||||| ||||| ||||| | |||||| |||||||||    
T  34291562 gaaaatcacatttgagatcagacctgaaccttggaggcaac 34291522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 225 - 284
Target Start/End: Complemental strand, 34278158 - 34278099
Alignment:
Q  225 tcggtacggagctgaacattctcttcttccatagcccttttctttcttctgtattctctg 284  Q
    ||||||||||||||    ||||||||||||||||||||||||||||||||||||||||||    
T  34278158 tcggtacggagctgcgtgttctcttcttccatagcccttttctttcttctgtattctctg 34278099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 28 - 166
Target Start/End: Original strand, 9349973 - 9350111
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttg 127  Q
    |||| |||||||||||||| ||||| || |||| |||||||||||| || || ||| |||| || || || || |||||||||||| | |  ||||||||    
T  9349973 ggacgttgttctcaaaagtcagcttcccttgatcaatgagcttcttcacgatatacttcaaagcataacacccctcgacatcatgacctaaggcaccttg 9350072  T
Q  128 atggaaatcacacttgaggtcagaacggaacctgggagg 166  Q
    ||| |||||||| || || ||||| |||||||| |||||    
T  9350073 atgaaaatcacatttaagatcagagcggaaccttggagg 9350111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 170 - 256
Target Start/End: Complemental strand, 12654288 - 12654202
Alignment:
Q  170 cagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccat 256  Q
    |||||||||||||  |||||| |||||| ||||| ||||||| | ||  ||||||||||||||||||||| |||| |||||||||||    
T  12654288 cagagcagtcatgacatcattagccttagccaatacttcccttagagtggctaactcggtacggagctgagcattttcttcttccat 12654202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 170 - 256
Target Start/End: Original strand, 23136888 - 23136974
Alignment:
Q  170 cagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccat 256  Q
    |||||| ||||||  |||||| || ||| ||||||||||||| | ||  ||||||||||||||||||||| ||||||||||||||||    
T  23136888 cagagcggtcatgacatcattagctttagccaattcttcccttagagtggctaactcggtacggagctgagcattctcttcttccat 23136974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 170 - 256
Target Start/End: Complemental strand, 28880960 - 28880874
Alignment:
Q  170 cagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccat 256  Q
    |||||| ||||||  |||||| || ||| ||||||||||||| | ||  ||||||||||||||||||||| ||||||||||||||||    
T  28880960 cagagcggtcatgacatcattagctttagccaattcttcccttagagtggctaactcggtacggagctgagcattctcttcttccat 28880874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 28 - 170
Target Start/End: Complemental strand, 37925743 - 37925601
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttg 127  Q
    ||||||| ||||||||||| ||||| || ||||  ||||||||||| || || ||| |||| || || || || |||||||||||| | || ||||||||    
T  37925743 ggacattattctcaaaagtcagcttcccttgatcgatgagcttcttcacgatatacttcaaagcataacacccctcgacatcatgacctagggcaccttg 37925644  T
Q  128 atggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    |||||| || || ||||| ||||| | |||||| |||||||||    
T  37925643 atggaagtcgcatttgagatcagacctgaaccttggaggcaac 37925601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 167 - 284
Target Start/End: Complemental strand, 27775974 - 27775857
Alignment:
Q  167 caacagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttc 266  Q
    ||||||||||||||| | |||||  || ||  ||||||| ||| | ||||| || || ||||||||||| ||    ||||||||||||||||||||||||    
T  27775974 caacagagcagtcatagcatcatgagctttggccaattcctcctttaaagatgccaattcggtacggagttgtgtgttctcttcttccatagcccttttc 27775875  T
Q  267 tttcttctgtattctctg 284  Q
    || |||||||||||||||    
T  27775874 ttccttctgtattctctg 27775857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 167 - 284
Target Start/End: Complemental strand, 27815741 - 27815624
Alignment:
Q  167 caacagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttc 266  Q
    ||||||||||||||| | |||||  || ||  ||||||| ||| | ||||| || || ||||||||||| ||    ||||||||||||||||||||||||    
T  27815741 caacagagcagtcatagcatcatgagctttggccaattcctcctttaaagatgccaattcggtacggagttgtgtgttctcttcttccatagcccttttc 27815642  T
Q  267 tttcttctgtattctctg 284  Q
    || |||||||||||||||    
T  27815641 ttccttctgtattctctg 27815624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 167 - 284
Target Start/End: Complemental strand, 39888829 - 39888712
Alignment:
Q  167 caacagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttc 266  Q
    ||||||||||||||| | |||||  || ||  ||||||| ||||| ||||| || || || ||||| |||||    |||||||| |||||||||||||||    
T  39888829 caacagagcagtcatagcatcatgagctttggccaattcctcccttaaagatgccaattcagtacgaagctgtgtgttctcttcctccatagcccttttc 39888730  T
Q  267 tttcttctgtattctctg 284  Q
    ||||||||||||||||||    
T  39888729 tttcttctgtattctctg 39888712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 30 - 170
Target Start/End: Original strand, 21677175 - 21677315
Alignment:
Q  30 acattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttgat 129  Q
    ||||| ||||||||||| ||||| || ||||  ||||||||||| || || ||| |||| || || || || |||||||||||| | || ||||||||||    
T  21677175 acattattctcaaaagtcagcttcccttgatcgatgagcttcttcacgatatacttcaaagcataacacccctcgacatcatgacctagggcaccttgat 21677274  T
Q  130 ggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    | || ||||| ||||| ||||| | |||||| |||||||||    
T  21677275 gaaagtcacatttgagatcagacctgaaccttggaggcaac 21677315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 225 - 284
Target Start/End: Original strand, 40191084 - 40191143
Alignment:
Q  225 tcggtacggagctgaacattctcttcttccatagcccttttctttcttctgtattctctg 284  Q
    ||||||||||||||    |||||||||||||||||| |||||||||||||||||||||||    
T  40191084 tcggtacggagctgcgtgttctcttcttccatagcctttttctttcttctgtattctctg 40191143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #75
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 28 - 170
Target Start/End: Complemental strand, 31876531 - 31876389
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttg 127  Q
    ||||||| ||||||||||| ||||| || ||||  ||||||||||| || || ||| |||| || || || || ||||| |||||| |||  ||||||||    
T  31876531 ggacattattctcaaaagtcagcttcccttgatcgatgagcttcttcacgatatacttcaaagcataacacccctcgacgtcatgacccaaggcaccttg 31876432  T
Q  128 atggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    ||| || ||||| ||||| ||||| | |||||| |||||||||    
T  31876431 atgaaagtcacatttgagatcagacctgaaccttggaggcaac 31876389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #76
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 28 - 170
Target Start/End: Complemental strand, 34861930 - 34861788
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttg 127  Q
    ||||||| ||||||||||| ||||| || ||||  ||||||||||| || || ||| |||| || || || || |||||||||||| | || ||||||||    
T  34861930 ggacattattctcaaaagtcagcttcccttgatcgatgagcttcttcacgatatacttcaaagcataacacccctcgacatcatgacctagggcaccttg 34861831  T
Q  128 atggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    ||| || || || ||||| ||||| | |||||| |||||||||    
T  34861830 atgaaagtcgcatttgagatcagacctgaaccttggaggcaac 34861788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #77
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 28 - 170
Target Start/End: Original strand, 37685900 - 37686042
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttg 127  Q
    ||||||| ||||||||||| ||||| || ||||  ||||||||||| || || ||| |||| || || || || |||||||||||| | || ||||||||    
T  37685900 ggacattattctcaaaagtcagcttcccttgatcgatgagcttcttcacgatatacttcaaagcataacacccctcgacatcatgacctagggcaccttg 37685999  T
Q  128 atggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    ||| || || || ||||| ||||| | |||||| |||||||||    
T  37686000 atgaaagtcgcatttgagatcagacctgaaccttggaggcaac 37686042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #78
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 28 - 170
Target Start/End: Original strand, 37701165 - 37701307
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttg 127  Q
    ||||||| ||||||||||| ||||| || ||||  ||||||||||| || || ||| |||| || || || || |||||||||||| | || ||||||||    
T  37701165 ggacattattctcaaaagtcagcttcccttgatcgatgagcttcttcacgatatacttcaaagcataacacccctcgacatcatgacctagggcaccttg 37701264  T
Q  128 atggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    ||| || || || ||||| ||||| | |||||| |||||||||    
T  37701265 atgaaagtcgcatttgagatcagacctgaaccttggaggcaac 37701307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #79
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 30 - 170
Target Start/End: Original strand, 22926021 - 22926161
Alignment:
Q  30 acattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttgat 129  Q
    ||||| ||||||||||| ||||| || ||||  ||||||||||| || || ||| |||| || || || || ||||| |||||| | |  ||||||||||    
T  22926021 acattattctcaaaagtcagcttcccttgatcgatgagcttcttcacgatatacttcaaagcataacacccctcgacgtcatgacctaaggcaccttgat 22926120  T
Q  130 ggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    | |||||||| ||||| ||||| | |||||| |||||||||    
T  22926121 gaaaatcacatttgagatcagacctgaaccttggaggcaac 22926161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #80
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 170
Target Start/End: Original strand, 11635179 - 11635319
Alignment:
Q  30 acattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttgat 129  Q
    ||||| ||||||||||| ||||| || |||| ||  |||||||| || |||||| |||| || || || || || ||||||||| | |  ||||| ||||    
T  11635179 acattattctcaaaagtcagcttcccttgatcaacaagcttcttcacgatgtacttcaaagcataacacccctcaacatcatgacctaaggcaccctgat 11635278  T
Q  130 ggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    | |||||||| ||||| ||||| | |||||| |||||||||    
T  11635279 gaaaatcacatttgagatcagacctgaaccttggaggcaac 11635319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #81
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 170
Target Start/End: Original strand, 11641368 - 11641508
Alignment:
Q  30 acattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttgat 129  Q
    ||||| ||||||||||| ||||| || |||| ||  |||||||| || |||||| |||| || || || || || ||||||||| | |  ||||| ||||    
T  11641368 acattattctcaaaagtcagcttcccttgatcaacaagcttcttcacgatgtacttcaaagcataacacccctcaacatcatgacctaaggcaccctgat 11641467  T
Q  130 ggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    | |||||||| ||||| ||||| | |||||| |||||||||    
T  11641468 gaaaatcacatttgagatcagacctgaaccttggaggcaac 11641508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #82
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 30 - 170
Target Start/End: Original strand, 19416492 - 19416632
Alignment:
Q  30 acattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttgat 129  Q
    ||||| ||||||||||| ||||| || ||||  ||||| ||||| || || ||  |||| || || || || |||||||||||| | || ||||||||||    
T  19416492 acattattctcaaaagtcagcttcccttgatcgatgagtttcttcacgatatatttcaaagcataacacccctcgacatcatgacctagggcaccttgat 19416591  T
Q  130 ggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    | || || || ||||| ||||| | |||||| |||||||||    
T  19416592 gaaagtcgcatttgagatcagacctgaaccttggaggcaac 19416632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #83
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 30 - 170
Target Start/End: Complemental strand, 39890322 - 39890182
Alignment:
Q  30 acattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttgat 129  Q
    ||||| ||||||||||| ||||| || |||| |||||| ||||| || || ||| |||  || || || || |||||||||||| | |  ||||||||||    
T  39890322 acattattctcaaaagtcagcttcccttgatcaatgagtttcttcacgatatacttcagagcataacacccctcgacatcatgacctaaggcaccttgat 39890223  T
Q  130 ggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    | || ||||| ||||| ||||  | |||||| |||||||||    
T  39890222 gaaagtcacatttgagatcagccctgaaccttggaggcaac 39890182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 115; Significance: 2e-58; HSPs: 16)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 28 - 170
Target Start/End: Original strand, 16208033 - 16208175
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttg 127  Q
    ||||||||||||||||||||| |||||| |||| |||||||||||| ||||||||| |||| |||||||||||||||||||||||| |||||||||||||    
T  16208033 ggacattgttctcaaaagttaactttccttgatcaatgagcttcttcacaatgtacttcaaagcgtagcatccttcgacatcatgacccagagcaccttg 16208132  T
Q  128 atggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  16208133 atggaaatcacacttgaggtcagaacggaacctgggaggcaac 16208175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 32 - 166
Target Start/End: Original strand, 20340341 - 20340475
Alignment:
Q  32 attgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttgatgg 131  Q
    ||||||||||||||||| |||||| || | |||||||||||| ||||||||| |||| |||||||||||||||||||||||| |||||||||||||||||    
T  20340341 attgttctcaaaagttaactttccttggttaatgagcttcttcacaatgtacttcaaagcgtagcatccttcgacatcatgacccagagcaccttgatgg 20340440  T
Q  132 aaatcacacttgaggtcagaacggaacctgggagg 166  Q
    ||||||||||||||||||||||||||||| |||||    
T  20340441 aaatcacacttgaggtcagaacggaacctaggagg 20340475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 63 - 170
Target Start/End: Complemental strand, 20461299 - 20461192
Alignment:
Q  63 atgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttgatggaaatcacacttgaggtcagaacggaacctgg 162  Q
    |||||||| |||||||||||| |||| |||||||||||||||||||||||| | |||||||||||||| |||||||||||||||||||||||||||||||    
T  20461299 atgagcttttttacaatgtacttcaaagcgtagcatccttcgacatcatgacctagagcaccttgatgaaaatcacacttgaggtcagaacggaacctgg 20461200  T
Q  163 gaggcaac 170  Q
    ||||||||    
T  20461199 gaggcaac 20461192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 28 - 173
Target Start/End: Complemental strand, 28152115 - 28151970
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttg 127  Q
    |||| |||||||||||||| | |||||| || | |||||||||||| ||||||||  |||| || ||||||||||||||||||||| |||||||||||||    
T  28152115 ggacgttgttctcaaaagtcaactttccttggttaatgagcttcttcacaatgtatttcaaagcatagcatccttcgacatcatgacccagagcaccttg 28152016  T
Q  128 atggaaatcacacttgaggtcagaacggaacctgggaggcaacaga 173  Q
    |||||||||||| ||||||||||| |||| ||||||||| ||||||    
T  28152015 atggaaatcacatttgaggtcagaccggagcctgggaggtaacaga 28151970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 170 - 259
Target Start/End: Complemental strand, 20459857 - 20459768
Alignment:
Q  170 cagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagc 259  Q
    ||||||||||||||| |||||||||||| ||||||||||||||| ||||||||||||||||||||||||| |||| ||||||||||||||    
T  20459857 cagagcagtcatggtgtcattggccttagccaattcttccctcagagaagctaactcggtacggagctgagcattttcttcttccatagc 20459768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 170 - 259
Target Start/End: Original strand, 16209530 - 16209619
Alignment:
Q  170 cagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagc 259  Q
    |||||||||||||||||||||||||||| ||||||||||||| | ||||||||||||||||||||||||| |||| || |||||||||||    
T  16209530 cagagcagtcatggtatcattggccttagccaattcttcccttagagaagctaactcggtacggagctgagcattttcctcttccatagc 16209619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 170 - 259
Target Start/End: Original strand, 20341145 - 20341234
Alignment:
Q  170 cagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagc 259  Q
    ||||||||||||||||| ||| |||||| ||||||||||||||| ||||||||||||||||||||||||| |||| ||||||||||||||    
T  20341145 cagagcagtcatggtattattagccttagccaattcttccctcagagaagctaactcggtacggagctgagcattttcttcttccatagc 20341234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 170 - 256
Target Start/End: Complemental strand, 28151810 - 28151724
Alignment:
Q  170 cagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccat 256  Q
    |||||||||||||||||||||||||||| ||||||||||||||| ||||||||| ||||||||||||||| |||| || ||||||||    
T  28151810 cagagcagtcatggtatcattggccttagccaattcttccctcagagaagctaattcggtacggagctgagcattttcctcttccat 28151724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 171 - 284
Target Start/End: Complemental strand, 10961418 - 10961305
Alignment:
Q  171 agagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttctttc 270  Q
    ||||||||||||   ||||| || ||| ||||||| ||| | | ||| ||||||||||| || |||||| | ||||||||||||||||||||||||||||    
T  10961418 agagcagtcatgacgtcattagctttagccaattcctcctttagagaggctaactcggtgcgaagctgagcgttctcttcttccatagcccttttctttc 10961319  T
Q  271 ttctgtattctctg 284  Q
    ||||||||||||||    
T  10961318 ttctgtattctctg 10961305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 171 - 284
Target Start/End: Complemental strand, 28583729 - 28583616
Alignment:
Q  171 agagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttctttc 270  Q
    ||||||||||||   ||||| || ||| ||||||| ||| | | ||| ||||||||||| || |||||| | ||||||||||||||||||||||||||||    
T  28583729 agagcagtcatgacgtcattagctttagccaattcctcctttagagaggctaactcggtgcgaagctgagcgttctcttcttccatagcccttttctttc 28583630  T
Q  271 ttctgtattctctg 284  Q
    ||||||||||||||    
T  28583629 ttctgtattctctg 28583616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 171 - 284
Target Start/End: Original strand, 41794815 - 41794928
Alignment:
Q  171 agagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttctttc 270  Q
    ||||||||||||   ||||| || ||| ||||||| ||| | | ||| ||||||||||| || |||||| | ||||||||||||||||||||||||||||    
T  41794815 agagcagtcatgacgtcattagctttagccaattcctcctttagagaggctaactcggtgcgaagctgagcgttctcttcttccatagcccttttctttc 41794914  T
Q  271 ttctgtattctctg 284  Q
    ||||||||||||||    
T  41794915 ttctgtattctctg 41794928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 171 - 284
Target Start/End: Complemental strand, 51636966 - 51636853
Alignment:
Q  171 agagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttctttc 270  Q
    ||||||||||||   ||||| || ||| ||||||| ||| | | ||| ||||||||||| || |||||| | ||||||||||||||||||||||||||||    
T  51636966 agagcagtcatgacgtcattagctttagccaattcctcctttagagaggctaactcggtgcgaagctgagcgttctcttcttccatagcccttttctttc 51636867  T
Q  271 ttctgtattctctg 284  Q
    ||||||||||||||    
T  51636866 ttctgtattctctg 51636853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 30 - 170
Target Start/End: Complemental strand, 51638469 - 51638329
Alignment:
Q  30 acattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttgat 129  Q
    ||||| ||||||||||| ||||| || |||| |||||||||||| ||||| ||| |||| || || || || |||||||||||| | |  ||||||||||    
T  51638469 acattattctcaaaagtcagcttcccttgatcaatgagcttcttcacaatatacttcaaagcataacacccctcgacatcatgacctaaggcaccttgat 51638370  T
Q  130 ggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    | |||||||| ||||| ||||| | |||||| |||||||||    
T  51638369 gaaaatcacatttgagatcagacctgaaccttggaggcaac 51638329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 28 - 170
Target Start/End: Complemental strand, 10962923 - 10962781
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttg 127  Q
    ||||||| ||||||||||| ||||| || ||||  ||||||||||| || || ||| |||| || || || || |||||||||||| |||| ||||||||    
T  10962923 ggacattattctcaaaagtcagcttcccttgatcgatgagcttcttcacgatatacttcaaagcataacacccctcgacatcatgacccagggcaccttg 10962824  T
Q  128 atggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    ||| || ||||| ||||| ||||| | |||||| |||||||||    
T  10962823 atgaaagtcacatttgagatcagacctgaaccttggaggcaac 10962781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 28 - 170
Target Start/End: Complemental strand, 28585234 - 28585092
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttg 127  Q
    ||||||| ||||||||||| ||||| || ||||  ||||||||||| || || ||| |||| || || || || ||||| |||||| |||  ||||||||    
T  28585234 ggacattattctcaaaagtcagcttcccttgatcgatgagcttcttcacgatatacttcaaagcataacacccctcgacgtcatgacccaaggcaccttg 28585135  T
Q  128 atggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    ||| || || || ||||| ||||| | |||||| |||||||||    
T  28585134 atgaaagtcgcatttgagatcagacctgaaccttggaggcaac 28585092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 170
Target Start/End: Original strand, 41793312 - 41793452
Alignment:
Q  30 acattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttgat 129  Q
    ||||| ||||||||||| ||||| || ||||  | ||||||||| || || ||| |||| || || || || ||||| |||||| | |  ||||||||||    
T  41793312 acattattctcaaaagtcagcttcccttgatcgacgagcttcttcacgatatacttcaaagcataacacccctcgacgtcatgacctaaggcaccttgat 41793411  T
Q  130 ggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    | |||||||| ||||| ||||| | |||||| |||||||||    
T  41793412 gaaaatcacatttgagatcagacctgaaccttggaggcaac 41793452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 111; Significance: 5e-56; HSPs: 95)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 28 - 166
Target Start/End: Original strand, 27290315 - 27290453
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttg 127  Q
    ||||||||||||||||||||| |||||| |||| |||||||||||| ||||||||| ||||||||||||||||||||||||||||| |||||||||||||    
T  27290315 ggacattgttctcaaaagttaactttccttgatcaatgagcttcttcacaatgtacttcaacgcgtagcatccttcgacatcatgacccagagcaccttg 27290414  T
Q  128 atggaaatcacacttgaggtcagaacggaacctgggagg 166  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  27290415 atggaaatcacacttgaggtcagaacggaacttgggagg 27290453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 36 - 170
Target Start/End: Original strand, 22456887 - 22457021
Alignment:
Q  36 ttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttgatggaaat 135  Q
    ||||||||||||| |||||| || |  ||||||||||| ||||||||| | || |||||||||||||||||||||||| |||||||||||||||||||||    
T  22456887 ttctcaaaagttaactttccttggtctatgagcttcttcacaatgtactttaaagcgtagcatccttcgacatcatgacccagagcaccttgatggaaat 22456986  T
Q  136 cacacttgaggtcagaacggaacctgggaggcaac 170  Q
    |||||||||||| ||||||||||||||||||||||    
T  22456987 cacacttgaggtaagaacggaacctgggaggcaac 22457021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 63 - 170
Target Start/End: Original strand, 22477253 - 22477360
Alignment:
Q  63 atgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttgatggaaatcacacttgaggtcagaacggaacctgg 162  Q
    ||||||||||| ||||||||| | || |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||    
T  22477253 atgagcttcttcacaatgtactttaaagcgtagcatccttcgacatcatgacccagagcaccttgatggaaatcacacttgaggttagaacggaacctgg 22477352  T
Q  163 gaggcaac 170  Q
    ||||||||    
T  22477353 gaggcaac 22477360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 28 - 166
Target Start/End: Original strand, 14143230 - 14143368
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttg 127  Q
    |||| |||||||||||||| | |||||| || | |||||||||||| ||||||||  |||| || ||||||||||||||||||||| |||||||||||||    
T  14143230 ggacgttgttctcaaaagtcaactttccttggttaatgagcttcttcacaatgtatttcaaagcatagcatccttcgacatcatgacccagagcaccttg 14143329  T
Q  128 atggaaatcacacttgaggtcagaacggaacctgggagg 166  Q
    |||||||||||| ||||||||||| ||||||||||||||    
T  14143330 atggaaatcacatttgaggtcagaccggaacctgggagg 14143368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 28 - 166
Target Start/End: Complemental strand, 26788195 - 26788057
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttg 127  Q
    |||| |||||||||||||| | |||||| || | |||||||||||| ||||||||  |||| || ||||||||||||||||||||| |||||||||||||    
T  26788195 ggacgttgttctcaaaagtcaactttccttggttaatgagcttcttcacaatgtatttcaaagcatagcatccttcgacatcatgacccagagcaccttg 26788096  T
Q  128 atggaaatcacacttgaggtcagaacggaacctgggagg 166  Q
    |||||||||||| ||||||||||| ||||||||||||||    
T  26788095 atggaaatcacatttgaggtcagaccggaacctgggagg 26788057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 28 - 166
Target Start/End: Complemental strand, 27196568 - 27196430
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttg 127  Q
    |||| |||||||||||||| | |||||| || | |||||||||||| ||||||||  |||| || ||||||||||||||||||||| |||||||||||||    
T  27196568 ggacgttgttctcaaaagtcaactttccttggttaatgagcttcttcacaatgtatttcaaagcatagcatccttcgacatcatgacccagagcaccttg 27196469  T
Q  128 atggaaatcacacttgaggtcagaacggaacctgggagg 166  Q
    |||||||||||| ||||||||||| ||||||||||||||    
T  27196468 atggaaatcacatttgaggtcagaccggaacctgggagg 27196430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 28 - 166
Target Start/End: Original strand, 27252672 - 27252810
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttg 127  Q
    |||| |||||||||||||| | |||||| || | |||||||||||| ||||||||  |||| || ||||||||||||||||||||| |||||||||||||    
T  27252672 ggacgttgttctcaaaagtcaactttccttggttaatgagcttcttcacaatgtatttcaaagcatagcatccttcgacatcatgacccagagcaccttg 27252771  T
Q  128 atggaaatcacacttgaggtcagaacggaacctgggagg 166  Q
    |||||||||||| ||||||||||| ||||||||||||||    
T  27252772 atggaaatcacatttgaggtcagaccggaacctgggagg 27252810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 63 - 167
Target Start/End: Original strand, 33374236 - 33374340
Alignment:
Q  63 atgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttgatggaaatcacacttgaggtcagaacggaacctgg 162  Q
    ||||| || |||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| ||||||||| |||    
T  33374236 atgagtttttttacaatgtacctcaacgcgtagcatccttcgacatcatgacccatagcaccttgatggaaatcacacttgaggtccgaacggaacttgg 33374335  T
Q  163 gaggc 167  Q
    |||||    
T  33374336 gaggc 33374340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 72 - 167
Target Start/End: Original strand, 8892299 - 8892394
Alignment:
Q  72 tttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttgatggaaatcacacttgaggtcagaacggaacctgggaggc 167  Q
    |||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| ||||||||| ||||||||    
T  8892299 tttacaatgtacctcaacgcgtagcatccttcgacatcatgacccatagcaccttgatggaaatcacacttgaggtccgaacggaacttgggaggc 8892394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 72 - 167
Target Start/End: Original strand, 8903534 - 8903629
Alignment:
Q  72 tttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttgatggaaatcacacttgaggtcagaacggaacctgggaggc 167  Q
    |||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| ||||||||| ||||||||    
T  8903534 tttacaatgtacctcaacgcgtagcatccttcgacatcatgacccatagcaccttgatggaaatcacacttgaggtccgaacggaacttgggaggc 8903629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 28 - 167
Target Start/End: Original strand, 13522018 - 13522157
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttg 127  Q
    |||| |||||||||||||| | |||||| || | |||||||||||| |||||||   |||| || ||||||||||||||||||||| |||||||||||||    
T  13522018 ggacgttgttctcaaaagtcaactttccttggttaatgagcttcttcacaatgtgtttcaaagcatagcatccttcgacatcatgacccagagcaccttg 13522117  T
Q  128 atggaaatcacacttgaggtcagaacggaacctgggaggc 167  Q
    ||||||||||||||||||||| ||||||||| ||||||||    
T  13522118 atggaaatcacacttgaggtccgaacggaacttgggaggc 13522157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 63 - 167
Target Start/End: Complemental strand, 28162873 - 28162769
Alignment:
Q  63 atgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttgatggaaatcacacttgaggtcagaacggaacctgg 162  Q
    ||||| || |||||||||||||||||||||||||||||| ||||||||||| ||| |||||||||||||||||||||||||||||| ||||||||| |||    
T  28162873 atgagtttttttacaatgtacctcaacgcgtagcatcctccgacatcatgacccatagcaccttgatggaaatcacacttgaggtccgaacggaacttgg 28162774  T
Q  163 gaggc 167  Q
    |||||    
T  28162773 gaggc 28162769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 170 - 259
Target Start/End: Original strand, 27290617 - 27290706
Alignment:
Q  170 cagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagc 259  Q
    |||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||| ||||||||||||||| ||||||||||||||    
T  27290617 cagagcagtcatggtatcattggccttaaccaattcttccctcagagaagctaactcggcacggagctgaacattttcttcttccatagc 27290706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 28 - 170
Target Start/End: Original strand, 22934825 - 22934967
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttg 127  Q
    ||||||| |||||||||||||||||||| |||| |||||||||||| || || ||| |||| || ||||| || |||||||||||| |||| || |||||    
T  22934825 ggacattattctcaaaagttagctttccttgatcaatgagcttcttcacgatatacttcaaagcatagcacccctcgacatcatgacccagggcgccttg 22934924  T
Q  128 atggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    |||||||||||| |||||||| || | ||||||||||||||||    
T  22934925 atggaaatcacatttgaggtcggacctgaacctgggaggcaac 22934967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 28 - 170
Target Start/End: Original strand, 23857270 - 23857412
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttg 127  Q
    ||||||| |||||||||||||||||||| |||| |||||||||||| || || ||| |||| || ||||| || |||||||||||| |||| || |||||    
T  23857270 ggacattattctcaaaagttagctttccttgatcaatgagcttcttcacgatatacttcaaagcatagcacccctcgacatcatgacccagggcgccttg 23857369  T
Q  128 atggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    |||||||||||| |||||||| || | ||||||||||||||||    
T  23857370 atggaaatcacatttgaggtcggacctgaacctgggaggcaac 23857412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 170 - 284
Target Start/End: Complemental strand, 26787890 - 26787776
Alignment:
Q  170 cagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttcttt 269  Q
    ||||||||||||||| |||||| ||||| ||||||||||||||| ||||| ||||||||||||||||||    |||||||||||||||||| ||||| ||    
T  26787890 cagagcagtcatggtgtcattgaccttagccaattcttccctcagagaagttaactcggtacggagctgcgtgttctcttcttccatagcctttttcctt 26787791  T
Q  270 cttctgtattctctg 284  Q
    |||||||||||||||    
T  26787790 cttctgtattctctg 26787776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 170 - 282
Target Start/End: Original strand, 14143535 - 14143647
Alignment:
Q  170 cagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttcttt 269  Q
    ||||||||||||||| |||||| ||||| ||||||||||||||| ||||| ||||||||||||||||||    |||||||||||||||||| ||||| ||    
T  14143535 cagagcagtcatggtgtcattgaccttagccaattcttccctcagagaagttaactcggtacggagctgcgtgttctcttcttccatagcctttttcctt 14143634  T
Q  270 cttctgtattctc 282  Q
    |||||||||||||    
T  14143635 cttctgtattctc 14143647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 170 - 282
Target Start/End: Complemental strand, 27196263 - 27196151
Alignment:
Q  170 cagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttcttt 269  Q
    ||||||||||||||| |||||| ||||| ||||||||||||||| ||||| ||||||||||||||||||    |||||||||||||||||| ||||| ||    
T  27196263 cagagcagtcatggtgtcattgaccttagccaattcttccctcagagaagttaactcggtacggagctgcgtgttctcttcttccatagcctttttcctt 27196164  T
Q  270 cttctgtattctc 282  Q
    |||||||||||||    
T  27196163 cttctgtattctc 27196151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 170 - 282
Target Start/End: Original strand, 27252977 - 27253089
Alignment:
Q  170 cagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttcttt 269  Q
    ||||||||||||||| |||||| ||||| ||||||||||||||| ||||| ||||||||||||||||||    |||||||||||||||||| ||||| ||    
T  27252977 cagagcagtcatggtgtcattgaccttagccaattcttccctcagagaagttaactcggtacggagctgcgtgttctcttcttccatagcctttttcctt 27253076  T
Q  270 cttctgtattctc 282  Q
    |||||||||||||    
T  27253077 cttctgtattctc 27253089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 170 - 284
Target Start/End: Original strand, 27631158 - 27631272
Alignment:
Q  170 cagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttcttt 269  Q
    |||||||||||||  |||||| || ||| ||||||| ||||| | ||  ||||||||||| ||||||||| | |||||||||||||||||||||||||||    
T  27631158 cagagcagtcatgacatcattagctttagccaattcctcccttagagtggctaactcggtgcggagctgagcgttctcttcttccatagcccttttcttt 27631257  T
Q  270 cttctgtattctctg 284  Q
    |||||||||||||||    
T  27631258 cttctgtattctctg 27631272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 170 - 259
Target Start/End: Original strand, 22477911 - 22478000
Alignment:
Q  170 cagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagc 259  Q
    ||||||||||| |||||||||||||||| |||||| |||||| | ||||||||||||||||||||||||| |||| ||||||||||||||    
T  22477911 cagagcagtcaaggtatcattggccttagccaattattccctaagagaagctaactcggtacggagctgagcattttcttcttccatagc 22478000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 28 - 170
Target Start/End: Complemental strand, 16750105 - 16749963
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttg 127  Q
    ||||||| ||||||||||| |||||||| |||| |||||||||||| || || ||| |||| || ||||| || |||||||||||| |||| || |||||    
T  16750105 ggacattattctcaaaagtcagctttccttgatcaatgagcttcttcacgatatacttcaaagcatagcacccctcgacatcatgacccagggcgccttg 16750006  T
Q  128 atggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    ||| |||||||| ||||| ||||| | |||||| |||||||||    
T  16750005 atgaaaatcacatttgagatcagacctgaaccttggaggcaac 16749963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 170 - 284
Target Start/End: Complemental strand, 26917128 - 26917014
Alignment:
Q  170 cagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttcttt 269  Q
    |||||||||||||  |||||| || ||| ||||||| ||||| | ||  ||||||||||||||||||||| | |||||||||||||||||| ||||| ||    
T  26917128 cagagcagtcatgacatcattagctttagccaattcctcccttagagtggctaactcggtacggagctgagcgttctcttcttccatagcctttttcctt 26917029  T
Q  270 cttctgtattctctg 284  Q
    |||||||||||||||    
T  26917028 cttctgtattctctg 26917014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 28 - 170
Target Start/End: Complemental strand, 26989252 - 26989110
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttg 127  Q
    ||||||| ||||||||||| |||||||| |||| ||||||||||||||| || ||| |||| || ||||| || |||||||||||| |||| || |||||    
T  26989252 ggacattattctcaaaagtcagctttccttgatcaatgagcttctttacgatatacttcaaagcatagcacccctcgacatcatgacccagggcgccttg 26989153  T
Q  128 atggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    ||| |||||||| ||||| || || | |||||| |||||||||    
T  26989152 atgaaaatcacatttgagatcggacctgaaccttggaggcaac 26989110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 170 - 284
Target Start/End: Complemental strand, 28162082 - 28161968
Alignment:
Q  170 cagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttcttt 269  Q
    |||||||||||||  |||||| || ||| ||||||| ||||| | ||  ||||||||||||||||||||| | |||||||||||||||||| ||||| ||    
T  28162082 cagagcagtcatgacatcattagctttagccaattcctcccttagagtggctaactcggtacggagctgagcgttctcttcttccatagcctttttcctt 28161983  T
Q  270 cttctgtattctctg 284  Q
    |||||||||||||||    
T  28161982 cttctgtattctctg 28161968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 30 - 170
Target Start/End: Original strand, 4545722 - 4545862
Alignment:
Q  30 acattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttgat 129  Q
    ||||||||||||||||| ||||||||||||| |||||||||||| || || ||| |||| || || || || |||||||||||| | | |||||||||||    
T  4545722 acattgttctcaaaagtcagctttccctgatcaatgagcttcttcacgatatacttcaaagcataacacccctcgacatcatgacctaaagcaccttgat 4545821  T
Q  130 ggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    | || ||||| ||||| ||||| | |||||| |||||||||    
T  4545822 gaaagtcacatttgagatcagacctgaaccttggaggcaac 4545862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 170 - 284
Target Start/End: Original strand, 8893081 - 8893195
Alignment:
Q  170 cagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttcttt 269  Q
    |||||||||||||  |||||| || ||| ||||||| ||||| | ||  ||||||||||||||||||||| | |||||||||||||||||| ||||| ||    
T  8893081 cagagcagtcatgacatcattagctttagccaattcctcccttagagtggctaactcggtacggagctgagcgttctcttcttccatagcctttttcctt 8893180  T
Q  270 cttctgtattctctg 284  Q
    |||||||| ||||||    
T  8893181 cttctgtactctctg 8893195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 170 - 284
Target Start/End: Original strand, 8904316 - 8904430
Alignment:
Q  170 cagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttcttt 269  Q
    |||||||||||||  |||||| || ||| ||||||| ||||| | ||  ||||||||||||||||||||| | |||||||||||||||||| ||||| ||    
T  8904316 cagagcagtcatgacatcattagctttagccaattcctcccttagagtggctaactcggtacggagctgagcgttctcttcttccatagcctttttcctt 8904415  T
Q  270 cttctgtattctctg 284  Q
    |||||||| ||||||    
T  8904416 cttctgtactctctg 8904430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 28 - 170
Target Start/End: Original strand, 13298896 - 13299038
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttg 127  Q
    ||||||| ||||||||||| |||||||| |||| |||||||||||| || || ||| |||| | ||||||||| ||||| |||||| |||| || |||||    
T  13298896 ggacattattctcaaaagtcagctttccttgatcaatgagcttcttcacgatatacttcaaagtgtagcatccctcgacgtcatgacccagggcgccttg 13298995  T
Q  128 atggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    ||| |||||||| ||||| || || | |||||| |||||||||    
T  13298996 atgaaaatcacatttgagatcggacctgaaccttggaggcaac 13299038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 170 - 284
Target Start/End: Original strand, 13522844 - 13522958
Alignment:
Q  170 cagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttcttt 269  Q
    |||||||||||||  |||||| || ||| ||||||| ||||| | ||  ||||||||||||||||||||| | |||||||||||||||||| ||||| ||    
T  13522844 cagagcagtcatgacatcattagctttagccaattcctcccttagagtggctaactcggtacggagctgagcgttctcttcttccatagcctttttcctt 13522943  T
Q  270 cttctgtattctctg 284  Q
    |||||||| ||||||    
T  13522944 cttctgtactctctg 13522958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 28 - 170
Target Start/End: Original strand, 24304563 - 24304705
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttg 127  Q
    ||||||| ||||||||||| |||||||| |||| |||||||||||| || || ||| ||||  | ||||| || |||||||||||| |||| ||||||||    
T  24304563 ggacattattctcaaaagtcagctttccttgatcaatgagcttcttcacgatatacttcaaatcatagcacccctcgacatcatgacccagggcaccttg 24304662  T
Q  128 atggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    ||| |||||||| ||||| || || | |||||| |||||||||    
T  24304663 atgaaaatcacatttgagatcggacctgaaccttggaggcaac 24304705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 28 - 170
Target Start/End: Complemental strand, 24863968 - 24863826
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttg 127  Q
    ||||||| ||||||||||| |||||||| |||| |||||||||||| || || ||| |||| || ||||| || |||||||||||| |||| || |||||    
T  24863968 ggacattattctcaaaagtcagctttccttgatcaatgagcttcttcacgatatacttcaaagcatagcacccctcgacatcatgacccagggcgccttg 24863869  T
Q  128 atggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    ||| |||||||| ||||| || || | |||||| |||||||||    
T  24863868 atgaaaatcacatttgagatcggacctgaaccttggaggcaac 24863826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 28 - 170
Target Start/End: Complemental strand, 26918631 - 26918489
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttg 127  Q
    ||||||| ||||||||||| |||||||| |||| ||| ||||| || || || ||| |||| |||||||| || |||||||||||| |||| || |||||    
T  26918631 ggacattattctcaaaagtcagctttccttgatcaataagctttttcacgatatacttcaaagcgtagcacccctcgacatcatgacccagggcgccttg 26918532  T
Q  128 atggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    ||| |||||||| ||||| ||||| | |||||| |||||||||    
T  26918531 atgaaaatcacatttgagatcagacctgaaccttggaggcaac 26918489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 28 - 170
Target Start/End: Complemental strand, 29549726 - 29549584
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttg 127  Q
    ||||||| ||||||||||| |||||||| |||| |||||||||||| || || ||| |||| || || || || |||||||||||| | || ||||||||    
T  29549726 ggacattattctcaaaagtcagctttccttgatcaatgagcttcttcacgatatacttcaaagcataacacccctcgacatcatgacctagggcaccttg 29549627  T
Q  128 atggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    ||| |||||||| ||||| ||||| | |||||| |||||||||    
T  29549626 atgaaaatcacatttgagatcagacctgaaccttggaggcaac 29549584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 170 - 284
Target Start/End: Original strand, 33375027 - 33375141
Alignment:
Q  170 cagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttcttt 269  Q
    |||||||||||||  |||||| || ||| ||||||| ||||| | ||  ||||||||||||||||||||| | |||||||||||||||||| ||||| ||    
T  33375027 cagagcagtcatgacatcattagctttagccaattcctcccttagagtggctaactcggtacggagctgagcgttctcttcttccatagcctttttcctt 33375126  T
Q  270 cttctgtattctctg 284  Q
    |||||||| ||||||    
T  33375127 cttctgtactctctg 33375141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 171 - 284
Target Start/End: Original strand, 16945477 - 16945590
Alignment:
Q  171 agagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttctttc 270  Q
    ||||||||||||   ||||| || ||| ||||||| ||| | | ||| ||||||||||| || |||||| | ||||||||||||||||||||||||||||    
T  16945477 agagcagtcatgacgtcattagctttagccaattcctcctttagagaggctaactcggtgcgaagctgagcgttctcttcttccatagcccttttctttc 16945576  T
Q  271 ttctgtattctctg 284  Q
    ||||||||||||||    
T  16945577 ttctgtattctctg 16945590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 167 - 284
Target Start/End: Original strand, 26117847 - 26117964
Alignment:
Q  167 caacagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttc 266  Q
    ||||||||||||||| | |||||  || ||  ||||||| ||||| ||||| || || ||||||||||||||    ||||||||||||||||||||||||    
T  26117847 caacagagcagtcatagcatcatgagctttggccaattcctcccttaaagatgccaattcggtacggagctgtgtgttctcttcttccatagcccttttc 26117946  T
Q  267 tttcttctgtattctctg 284  Q
    ||||||||||||||||||    
T  26117947 tttcttctgtattctctg 26117964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 171 - 284
Target Start/End: Complemental strand, 29571759 - 29571646
Alignment:
Q  171 agagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttctttc 270  Q
    ||||||||||||   ||||| || ||| ||||||| ||| | | ||| ||||||||||| || |||||| | ||||||||||||||||||||||||||||    
T  29571759 agagcagtcatgacgtcattagctttagccaattcctcctttagagaggctaactcggtgcgaagctgagcgttctcttcttccatagcccttttctttc 29571660  T
Q  271 ttctgtattctctg 284  Q
    ||||||||||||||    
T  29571659 ttctgtattctctg 29571646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 30 - 170
Target Start/End: Complemental strand, 4525535 - 4525395
Alignment:
Q  30 acattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttgat 129  Q
    ||||||||||||||||| ||||||||||||| |||||||||||| ||||| ||| |||| || || || || |||||||||||| | |  ||||||||||    
T  4525535 acattgttctcaaaagtcagctttccctgatcaatgagcttcttcacaatatacttcaaagcataacacccctcgacatcatgacctaaggcaccttgat 4525436  T
Q  130 ggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    | || ||||| ||| | ||||| | |||||| |||||||||    
T  4525435 gaaagtcacatttgggatcagacctgaaccttggaggcaac 4525395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 30 - 170
Target Start/End: Complemental strand, 4758013 - 4757873
Alignment:
Q  30 acattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttgat 129  Q
    ||||| ||||||||||| ||||||||||||| |||||||||||| || || ||| |||| || || ||||| |||||||||||| | |  ||||||||||    
T  4758013 acattattctcaaaagtcagctttccctgatcaatgagcttcttcacgatatacttcaaagcataacatccctcgacatcatgacctaaggcaccttgat 4757914  T
Q  130 ggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    | || ||||| ||||| ||||| | |||||| |||||||||    
T  4757913 gaaagtcacatttgagatcagacctgaaccttggaggcaac 4757873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 30 - 170
Target Start/End: Complemental strand, 4773255 - 4773115
Alignment:
Q  30 acattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttgat 129  Q
    ||||| ||||||||||| ||||||||||||| |||||||||||| || || ||| |||| || || || || |||||||||||| | | |||||||||||    
T  4773255 acattattctcaaaagtcagctttccctgatcaatgagcttcttcacgatatacttcaaagcataacacccctcgacatcatgacctaaagcaccttgat 4773156  T
Q  130 ggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    | || ||||| ||||| ||||| | |||||| |||||||||    
T  4773155 gaaagtcacatttgagatcagacctgaaccttggaggcaac 4773115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 30 - 170
Target Start/End: Original strand, 27359939 - 27360079
Alignment:
Q  30 acattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttgat 129  Q
    ||||| ||||||||||| ||||||||||||| |||||||||||| || || ||| |||| || || ||||| |||||||||||| | |  ||||||||||    
T  27359939 acattattctcaaaagtcagctttccctgatcaatgagcttcttcacgatatacttcaaagcataacatccctcgacatcatgacctaaggcaccttgat 27360038  T
Q  130 ggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    | || ||||| ||||| ||||| | |||||| |||||||||    
T  27360039 gaaagtcacatttgagatcagacctgaaccttggaggcaac 27360079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 30 - 170
Target Start/End: Original strand, 27450282 - 27450422
Alignment:
Q  30 acattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttgat 129  Q
    ||||| ||||||||||| ||||||||||||| |||||||||||| || || ||| |||| || || ||||| |||||||||||| | |  ||||||||||    
T  27450282 acattattctcaaaagtcagctttccctgatcaatgagcttcttcacgatatacttcaaagcataacatccctcgacatcatgacctaaggcaccttgat 27450381  T
Q  130 ggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    | || ||||| ||||| ||||| | |||||| |||||||||    
T  27450382 gaaagtcacatttgagatcagacctgaaccttggaggcaac 27450422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 30 - 170
Target Start/End: Original strand, 34463293 - 34463433
Alignment:
Q  30 acattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttgat 129  Q
    ||||| ||||||||||| ||||||||||||| |||||||||||| || || ||| |||| || || || || |||||||||||| | |  ||||||||||    
T  34463293 acattattctcaaaagtcagctttccctgatcaatgagcttcttcacgatatacttcaaagcataacacccctcgacatcatgacctaaggcaccttgat 34463392  T
Q  130 ggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    | |||||||| ||||| ||||| | |||||| |||||||||    
T  34463393 gaaaatcacatttgagatcagacctgaaccttggaggcaac 34463433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 28 - 170
Target Start/End: Complemental strand, 27000324 - 27000182
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttg 127  Q
    ||||||| ||||||||||| |||||||| |||| ||||||||| || || || ||| |||| || ||||| || |||||||||||| |||| || |||||    
T  27000324 ggacattattctcaaaagtcagctttccttgatcaatgagctttttcacgatatacttcaaagcatagcacccctcgacatcatgacccagggcgccttg 27000225  T
Q  128 atggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    ||| |||||||| ||||| || || | |||||| |||||||||    
T  27000224 atgaaaatcacatttgagatcggacctgaaccttggaggcaac 27000182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 167 - 284
Target Start/End: Complemental strand, 3694870 - 3694753
Alignment:
Q  167 caacagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttc 266  Q
    ||||||||||||||| | |||||  || ||  ||||||| ||||| ||||| || || |||||||| |||||    ||||||||||||||||||||||||    
T  3694870 caacagagcagtcatagcatcatgagctttggccaattcctcccttaaagatgccaattcggtacgaagctgcgtgttctcttcttccatagcccttttc 3694771  T
Q  267 tttcttctgtattctctg 284  Q
    ||||||||||||||||||    
T  3694770 tttcttctgtattctctg 3694753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 167 - 284
Target Start/End: Original strand, 4725571 - 4725688
Alignment:
Q  167 caacagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttc 266  Q
    ||||||||||||||| | |||||  || ||  ||||||| ||||| | ||| || || ||||||||||||||    ||||||||||||||||||||||||    
T  4725571 caacagagcagtcatagcatcatgagctttggccaattcctcccttagagatgccaattcggtacggagctgtgtgttctcttcttccatagcccttttc 4725670  T
Q  267 tttcttctgtattctctg 284  Q
    ||||||||||||||||||    
T  4725671 tttcttctgtattctctg 4725688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 30 - 167
Target Start/End: Original strand, 27272527 - 27272664
Alignment:
Q  30 acattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttgat 129  Q
    ||||| |||||||| || ||||| || ||||  |||||||| || || || ||| |||| || ||||| || |||||||||||| ||||||| |||||||    
T  27272527 acattattctcaaaggtcagcttcccttgatcgatgagctttttcacgatatacttcaaagcatagcacccctcgacatcatgacccagagcgccttgat 27272626  T
Q  130 ggaaatcacacttgaggtcagaacggaacctgggaggc 167  Q
    |||||||||| |||||||| || | |||||||||||||    
T  27272627 ggaaatcacatttgaggtcggacctgaacctgggaggc 27272664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 171 - 284
Target Start/End: Original strand, 30559466 - 30559579
Alignment:
Q  171 agagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttctttc 270  Q
    ||||||||||||   ||||| || ||| ||||||| ||| | | ||| |||| |||||| || |||||| | ||||||||||||||||||||||||||||    
T  30559466 agagcagtcatgacgtcattagctttagccaattcctcctttagagaggctacctcggtgcgaagctgagcgttctcttcttccatagcccttttctttc 30559565  T
Q  271 ttctgtattctctg 284  Q
    ||||||||||||||    
T  30559566 ttctgtattctctg 30559579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 167 - 284
Target Start/End: Original strand, 34464789 - 34464906
Alignment:
Q  167 caacagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttc 266  Q
    ||||||||||||||| | |||||  || ||  ||||||| ||||| ||||| || || |||||||| |||||    ||||||||||||||||||||||||    
T  34464789 caacagagcagtcatagcatcatgagctttggccaattcctcccttaaagatgccaattcggtacgaagctgcgtgttctcttcttccatagcccttttc 34464888  T
Q  267 tttcttctgtattctctg 284  Q
    ||||||||||||||||||    
T  34464889 tttcttctgtattctctg 34464906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 30 - 170
Target Start/End: Original strand, 4724081 - 4724221
Alignment:
Q  30 acattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttgat 129  Q
    ||||||||||||||||| ||||||||||||| |||||| ||||| || || ||| |||| || || || || |||||||||||| | |  ||||||||||    
T  4724081 acattgttctcaaaagtcagctttccctgatcaatgagtttcttcacgatatacttcaaagcataacacccctcgacatcatgacctaaggcaccttgat 4724180  T
Q  130 ggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    | || ||||| ||||| ||||| | |||||| |||||||||    
T  4724181 gaaagtcacatttgagatcagacctgaaccttggaggcaac 4724221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 30 - 170
Target Start/End: Original strand, 26116357 - 26116497
Alignment:
Q  30 acattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttgat 129  Q
    ||||| ||||||||||| ||||||||||||| |||||||||||| || || ||| |||| || || || || |||||||||||| | |  ||||||||||    
T  26116357 acattattctcaaaagtcagctttccctgatcaatgagcttcttcacgatatacttcaaagcataacacccctcgacatcatgacctaaggcaccttgat 26116456  T
Q  130 ggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    | || ||||| ||||| ||||| | |||||| |||||||||    
T  26116457 gaaagtcacatttgagatcagacctgaaccttggaggcaac 26116497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 30 - 170
Target Start/End: Complemental strand, 27007976 - 27007836
Alignment:
Q  30 acattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttgat 129  Q
    ||||| ||||||||||| ||||||||||| | |||||||||||| || || ||| |||| || || || || |||||||||||| | |  ||||||||||    
T  27007976 acattattctcaaaagtcagctttccctggtcaatgagcttcttcacgatatacttcaaagcataacacccctcgacatcatgacctaaggcaccttgat 27007877  T
Q  130 ggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    | |||||||| ||||| ||||| | |||||| |||||||||    
T  27007876 gaaaatcacatttgagatcagacctgaaccttggaggcaac 27007836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 185 - 256
Target Start/End: Original strand, 15425781 - 15425852
Alignment:
Q  185 atcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccat 256  Q
    ||||||||||||| ||||||||||||| | ||  ||||||||||||||||||||| ||||||||||||||||    
T  15425781 atcattggccttagccaattcttcccttagagtggctaactcggtacggagctgagcattctcttcttccat 15425852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 28 - 170
Target Start/End: Original strand, 15424262 - 15424404
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttg 127  Q
    ||||||| ||||||||||| |||||||| |||| ||||||||| || || || ||| |||| || ||||| || |||||||||||| |||  || |||||    
T  15424262 ggacattattctcaaaagtcagctttccttgatcaatgagctttttcacgatatacttcaaagcatagcacccctcgacatcatgacccaaggcgccttg 15424361  T
Q  128 atggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    ||| |||||||| ||||| || || | |||||| |||||||||    
T  15424362 atgaaaatcacatttgagatcggacctgaaccttggaggcaac 15424404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 28 - 170
Target Start/End: Complemental strand, 16674390 - 16674248
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttg 127  Q
    ||||||| ||||||||||| ||||| || |||| |||||||||||| || || ||| |||| || || || || |||||||||||| | |  ||||||||    
T  16674390 ggacattattctcaaaagtcagcttcccttgatcaatgagcttcttcacgatatacttcaaagcataacacccctcgacatcatgacctaaggcaccttg 16674291  T
Q  128 atggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    ||| |||||||| ||||| ||||| | |||||| |||||||||    
T  16674290 atgaaaatcacatttgagatcagacctgaaccttggaggcaac 16674248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 170 - 284
Target Start/End: Complemental strand, 16748601 - 16748488
Alignment:
Q  170 cagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttcttt 269  Q
    |||||||||||||  |||||| || ||| ||||||| ||||| | ||  ||||||||  ||||||||||| | |||||||||||||||||| ||||| ||    
T  16748601 cagagcagtcatgacatcattagctttagccaattcctcccttagagtggctaactct-tacggagctgagcgttctcttcttccatagcctttttcctt 16748503  T
Q  270 cttctgtattctctg 284  Q
    |||||||||||||||    
T  16748502 cttctgtattctctg 16748488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 170 - 256
Target Start/End: Complemental strand, 24862464 - 24862378
Alignment:
Q  170 cagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccat 256  Q
    |||||||||||||  |||||| |||||| ||||||||||||| | ||  ||||||||||||||||||||| |||| |||||||||||    
T  24862464 cagagcagtcatgacatcattagccttagccaattcttcccttagagtggctaactcggtacggagctgagcattttcttcttccat 24862378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 28 - 170
Target Start/End: Original strand, 30557961 - 30558103
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttg 127  Q
    ||||||| ||||||||||| ||||||||||||| |||||||||||| || || ||| |||| || || || || |||||||||||| | |  ||||||||    
T  30557961 ggacattattctcaaaagtcagctttccctgatcaatgagcttcttcacgatatacttcaaagcataacacccctcgacatcatgacctaaggcaccttg 30558060  T
Q  128 atggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    ||| || ||||| || || ||||| | |||||| |||||||||    
T  30558061 atgaaagtcacatttaagatcagacctgaaccttggaggcaac 30558103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 167 - 284
Target Start/End: Complemental strand, 4524057 - 4523940
Alignment:
Q  167 caacagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttc 266  Q
    ||||||||||||||| | |||||  || ||  ||||||| ||||| | ||| || || |||||||| |||||    ||||||||||||||||||||||||    
T  4524057 caacagagcagtcatagcatcatgagctttggccaattcctcccttagagatgccaattcggtacgaagctgtgtgttctcttcttccatagcccttttc 4523958  T
Q  267 tttcttctgtattctctg 284  Q
    ||||||||||||||||||    
T  4523957 tttcttctgtattctctg 4523940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 167 - 284
Target Start/End: Original strand, 4547212 - 4547329
Alignment:
Q  167 caacagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttc 266  Q
    ||||||||||||||| | |||||  || ||  ||||||| ||||| | ||| || || |||||||| |||||    ||||||||||||||||||||||||    
T  4547212 caacagagcagtcatagcatcatgagctttggccaattcctcccttagagatgccaattcggtacgaagctgtgtgttctcttcttccatagcccttttc 4547311  T
Q  267 tttcttctgtattctctg 284  Q
    ||||||||||||||||||    
T  4547312 tttcttctgtattctctg 4547329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 167 - 284
Target Start/End: Original strand, 26779056 - 26779173
Alignment:
Q  167 caacagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttc 266  Q
    ||||||||||||||| | |||||  || ||  ||||||| ||||| | ||| || || |||||||| |||||    ||||||||||||||||||||||||    
T  26779056 caacagagcagtcatagcatcatgagctttggccaattcctcccttagagatgccaattcggtacgaagctgtgtgttctcttcttccatagcccttttc 26779155  T
Q  267 tttcttctgtattctctg 284  Q
    ||||||||||||||||||    
T  26779156 tttcttctgtattctctg 26779173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 167 - 284
Target Start/End: Complemental strand, 27006480 - 27006363
Alignment:
Q  167 caacagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttc 266  Q
    ||||||||||||||| | |||||  || ||  ||||||| ||||| | ||| || || |||||||| |||||    ||||||||||||||||||||||||    
T  27006480 caacagagcagtcatagcatcatgagctttggccaattcctcccttagagatgccaattcggtacgaagctgtgtgttctcttcttccatagcccttttc 27006381  T
Q  267 tttcttctgtattctctg 284  Q
    ||||||||||||||||||    
T  27006380 tttcttctgtattctctg 27006363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 167 - 284
Target Start/End: Complemental strand, 27483885 - 27483768
Alignment:
Q  167 caacagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttc 266  Q
    ||||||||||||||| | |||||  || ||  ||||||| ||||| | ||| || || |||||||| |||||    ||||||||||||||||||||||||    
T  27483885 caacagagcagtcatagcatcatgagctttggccaattcctcccttagagatgccaattcggtacgaagctgtgtgttctcttcttccatagcccttttc 27483786  T
Q  267 tttcttctgtattctctg 284  Q
    ||||||||||||||||||    
T  27483785 tttcttctgtattctctg 27483768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 167 - 284
Target Start/End: Complemental strand, 28206210 - 28206093
Alignment:
Q  167 caacagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttc 266  Q
    ||||||||||||||| | |||||  || ||  ||||||| ||||| | ||| || || |||||||| |||||    ||||||||||||||||||||||||    
T  28206210 caacagagcagtcatagcatcatgagctttggccaattcctcccttagagatgccaattcggtacgaagctgtgtgttctcttcttccatagcccttttc 28206111  T
Q  267 tttcttctgtattctctg 284  Q
    ||||||||||||||||||    
T  28206110 tttcttctgtattctctg 28206093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 30 - 166
Target Start/End: Complemental strand, 17025526 - 17025390
Alignment:
Q  30 acattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttgat 129  Q
    ||||| ||||||||||| ||||||||||||| |||||||||||| || || ||| |||| || || || || |||||||||||  | |  ||||||||||    
T  17025526 acattattctcaaaagtcagctttccctgatcaatgagcttcttcacgatatacttcaaagcataacacccctcgacatcatgtcctaaggcaccttgat 17025427  T
Q  130 ggaaatcacacttgaggtcagaacggaacctgggagg 166  Q
    | |||||||| || || ||||| |||||||| |||||    
T  17025426 gaaaatcacatttaagatcagagcggaaccttggagg 17025390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 173 - 256
Target Start/End: Complemental strand, 26998816 - 26998733
Alignment:
Q  173 agcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccat 256  Q
    ||||||||||  |||||| || ||| ||||||||||||| | ||  ||||||||||||||||||||| ||||||||||||||||    
T  26998816 agcagtcatgacatcattagctttagccaattcttcccttagagtggctaactcggtacggagctgagcattctcttcttccat 26998733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #68
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 225 - 284
Target Start/End: Complemental strand, 27043099 - 27043040
Alignment:
Q  225 tcggtacggagctgaacattctcttcttccatagcccttttctttcttctgtattctctg 284  Q
    ||||||||||||||    ||||||||||||||||||||||||||||||||||||||||||    
T  27043099 tcggtacggagctgtgtgttctcttcttccatagcccttttctttcttctgtattctctg 27043040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #69
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 28 - 170
Target Start/End: Complemental strand, 3696332 - 3696190
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttg 127  Q
    ||||||| ||||||||||| ||||| || |||| |||||||||||| || || ||| |||| || || || || |||||||||||| | |  ||||||||    
T  3696332 ggacattattctcaaaagtcagcttcccttgatcaatgagcttcttcacgatatacttcaaagcataacacccctcgacatcatgacctaaggcaccttg 3696233  T
Q  128 atggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    ||| ||||| || ||||| ||||| | |||||| |||||||||    
T  3696232 atgaaaatcgcatttgagatcagacctgaaccttggaggcaac 3696190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #70
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 170 - 256
Target Start/End: Original strand, 13300400 - 13300486
Alignment:
Q  170 cagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccat 256  Q
    |||||| ||||||  |||||| || ||| ||||||||||||| | ||  ||||||||||||||||||||| ||||||||||||||||    
T  13300400 cagagcggtcatgacatcattagctttagccaattcttcccttagagtggctaactcggtacggagctgagcattctcttcttccat 13300486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #71
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 170 - 256
Target Start/End: Original strand, 22936309 - 22936395
Alignment:
Q  170 cagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccat 256  Q
    |||||||||||||  |||||| || ||| ||||||||||||| | ||  ||||||||||||||||||||| |||| |||||||||||    
T  22936309 cagagcagtcatgacatcattagctttagccaattcttcccttagagtggctaactcggtacggagctgagcattttcttcttccat 22936395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #72
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 170 - 256
Target Start/End: Original strand, 23858754 - 23858840
Alignment:
Q  170 cagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccat 256  Q
    |||||||||||||  |||||| || ||| ||||||||||||| | ||  ||||||||||||||||||||| |||| |||||||||||    
T  23858754 cagagcagtcatgacatcattagctttagccaattcttcccttagagtggctaactcggtacggagctgagcattttcttcttccat 23858840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #73
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 170 - 256
Target Start/End: Original strand, 24306067 - 24306153
Alignment:
Q  170 cagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccat 256  Q
    |||||| ||||||  |||||| |||||  ||||||||||||| | ||  ||||||||||||||||||||| ||||||||||||||||    
T  24306067 cagagcggtcatgacatcattagccttggccaattcttcccttagagtggctaactcggtacggagctgagcattctcttcttccat 24306153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #74
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 170 - 256
Target Start/End: Complemental strand, 26987751 - 26987665
Alignment:
Q  170 cagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccat 256  Q
    |||||||||||||  |||||| || ||| ||||||||||||| | ||  ||||||||||||||||||| | ||||||||||||||||    
T  26987751 cagagcagtcatgacatcattagctttagccaattcttcccttagagtggctaactcggtacggagctaagcattctcttcttccat 26987665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #75
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 225 - 283
Target Start/End: Complemental strand, 29548188 - 29548130
Alignment:
Q  225 tcggtacggagctgaacattctcttcttccatagcccttttctttcttctgtattctct 283  Q
    ||||||||||||||    |||||||||||||||||||||||||||||||||||||||||    
T  29548188 tcggtacggagctgcgtgttctcttcttccatagcccttttctttcttctgtattctct 29548130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #76
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 28 - 170
Target Start/End: Complemental strand, 29573264 - 29573122
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttg 127  Q
    ||||||| ||||||||||| ||||| || ||||  ||||||||||| || || ||| |||| || || || || |||||||||||| | || ||||||||    
T  29573264 ggacattattctcaaaagtcagcttcccttgatcgatgagcttcttcacgatatacttcaaagcataacacccctcgacatcatgacctagggcaccttg 29573165  T
Q  128 atggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    ||| || ||||| ||||| ||||| | |||||| |||||||||    
T  29573164 atgaaagtcacatttgagatcagacctgaaccttggaggcaac 29573122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #77
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 167 - 284
Target Start/End: Complemental strand, 16672895 - 16672778
Alignment:
Q  167 caacagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttc 266  Q
    ||||||||||||||| | |||||  || ||  ||||||| ||| | ||||| || || ||||||||||| ||    ||||||||||||||||||||||||    
T  16672895 caacagagcagtcatagcatcatgagctttggccaattcctcctttaaagatgccaattcggtacggagttgtgtgttctcttcttccatagcccttttc 16672796  T
Q  267 tttcttctgtattctctg 284  Q
    || |||||||||||||||    
T  16672795 ttccttctgtattctctg 16672778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #78
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 167 - 284
Target Start/End: Complemental strand, 17024030 - 17023913
Alignment:
Q  167 caacagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttc 266  Q
    ||||||||||||||| | |||||  || ||  ||||||| ||||| | ||| || || | ||||||||||||    || |||||||||||||||||||||    
T  17024030 caacagagcagtcatagcatcatgagctttggccaattcctcccttagagatgccaatttggtacggagctgtgtgttttcttcttccatagcccttttc 17023931  T
Q  267 tttcttctgtattctctg 284  Q
    ||||||||||||||||||    
T  17023930 tttcttctgtattctctg 17023913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #79
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 199 - 284
Target Start/End: Complemental strand, 29500142 - 29500057
Alignment:
Q  199 ccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttctttcttctgtattctctg 284  Q
    ||||||| ||| | ||||| || || ||||||||||| ||  | |||||||||||||||||||||||||||||||| |||||||||    
T  29500142 ccaattcctcctttaaagatgccaattcggtacggagttgcgcgttctcttcttccatagcccttttctttcttctatattctctg 29500057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #80
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 63 - 166
Target Start/End: Complemental strand, 20160917 - 20160814
Alignment:
Q  63 atgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttgatggaaatcacacttgaggtcagaacggaacctgg 162  Q
    |||||||| || ||||| ||| |||| || ||||| ||||| ||||||||| | |  |||||||| ||||||||||||||||| || |||| ||||||||    
T  20160917 atgagctttttcacaatatacttcaaagcatagcacccttccacatcatgacctaaggcaccttggtggaaatcacacttgagatcggaacagaacctgg 20160818  T
Q  163 gagg 166  Q
    ||||    
T  20160817 gagg 20160814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #81
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 63 - 166
Target Start/End: Original strand, 22171914 - 22172017
Alignment:
Q  63 atgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttgatggaaatcacacttgaggtcagaacggaacctgg 162  Q
    |||||||| || ||||| ||| |||| || ||||| ||||| ||||||||| | |  |||||||| ||||||||||||||||| || |||| ||||||||    
T  22171914 atgagctttttcacaatatacttcaaagcatagcacccttccacatcatgacctaaggcaccttggtggaaatcacacttgagatcggaacagaacctgg 22172013  T
Q  163 gagg 166  Q
    ||||    
T  22172014 gagg 22172017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #82
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 28 - 170
Target Start/End: Original strand, 16943972 - 16944114
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttg 127  Q
    ||||||| ||||||||||| ||||| || ||||  ||||||||||| || || ||| |||| || || || || ||||| |||||| |||  ||||||||    
T  16943972 ggacattattctcaaaagtcagcttcccttgatcgatgagcttcttcacgatatacttcaaagcataacacccctcgacgtcatgacccaaggcaccttg 16944071  T
Q  128 atggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    ||| || ||||| ||||| ||||| | |||||| |||||||||    
T  16944072 atgaaagtcacatttgagatcagacctgaaccttggaggcaac 16944114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #83
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 28 - 170
Target Start/End: Original strand, 26777560 - 26777702
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttg 127  Q
    ||||||| ||||||||||| ||||| || |||| |||||| ||||| || || ||| |||| || || || || |||||||||||| | |  ||||||||    
T  26777560 ggacattattctcaaaagtcagcttcccttgatcaatgagtttcttcacgatatacttcaaagcataacacccctcgacatcatgacctaaggcaccttg 26777659  T
Q  128 atggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    ||| || ||||| ||||| ||||| | |||||| |||||||||    
T  26777660 atgaaagtcacatttgagatcagacctgaaccttggaggcaac 26777702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #84
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 243 - 284
Target Start/End: Complemental strand, 4756453 - 4756412
Alignment:
Q  243 ttctcttcttccatagcccttttctttcttctgtattctctg 284  Q
    ||||||||||||||||||||||||||||||||||| ||||||    
T  4756453 ttctcttcttccatagcccttttctttcttctgtactctctg 4756412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #85
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 243 - 284
Target Start/End: Complemental strand, 4771689 - 4771648
Alignment:
Q  243 ttctcttcttccatagcccttttctttcttctgtattctctg 284  Q
    ||||||||||||||||||||||||||||||||||| ||||||    
T  4771689 ttctcttcttccatagcccttttctttcttctgtactctctg 4771648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #86
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 170 - 259
Target Start/End: Original strand, 27278906 - 27278995
Alignment:
Q  170 cagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagc 259  Q
    |||||||||||||||||||| ||||||| |||  |||||||| | || ||| |||||||| || ||||||   |||||||||||||||||    
T  27278906 cagagcagtcatggtatcatgggccttagccagctcttcccttagagtagccaactcggtgcgaagctgagtgttctcttcttccatagc 27278995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #87
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 170 - 259
Target Start/End: Original strand, 27303797 - 27303886
Alignment:
Q  170 cagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagc 259  Q
    |||||||||||||||||||| ||||||| |||  |||||||| | || ||| |||||||| || ||||||   |||||||||||||||||    
T  27303797 cagagcagtcatggtatcatgggccttagccagctcttcccttagagtagccaactcggtgcgaagctgagtgttctcttcttccatagc 27303886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #88
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 30 - 170
Target Start/End: Complemental strand, 28207703 - 28207563
Alignment:
Q  30 acattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttgat 129  Q
    ||||| ||||||||||| ||||| || |||| |||||| ||||| ||||| ||| |||| || || || || |||||||||||  | |  ||||||||||    
T  28207703 acattattctcaaaagtcagcttcccttgatcaatgagtttcttcacaatatacttcaaagcataacacccctcgacatcatgtcctaaggcaccttgat 28207604  T
Q  130 ggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    | || ||||| ||||| ||||| | |||||| |||||||||    
T  28207603 gaaagtcacatttgagatcagacctgaaccttggaggcaac 28207563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #89
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 30 - 170
Target Start/End: Complemental strand, 29501664 - 29501524
Alignment:
Q  30 acattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttgat 129  Q
    ||||| ||||||||||| ||||| || |||| |||||| ||||| || || ||| |||| || || || || |||||||||||| | |  ||||||||||    
T  29501664 acattattctcaaaagtcagcttcccttgatcaatgagtttcttcacgatatacttcaaagcataacacccctcgacatcatgacctaaggcaccttgat 29501565  T
Q  130 ggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    | || ||||| ||||| ||||| | |||||| |||||||||    
T  29501564 gaaagtcacatttgagatcagacctgaaccttggaggcaac 29501524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #90
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 168 - 258
Target Start/End: Complemental strand, 20159486 - 20159396
Alignment:
Q  168 aacagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatag 258  Q
    |||||||||| | ||||||||| ||||||| |||| |||||  ||| ||| || || ||||  ||||||||| ||||||||||||||||||    
T  20159486 aacagagcagccgtggtatcatgggccttagccaagtcttctttcagagaggccaattcggcgcggagctgagcattctcttcttccatag 20159396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #91
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 168 - 258
Target Start/End: Original strand, 22173345 - 22173435
Alignment:
Q  168 aacagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatag 258  Q
    |||||||||| | ||||||||| ||||||| |||| |||||  ||| ||| || || ||||  ||||||||| ||||||||||||||||||    
T  22173345 aacagagcagccgtggtatcatgggccttagccaagtcttctttcagagaggccaattcggcgcggagctgagcattctcttcttccatag 22173435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #92
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 30 - 170
Target Start/End: Complemental strand, 27044637 - 27044496
Alignment:
Q  30 acattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagc-atccttcgacatcatgatccagagcaccttga 128  Q
    ||||| ||||||||||| ||||| || |||| |||||| ||||| || || ||| |||| || || | | || |||||||||||| | |  |||||||||    
T  27044637 acattattctcaaaagtcagcttcccttgatcaatgagtttcttcacgatatacttcaaagcataaccacccctcgacatcatgacctaaggcaccttga 27044538  T
Q  129 tggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    || |||||||| ||||| ||||| | |||||| |||||||||    
T  27044537 tgaaaatcacatttgagatcagacctgaaccttggaggcaac 27044496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #93
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 167 - 284
Target Start/End: Original strand, 27361438 - 27361555
Alignment:
Q  167 caacagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttc 266  Q
    ||||||||||||||| | |||||  || ||  ||||||| ||||| | ||| || || |||||||| |||||    |||||||||||||||||| |||||    
T  27361438 caacagagcagtcatagcatcatgagctttggccaattcctcccttagagatgccaattcggtacgaagctgtgtgttctcttcttccatagcctttttc 27361537  T
Q  267 tttcttctgtattctctg 284  Q
     |||||||||| ||||||    
T  27361538 cttcttctgtactctctg 27361555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #94
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 167 - 284
Target Start/End: Original strand, 27451781 - 27451898
Alignment:
Q  167 caacagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttc 266  Q
    ||||||||||||||| | |||||  || ||  ||||||| ||||| | ||| || || |||||||| |||||    |||||||||||||||||| |||||    
T  27451781 caacagagcagtcatagcatcatgagctttggccaattcctcccttagagatgccaattcggtacgaagctgtgtgttctcttcttccatagcctttttc 27451880  T
Q  267 tttcttctgtattctctg 284  Q
     |||||||||| ||||||    
T  27451881 cttcttctgtactctctg 27451898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #95
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 170
Target Start/End: Complemental strand, 27485378 - 27485238
Alignment:
Q  30 acattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttgat 129  Q
    ||||| ||||||||||| ||||| || |||| |||||| ||||| || || ||| |||| || || || || |||||||||||  | |  ||||||||||    
T  27485378 acattattctcaaaagtcagcttcccttgatcaatgagtttcttcacgatatacttcaaagcataacacccctcgacatcatgtcctaaggcaccttgat 27485279  T
Q  130 ggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    | || ||||| ||||| ||||| | |||||| |||||||||    
T  27485278 gaaagtcacatttgagatcagacctgaaccttggaggcaac 27485238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0415 (Bit Score: 107; Significance: 1e-53; HSPs: 2)
Name: scaffold0415
Description:

Target: scaffold0415; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 28 - 170
Target Start/End: Original strand, 1920 - 2061
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttg 127  Q
    |||||||||||||||||||||  ||||| |||| |||||||||||| ||||||||| |||| |||||||||||||||||||||||| |||||||||||||    
T  1920 ggacattgttctcaaaagttaa-tttccttgatcaatgagcttcttcacaatgtacttcaaagcgtagcatccttcgacatcatgacccagagcaccttg 2018  T
Q  128 atggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  2019 atggaaatcacacttgaggtcagaacggaacctgggaggcaac 2061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0415; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 28 - 170
Target Start/End: Complemental strand, 6268 - 6124
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctc-aacgcgtagcatccttcgacatcatgatccagagcacctt 126  Q
    ||||||| ||||||||||| ||||||||||||| |||||||||||| || || ||| || || || || || || |||||||||||| | |  |||||||    
T  6268 ggacattattctcaaaagtcagctttccctgatcaatgagcttcttcacgatatacttcaaaagcataacacccctcgacatcatgacctaaggcacctt 6169  T
Q  127 gatg-gaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    ||||  |||||||| ||||| ||||| | |||||| |||||||||    
T  6168 gatgaaaaatcacatttgagatcagacctgaaccttggaggcaac 6124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 107; Significance: 1e-53; HSPs: 4)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 28 - 170
Target Start/End: Complemental strand, 20641 - 20500
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttg 127  Q
    |||||||||||||||||||||  ||||| |||| |||||||||||| ||||||||| |||| |||||||||||||||||||||||| |||||||||||||    
T  20641 ggacattgttctcaaaagttaa-tttccttgatcaatgagcttcttcacaatgtacttcaaagcgtagcatccttcgacatcatgacccagagcaccttg 20543  T
Q  128 atggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  20542 atggaaatcacacttgaggtcagaacggaacctgggaggcaac 20500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 170 - 257
Target Start/End: Complemental strand, 19161 - 19073
Alignment:
Q  170 cagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaac-attctcttcttccata 257  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||| ||||||| | ||| ||||||||||||    
T  19161 cagagcagtcatggtatcattggctttagccaattcttccctcaaagaagctaactcggtacagagctgagctattttcttcttccata 19073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #3
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 28 - 170
Target Start/End: Complemental strand, 30706 - 30564
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttg 127  Q
    ||||||| ||||||||||| ||||||||||||| |||||||||||| || || ||| |||| || || || || |||||||||||| | |  ||||||||    
T  30706 ggacattattctcaaaagtcagctttccctgatcaatgagcttcttcacgatatacttcaaagcataacacccctcgacatcatgacctaaggcaccttg 30607  T
Q  128 atggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    ||| || ||||| || || ||||| | |||||| |||||||||    
T  30606 atgaaagtcacatttaagatcagacctgaaccttggaggcaac 30564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 170 - 256
Target Start/End: Complemental strand, 29203 - 29117
Alignment:
Q  170 cagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccat 256  Q
    |||||||||||||  ||| || || ||| ||||||||||||| | ||  ||||||||||||||||||||| | ||||||||||||||    
T  29203 cagagcagtcatgacatcgttagctttagccaattcttcccttagagtggctaactcggtacggagctgagcgttctcttcttccat 29117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 107; Significance: 1e-53; HSPs: 70)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 28 - 170
Target Start/End: Complemental strand, 16041578 - 16041436
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttg 127  Q
    ||||||||||||||||||||| ||||||||||| ||||||||| || ||||||||| |||| |||||||||||||| ||||||||| |||||||||||||    
T  16041578 ggacattgttctcaaaagttaactttccctgatcaatgagctttttcacaatgtacttcaaagcgtagcatccttctacatcatgacccagagcaccttg 16041479  T
Q  128 atggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    ||||||||||||||| |||||||||||||||||||||||||||    
T  16041478 atggaaatcacactttaggtcagaacggaacctgggaggcaac 16041436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 36 - 169
Target Start/End: Original strand, 16449894 - 16450027
Alignment:
Q  36 ttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttgatggaaat 135  Q
    ||||||||||||| ||||||||||| |||||||||||| ||||||||| |||| |||||||||||||||||||||||| |||||||||||||||||||||    
T  16449894 ttctcaaaagttaactttccctgatcaatgagcttcttcacaatgtacttcaaagcgtagcatccttcgacatcatgacccagagcaccttgatggaaat 16449993  T
Q  136 cacacttgaggtcagaacggaacctgggaggcaa 169  Q
    ||||||||||||||||||| ||||||||||||||    
T  16449994 cacacttgaggtcagaacgaaacctgggaggcaa 16450027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 28 - 166
Target Start/End: Original strand, 2108893 - 2109031
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttg 127  Q
    |||| |||||||||||||| | |||||| || | |||||||||||| ||||||||  |||| || ||||||||||||||||||||| |||||||||||||    
T  2108893 ggacgttgttctcaaaagtcaactttccttggttaatgagcttcttcacaatgtatttcaaagcatagcatccttcgacatcatgacccagagcaccttg 2108992  T
Q  128 atggaaatcacacttgaggtcagaacggaacctgggagg 166  Q
    |||||||||||| ||||||||||| ||||||||||||||    
T  2108993 atggaaatcacatttgaggtcagaccggaacctgggagg 2109031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 28 - 166
Target Start/End: Complemental strand, 26484949 - 26484811
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttg 127  Q
    |||| |||||||||||||| | |||||| || | |||||||||||| ||||||||  |||| || ||||||||||||||||||||| |||||||||||||    
T  26484949 ggacgttgttctcaaaagtcaactttccttggttaatgagcttcttcacaatgtatttcaaagcatagcatccttcgacatcatgacccagagcaccttg 26484850  T
Q  128 atggaaatcacacttgaggtcagaacggaacctgggagg 166  Q
    |||||||||||| ||||||||||| ||||||||||||||    
T  26484849 atggaaatcacatttgaggtcagaccggaacctgggagg 26484811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 63 - 167
Target Start/End: Original strand, 31088387 - 31088491
Alignment:
Q  63 atgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttgatggaaatcacacttgaggtcagaacggaacctgg 162  Q
    ||||| || |||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| ||||||||| |||    
T  31088387 atgagtttttttacaatgtacctcaacgcgtagcatccttcgacatcatgacccatagcaccttgatggaaatcacacttgaggtccgaacggaacttgg 31088486  T
Q  163 gaggc 167  Q
    |||||    
T  31088487 gaggc 31088491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 63 - 167
Target Start/End: Complemental strand, 45733680 - 45733576
Alignment:
Q  63 atgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttgatggaaatcacacttgaggtcagaacggaacctgg 162  Q
    ||||| || |||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| ||||||||| |||    
T  45733680 atgagtttttttacaatgtacctcaacgcgtagcatccttcgacatcatgacccatagcaccttgatggaaatcacacttgaggtccgaacggaacttgg 45733581  T
Q  163 gaggc 167  Q
    |||||    
T  45733580 gaggc 45733576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 28 - 166
Target Start/End: Complemental strand, 2775614 - 2775476
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttg 127  Q
    |||| |||||||||||||| | |||||| || | |||||||||||| |||||||   |||| || ||||||||||||||||||||| |||||||||||||    
T  2775614 ggacgttgttctcaaaagtcaactttccttggttaatgagcttcttcacaatgtgtttcaaagcatagcatccttcgacatcatgacccagagcaccttg 2775515  T
Q  128 atggaaatcacacttgaggtcagaacggaacctgggagg 166  Q
    |||||||||||| ||||||||||| ||||||||||||||    
T  2775514 atggaaatcacatttgaggtcagaccggaacctgggagg 2775476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 28 - 166
Target Start/End: Original strand, 39210911 - 39211049
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttg 127  Q
    |||| |||||||||||||| | |||||| || | |||||||||||| ||||||||  |||| || ||||||||||||||||||||| ||| |||||||||    
T  39210911 ggacgttgttctcaaaagtcaactttccttggttaatgagcttcttcacaatgtatttcaaagcatagcatccttcgacatcatgacccaaagcaccttg 39211010  T
Q  128 atggaaatcacacttgaggtcagaacggaacctgggagg 166  Q
    |||||||||||| ||||||||||| ||||||||||||||    
T  39211011 atggaaatcacatttgaggtcagaccggaacctgggagg 39211049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 170 - 259
Target Start/End: Original strand, 16451387 - 16451476
Alignment:
Q  170 cagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagc 259  Q
    |||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||| ||||| ||||||||||||||    
T  16451387 cagagcagtcatggtatcattggccttagccaattcttccctcagagaagctaactcggtacggagctgcacattttcttcttccatagc 16451476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 170 - 284
Target Start/End: Original strand, 39211216 - 39211330
Alignment:
Q  170 cagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttcttt 269  Q
    ||||||||||||||| |||||||||||| ||||||||||||||| ||||| ||| ||||||||||||||| | |||||||||||||||||| ||||| ||    
T  39211216 cagagcagtcatggtgtcattggccttagccaattcttccctcagagaagttaattcggtacggagctgagcgttctcttcttccatagcctttttcctt 39211315  T
Q  270 cttctgtattctctg 284  Q
    ||| |||| ||||||    
T  39211316 cttatgtactctctg 39211330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 170 - 259
Target Start/End: Original strand, 2109198 - 2109287
Alignment:
Q  170 cagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagc 259  Q
    ||||||||||||||| |||||||||||| ||||||||||||||| ||||| |||||||||||||||||||||||| ||||||||||||||    
T  2109198 cagagcagtcatggtgtcattggccttagccaattcttccctcagagaagttaactcggtacggagctgaacattttcttcttccatagc 2109287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 170 - 259
Target Start/End: Complemental strand, 16040077 - 16039988
Alignment:
Q  170 cagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagc 259  Q
    ||||||||||||||| |||||||||||| ||||||||||||||| ||||||||||||||||||||||||| |||| ||||||||||||||    
T  16040077 cagagcagtcatggtgtcattggccttagccaattcttccctcagagaagctaactcggtacggagctgagcattttcttcttccatagc 16039988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 28 - 170
Target Start/End: Complemental strand, 5128247 - 5128105
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttg 127  Q
    ||||||| ||||||||||| |||||||| |||| |||||||||||| || || ||| |||| ||||||||||| |||||||||||| | || ||||||||    
T  5128247 ggacattattctcaaaagtcagctttccttgatcaatgagcttcttcacgatatacttcaaagcgtagcatccctcgacatcatgacctagggcaccttg 5128148  T
Q  128 atggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    ||| |||||||| ||||| ||||| | |||||| |||||||||    
T  5128147 atgaaaatcacatttgagatcagacctgaaccttggaggcaac 5128105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 170 - 259
Target Start/End: Original strand, 16519807 - 16519896
Alignment:
Q  170 cagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagc 259  Q
    |||||||||||||||||||||||||||| ||||||||||||| | || |||||||||||||||||||||| |||| ||||||||||||||    
T  16519807 cagagcagtcatggtatcattggccttagccaattcttcccttagagtagctaactcggtacggagctgagcattttcttcttccatagc 16519896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 28 - 148
Target Start/End: Complemental strand, 4200802 - 4200682
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttg 127  Q
    |||| |||||||||||||| | |||||| || | |||||||||||| |||||||   |||| || ||||||||||||||||||||| |||||||||||||    
T  4200802 ggacgttgttctcaaaagtcaactttccttggttaatgagcttcttcacaatgtgtttcaaagcatagcatccttcgacatcatgacccagagcaccttg 4200703  T
Q  128 atggaaatcacacttgaggtc 148  Q
    |||||||||||| ||||||||    
T  4200702 atggaaatcacatttgaggtc 4200682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 170 - 256
Target Start/End: Complemental strand, 18540749 - 18540663
Alignment:
Q  170 cagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccat 256  Q
    |||||||||||||||||||||||||||| ||||||||||||||| ||||||||| ||||||||||||||| |||| || ||||||||    
T  18540749 cagagcagtcatggtatcattggccttagccaattcttccctcagagaagctaattcggtacggagctgagcattttcctcttccat 18540663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 170 - 256
Target Start/End: Complemental strand, 26484644 - 26484558
Alignment:
Q  170 cagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccat 256  Q
    |||||||||||||||||||||||||||| ||||||||||||||| ||||||||| ||||||||||||||| |||| || ||||||||    
T  26484644 cagagcagtcatggtatcattggccttagccaattcttccctcagagaagctaattcggtacggagctgagcattttcctcttccat 26484558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 171 - 259
Target Start/End: Original strand, 16504772 - 16504860
Alignment:
Q  171 agagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagc 259  Q
    |||| |||||||||||||||||||||| ||||||||||||| | || |||||||||||||||||||||| |||| ||||||||||||||    
T  16504772 agagtagtcatggtatcattggccttagccaattcttcccttagagtagctaactcggtacggagctgagcattttcttcttccatagc 16504860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 28 - 170
Target Start/End: Complemental strand, 2154828 - 2154686
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttg 127  Q
    ||||||| ||||||||||| |||||||| |||| |||||||||||| || || ||| |||| ||||||||||| |||||||||||| | || || |||||    
T  2154828 ggacattattctcaaaagtcagctttccttgatcaatgagcttcttcacgatatacttcaaagcgtagcatccctcgacatcatgacctagggcgccttg 2154729  T
Q  128 atggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    ||| |||||||| ||||| || || | |||||| |||||||||    
T  2154728 atgaaaatcacatttgagatcggacctgaaccttggaggcaac 2154686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 170 - 256
Target Start/End: Complemental strand, 2775309 - 2775223
Alignment:
Q  170 cagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccat 256  Q
    |||||||||||||||||||||||||||| | ||||||||||||| ||||||||| ||||||||||||||| |||| || ||||||||    
T  2775309 cagagcagtcatggtatcattggccttagctaattcttccctcatagaagctaattcggtacggagctgagcattttcctcttccat 2775223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 170 - 284
Target Start/End: Complemental strand, 5126743 - 5126629
Alignment:
Q  170 cagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttcttt 269  Q
    |||||||||||||  |||||| || ||| ||||||| ||||| | ||  ||||||||||||||||||||| | |||||||||||||||||| ||||| ||    
T  5126743 cagagcagtcatgacatcattagctttagccaattcctcccttagagtggctaactcggtacggagctgagcgttctcttcttccatagcctttttcctt 5126644  T
Q  270 cttctgtattctctg 284  Q
    |||||||||||||||    
T  5126643 cttctgtattctctg 5126629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 170 - 284
Target Start/End: Original strand, 31089178 - 31089292
Alignment:
Q  170 cagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttcttt 269  Q
    |||||||||||||  |||||| || ||| ||||||| ||||| | ||  ||||||||||||||||||||| | |||||||||||||||||| ||||| ||    
T  31089178 cagagcagtcatgacatcattagctttagccaattcctcccttagagtggctaactcggtacggagctgagcgttctcttcttccatagcctttttcctt 31089277  T
Q  270 cttctgtattctctg 284  Q
    |||||||||||||||    
T  31089278 cttctgtattctctg 31089292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 28 - 170
Target Start/End: Original strand, 5147228 - 5147370
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttg 127  Q
    ||||||| ||||||||||| ||||||||||||| |||||||||||| || || ||| |||| || || || || |||||||||||| | |  ||||||||    
T  5147228 ggacattattctcaaaagtcagctttccctgatcaatgagcttcttcacgatatacttcaaagcataacacccctcgacatcatgacctaaggcaccttg 5147327  T
Q  128 atggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    ||| |||||||| ||||| ||||| | |||||| |||||||||    
T  5147328 atgaaaatcacatttgagatcagacctgaaccttggaggcaac 5147370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 28 - 170
Target Start/End: Original strand, 10916756 - 10916898
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttg 127  Q
    ||||||| ||||||||||| |||||||| |||| |||||||||||| || || ||| |||| || ||||| || |||||||||||| |||| || |||||    
T  10916756 ggacattattctcaaaagtcagctttccttgatcaatgagcttcttcacgatatacttcaaagcatagcacccctcgacatcatgacccagggcgccttg 10916855  T
Q  128 atggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    ||| |||||||| ||||| || || | |||||| |||||||||    
T  10916856 atgaaaatcacatttgagatcggacctgaaccttggaggcaac 10916898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 28 - 170
Target Start/End: Original strand, 11424664 - 11424806
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttg 127  Q
    ||||||| ||||||||||| |||||||| |||| |||||||||||| || || ||| |||| || ||||| || |||||||||||| |||| || |||||    
T  11424664 ggacattattctcaaaagtcagctttccttgatcaatgagcttcttcacgatatacttcaaagcatagcacccctcgacatcatgacccagggcgccttg 11424763  T
Q  128 atggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    ||| |||||||| ||||| || || | |||||| |||||||||    
T  11424764 atgaaaatcacatttgagatcggacctgaaccttggaggcaac 11424806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 170 - 284
Target Start/End: Complemental strand, 11440311 - 11440197
Alignment:
Q  170 cagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttcttt 269  Q
    |||||||||||||   ||||| || ||| ||||||||||||| | ||  ||||| ||||| || |||||| | |||||||||||||||||||||||||||    
T  11440311 cagagcagtcatgacgtcattagctttagccaattcttcccttagagtggctaattcggtgcgaagctgagcgttctcttcttccatagcccttttcttt 11440212  T
Q  270 cttctgtattctctg 284  Q
    |||||||||||||||    
T  11440211 cttctgtattctctg 11440197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 28 - 170
Target Start/End: Original strand, 16503268 - 16503410
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttg 127  Q
    ||||||| ||||||||||| |||||||| |||| |||||||||||| || || ||| ||||  | ||||| || |||||||||||| |||| || |||||    
T  16503268 ggacattattctcaaaagtcagctttccttgatcaatgagcttcttcacgatatacttcaaaacatagcacccctcgacatcatgacccagggcgccttg 16503367  T
Q  128 atggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    |||||||||||| ||||| || || | |||||| |||||||||    
T  16503368 atggaaatcacatttgagatcggacctgaaccttggaggcaac 16503410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 28 - 170
Target Start/End: Complemental strand, 26435512 - 26435370
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttg 127  Q
    ||||||| ||||||||||| ||||||||||||| |||||||||||| || || ||| |||| || || || || |||||||||||| | |  ||||||||    
T  26435512 ggacattattctcaaaagtcagctttccctgatcaatgagcttcttcacgatatacttcaaagcataacacccctcgacatcatgacctaaggcaccttg 26435413  T
Q  128 atggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    ||| |||||||| ||||| ||||| | |||||| |||||||||    
T  26435412 atgaaaatcacatttgagatcagacctgaaccttggaggcaac 26435370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 170 - 284
Target Start/End: Complemental strand, 45732889 - 45732775
Alignment:
Q  170 cagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttcttt 269  Q
    |||||||||||||  |||||| || ||| ||||||| ||||| | ||  ||||||||||||||||||||| | |||||||||||||||||| ||||| ||    
T  45732889 cagagcagtcatgacatcattagctttagccaattcctcccttagagtggctaactcggtacggagctgagcgttctcttcttccatagcctttttcctt 45732790  T
Q  270 cttctgtattctctg 284  Q
    |||||||| ||||||    
T  45732789 cttctgtactctctg 45732775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 171 - 284
Target Start/End: Original strand, 4146516 - 4146629
Alignment:
Q  171 agagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttctttc 270  Q
    ||||||||||||   ||||| || ||| ||||||| ||| | | ||| ||||||||||| || |||||| | ||||||||||||||||||||||||||||    
T  4146516 agagcagtcatgacgtcattagctttagccaattcctcctttagagaggctaactcggtgcgaagctgagcgttctcttcttccatagcccttttctttc 4146615  T
Q  271 ttctgtattctctg 284  Q
    ||||||||||||||    
T  4146616 ttctgtattctctg 4146629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 171 - 284
Target Start/End: Complemental strand, 9617401 - 9617288
Alignment:
Q  171 agagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttctttc 270  Q
    ||||||||||||   ||||| || ||| ||||||| ||| | | ||| ||||||||||| || |||||| | ||||||||||||||||||||||||||||    
T  9617401 agagcagtcatgacgtcattagctttagccaattcctcctttagagaggctaactcggtgcgaagctgagcgttctcttcttccatagcccttttctttc 9617302  T
Q  271 ttctgtattctctg 284  Q
    ||||||||||||||    
T  9617301 ttctgtattctctg 9617288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 171 - 284
Target Start/End: Original strand, 24593934 - 24594047
Alignment:
Q  171 agagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttctttc 270  Q
    ||||||||||||   ||||| || ||| ||||||| ||| | | ||| ||||||||||| || |||||| | ||||||||||||||||||||||||||||    
T  24593934 agagcagtcatgacgtcattagctttagccaattcctcctttagagaggctaactcggtgcgaagctgagcgttctcttcttccatagcccttttctttc 24594033  T
Q  271 ttctgtattctctg 284  Q
    ||||||||||||||    
T  24594034 ttctgtattctctg 24594047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 171 - 284
Target Start/End: Original strand, 26276487 - 26276600
Alignment:
Q  171 agagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttctttc 270  Q
    ||||||||||||   ||||| || ||| ||||||| ||| | | ||| ||||||||||| || |||||| | ||||||||||||||||||||||||||||    
T  26276487 agagcagtcatgacgtcattagctttagccaattcctcctttagagaggctaactcggtgcgaagctgagcgttctcttcttccatagcccttttctttc 26276586  T
Q  271 ttctgtattctctg 284  Q
    ||||||||||||||    
T  26276587 ttctgtattctctg 26276600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 171 - 284
Target Start/End: Original strand, 26321262 - 26321375
Alignment:
Q  171 agagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttctttc 270  Q
    ||||||||||||   ||||| || ||| ||||||| ||| | | ||| ||||||||||| || |||||| | ||||||||||||||||||||||||||||    
T  26321262 agagcagtcatgacgtcattagctttagccaattcctcctttagagaggctaactcggtgcgaagctgagcgttctcttcttccatagcccttttctttc 26321361  T
Q  271 ttctgtattctctg 284  Q
    ||||||||||||||    
T  26321362 ttctgtattctctg 26321375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 167 - 284
Target Start/End: Original strand, 26539244 - 26539361
Alignment:
Q  167 caacagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttc 266  Q
    ||||||||||||||||| |||||  || ||  ||||||| ||||| ||||| || || ||||||||||| ||    ||||||||||||||||||||||||    
T  26539244 caacagagcagtcatggcatcatgagctttggccaattcctcccttaaagatgccaattcggtacggagttgcgtgttctcttcttccatagcccttttc 26539343  T
Q  267 tttcttctgtattctctg 284  Q
    ||||||||||||||||||    
T  26539344 tttcttctgtattctctg 26539361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 171 - 284
Target Start/End: Original strand, 26671307 - 26671420
Alignment:
Q  171 agagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttctttc 270  Q
    ||||||||||||   ||||| || ||| ||||||| ||| | | ||| ||||||||||| || |||||| | ||||||||||||||||||||||||||||    
T  26671307 agagcagtcatgacgtcattagctttagccaattcctcctttagagaggctaactcggtgcgaagctgagcgttctcttcttccatagcccttttctttc 26671406  T
Q  271 ttctgtattctctg 284  Q
    ||||||||||||||    
T  26671407 ttctgtattctctg 26671420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 171 - 284
Target Start/End: Complemental strand, 45386093 - 45385980
Alignment:
Q  171 agagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttctttc 270  Q
    ||||||||||||   ||||| || ||| ||||||| ||| | | ||| ||||||||||| || |||||| | ||||||||||||||||||||||||||||    
T  45386093 agagcagtcatgacgtcattagctttagccaattcctcctttagagaggctaactcggtgcgaagctgagcgttctcttcttccatagcccttttctttc 45385994  T
Q  271 ttctgtattctctg 284  Q
    ||||||||||||||    
T  45385993 ttctgtattctctg 45385980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 30 - 170
Target Start/End: Original strand, 31564280 - 31564420
Alignment:
Q  30 acattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttgat 129  Q
    ||||| ||||||||||| ||||||||||||| |||||||||||| || || ||| |||| || || || || |||||||||||| | | |||||||||||    
T  31564280 acattattctcaaaagtcagctttccctgatcaatgagcttcttcacgatatacttcaaagcataacacccctcgacatcatgacctaaagcaccttgat 31564379  T
Q  130 ggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    | || ||||| ||||| ||||| | |||||| |||||||||    
T  31564380 gaaagtcacatttgagatcagacctgaaccttggaggcaac 31564420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 170 - 284
Target Start/End: Complemental strand, 3444045 - 3443931
Alignment:
Q  170 cagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttcttt 269  Q
    |||||||||||||   ||||| || ||| ||||||| ||||| | ||  ||||| ||||| || |||||| | |||||||||||||||||||||||||||    
T  3444045 cagagcagtcatgacgtcattagctttagccaattcctcccttagagtggctaattcggtgcgaagctgagcgttctcttcttccatagcccttttcttt 3443946  T
Q  270 cttctgtattctctg 284  Q
    |||||||||||||||    
T  3443945 cttctgtattctctg 3443931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 28 - 170
Target Start/End: Original strand, 16518304 - 16518446
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttg 127  Q
    ||||||| ||||||||||| | |||||| |||| |||||||||||| || || ||| ||||  | ||||| || |||||||||||| |||| || |||||    
T  16518304 ggacattattctcaaaagtcaactttccttgatcaatgagcttcttcacgatatacttcaaaacatagcacccctcgacatcatgacccagggcgccttg 16518403  T
Q  128 atggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    |||||||||||| ||||| || || | |||||| |||||||||    
T  16518404 atggaaatcacatttgagatcggacctgaaccttggaggcaac 16518446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 171 - 284
Target Start/End: Original strand, 16737853 - 16737966
Alignment:
Q  171 agagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttctttc 270  Q
    ||||||||||||   ||||| || ||| ||||||| ||| | | ||| |||||||| || || |||||| | ||||||||||||||||||||||||||||    
T  16737853 agagcagtcatgacgtcattagctttagccaattcctcctttagagaggctaactcagtgcgaagctgagcgttctcttcttccatagcccttttctttc 16737952  T
Q  271 ttctgtattctctg 284  Q
    ||||||||||||||    
T  16737953 ttctgtattctctg 16737966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 171 - 284
Target Start/End: Original strand, 16752907 - 16753020
Alignment:
Q  171 agagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttctttc 270  Q
    ||||||||||||   ||||| || ||| ||||||| ||| | | ||| |||||||| || || |||||| | ||||||||||||||||||||||||||||    
T  16752907 agagcagtcatgacgtcattagctttagccaattcctcctttagagaggctaactcagtgcgaagctgagcgttctcttcttccatagcccttttctttc 16753006  T
Q  271 ttctgtattctctg 284  Q
    ||||||||||||||    
T  16753007 ttctgtattctctg 16753020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 171 - 284
Target Start/End: Complemental strand, 17522282 - 17522169
Alignment:
Q  171 agagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttctttc 270  Q
    ||||||||||||   ||||| || ||| ||||||| ||| | | ||| |||||||| || || |||||| | ||||||||||||||||||||||||||||    
T  17522282 agagcagtcatgacgtcattagctttagccaattcctcctttagagaggctaactcagtgcgaagctgagcgttctcttcttccatagcccttttctttc 17522183  T
Q  271 ttctgtattctctg 284  Q
    ||||||||||||||    
T  17522182 ttctgtattctctg 17522169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 171 - 284
Target Start/End: Original strand, 17530933 - 17531046
Alignment:
Q  171 agagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttctttc 270  Q
    ||||||||||||   ||||| || ||| ||||||| ||| | | ||| |||||||| || || |||||| | ||||||||||||||||||||||||||||    
T  17530933 agagcagtcatgacgtcattagctttagccaattcctcctttagagaggctaactcagtgcgaagctgagcgttctcttcttccatagcccttttctttc 17531032  T
Q  271 ttctgtattctctg 284  Q
    ||||||||||||||    
T  17531033 ttctgtattctctg 17531046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 167 - 284
Target Start/End: Original strand, 26487115 - 26487232
Alignment:
Q  167 caacagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttc 266  Q
    ||||||||||||||| | |||||  || ||  ||||||| ||||| ||||| || || |||||||| |||||    ||||||||||||||||||||||||    
T  26487115 caacagagcagtcatagcatcatgagctttggccaattcctcccttaaagatgccaattcggtacgaagctgcgtgttctcttcttccatagcccttttc 26487214  T
Q  267 tttcttctgtattctctg 284  Q
    ||||||||||||||||||    
T  26487215 tttcttctgtattctctg 26487232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 93 - 148
Target Start/End: Original strand, 26682953 - 26683008
Alignment:
Q  93 tagcatccttcgacatcatgatccagagcaccttgatggaaatcacacttgaggtc 148  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||    
T  26682953 tagcatccttcgacatcatgacccagagcaccttgatggaaatcacatttgaggtc 26683008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 170 - 256
Target Start/End: Complemental strand, 2153323 - 2153237
Alignment:
Q  170 cagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccat 256  Q
    |||||||||||||  |||||| || ||| ||||||||||||| | ||  ||||||||||||||||||||| ||||||||||||||||    
T  2153323 cagagcagtcatgacatcattagctttagccaattcttcccttagagtggctaactcggtacggagctgagcattctcttcttccat 2153237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 28 - 170
Target Start/End: Complemental strand, 3445561 - 3445419
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttg 127  Q
    ||||||| ||||||||||| ||||| || |||| |||||||||||| ||||| ||| |||| || || || || |||||||||||| | |  ||||||||    
T  3445561 ggacattattctcaaaagtcagcttcccttgatcaatgagcttcttcacaatatacttcaaagcataacacccctcgacatcatgacctaaggcaccttg 3445462  T
Q  128 atggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    ||| || ||||| ||||| ||||| | |||||| |||||||||    
T  3445461 atgaaagtcacatttgagatcagacctgaaccttggaggcaac 3445419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 170 - 256
Target Start/End: Original strand, 10918257 - 10918343
Alignment:
Q  170 cagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccat 256  Q
    |||||| |||||| ||||||| |||||| ||||||||||||| | ||  ||||||||||||||||||| | ||||||||||||||||    
T  10918257 cagagcggtcatgatatcattagccttagccaattcttcccttagagtggctaactcggtacggagctaagcattctcttcttccat 10918343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 28 - 170
Target Start/End: Original strand, 26274982 - 26275124
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttg 127  Q
    ||||||| ||||||||||| ||||| || ||||  ||||||||||| || || ||| |||| || || ||||| |||||||||||| | || ||||||||    
T  26274982 ggacattattctcaaaagtcagcttcccttgatcgatgagcttcttcacgatatacttcaaagcataacatccctcgacatcatgacctagggcaccttg 26275081  T
Q  128 atggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    ||| || ||||| ||||| ||||| | |||||| |||||||||    
T  26275082 atgaaagtcacatttgagatcagacctgaaccttggaggcaac 26275124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 167 - 284
Target Start/End: Original strand, 5148711 - 5148828
Alignment:
Q  167 caacagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttc 266  Q
    ||||||||||||||| | |||||  || ||  ||||||| ||| | ||||| || || ||||||||||||||    ||||||||||||||||||||||||    
T  5148711 caacagagcagtcatagcatcatgagctttggccaattcctcctttaaagatgccaattcggtacggagctgcgtgttctcttcttccatagcccttttc 5148810  T
Q  267 tttcttctgtattctctg 284  Q
     |||||||||||||||||    
T  5148811 cttcttctgtattctctg 5148828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 167 - 284
Target Start/End: Complemental strand, 26434029 - 26433912
Alignment:
Q  167 caacagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttc 266  Q
    ||||||||||||||| | |||||  || ||  ||||||| ||||| ||||| || || |||||||| |||||    ||||||||||||||||||||||||    
T  26434029 caacagagcagtcatagcatcatgagctttggccaattcctcccttaaagatgccaattcggtacgaagctgcgtgttctcttcttccatagcccttttc 26433930  T
Q  267 tttcttctgtattctctg 284  Q
    ||||||||||| ||||||    
T  26433929 tttcttctgtactctctg 26433912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 167 - 284
Target Start/End: Original strand, 31565770 - 31565887
Alignment:
Q  167 caacagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttc 266  Q
    ||||||||||||||| | |||||  || ||  |||| || ||||| ||||| || || |||||||| |||||    ||||||||||||||||||||||||    
T  31565770 caacagagcagtcatagcatcatgagctttggccaactcctcccttaaagatgccaattcggtacgaagctgtgtgttctcttcttccatagcccttttc 31565869  T
Q  267 tttcttctgtattctctg 284  Q
    ||||||||||||||||||    
T  31565870 tttcttctgtattctctg 31565887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 28 - 170
Target Start/End: Original strand, 4145011 - 4145153
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttg 127  Q
    ||||||| ||||||||||| ||||| || ||||  ||||||||||| || || ||| |||| || || || || |||||||||||| | || ||||||||    
T  4145011 ggacattattctcaaaagtcagcttcccttgatcgatgagcttcttcacgatatacttcaaagcataacacccctcgacatcatgacctagggcaccttg 4145110  T
Q  128 atggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    ||| || ||||| ||||| ||||| | |||||| |||||||||    
T  4145111 atgaaagtcacatttgagatcagacctgaaccttggaggcaac 4145153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 28 - 170
Target Start/End: Original strand, 26319757 - 26319899
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttg 127  Q
    ||||||| ||||||||||| ||||| || ||||  ||||||||||| || || ||| |||| || || || || |||||||||||| | || ||||||||    
T  26319757 ggacattattctcaaaagtcagcttcccttgatcgatgagcttcttcacgatatacttcaaagcataacacccctcgacatcatgacctagggcaccttg 26319856  T
Q  128 atggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    ||| || ||||| ||||| ||||| | |||||| |||||||||    
T  26319857 atgaaagtcacatttgagatcagacctgaaccttggaggcaac 26319899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 28 - 170
Target Start/End: Original strand, 26537758 - 26537900
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttg 127  Q
    ||||||| ||||||||||| ||||| || |||| |||||||||||| || || ||| |||| || || || || |||||||||||| | |  ||||||||    
T  26537758 ggacattattctcaaaagtcagcttcccttgatcaatgagcttcttcacgatatacttcaaagcataacacccctcgacatcatgacctaaggcaccttg 26537857  T
Q  128 atggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    ||| ||||| || ||||| ||||| | |||||| |||||||||    
T  26537858 atgaaaatcgcatttgagatcagacctgaaccttggaggcaac 26537900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 28 - 170
Target Start/End: Complemental strand, 11441827 - 11441685
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttg 127  Q
    ||||||| ||||||||||| ||||| || ||||  ||||||||||| || || ||| |||| || || || || |||||||||||| | |  ||||||||    
T  11441827 ggacattattctcaaaagtcagcttcccttgatcgatgagcttcttcacgatatacttcaaagcataacacccctcgacatcatgacctaaggcaccttg 11441728  T
Q  128 atggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    ||| || ||||| ||||| ||||| | |||||| |||||||||    
T  11441727 atgaaagtcacatttgagatcagacctgaaccttggaggcaac 11441685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 28 - 170
Target Start/End: Complemental strand, 45387598 - 45387456
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttg 127  Q
    ||||||| ||||||||||| ||||| || ||||  ||||||||||| || || ||| |||| || || || || |||||||||||| | || ||||||||    
T  45387598 ggacattattctcaaaagtcagcttcccttgatcgatgagcttcttcacgatatacttcaaagcataacacccctcgacatcatgacctagggcaccttg 45387499  T
Q  128 atggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    ||| || || || ||||| ||||| | |||||| |||||||||    
T  45387498 atgaaagtcgcatttgagatcagacctgaaccttggaggcaac 45387456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 167 - 284
Target Start/End: Complemental strand, 31123683 - 31123566
Alignment:
Q  167 caacagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttc 266  Q
    ||||||||||||||| | |||||  || ||  ||||||| ||||| | ||| || || |||||||| |||||    || |||||||||||||||||||||    
T  31123683 caacagagcagtcatagcatcatgagctttggccaattcctcccttagagatgccaattcggtacgaagctgtgtgttttcttcttccatagcccttttc 31123584  T
Q  267 tttcttctgtattctctg 284  Q
    ||||||||||| ||||||    
T  31123583 tttcttctgtactctctg 31123566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 30 - 166
Target Start/End: Original strand, 16736350 - 16736486
Alignment:
Q  30 acattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttgat 129  Q
    ||||| ||||||||||| ||||| || |||| |||||||||||| || || ||| |||| || || || || |||||||||||| | |  ||||| ||||    
T  16736350 acattattctcaaaagtcagcttcccttgatcaatgagcttcttcacgatatacttcaaagcataacacccctcgacatcatgacctaaggcaccctgat 16736449  T
Q  130 ggaaatcacacttgaggtcagaacggaacctgggagg 166  Q
    | |||||||| ||||| ||||| | |||||| |||||    
T  16736450 gaaaatcacatttgagatcagacctgaaccttggagg 16736486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 30 - 166
Target Start/End: Original strand, 16751404 - 16751540
Alignment:
Q  30 acattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttgat 129  Q
    ||||| ||||||||||| ||||| || |||| |||||||||||| || || ||| |||| || || || || |||||||||||| | |  ||||| ||||    
T  16751404 acattattctcaaaagtcagcttcccttgatcaatgagcttcttcacgatatacttcaaagcataacacccctcgacatcatgacctaaggcaccctgat 16751503  T
Q  130 ggaaatcacacttgaggtcagaacggaacctgggagg 166  Q
    | |||||||| ||||| ||||| | |||||| |||||    
T  16751504 gaaaatcacatttgagatcagacctgaaccttggagg 16751540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 30 - 166
Target Start/End: Complemental strand, 17523785 - 17523649
Alignment:
Q  30 acattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttgat 129  Q
    ||||| ||||||||||| ||||| || |||| |||||||||||| || || ||| |||| || || || || |||||||||||| | |  ||||| ||||    
T  17523785 acattattctcaaaagtcagcttcccttgatcaatgagcttcttcacgatatacttcaaagcataacacccctcgacatcatgacctaaggcaccctgat 17523686  T
Q  130 ggaaatcacacttgaggtcagaacggaacctgggagg 166  Q
    | |||||||| ||||| ||||| | |||||| |||||    
T  17523685 gaaaatcacatttgagatcagacctgaaccttggagg 17523649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 30 - 166
Target Start/End: Original strand, 17529430 - 17529566
Alignment:
Q  30 acattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttgat 129  Q
    ||||| ||||||||||| ||||| || |||| |||||||||||| || || ||| |||| || || || || |||||||||||| | |  ||||| ||||    
T  17529430 acattattctcaaaagtcagcttcccttgatcaatgagcttcttcacgatatacttcaaagcataacacccctcgacatcatgacctaaggcaccctgat 17529529  T
Q  130 ggaaatcacacttgaggtcagaacggaacctgggagg 166  Q
    | |||||||| ||||| ||||| | |||||| |||||    
T  17529530 gaaaatcacatttgagatcagacctgaaccttggagg 17529566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 28 - 170
Target Start/End: Complemental strand, 9618906 - 9618764
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttg 127  Q
    ||||||| ||||||||||| ||||| || ||||  ||||||||||| || || ||| |||| || || || || ||||| |||||| | |  ||||||||    
T  9618906 ggacattattctcaaaagtcagcttcccttgatcgatgagcttcttcacgatatacttcaaagcataacacccctcgacgtcatgacctaaggcaccttg 9618807  T
Q  128 atggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    ||| || ||||| ||||| ||||| | |||||| |||||||||    
T  9618806 atgaaagtcacatttgagatcagacctgaaccttggaggcaac 9618764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 174 - 256
Target Start/End: Original strand, 11426172 - 11426254
Alignment:
Q  174 gcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccat 256  Q
    |||||||||  |||||| || ||  ||||||||||||| | ||  ||||||||||||||||||||| | ||||||||||||||    
T  11426172 gcagtcatgacatcattagctttggccaattcttcccttagagtggctaactcggtacggagctgagcgttctcttcttccat 11426254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 28 - 170
Target Start/End: Original strand, 24592429 - 24592571
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttg 127  Q
    ||||||| ||||||||||| ||||| || ||||  ||||||||||| || || ||| |||| || || || || ||||| |||||| | |  ||||||||    
T  24592429 ggacattattctcaaaagtcagcttcccttgatcgatgagcttcttcacgatatacttcaaagcataacacccctcgacgtcatgacctaaggcaccttg 24592528  T
Q  128 atggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    ||| || ||||| ||||| ||||| | |||||| |||||||||    
T  24592529 atgaaagtcacatttgagatcagacctgaaccttggaggcaac 24592571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 28 - 170
Target Start/End: Original strand, 26669802 - 26669944
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttg 127  Q
    ||||||| ||||||||||| ||||| || ||||  ||||||||||| || || ||| |||| || || || || |||||||||||| | || ||||||||    
T  26669802 ggacattattctcaaaagtcagcttcccttgatcgatgagcttcttcacgatatacttcaaagcataacacccctcgacatcatgacctagggcaccttg 26669901  T
Q  128 atggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    ||| || || || ||||| ||||| | |||||| || ||||||    
T  26669902 atgaaagtcgcatttgagatcagacctgaaccttgggggcaac 26669944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 167 - 284
Target Start/End: Complemental strand, 5120232 - 5120115
Alignment:
Q  167 caacagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttc 266  Q
    ||||||||||||||| | |||||  || ||  ||||||| ||||| | ||| || || ||||||||||||||    ||||||||  |||||||| |||||    
T  5120232 caacagagcagtcatagcatcatgagctttggccaattcctcccttagagatgccaattcggtacggagctgcgtgttctcttccaccatagcctttttc 5120133  T
Q  267 tttcttctgtattctctg 284  Q
     |||||||||||||||||    
T  5120132 cttcttctgtattctctg 5120115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 166
Target Start/End: Complemental strand, 18541052 - 18540916
Alignment:
Q  30 acattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttgat 129  Q
    ||||||||||||||||||| ||| || ||||  || |||||||| || |||||| | |  || ||||| || || ||||||||  | | ||| |||||||    
T  18541052 acattgttctcaaaagttaacttcccttgatctataagcttcttgacgatgtactttagagcatagcacccctcaacatcatgccctaaagcgccttgat 18540953  T
Q  130 ggaaatcacacttgaggtcagaacggaacctgggagg 166  Q
    |||| |||||||| || ||||| |||||||| |||||    
T  18540952 ggaagtcacacttaagatcagagcggaaccttggagg 18540916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 30 - 170
Target Start/End: Complemental strand, 31125173 - 31125033
Alignment:
Q  30 acattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttgat 129  Q
    ||||| ||||||||||| ||||| || ||||  ||||| ||||| || || ||| |||| || || || || |||||||||||  | |  ||||||||||    
T  31125173 acattattctcaaaagtcagcttcccttgatcgatgagtttcttcacgatatacttcaaagcataacacccctcgacatcatgtcctaaggcaccttgat 31125074  T
Q  130 ggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    | || ||||| ||||| ||||| | |||||| |||||||||    
T  31125073 gaaagtcacatttgagatcagacctgaaccttggaggcaac 31125033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 103; Significance: 3e-51; HSPs: 48)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 28 - 170
Target Start/End: Original strand, 22080839 - 22080981
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttg 127  Q
    ||||||||||||||||||||| ||||||||| | |||||||||||||||||||||| |||| ||||| |||||||| ||||||||  |||||||||||||    
T  22080839 ggacattgttctcaaaagttaactttccctggtcaatgagcttctttacaatgtacttcaaagcgtaacatccttcaacatcatggcccagagcaccttg 22080938  T
Q  128 atggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    ||||||||| |||||||||||||||||||||||||||||||||    
T  22080939 atggaaatcgcacttgaggtcagaacggaacctgggaggcaac 22080981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 72 - 167
Target Start/End: Original strand, 19659044 - 19659139
Alignment:
Q  72 tttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttgatggaaatcacacttgaggtcagaacggaacctgggaggc 167  Q
    |||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| ||||||||| ||||||||    
T  19659044 tttacaatgtacctcaacgcgtagcatccttcgacatcatgacccatagcaccttgatggaaatcacacttgaggtccgaacggaacttgggaggc 19659139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 72 - 167
Target Start/End: Complemental strand, 44563311 - 44563216
Alignment:
Q  72 tttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttgatggaaatcacacttgaggtcagaacggaacctgggaggc 167  Q
    |||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| ||||||||| ||||||||    
T  44563311 tttacaatgtacctcaacgcgtagcatccttcgacatcatgacccatagcaccttgatggaaatcacacttgaggtccgaacggaacttgggaggc 44563216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 63 - 167
Target Start/End: Complemental strand, 33244884 - 33244780
Alignment:
Q  63 atgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttgatggaaatcacacttgaggtcagaacggaacctgg 162  Q
    ||||| || |||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||| ||||||||| | |    
T  33244884 atgagtttttttacaatgtacctcaacgcgtagcatccttcgacatcatgacccagcgcaccttgatggaaatcacacttgaggtccgaacggaacttag 33244785  T
Q  163 gaggc 167  Q
    |||||    
T  33244784 gaggc 33244780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 72 - 167
Target Start/End: Complemental strand, 9354832 - 9354737
Alignment:
Q  72 tttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttgatggaaatcacacttgaggtcagaacggaacctgggaggc 167  Q
    ||||||||||||||||||||||||||||||||||| |||||| ||| |||||||||||||||||||||||||||||| ||||||||| ||||||||    
T  9354832 tttacaatgtacctcaacgcgtagcatccttcgacgtcatgacccatagcaccttgatggaaatcacacttgaggtccgaacggaacttgggaggc 9354737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 170 - 259
Target Start/End: Complemental strand, 16282202 - 16282113
Alignment:
Q  170 cagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagc 259  Q
    |||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| |||| ||||||||||||||    
T  16282202 cagagcagtcatggtatcattggccttagccaattcttccctcagagaagctaactcggtacggagctgagcattttcttcttccatagc 16282113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 170 - 256
Target Start/End: Original strand, 22082319 - 22082405
Alignment:
Q  170 cagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccat 256  Q
    ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||    
T  22082319 cagagcagtcatggtgtcattggccttagccaattcttccctcaaagaagctaactcggtacggagctgagcattttcttcttccat 22082405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 170 - 259
Target Start/End: Complemental strand, 33244614 - 33244525
Alignment:
Q  170 cagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagc 259  Q
    ||||||||||||||||| |||||||||| ||||||||||||||| ||||||||||||||||||||||||| |||| ||||||||||||||    
T  33244614 cagagcagtcatggtattattggccttagccaattcttccctcagagaagctaactcggtacggagctgagcattttcttcttccatagc 33244525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 28 - 170
Target Start/End: Complemental strand, 16283703 - 16283561
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttg 127  Q
    ||||||| ||||||||||| |||||||| |||| |||||||||||| || || ||| |||| || ||||| ||||||||||||||| |||| |  |||||    
T  16283703 ggacattattctcaaaagtcagctttccttgatcaatgagcttcttcacgatatacttcaaagcatagcacccttcgacatcatgacccagggtgccttg 16283604  T
Q  128 atggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    |||||||||||| |||||||| || | ||||||||||||||||    
T  16283603 atggaaatcacatttgaggtcggacctgaacctgggaggcaac 16283561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 170 - 259
Target Start/End: Original strand, 19659808 - 19659897
Alignment:
Q  170 cagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagc 259  Q
    |||||||||||||||||||||||||||| ||||||||||||||| ||||||||| ||||||||||||||| |||| || |||||||||||    
T  19659808 cagagcagtcatggtatcattggccttagccaattcttccctcagagaagctaattcggtacggagctgagcattttcctcttccatagc 19659897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 28 - 170
Target Start/End: Complemental strand, 16277808 - 16277666
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttg 127  Q
    ||||||| ||||||||||| |||||||| |||| |||||||||||| || || ||| |||| |||||||| || |||||||||||| |||| || |||||    
T  16277808 ggacattattctcaaaagtcagctttccttgatcaatgagcttcttcacgatatacttcaaagcgtagcacccctcgacatcatgacccagggcgccttg 16277709  T
Q  128 atggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    ||| |||||||| ||||| || || | ||||||||||||||||    
T  16277708 atgaaaatcacatttgagatcggacctgaacctgggaggcaac 16277666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 28 - 170
Target Start/End: Original strand, 27608866 - 27609008
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttg 127  Q
    ||||||| ||||||||||| |||||||| |||| |||||||||||| || || ||| |||| || |||||||| |||||||||||| |||| || |||||    
T  27608866 ggacattattctcaaaagtcagctttccttgatcaatgagcttcttcacgatatacttcaaagcatagcatccctcgacatcatgacccagggcgccttg 27608965  T
Q  128 atggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    ||| |||||||| ||||| || || | |||||| |||||||||    
T  27608966 atgaaaatcacatttgagatcggacctgaaccttggaggcaac 27609008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 28 - 168
Target Start/End: Complemental strand, 18710840 - 18710700
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttg 127  Q
    ||||||| ||||||||||| |||||||| |||| |||||||||||| || || ||| |||| || || ||||| |||||||||||| | || ||||| ||    
T  18710840 ggacattattctcaaaagtcagctttccttgatcaatgagcttcttcacgatatacttcaaagcataacatccctcgacatcatgacctagggcaccctg 18710741  T
Q  128 atggaaatcacacttgaggtcagaacggaacctgggaggca 168  Q
    ||| |||||||||||||| ||||| | |||||| |||||||    
T  18710740 atgaaaatcacacttgagatcagacctgaaccttggaggca 18710700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 170 - 284
Target Start/End: Complemental strand, 9354050 - 9353936
Alignment:
Q  170 cagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttcttt 269  Q
    |||||||||||||  |||||| || ||| ||||||| ||||| | ||  ||||||||||||||||||||| | |||||||||||||||||| ||||| ||    
T  9354050 cagagcagtcatgacatcattagctttagccaattcctcccttagagtggctaactcggtacggagctgagcgttctcttcttccatagcctttttcctt 9353951  T
Q  270 cttctgtattctctg 284  Q
    |||||||| ||||||    
T  9353950 cttctgtactctctg 9353936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 28 - 170
Target Start/End: Complemental strand, 14557878 - 14557736
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttg 127  Q
    ||||||| ||||||||||| |||||||| |||| |||||||||||| || || ||| |||| || ||||| || |||||||||||| |||| || |||||    
T  14557878 ggacattattctcaaaagtcagctttccttgatcaatgagcttcttcacgatatacttcaaagcatagcacccctcgacatcatgacccagggcgccttg 14557779  T
Q  128 atggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    ||| |||||||| ||||| || || | |||||| |||||||||    
T  14557778 atgaaaatcacatttgagatcggacctgaaccttggaggcaac 14557736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 171 - 284
Target Start/End: Original strand, 19209826 - 19209939
Alignment:
Q  171 agagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttctttc 270  Q
    ||||||||||||   ||||| || ||| ||||||| ||| | | ||| ||||||||||| || |||||| | ||||||||||||||||||||||||||||    
T  19209826 agagcagtcatgacgtcattagctttagccaattcctcctttagagaggctaactcggtgcgaagctgagcgttctcttcttccatagcccttttctttc 19209925  T
Q  271 ttctgtattctctg 284  Q
    ||||||||||||||    
T  19209926 ttctgtattctctg 19209939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 171 - 284
Target Start/End: Original strand, 31491216 - 31491329
Alignment:
Q  171 agagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttctttc 270  Q
    ||||||||||||   ||||| || ||| ||||||| ||| | | ||| ||||||||||| || |||||| | ||||||||||||||||||||||||||||    
T  31491216 agagcagtcatgacgtcattagctttagccaattcctcctttagagaggctaactcggtgcgaagctgagcgttctcttcttccatagcccttttctttc 31491315  T
Q  271 ttctgtattctctg 284  Q
    ||||||||||||||    
T  31491316 ttctgtattctctg 31491329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 171 - 284
Target Start/End: Complemental strand, 33257472 - 33257359
Alignment:
Q  171 agagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttctttc 270  Q
    ||||||||||||   ||||| || ||| ||||||| ||| | | ||| ||||||||||| || |||||| | ||||||||||||||||||||||||||||    
T  33257472 agagcagtcatgacgtcattagctttagccaattcctcctttagagaggctaactcggtgcgaagctgagcgttctcttcttccatagcccttttctttc 33257373  T
Q  271 ttctgtattctctg 284  Q
    ||||||||||||||    
T  33257372 ttctgtattctctg 33257359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 30 - 170
Target Start/End: Original strand, 12092687 - 12092827
Alignment:
Q  30 acattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttgat 129  Q
    ||||| ||||||||||| ||||||||||||| |||||||||||| || || ||| |||| || || || || |||||||||||| | | |||||||||||    
T  12092687 acattattctcaaaagtcagctttccctgatcaatgagcttcttcacgatatacttcaaagcataacacccctcgacatcatgacctaaagcaccttgat 12092786  T
Q  130 ggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    | || ||||| ||||| ||||| | |||||| |||||||||    
T  12092787 gaaagtcacatttgagatcagacctgaaccttggaggcaac 12092827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 30 - 170
Target Start/End: Complemental strand, 29829574 - 29829434
Alignment:
Q  30 acattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttgat 129  Q
    ||||| ||||||||||| ||||||||||||| |||||||||||| || || ||| |||| || || || || |||||||||||| | |  ||||||||||    
T  29829574 acattattctcaaaagtcagctttccctgatcaatgagcttcttcacgatatacttcaaagcataacacccctcgacatcatgacctaaggcaccttgat 29829475  T
Q  130 ggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    | |||||||| || || ||||| |||||||| |||||||||    
T  29829474 gaaaatcacatttaagatcagagcggaaccttggaggcaac 29829434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 170 - 256
Target Start/End: Original strand, 2138724 - 2138810
Alignment:
Q  170 cagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccat 256  Q
    |||||||||||||  |||||| |||||| ||||||||||||| | ||  ||||||||||||||||||||| ||||||||||||||||    
T  2138724 cagagcagtcatgacatcattagccttagccaattcttcccttagagtggctaactcggtacggagctgagcattctcttcttccat 2138810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 170 - 284
Target Start/End: Complemental strand, 18709336 - 18709222
Alignment:
Q  170 cagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttcttt 269  Q
    |||||||||||||  |||||  || ||  ||||||| ||| | ||||  ||||||||||| ||||||||| | |||||||||||||||||| ||||||||    
T  18709336 cagagcagtcatgacatcatgagctttggccaattcctcctttaaagtggctaactcggtgcggagctgagcgttctcttcttccatagcctttttcttt 18709237  T
Q  270 cttctgtattctctg 284  Q
    |||||||||||||||    
T  18709236 cttctgtattctctg 18709222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 28 - 170
Target Start/End: Complemental strand, 19688352 - 19688210
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttg 127  Q
    ||||||| ||||||||||| | |||||| |||| ||||||||| || || || ||| |||| || ||||| || |||||||||||| |||| ||||||||    
T  19688352 ggacattattctcaaaagtcaactttccttgatcaatgagctttttcacgatatacttcaaagcatagcacccctcgacatcatgacccagggcaccttg 19688253  T
Q  128 atggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    ||| |||||||| ||||| || || | |||||| |||||||||    
T  19688252 atgaaaatcacatttgagatcggacctgaaccttggaggcaac 19688210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 170 - 284
Target Start/End: Complemental strand, 44562529 - 44562415
Alignment:
Q  170 cagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttcttt 269  Q
    |||||||||||||  |||||| || ||| ||||||| ||||| | ||  ||||||||||| || |||||| | |||||||||||||||||||||||| ||    
T  44562529 cagagcagtcatgacatcattagctttagccaattcctcccttagagtggctaactcggtgcgaagctgagcgttctcttcttccatagcccttttcctt 44562430  T
Q  270 cttctgtattctctg 284  Q
    |||||||| ||||||    
T  44562429 cttctgtactctctg 44562415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 171 - 284
Target Start/End: Original strand, 28363421 - 28363534
Alignment:
Q  171 agagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttctttc 270  Q
    ||||||||||||   ||||| || ||| ||||||| ||| | | ||| ||||||||||| || |||||| | ||||||||||||||||| ||||||||||    
T  28363421 agagcagtcatgacgtcattagctttagccaattcctcctttagagaggctaactcggtgcgaagctgagcgttctcttcttccatagctcttttctttc 28363520  T
Q  271 ttctgtattctctg 284  Q
    ||||||||||||||    
T  28363521 ttctgtattctctg 28363534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 170 - 256
Target Start/End: Complemental strand, 14556377 - 14556291
Alignment:
Q  170 cagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccat 256  Q
    |||||| ||||||  |||||| |||||| ||||||||||||| | ||  ||||||||||||||||||||| ||||||||||||||||    
T  14556377 cagagcggtcatgacatcattagccttagccaattcttcccttagagtggctaactcggtacggagctgagcattctcttcttccat 14556291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 29 - 170
Target Start/End: Original strand, 2137221 - 2137362
Alignment:
Q  29 gacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttga 128  Q
    |||||| ||||||||||| |||||||| |||| ||||||||| || || || ||| |||| || ||||| || |||||||||||| |||  || ||||||    
T  2137221 gacattattctcaaaagtcagctttccttgatcaatgagctttttcacgatatacttcaaagcatagcacccctcgacatcatgacccaaggcgccttga 2137320  T
Q  129 tggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    || |||||||| ||||| || || | |||||| |||||||||    
T  2137321 tgaaaatcacatttgagatcggacctgaaccttggaggcaac 2137362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 167 - 284
Target Start/End: Original strand, 3330964 - 3331081
Alignment:
Q  167 caacagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttc 266  Q
    ||||||||||||||| | |||||  || ||  ||||||| ||||| | ||| || || ||||||||||||||    |||||||| |||||||||||||||    
T  3330964 caacagagcagtcatagcatcatgagctttggccaattcctcccttagagatgccaattcggtacggagctgcgtgttctcttcctccatagcccttttc 3331063  T
Q  267 tttcttctgtattctctg 284  Q
    ||||||||||||||||||    
T  3331064 tttcttctgtattctctg 3331081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 167 - 284
Target Start/End: Original strand, 12094177 - 12094294
Alignment:
Q  167 caacagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttc 266  Q
    ||||||||||||||| | |||||  || ||  ||||||| ||||| | ||| || || |||||||| |||||    ||||||||||||||||||||||||    
T  12094177 caacagagcagtcatagcatcatgagctttggccaattcctcccttagagatgccaattcggtacgaagctgtgtgttctcttcttccatagcccttttc 12094276  T
Q  267 tttcttctgtattctctg 284  Q
    ||||||||||||||||||    
T  12094277 tttcttctgtattctctg 12094294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 167 - 284
Target Start/End: Original strand, 19519587 - 19519704
Alignment:
Q  167 caacagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttc 266  Q
    ||||||||||||||| | |||||  || ||  ||||||| ||||| ||||| || || || ||||| |||||    ||||||||||||||||||||||||    
T  19519587 caacagagcagtcatagcatcatgagctttggccaattcctcccttaaagatgccaattcagtacgaagctgcgtgttctcttcttccatagcccttttc 19519686  T
Q  267 tttcttctgtattctctg 284  Q
    ||||||||||||||||||    
T  19519687 tttcttctgtattctctg 19519704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 167 - 284
Target Start/End: Complemental strand, 19673209 - 19673092
Alignment:
Q  167 caacagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttc 266  Q
    ||||||||||||||| | |||||  || ||  ||||||| ||||| ||||| || || || ||||| |||||    ||||||||||||||||||||||||    
T  19673209 caacagagcagtcatagcatcatgagctttggccaattcctcccttaaagatgccaattcagtacgaagctgtgtgttctcttcttccatagcccttttc 19673110  T
Q  267 tttcttctgtattctctg 284  Q
    ||||||||||||||||||    
T  19673109 tttcttctgtattctctg 19673092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 167 - 284
Target Start/End: Complemental strand, 29828084 - 29827967
Alignment:
Q  167 caacagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttc 266  Q
    ||||||||||||||| | |||||  || ||  ||||||| ||| | ||||| || || | ||||||||| ||  | ||||||||||||||||||||||||    
T  29828084 caacagagcagtcatagcatcatgagctttggccaattcctcctttaaagatgccaatttggtacggagttgcgcgttctcttcttccatagcccttttc 29827985  T
Q  267 tttcttctgtattctctg 284  Q
    ||||||||||||||||||    
T  29827984 tttcttctgtattctctg 29827967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 219 - 284
Target Start/End: Complemental strand, 31353223 - 31353158
Alignment:
Q  219 gctaactcggtacggagctgaacattctcttcttccatagcccttttctttcttctgtattctctg 284  Q
    ||||||||||| || |||||| | ||||||||||||||||||||||||||||||||||| ||||||    
T  31353223 gctaactcggtgcgaagctgagcgttctcttcttccatagcccttttctttcttctgtactctctg 31353158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 30 - 170
Target Start/End: Original strand, 3329470 - 3329610
Alignment:
Q  30 acattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttgat 129  Q
    ||||||||||||||||| ||||| || |||| || ||||||||| || || ||| |||| || || || || |||||||||||| | | |||||||||||    
T  3329470 acattgttctcaaaagtcagcttcccttgatcaacgagcttcttcacgatatacttcaaagcataacacccctcgacatcatgacctaaagcaccttgat 3329569  T
Q  130 ggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    | || ||||| ||||| ||||| | |||||| |||||||||    
T  3329570 gaaagtcacatttgagatcagacctgaaccttggaggcaac 3329610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 225 - 284
Target Start/End: Original strand, 19279989 - 19280048
Alignment:
Q  225 tcggtacggagctgaacattctcttcttccatagcccttttctttcttctgtattctctg 284  Q
    ||||||||||| ||  | ||||||||||||||||||||||||||||||||||||||||||    
T  19279989 tcggtacggagttgcgcgttctcttcttccatagcccttttctttcttctgtattctctg 19280048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 225 - 284
Target Start/End: Complemental strand, 19285178 - 19285119
Alignment:
Q  225 tcggtacggagctgaacattctcttcttccatagcccttttctttcttctgtattctctg 284  Q
    ||||||||||||||    ||||||||||||||||||||||||||||||||||||||||||    
T  19285178 tcggtacggagctgtgtgttctcttcttccatagcccttttctttcttctgtattctctg 19285119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 170 - 256
Target Start/End: Complemental strand, 16276304 - 16276218
Alignment:
Q  170 cagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccat 256  Q
    |||||| ||||||  |||||| || ||| ||||||||||||| | ||  ||||||||||||||||||||| ||||||||||||||||    
T  16276304 cagagcggtcatgacatcattagctttagccaattcttcccttagagtggctaactcggtacggagctgagcattctcttcttccat 16276218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 28 - 170
Target Start/End: Complemental strand, 19674695 - 19674553
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttg 127  Q
    ||||||| ||||||||||| ||||| || |||| |||||||||||| ||||| ||| |||| || || || |  |||||||||||| | |  ||||| ||    
T  19674695 ggacattattctcaaaagtcagcttcccttgatcaatgagcttcttcacaatatacttcaaagcataacacctctcgacatcatgacctaaggcaccctg 19674596  T
Q  128 atggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    ||| |||||||| ||||| ||||| | |||||| |||||||||    
T  19674595 atgaaaatcacatttgagatcagacctgaaccttggaggcaac 19674553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 170 - 256
Target Start/End: Complemental strand, 19686848 - 19686762
Alignment:
Q  170 cagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccat 256  Q
    |||||||||||||  |||||| |||||| | || |||||||| | ||  ||||||||||||||||||||| ||||||||||||||||    
T  19686848 cagagcagtcatgacatcattagccttagctaactcttcccttagagtggctaactcggtacggagctgagcattctcttcttccat 19686762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 170 - 256
Target Start/End: Original strand, 21375004 - 21375090
Alignment:
Q  170 cagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccat 256  Q
    |||||||||||||  |||||| || ||| ||||||||||||| | ||  ||||||||||||||||||||| | ||||||||||||||    
T  21375004 cagagcagtcatgacatcattagctttagccaattcttcccttagagtggctaactcggtacggagctgagcgttctcttcttccat 21375090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 170 - 256
Target Start/End: Original strand, 27610370 - 27610456
Alignment:
Q  170 cagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccat 256  Q
    |||||| ||||||  |||||| || ||| ||||||||||||||| ||  ||||||||||||||||||||| | ||||||||||||||    
T  27610370 cagagcggtcatgacatcattagctttagccaattcttccctcagagtggctaactcggtacggagctgagcgttctcttcttccat 27610456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 28 - 170
Target Start/End: Original strand, 31489711 - 31489853
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttg 127  Q
    ||||||| ||||||||||| ||||| || |||| |||||||||||| || || ||| |||| || || || || |||||||||||| | |  ||||||||    
T  31489711 ggacattattctcaaaagtcagcttcccttgatcaatgagcttcttcacgatatacttcaaagcataacacccctcgacatcatgacctaaggcaccttg 31489810  T
Q  128 atggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    ||| ||||| || ||||| ||||| | |||||| |||||||||    
T  31489811 atgaaaatcgcatttgagatcagacctgaaccttggaggcaac 31489853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 30 - 170
Target Start/End: Complemental strand, 19286714 - 19286574
Alignment:
Q  30 acattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttgat 129  Q
    ||||| ||||||||||| ||||| || |||| |||||| ||||| || || ||| |||| || || || || |||||||||||| | |  ||||||||||    
T  19286714 acattattctcaaaagtcagcttcccttgatcaatgagtttcttcacgatatacttcaaagcataacacccctcgacatcatgacctaaggcaccttgat 19286615  T
Q  130 ggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    | |||||||| ||||| ||||| | |||||| |||||||||    
T  19286614 gaaaatcacatttgagatcagacctgaaccttggaggcaac 19286574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 28 - 170
Target Start/End: Complemental strand, 33258977 - 33258835
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttg 127  Q
    ||||||| ||||||||||| ||||| || ||||  ||||||||||| || || ||| |||| || || || || ||||| |||||| |||  ||||||||    
T  33258977 ggacattattctcaaaagtcagcttcccttgatcgatgagcttcttcacgatatacttcaaagcataacacccctcgacgtcatgacccaaggcaccttg 33258878  T
Q  128 atggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    ||| || ||||| ||||| ||||| | |||||| |||||||||    
T  33258877 atgaaagtcacatttgagatcagacctgaaccttggaggcaac 33258835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 28 - 120
Target Start/End: Complemental strand, 189348 - 189256
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagag 120  Q
    ||||||| ||||||||||| |||||||| |||| ||| ||||| || || || ||| |||| |||||||| || |||||||||||| ||||||    
T  189348 ggacattattctcaaaagtcagctttccttgatcaataagctttttcacgatatacttcaaagcgtagcacccctcgacatcatgacccagag 189256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 30 - 169
Target Start/End: Complemental strand, 31354776 - 31354637
Alignment:
Q  30 acattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttgat 129  Q
    ||||| ||||||||||| ||||| || ||||  ||||||||||| || || ||| |||| || || || || ||||| |||||| | |  ||||||||||    
T  31354776 acattattctcaaaagtcagcttcccttgatcgatgagcttcttcacgatatacttcaaagcataacacccctcgacgtcatgacctaaggcaccttgat 31354677  T
Q  130 ggaaatcacacttgaggtcagaacggaacctgggaggcaa 169  Q
    | |||||||| ||||| ||||| | |||||| ||||||||    
T  31354676 gaaaatcacatttgagatcagacctgaaccttggaggcaa 31354637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 28 - 170
Target Start/End: Original strand, 19208321 - 19208463
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttg 127  Q
    ||||||| ||||||||||| ||||| || ||||  ||||||||||| || || ||| |||| || || || || ||||| |||||| | |  ||||||||    
T  19208321 ggacattattctcaaaagtcagcttcccttgatcgatgagcttcttcacgatatacttcaaagcataacacccctcgacgtcatgacctaaggcaccttg 19208420  T
Q  128 atggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    ||| || ||||| ||||| ||||| | |||||| |||||||||    
T  19208421 atgaaagtcacatttgagatcagacctgaaccttggaggcaac 19208463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 28 - 170
Target Start/End: Original strand, 28361916 - 28362058
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttg 127  Q
    ||||||| ||||||||||| ||||| || ||||  ||||||||||| || || ||| |||| || || || || ||||| |||||| | |  ||||||||    
T  28361916 ggacattattctcaaaagtcagcttcccttgatcgatgagcttcttcacgatatacttcaaagcataacacccctcgacgtcatgacctaaggcaccttg 28362015  T
Q  128 atggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    ||| || ||||| ||||| ||||| | |||||| |||||||||    
T  28362016 atgaaagtcacatttgagatcagacctgaaccttggaggcaac 28362058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0558 (Bit Score: 99; Significance: 7e-49; HSPs: 2)
Name: scaffold0558
Description:

Target: scaffold0558; HSP #1
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 28 - 170
Target Start/End: Original strand, 30 - 172
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttg 127  Q
    |||| |||||||| || |||| ||||||||||| |||||||||||| ||||||||| |||| |||||||||||||| ||||||||| |||||||||||||    
T  30 ggacgttgttctcgaaggttaactttccctgatcaatgagcttcttcacaatgtacttcaaagcgtagcatccttcaacatcatgacccagagcaccttg 129  T
Q  128 atggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    ||||||||||||||||||||||||||||||||||| |||||||    
T  130 atggaaatcacacttgaggtcagaacggaacctggaaggcaac 172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0558; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 170 - 259
Target Start/End: Original strand, 332 - 421
Alignment:
Q  170 cagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagc 259  Q
    |||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||    
T  332 cagagcagtcatggtatcattggccttagccaattcttccctcagagaagctaactcggtacggagctgaacattttcttcttccatagc 421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0260 (Bit Score: 99; Significance: 7e-49; HSPs: 2)
Name: scaffold0260
Description:

Target: scaffold0260; HSP #1
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 32 - 166
Target Start/End: Original strand, 2664 - 2798
Alignment:
Q  32 attgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttgatgg 131  Q
    ||||||||||||||||| |||||| || | |||||||||||| ||||||||| |||| |||||||||||||||||||||||| |||||||||||||||||    
T  2664 attgttctcaaaagttaactttccttggttaatgagcttcttcacaatgtacttcaaagcgtagcatccttcgacatcatgacccagagcaccttgatgg 2763  T
Q  132 aaatcacacttgaggtcagaacggaacctgggagg 166  Q
    ||||||||||||||||||||||||||||| |||||    
T  2764 aaatcacacttgaggtcagaacggaacctaggagg 2798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0260; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 170 - 259
Target Start/End: Original strand, 3468 - 3557
Alignment:
Q  170 cagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagc 259  Q
    ||||||||||||||||| ||| |||||| ||||||||||||||| ||||||||||||||||||||||||| |||| ||||||||||||||    
T  3468 cagagcagtcatggtattattagccttagccaattcttccctcagagaagctaactcggtacggagctgagcattttcttcttccatagc 3557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 99; Significance: 7e-49; HSPs: 49)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 28 - 170
Target Start/End: Original strand, 15391340 - 15391482
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttg 127  Q
    ||||||||||||||||||||| ||||||||  | |||||||||||||||||||||| |||| ||||| |||||||| ||||||||  |||||||||||||    
T  15391340 ggacattgttctcaaaagttaactttccctagtcaatgagcttctttacaatgtacttcaaagcgtaacatccttcaacatcatggcccagagcaccttg 15391439  T
Q  128 atggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    ||||||||| |||||||||||||||||||||||||||||||||    
T  15391440 atggaaatcgcacttgaggtcagaacggaacctgggaggcaac 15391482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 36 - 169
Target Start/End: Complemental strand, 15228131 - 15227998
Alignment:
Q  36 ttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttgatggaaat 135  Q
    |||||||| |||| ||||||||||| |||||||||||| ||||||||| |||| |||||||||||||| ||||| ||| |||||||||||||||||||||    
T  15228131 ttctcaaaggttaactttccctgatcaatgagcttcttcacaatgtacttcaaagcgtagcatccttcaacatcgtgacccagagcaccttgatggaaat 15228032  T
Q  136 cacacttgaggtcagaacggaacctgggaggcaa 169  Q
    ||||||||||||||||||||||||||||||||||    
T  15228031 cacacttgaggtcagaacggaacctgggaggcaa 15227998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 28 - 170
Target Start/End: Complemental strand, 1900526 - 1900384
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttg 127  Q
    ||||||| ||||||||||||| |||||| |||| |||||||||||| ||||||||| |||| | |||||||||||| ||||||||| |||||||||||||    
T  1900526 ggacattattctcaaaagttaactttccttgatcaatgagcttcttcacaatgtacttcaaagtgtagcatccttcaacatcatgacccagagcaccttg 1900427  T
Q  128 atggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    ||||||||||||||||||||||||||| |||||| || |||||    
T  1900426 atggaaatcacacttgaggtcagaacgaaacctgagaagcaac 1900384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 63 - 170
Target Start/End: Original strand, 15284965 - 15285072
Alignment:
Q  63 atgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttgatggaaatcacacttgaggtcagaacggaacctgg 162  Q
    |||||||| |||||||||||| |||| |||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||    
T  15284965 atgagcttttttacaatgtacttcaaagcgtagcatccttcaacatcatgacccagagcaccttgatggaaatcacacttgaggtcagaccggaacctgg 15285064  T
Q  163 gaggcaac 170  Q
    ||||||||    
T  15285065 gaggcaac 15285072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 63 - 167
Target Start/End: Original strand, 24460642 - 24460746
Alignment:
Q  63 atgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttgatggaaatcacacttgaggtcagaacggaacctgg 162  Q
    ||||| || |||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| ||||||||| |||    
T  24460642 atgagtttttttacaatgtacctcaacgcgtagcatccttcgacatcatgacccatagcaccttgatggaaatcacacttgaggtccgaacggaacttgg 24460741  T
Q  163 gaggc 167  Q
    |||||    
T  24460742 gaggc 24460746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 28 - 169
Target Start/End: Original strand, 14235527 - 14235668
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttg 127  Q
    ||||||||||||||||||||| ||||||||| |  |||||||||||||||||| || |||| ||||| ||||| || ||||||||  |||||||||||||    
T  14235527 ggacattgttctcaaaagttaactttccctggtctatgagcttctttacaatgaacttcaaagcgtaacatccctcaacatcatggcccagagcaccttg 14235626  T
Q  128 atggaaatcacacttgaggtcagaacggaacctgggaggcaa 169  Q
    |||||||||||| ||||||||  || ||||||||||||||||    
T  14235627 atggaaatcacatttgaggtcgaaatggaacctgggaggcaa 14235668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 167 - 257
Target Start/End: Original strand, 15286410 - 15286500
Alignment:
Q  167 caacagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccata 257  Q
    |||||||||||||||||| || ||||||||| ||||||||||||||| ||||||||||||||||||||||||| |||| ||||||||||||    
T  15286410 caacagagcagtcatggtgtcgttggccttagccaattcttccctcagagaagctaactcggtacggagctgagcattttcttcttccata 15286500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 170 - 256
Target Start/End: Original strand, 15392822 - 15392908
Alignment:
Q  170 cagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccat 256  Q
    ||||||||||||||| |||||||||||| ||||||||||||||| ||||||||||||||||||||||||| |||| |||||||||||    
T  15392822 cagagcagtcatggtctcattggccttagccaattcttccctcagagaagctaactcggtacggagctgagcattttcttcttccat 15392908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 28 - 170
Target Start/End: Complemental strand, 17014269 - 17014127
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttg 127  Q
    ||||||| ||||||||||| |||||||| |||| |||||||||||| || || ||| |||| |||||||| || |||||||||||| |||| || |||||    
T  17014269 ggacattattctcaaaagtcagctttccttgatcaatgagcttcttcacgatatacttcaaagcgtagcacccctcgacatcatgacccagggcgccttg 17014170  T
Q  128 atggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    ||| |||||||| |||||||| || | ||||||||||||||||    
T  17014169 atgaaaatcacatttgaggtcggacctgaacctgggaggcaac 17014127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 170 - 259
Target Start/End: Complemental strand, 1899025 - 1898936
Alignment:
Q  170 cagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagc 259  Q
    |||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||  |||| || |||||||||||    
T  1899025 cagagcagtcatggtatcattggccttagccaattcttccctcagagaagctaactcggtacggagctgtgcattttcctcttccatagc 1898936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 174 - 259
Target Start/End: Complemental strand, 15222806 - 15222721
Alignment:
Q  174 gcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagc 259  Q
    |||||||||||||||||||| ||| ||||||||||||| | |||||||||||||||||||||||||||||| ||||||||||||||    
T  15222806 gcagtcatggtatcattggctttagccaattcttcccttagagaagctaactcggtacggagctgaacattttcttcttccatagc 15222721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 28 - 170
Target Start/End: Original strand, 24592316 - 24592458
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttg 127  Q
    ||||||| ||||||||||| |||||||| |||| |||||||||||| || || ||| |||| |||||||| || |||||||||||| |||| || |||||    
T  24592316 ggacattattctcaaaagtcagctttccttgatcaatgagcttcttcacgatatacttcaaagcgtagcacccctcgacatcatgacccagggcgccttg 24592415  T
Q  128 atggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    ||| |||||||| ||||| || || | |||||| |||||||||    
T  24592416 atgaaaatcacatttgagatcggacctgaaccttggaggcaac 24592458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 170 - 284
Target Start/End: Original strand, 24593817 - 24593931
Alignment:
Q  170 cagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttcttt 269  Q
    |||||||||||||  |||||| || ||| ||||||| ||||| | ||  ||||||||||||||||||||| | |||||||||||||||||| ||||| ||    
T  24593817 cagagcagtcatgacatcattagctttagccaattcctcccttagagtggctaactcggtacggagctgagcgttctcttcttccatagcctttttcctt 24593916  T
Q  270 cttctgtattctctg 284  Q
    |||||||||||||||    
T  24593917 cttctgtattctctg 24593931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 28 - 170
Target Start/End: Original strand, 14763306 - 14763448
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttg 127  Q
    ||||||| ||||||||||| ||||||||||||| |||||||||||| || || ||| |||| || || || || |||||||||||| | |  ||||||||    
T  14763306 ggacattattctcaaaagtcagctttccctgatcaatgagcttcttcacgatatacttcaaagcataacacccctcgacatcatgacctaaggcaccttg 14763405  T
Q  128 atggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    ||| |||||||| ||||| ||||| | |||||| |||||||||    
T  14763406 atgaaaatcacatttgagatcagacctgaaccttggaggcaac 14763448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 28 - 170
Target Start/End: Original strand, 36344517 - 36344659
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttg 127  Q
    ||||||| ||||||||||| ||||||||||||| || ||||||||| || || ||| |||| || || || || |||||||||||| | || ||||||||    
T  36344517 ggacattattctcaaaagtcagctttccctgatcaacgagcttcttcacgatatacttcaaagcataacacccctcgacatcatgacctagggcaccttg 36344616  T
Q  128 atggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    ||| |||||||| ||||| ||||| | |||||| |||||||||    
T  36344617 atgaaaatcacatttgagatcagacctgaacctcggaggcaac 36344659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 171 - 284
Target Start/End: Complemental strand, 14097305 - 14097192
Alignment:
Q  171 agagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttctttc 270  Q
    ||||||||||||   ||||| || ||| ||||||| ||| | | ||| ||||||||||| || |||||| | ||||||||||||||||||||||||||||    
T  14097305 agagcagtcatgacgtcattagctttagccaattcctcctttagagaggctaactcggtgcgaagctgagcgttctcttcttccatagcccttttctttc 14097206  T
Q  271 ttctgtattctctg 284  Q
    ||||||||||||||    
T  14097205 ttctgtattctctg 14097192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 30 - 170
Target Start/End: Original strand, 33673802 - 33673942
Alignment:
Q  30 acattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttgat 129  Q
    ||||| ||||||||||| ||||||||||||| |||||||||||| || || ||| |||| || || || || |||||||||||| | |  ||||||||||    
T  33673802 acattattctcaaaagtcagctttccctgatcaatgagcttcttcacgatatacttcaaagcataacacccctcgacatcatgacctaaggcaccttgat 33673901  T
Q  130 ggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    | |||||||| ||||| ||||| | |||||| |||||||||    
T  33673902 gaaaatcacatttgagatcagacctgaaccttggaggcaac 33673942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 28 - 170
Target Start/End: Complemental strand, 6570122 - 6569980
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttg 127  Q
    ||||||| ||||||||||| ||||| || |||| |||||||||||| || || ||| |||| || || || || |||||||||||| | | |||||||||    
T  6570122 ggacattattctcaaaagtcagcttcccttgatcaatgagcttcttcacgatatacttcaaagcataacacccctcgacatcatgacctaaagcaccttg 6570023  T
Q  128 atggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    ||| |||||||| ||||| ||||| | |||||| |||||||||    
T  6570022 atgaaaatcacatttgagatcagacctgaaccttggaggcaac 6569980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 36 - 170
Target Start/End: Complemental strand, 14665279 - 14665145
Alignment:
Q  36 ttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttgatggaaat 135  Q
    ||||||||||| |||||||| |||| |||||||||||| || || ||| |||| || ||||| || |||||||||||| |||| || |||||||| ||||    
T  14665279 ttctcaaaagtcagctttccttgatcaatgagcttcttcacgatatacttcaaagcatagcacccctcgacatcatgacccagggcgccttgatgaaaat 14665180  T
Q  136 cacacttgaggtcagaacggaacctgggaggcaac 170  Q
    |||| ||||| || || | |||||| |||||||||    
T  14665179 cacatttgagatcggacctgaaccttggaggcaac 14665145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 170 - 284
Target Start/End: Original strand, 24461433 - 24461547
Alignment:
Q  170 cagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttcttt 269  Q
    |||||||||||||  |||||| || ||| ||||||| ||||| | ||  ||||||||||| || |||||| | |||||||||||||||||||||||| ||    
T  24461433 cagagcagtcatgacatcattagctttagccaattcctcccttagagtggctaactcggtgcgaagctgagcgttctcttcttccatagcccttttcctt 24461532  T
Q  270 cttctgtattctctg 284  Q
    |||||||| ||||||    
T  24461533 cttctgtactctctg 24461547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 28 - 170
Target Start/End: Original strand, 31126520 - 31126662
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttg 127  Q
    ||||||| ||||||||||| ||||||||||||| |||||||||||| || || ||| |||| || || || || |||||||||||| | |  ||||||||    
T  31126520 ggacattattctcaaaagtcagctttccctgatcaatgagcttcttcacgatatacttcaaagcataacacccctcgacatcatgacctaaggcaccttg 31126619  T
Q  128 atggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    ||| || ||||| ||||| ||||| | |||||| |||||||||    
T  31126620 atgaaagtcacatttgagatcagacctgaaccttggaggcaac 31126662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 170 - 284
Target Start/End: Original strand, 33678850 - 33678964
Alignment:
Q  170 cagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttcttt 269  Q
    |||||||||||||   ||||| || ||| ||||||| ||||| | ||  ||||| ||||| || |||||| | |||||||||||||||||||||||||||    
T  33678850 cagagcagtcatgacgtcattagctttagccaattcctcccttagagtggctaattcggtgcgaagctgagcgttctcttcttccatagcccttttcttt 33678949  T
Q  270 cttctgtattctctg 284  Q
    |||||||||||||||    
T  33678950 cttctgtattctctg 33678964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 170 - 259
Target Start/End: Original strand, 14237013 - 14237102
Alignment:
Q  170 cagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagc 259  Q
    ||||||| |||| || ||||  |||||| ||||||||||||||| ||||||||||||||||||||||||| |||| || |||||||||||    
T  14237013 cagagcaatcatagtgtcatgagccttagccaattcttccctcagagaagctaactcggtacggagctgagcattttcctcttccatagc 14237102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 171 - 284
Target Start/End: Complemental strand, 21968465 - 21968352
Alignment:
Q  171 agagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttctttc 270  Q
    ||||||||||||   ||||| || ||| ||||||| ||| | | ||| |||| |||||| || |||||| | ||||||||||||||||||||||||||||    
T  21968465 agagcagtcatgacgtcattagctttagccaattcctcctttagagaggctacctcggtgcgaagctgagcgttctcttcttccatagcccttttctttc 21968366  T
Q  271 ttctgtattctctg 284  Q
    ||||||||||||||    
T  21968365 ttctgtattctctg 21968352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 171 - 284
Target Start/End: Original strand, 31128025 - 31128138
Alignment:
Q  171 agagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttctttc 270  Q
    ||||||||||||   ||||| || ||| ||||||| ||| | | ||| |||| |||||| || |||||| | ||||||||||||||||||||||||||||    
T  31128025 agagcagtcatgacgtcattagctttagccaattcctcctttagagaggctacctcggtgcgaagctgagcgttctcttcttccatagcccttttctttc 31128124  T
Q  271 ttctgtattctctg 284  Q
    ||||||||||||||    
T  31128125 ttctgtattctctg 31128138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 171 - 284
Target Start/End: Original strand, 40107145 - 40107258
Alignment:
Q  171 agagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttctttc 270  Q
    ||||||||||||   ||||| || ||| ||||||| ||| | | ||| ||||||||||| || |||||| |  |||||||||||||||||||||||||||    
T  40107145 agagcagtcatgacgtcattagctttagccaattcctcctttagagaggctaactcggtgcgaagctgagcgctctcttcttccatagcccttttctttc 40107244  T
Q  271 ttctgtattctctg 284  Q
    ||||||||||||||    
T  40107245 ttctgtattctctg 40107258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 30 - 166
Target Start/End: Complemental strand, 21969968 - 21969832
Alignment:
Q  30 acattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttgat 129  Q
    ||||| ||||||||||| ||||||||||||| |||||||||||| || || ||| |||| || || || || |||||||||||| | |  ||||||||||    
T  21969968 acattattctcaaaagtcagctttccctgatcaatgagcttcttcacgatatacttcaaagcataacacccctcgacatcatgacctaaggcaccttgat 21969869  T
Q  130 ggaaatcacacttgaggtcagaacggaacctgggagg 166  Q
    | |||||||| || || ||||| |||||||| |||||    
T  21969868 gaaaatcacatttaagatcagagcggaaccttggagg 21969832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 30 - 166
Target Start/End: Complemental strand, 39850905 - 39850769
Alignment:
Q  30 acattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttgat 129  Q
    ||||| ||||||||||| ||||||||||||| || ||||||||| || || ||| |||| || || || || |||||||||||| | | |||||||||||    
T  39850905 acattattctcaaaagtcagctttccctgatcaacgagcttcttcacgatatacttcaaagcataacacccctcgacatcatgacctaaagcaccttgat 39850806  T
Q  130 ggaaatcacacttgaggtcagaacggaacctgggagg 166  Q
    | |||||||| || || ||||| |||||||| |||||    
T  39850805 gaaaatcacatttaagatcagagcggaaccttggagg 39850769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 170 - 256
Target Start/End: Complemental strand, 14663783 - 14663697
Alignment:
Q  170 cagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccat 256  Q
    |||||||||||||  |||||| |||||| ||||||||||||| | ||  ||||||||||||||||||||| |||| |||||||||||    
T  14663783 cagagcagtcatgacatcattagccttagccaattcttcccttagagtggctaactcggtacggagctgagcattttcttcttccat 14663697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 167 - 284
Target Start/End: Complemental strand, 6568639 - 6568522
Alignment:
Q  167 caacagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttc 266  Q
    ||||||||||||||| | |||||  || ||  ||||||| ||| | ||||| || || |||||||| |||||    ||||||||||||||||||||||||    
T  6568639 caacagagcagtcatagcatcatgagctttggccaattcctcctttaaagatgccaattcggtacgaagctgcgtgttctcttcttccatagcccttttc 6568540  T
Q  267 tttcttctgtattctctg 284  Q
    ||||||||||||||||||    
T  6568539 tttcttctgtattctctg 6568522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 167 - 284
Target Start/End: Complemental strand, 39849409 - 39849292
Alignment:
Q  167 caacagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttc 266  Q
    ||||||||||||||| | |||||  || ||  ||||||| ||| | ||||| || || | ||||||||| ||  | ||||||||||||||||||||||||    
T  39849409 caacagagcagtcatagcatcatgagctttggccaattcctcctttaaagatgccaatttggtacggagttgcgcgttctcttcttccatagcccttttc 39849310  T
Q  267 tttcttctgtattctctg 284  Q
    ||||||||||||||||||    
T  39849309 tttcttctgtattctctg 39849292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 225 - 284
Target Start/End: Complemental strand, 5004598 - 5004539
Alignment:
Q  225 tcggtacggagctgaacattctcttcttccatagcccttttctttcttctgtattctctg 284  Q
    ||||||||||||||    ||||||||||||||||||||||||||||||||||||||||||    
T  5004598 tcggtacggagctgcgagttctcttcttccatagcccttttctttcttctgtattctctg 5004539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 225 - 284
Target Start/End: Original strand, 14764847 - 14764906
Alignment:
Q  225 tcggtacggagctgaacattctcttcttccatagcccttttctttcttctgtattctctg 284  Q
    ||||||||||||||    ||||||||||||||||||||||||||||||||||||||||||    
T  14764847 tcggtacggagctgcgtgttctcttcttccatagcccttttctttcttctgtattctctg 14764906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 225 - 284
Target Start/End: Original strand, 36346055 - 36346114
Alignment:
Q  225 tcggtacggagctgaacattctcttcttccatagcccttttctttcttctgtattctctg 284  Q
    ||||||||||||||    ||||||||||||||||||||||||||||||||||||||||||    
T  36346055 tcggtacggagctgcgtgttctcttcttccatagcccttttctttcttctgtattctctg 36346114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 225 - 284
Target Start/End: Complemental strand, 54832118 - 54832059
Alignment:
Q  225 tcggtacggagctgaacattctcttcttccatagcccttttctttcttctgtattctctg 284  Q
    ||||||||||||||    ||||||||||||||||||||||||||||||||||||||||||    
T  54832118 tcggtacggagctgtgtgttctcttcttccatagcccttttctttcttctgtattctctg 54832059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 28 - 170
Target Start/End: Complemental strand, 14098810 - 14098668
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttg 127  Q
    ||||||| ||||||||||| ||||| || |||| |||||||||||| || || ||| |||| || || || || |||||||||||| | |  ||||||||    
T  14098810 ggacattattctcaaaagtcagcttcccttgatcaatgagcttcttcacgatatacttcaaagcataacacccctcgacatcatgacctaaggcaccttg 14098711  T
Q  128 atggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    ||| |||||||| ||||| ||||  | |||||| |||||||||    
T  14098710 atgaaaatcacatttgagatcagtcctgaaccttggaggcaac 14098668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 170 - 256
Target Start/End: Complemental strand, 17012765 - 17012679
Alignment:
Q  170 cagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccat 256  Q
    |||||| ||||||  |||||| || ||| ||||||||||||| | ||  ||||||||||||||||||||| ||||||||||||||||    
T  17012765 cagagcggtcatgacatcattagctttagccaattcttcccttagagtggctaactcggtacggagctgagcattctcttcttccat 17012679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 28 - 170
Target Start/End: Original strand, 18800615 - 18800757
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttg 127  Q
    ||||||| ||||||||||| ||||| || |||| |||||||||||| || || ||| |||| || || || || |||||||||||| | |  ||||||||    
T  18800615 ggacattattctcaaaagtcagcttcccttgatcaatgagcttcttcacgatatacttcaaagcataacacccctcgacatcatgacctaaggcaccttg 18800714  T
Q  128 atggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    ||| ||||| || ||||| ||||| | |||||| |||||||||    
T  18800715 atgaaaatcgcatttgagatcagacctgaaccttggaggcaac 18800757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 170 - 284
Target Start/End: Complemental strand, 30752507 - 30752393
Alignment:
Q  170 cagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttcttt 269  Q
    |||||||||||||   ||||| || ||| ||||||| ||||| | ||  ||||| ||||| || |||||| | |||||||||||||||||||||||| ||    
T  30752507 cagagcagtcatgacgtcattagctttagccaattcctcccttagagtggctaattcggtgcgaagctgagcgttctcttcttccatagcccttttcctt 30752408  T
Q  270 cttctgtattctctg 284  Q
    |||||||| ||||||    
T  30752407 cttctgtactctctg 30752393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 28 - 170
Target Start/End: Original strand, 40105640 - 40105782
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttg 127  Q
    ||||||| ||||||||||| ||||| || ||||  ||||||||||| || || ||| |||| || || || || |||||||||||| | || ||||||||    
T  40105640 ggacattattctcaaaagtcagcttcccttgatcgatgagcttcttcacgatatacttcaaagcataacacccctcgacatcatgacctagggcaccttg 40105739  T
Q  128 atggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    ||| || ||||| ||||| ||||| | |||||| |||||||||    
T  40105740 atgaaagtcacatttgagatcagacctgaaccttggaggcaac 40105782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 243 - 284
Target Start/End: Original strand, 18801505 - 18801546
Alignment:
Q  243 ttctcttcttccatagcccttttctttcttctgtattctctg 284  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  18801505 ttctcttcttccatagcccttttctttcttctgtattctctg 18801546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 167 - 284
Target Start/End: Complemental strand, 19372047 - 19371930
Alignment:
Q  167 caacagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttc 266  Q
    ||||||||||||||| | |||||  || ||  ||||||| ||| | | ||| || || ||||||||||||||    ||||||||||||||||||||||||    
T  19372047 caacagagcagtcatagcatcatgagctttggccaattcctcctttagagatgccaattcggtacggagctgcgtgttctcttcttccatagcccttttc 19371948  T
Q  267 tttcttctgtattctctg 284  Q
    |||||||| |||||||||    
T  19371947 tttcttctatattctctg 19371930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 30 - 170
Target Start/End: Complemental strand, 54833654 - 54833514
Alignment:
Q  30 acattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttgat 129  Q
    ||||| ||||||||||| ||||| || |||| |||||| ||||| || || ||| |||| || || || || |||||||||||| | |  ||||||||||    
T  54833654 acattattctcaaaagtcagcttcccttgatcaatgagtttcttcacgatatacttcaaagcataacacccctcgacatcatgacctaaggcaccttgat 54833555  T
Q  130 ggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    | |||||||| ||||| ||||| | |||||| |||||||||    
T  54833554 gaaaatcacatttgagatcagacctgaaccttggaggcaac 54833514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 28 - 170
Target Start/End: Complemental strand, 5006142 - 5006000
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttg 127  Q
    ||||||| ||||||||||| | ||| || ||||  ||||||||||| || || ||| |||| || || || || |||||||||||| | |  ||||||||    
T  5006142 ggacattattctcaaaagtcaacttcccttgatcgatgagcttcttcacgatatacttcaaagcataacacccctcgacatcatgacctaaggcaccttg 5006043  T
Q  128 atggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    ||| |||||||| ||||| ||||| | |||||| |||||||||    
T  5006042 atgaaaatcacatttgagatcagacctgaaccttggaggcaac 5006000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 167 - 284
Target Start/End: Original strand, 34190442 - 34190559
Alignment:
Q  167 caacagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttc 266  Q
    ||||||||||||||| | |||||  || ||  ||||||| ||| | | ||| || || ||||||||||||||    ||||||||||||||| || |||||    
T  34190442 caacagagcagtcatagcatcatgagctttggccaattcctcctttagagatgccaattcggtacggagctgcgtgttctcttcttccataacctttttc 34190541  T
Q  267 tttcttctgtattctctg 284  Q
    ||||||||||||||||||    
T  34190542 tttcttctgtattctctg 34190559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 30 - 170
Target Start/End: Complemental strand, 30754021 - 30753881
Alignment:
Q  30 acattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttgat 129  Q
    ||||| ||||||||||| ||||| || |||| |||||| ||||| || || ||| |||| || || || || |||||||||||| | |  ||||||||||    
T  30754021 acattattctcaaaagtcagcttcccttgatcaatgagtttcttcacgatatacttcaaagcataacacccctcgacatcatgacctaaggcaccttgat 30753922  T
Q  130 ggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    | || ||||| ||||| ||||| | |||||| |||||||||    
T  30753921 gaaagtcacatttgagatcagacctgaaccttggaggcaac 30753881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 30 - 166
Target Start/End: Original strand, 34188964 - 34189100
Alignment:
Q  30 acattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttgat 129  Q
    ||||||||||||||||||| ||| || ||||  || |||||||| || |||||| | |  || ||||| || || ||||||||  | | |||||||||||    
T  34188964 acattgttctcaaaagttaacttcccttgatctataagcttcttgacgatgtactttagagcatagcacccctcaacatcatgccctaaagcaccttgat 34189063  T
Q  130 ggaaatcacacttgaggtcagaacggaacctgggagg 166  Q
    |||| |||||||| || ||||| |||||||| |||||    
T  34189064 ggaagtcacacttaagatcagagcggaaccttggagg 34189100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 166
Target Start/End: Complemental strand, 24112929 - 24112793
Alignment:
Q  30 acattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttgat 129  Q
    ||||||||||||||||||| ||| || ||||  || |||||||| || |||||| | |  || ||||| || || ||||||||  | | ||| |||||||    
T  24112929 acattgttctcaaaagttaacttcccttgatctataagcttcttgacgatgtactttagagcatagcacccctcaacatcatgccctaaagcgccttgat 24112830  T
Q  130 ggaaatcacacttgaggtcagaacggaacctgggagg 166  Q
    |||| |||||||| || ||||| |||||||| |||||    
T  24112829 ggaagtcacacttaagatcagagcggaaccttggagg 24112793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 170
Target Start/End: Original strand, 27163321 - 27163461
Alignment:
Q  30 acattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttgat 129  Q
    ||||| ||||||||||| ||||| || |||| |||||| ||||| || || ||  |||| || || || || |||||||||||| | || ||||||||||    
T  27163321 acattattctcaaaagtcagcttcccttgatcaatgagtttcttcacgatatatttcaaagcataacacccctcgacatcatgacctagggcaccttgat 27163420  T
Q  130 ggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    | || || || ||||| ||||| | |||||| |||||||||    
T  27163421 gaaagtcgcatttgagatcagacctgaaccttggaggcaac 27163461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 89; Significance: 6e-43; HSPs: 2)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 28 - 172
Target Start/End: Complemental strand, 21815 - 21671
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttg 127  Q
    |||||||||||| |||||||| ||||||||| | |||||||||||||||||| ||| |||| ||||| |||||||| ||||| ||  ||||||| |||||    
T  21815 ggacattgttcttaaaagttaactttccctggtcaatgagcttctttacaatctacttcaaagcgtaacatccttcaacatcttggcccagagccccttg 21716  T
Q  128 atggaaatcacacttgaggtcagaacggaacctgggaggcaacag 172  Q
    ||||||||| |||||||||||||||||||||||||||||||||||    
T  21715 atggaaatcgcacttgaggtcagaacggaacctgggaggcaacag 21671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 170 - 256
Target Start/End: Complemental strand, 20335 - 20249
Alignment:
Q  170 cagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccat 256  Q
    ||||||||||||||| |||||||||||| ||||||||||||||| ||||||| ||| ||||||||||||| |||| |||||||||||    
T  20335 cagagcagtcatggtgtcattggccttagccaattcttccctcagagaagctcacttggtacggagctgagcattttcttcttccat 20249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 88; Significance: 3e-42; HSPs: 126)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 63 - 170
Target Start/End: Original strand, 16626584 - 16626691
Alignment:
Q  63 atgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttgatggaaatcacacttgaggtcagaacggaacctgg 162  Q
    |||||||| |||||||||||| |||| |||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  16626584 atgagcttttttacaatgtacttcaaagcgtagcatccttcaacatcatgacccagagcaccttgatggaaatcacacttgaggtcagaacggaacctgg 16626683  T
Q  163 gaggcaac 170  Q
    ||||||||    
T  16626684 gaggcaac 16626691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 63 - 170
Target Start/End: Complemental strand, 18530568 - 18530461
Alignment:
Q  63 atgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttgatggaaatcacacttgaggtcagaacggaacctgg 162  Q
    |||||||| |||||||||||| |||| |||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  18530568 atgagcttttttacaatgtacttcaaagcgtagcatccttcaacatcatgacccagagcaccttgatggaaatcacacttgaggtcagaacggaacctgg 18530469  T
Q  163 gaggcaac 170  Q
    ||||||||    
T  18530468 gaggcaac 18530461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 63 - 167
Target Start/End: Complemental strand, 5652567 - 5652463
Alignment:
Q  63 atgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttgatggaaatcacacttgaggtcagaacggaacctgg 162  Q
    ||||| || |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| |||    
T  5652567 atgagtttttttacaatgtacctcaacgcgtagcatccttcgacatcatgacccagagcaccttgatggaaatcacacttgaggtccgaacggaacttgg 5652468  T
Q  163 gaggc 167  Q
    |||||    
T  5652467 gaggc 5652463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 28 - 166
Target Start/End: Complemental strand, 32292967 - 32292829
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttg 127  Q
    |||| |||||||||||||| | |||||| || | |||||||||||| ||||||||  |||| || ||||||||||||||||||||| |||||||||||||    
T  32292967 ggacgttgttctcaaaagtcaactttccttggttaatgagcttcttcacaatgtatttcaaagcatagcatccttcgacatcatgacccagagcaccttg 32292868  T
Q  128 atggaaatcacacttgaggtcagaacggaacctgggagg 166  Q
    |||||||||||| ||||||||||| ||||||||||||||    
T  32292867 atggaaatcacatttgaggtcagaccggaacctgggagg 32292829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 63 - 167
Target Start/End: Complemental strand, 4626124 - 4626020
Alignment:
Q  63 atgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttgatggaaatcacacttgaggtcagaacggaacctgg 162  Q
    ||||| || |||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| ||||||||| |||    
T  4626124 atgagtttttttacaatgtacctcaacgcgtagcatccttcgacatcatgacccatagcaccttgatggaaatcacacttgaggtccgaacggaacttgg 4626025  T
Q  163 gaggc 167  Q
    |||||    
T  4626024 gaggc 4626020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 28 - 166
Target Start/End: Original strand, 31034160 - 31034298
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttg 127  Q
    |||| |||||||||||||| | |||||| || | |||||||||||| ||||||||  |||| || ||||||||||||||||||||| |||||||||||||    
T  31034160 ggacgttgttctcaaaagtcaactttccttggttaatgagcttcttcacaatgtatttcaaagcatagcatccttcgacatcatgacccagagcaccttg 31034259  T
Q  128 atggaaatcacacttgaggtcagaacggaacctgggagg 166  Q
    |||||||||||| ||||||||||| |||||||| |||||    
T  31034260 atggaaatcacatttgaggtcagaccggaacctaggagg 31034298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 63 - 167
Target Start/End: Original strand, 17993862 - 17993966
Alignment:
Q  63 atgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttgatggaaatcacacttgaggtcagaacggaacctgg 162  Q
    ||||| || |||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||| |||||||| ||||||||| |||    
T  17993862 atgagtttttttacaatgtacctcaacgcgtagcatccttcgacatcatgacccatagcaccttgatggaaatcacatttgaggtccgaacggaacttgg 17993961  T
Q  163 gaggc 167  Q
    |||||    
T  17993962 gaggc 17993966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 170 - 255
Target Start/End: Original strand, 15728362 - 15728447
Alignment:
Q  170 cagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttcca 255  Q
    |||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||    
T  15728362 cagagcagtcatggtatcattggccttagccaattcttccctcagagaagctaactcggtacggagctgaacattttcttcttcca 15728447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 170 - 259
Target Start/End: Complemental strand, 5649550 - 5649461
Alignment:
Q  170 cagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagc 259  Q
    |||||||||||||||||||||||||||| ||||||||||||||| ||||||||| ||||||||||||||| |||| || |||||||||||    
T  5649550 cagagcagtcatggtatcattggccttagccaattcttccctcagagaagctaattcggtacggagctgagcattttcctcttccatagc 5649461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 170 - 259
Target Start/End: Original strand, 15335514 - 15335603
Alignment:
Q  170 cagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagc 259  Q
    ||||||||||||||| |||||||||||  ||||||||||||||| ||||||||||||||||||||||||| |||| ||||||||||||||    
T  15335514 cagagcagtcatggtgtcattggccttggccaattcttccctcagagaagctaactcggtacggagctgagcattttcttcttccatagc 15335603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 170 - 259
Target Start/End: Original strand, 15894253 - 15894342
Alignment:
Q  170 cagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagc 259  Q
    |||||||||||||||||||||||||||| ||||||||||||||| || |||||||||||||||||||||| | || ||||||||||||||    
T  15894253 cagagcagtcatggtatcattggccttagccaattcttccctcagagtagctaactcggtacggagctgagcgttttcttcttccatagc 15894342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 170 - 259
Target Start/End: Complemental strand, 18529103 - 18529014
Alignment:
Q  170 cagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagc 259  Q
    ||||||||||||||| |||||||||||| ||||||||||||||| ||||||||||||||||||||||||| |||| || |||||||||||    
T  18529103 cagagcagtcatggtgtcattggccttagccaattcttccctcagagaagctaactcggtacggagctgagcattttcctcttccatagc 18529014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 170 - 284
Target Start/End: Complemental strand, 4625333 - 4625219
Alignment:
Q  170 cagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttcttt 269  Q
    |||||||||||||  |||||| || ||| ||||||| ||||| | ||  ||||||||||||||||||||| | |||||||||||||||||| ||||||||    
T  4625333 cagagcagtcatgacatcattagctttagccaattcctcccttagagtggctaactcggtacggagctgagcgttctcttcttccatagcctttttcttt 4625234  T
Q  270 cttctgtattctctg 284  Q
    |||||||||||||||    
T  4625233 cttctgtattctctg 4625219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 28 - 170
Target Start/End: Original strand, 15741137 - 15741279
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttg 127  Q
    ||||||| ||||||||||| |||||||| |||| |||||||||||| || || ||| |||| || |||||||| |||||||||||| ||||||| |||||    
T  15741137 ggacattattctcaaaagtcagctttccttgatcaatgagcttcttcacgatatacttcaaagcatagcatccctcgacatcatgacccagagcgccttg 15741236  T
Q  128 atggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    ||| |||||||| ||||| || || | |||||| |||||||||    
T  15741237 atgaaaatcacatttgagatcggacctgaaccttggaggcaac 15741279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 170 - 256
Target Start/End: Complemental strand, 32292662 - 32292576
Alignment:
Q  170 cagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccat 256  Q
    |||||||||||||||||||||||||||| ||||||||||||||| ||||||||| ||||||||||||||| |||| || ||||||||    
T  32292662 cagagcagtcatggtatcattggccttagccaattcttccctcagagaagctaattcggtacggagctgagcattttcctcttccat 32292576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 170 - 259
Target Start/End: Complemental strand, 4686753 - 4686664
Alignment:
Q  170 cagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagc 259  Q
    ||||||||||||||||| |||||||||| ||||||||||||||| ||||||||| ||||||||||||||| |||| || |||||||||||    
T  4686753 cagagcagtcatggtattattggccttagccaattcttccctcagagaagctaattcggtacggagctgagcattttcctcttccatagc 4686664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 28 - 173
Target Start/End: Complemental strand, 8296187 - 8296042
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttg 127  Q
    ||||||| ||||||||||| | |||||| |||| |||||||||||| || || ||| |||| || ||||| || |||||||||||| |||| ||||||||    
T  8296187 ggacattattctcaaaagtcaactttccttgatcaatgagcttcttcacgatatacttcaaagcatagcacccctcgacatcatgacccagggcaccttg 8296088  T
Q  128 atggaaatcacacttgaggtcagaacggaacctgggaggcaacaga 173  Q
    ||| |||||||| ||||| || || | |||||||||||||||||||    
T  8296087 atgaaaatcacatttgagatcggacctgaacctgggaggcaacaga 8296042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 28 - 169
Target Start/End: Original strand, 15892749 - 15892890
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttg 127  Q
    ||||||| ||||||||||| |||||||| |||| |||||||||||| || || ||| |||| || ||||| || |||||||||||| |||| || |||||    
T  15892749 ggacattattctcaaaagtcagctttccttgatcaatgagcttcttcacgatatacttcaaagcatagcacccctcgacatcatgacccagggcgccttg 15892848  T
Q  128 atggaaatcacacttgaggtcagaacggaacctgggaggcaa 169  Q
    |||||||||||| ||||| || || | |||||||||||||||    
T  15892849 atggaaatcacatttgagatcggacctgaacctgggaggcaa 15892890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 170 - 284
Target Start/End: Complemental strand, 4720342 - 4720228
Alignment:
Q  170 cagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttcttt 269  Q
    |||||||||||||  |||||| || ||| ||||||| ||||| | ||  ||||||||||||||||||||| | |||||||||||||||||| ||||| ||    
T  4720342 cagagcagtcatgacatcattagctttagccaattcctcccttagagtggctaactcggtacggagctgagcgttctcttcttccatagcctttttcctt 4720243  T
Q  270 cttctgtattctctg 284  Q
    |||||||||||||||    
T  4720242 cttctgtattctctg 4720228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 170 - 284
Target Start/End: Complemental strand, 6191027 - 6190913
Alignment:
Q  170 cagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttcttt 269  Q
    |||||||||||||  |||||| || ||| ||||||| ||||| | ||  ||||||||||||||||||||| | |||||||||||||||||| ||||| ||    
T  6191027 cagagcagtcatgacatcattagctttagccaattcctcccttagagtggctaactcggtacggagctgagcgttctcttcttccatagcctttttcctt 6190928  T
Q  270 cttctgtattctctg 284  Q
    |||||||||||||||    
T  6190927 cttctgtattctctg 6190913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 28 - 170
Target Start/End: Complemental strand, 7073427 - 7073285
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttg 127  Q
    ||||||| |||||||||||||||||||| |||| |||||||||||| || || ||| |||| || || || || |||||||||||| | || ||||||||    
T  7073427 ggacattattctcaaaagttagctttccttgatcaatgagcttcttcacgatatacttcaaagcataacacccctcgacatcatgacctagggcaccttg 7073328  T
Q  128 atggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    ||| |||||||| ||||| ||||| | |||||| |||||||||    
T  7073327 atgaaaatcacatttgagatcagacctgaaccttggaggcaac 7073285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 28 - 170
Target Start/End: Complemental strand, 18330884 - 18330742
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttg 127  Q
    ||||||| ||||||||||| |||||||| |||| |||||||||||| || || ||| |||| |||||||| || |||||||||||| |||| || |||||    
T  18330884 ggacattattctcaaaagtcagctttccttgatcaatgagcttcttcacgatatacttcaaagcgtagcacccctcgacatcatgacccagggcgccttg 18330785  T
Q  128 atggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    ||| |||||||| ||||| || || | |||||| |||||||||    
T  18330784 atgaaaatcacatttgagatcggacctgaaccttggaggcaac 18330742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 28 - 170
Target Start/End: Original strand, 22387621 - 22387763
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttg 127  Q
    ||||||| ||||||||||| |||||||| |||| |||||||||||| || || ||| |||| || ||||| || |||||||||||| |||| || |||||    
T  22387621 ggacattattctcaaaagtcagctttccttgatcaatgagcttcttcacgatatacttcaaagcatagcacccctcgacatcatgacccagggcgccttg 22387720  T
Q  128 atggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    ||| |||||||| ||||| ||||| | |||||| |||||||||    
T  22387721 atgaaaatcacatttgagatcagacctgaaccttggaggcaac 22387763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 28 - 170
Target Start/End: Original strand, 29148798 - 29148940
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttg 127  Q
    ||||||| ||||||||||| |||||||| |||| |||||||||||| || || ||| |||| || ||||| || |||||||||||| | || ||||||||    
T  29148798 ggacattattctcaaaagtcagctttccttgatcaatgagcttcttcacgatatacttcaaagcatagcacccctcgacatcatgacctagggcaccttg 29148897  T
Q  128 atggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    ||| |||||||| ||||| ||||| | |||||| |||||||||    
T  29148898 atgaaaatcacatttgagatcagacctgaaccttggaggcaac 29148940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 170 - 256
Target Start/End: Original strand, 31034465 - 31034551
Alignment:
Q  170 cagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccat 256  Q
    |||||||||||||||||||||||||||| | ||||||||||||| ||||||||| ||||||||||||||| |||| || ||||||||    
T  31034465 cagagcagtcatggtatcattggccttagctaattcttccctcagagaagctaattcggtacggagctgagcattttcctcttccat 31034551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 28 - 173
Target Start/End: Complemental strand, 6192531 - 6192386
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttg 127  Q
    ||||||| ||||||||||| |||||||| |||| |||||||||||| || || ||| |||| || ||||| || |||||||||||| | || ||||||||    
T  6192531 ggacattattctcaaaagtcagctttccttgatcaatgagcttcttcacgatatacttcaaagcatagcacccctcgacatcatgacctagggcaccttg 6192432  T
Q  128 atggaaatcacacttgaggtcagaacggaacctgggaggcaacaga 173  Q
    ||| |||||||| |||||||| || | |||||| ||||||| ||||    
T  6192431 atgaaaatcacatttgaggtcggacctgaaccttggaggcagcaga 6192386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 171 - 284
Target Start/End: Original strand, 50135619 - 50135732
Alignment:
Q  171 agagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttctttc 270  Q
    ||||||||||||  |||||| || ||| ||||||| ||| | | ||| ||||||||||| || |||||| | ||||||||||||||||||||||||||||    
T  50135619 agagcagtcatgacatcattagctttagccaattcctcctttagagaggctaactcggtgcgaagctgagcgttctcttcttccatagcccttttctttc 50135718  T
Q  271 ttctgtattctctg 284  Q
    ||||||||||||||    
T  50135719 ttctgtattctctg 50135732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 28 - 168
Target Start/End: Complemental strand, 18051477 - 18051337
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttg 127  Q
    ||||||| ||||||||||| |||||||| |||| |||||||||||| || || ||| |||| || ||||| || |||||||||||| |||| || |||||    
T  18051477 ggacattattctcaaaagtcagctttccttgatcaatgagcttcttcacgatatacttcaaagcatagcacccctcgacatcatgacccagggcgccttg 18051378  T
Q  128 atggaaatcacacttgaggtcagaacggaacctgggaggca 168  Q
    || ||||||||| ||||| || || | ||||||||||||||    
T  18051377 atagaaatcacatttgagatcggacctgaacctgggaggca 18051337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 28 - 170
Target Start/End: Original strand, 4346730 - 4346872
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttg 127  Q
    ||||||| ||||||||||| ||||||||||||| |||||||||||| || || ||| |||| || || || || |||||||||||| | |  ||||||||    
T  4346730 ggacattattctcaaaagtcagctttccctgatcaatgagcttcttcacgatatacttcaaagcataacacccctcgacatcatgacctaaggcaccttg 4346829  T
Q  128 atggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    ||| |||||||| ||||| ||||| | |||||| |||||||||    
T  4346830 atgaaaatcacatttgagatcagacctgaaccttggaggcaac 4346872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 170 - 284
Target Start/End: Complemental strand, 5712613 - 5712499
Alignment:
Q  170 cagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttcttt 269  Q
    |||||||||||||  |||||| || ||| ||||||| ||||| | ||  ||||||||||||||||||||| | |||||||||||||||||| ||||| ||    
T  5712613 cagagcagtcatgacatcattagctttagccaattcctcccttagagtggctaactcggtacggagctgagcgttctcttcttccatagcctttttcctt 5712514  T
Q  270 cttctgtattctctg 284  Q
    |||||||| ||||||    
T  5712513 cttctgtactctctg 5712499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 170 - 284
Target Start/End: Complemental strand, 5723523 - 5723409
Alignment:
Q  170 cagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttcttt 269  Q
    |||||||||||||  |||||| || ||| ||||||| ||||| | ||  ||||||||||||||||||||| | |||||||||||||||||| ||||| ||    
T  5723523 cagagcagtcatgacatcattagctttagccaattcctcccttagagtggctaactcggtacggagctgagcgttctcttcttccatagcctttttcctt 5723424  T
Q  270 cttctgtattctctg 284  Q
    |||||||| ||||||    
T  5723423 cttctgtactctctg 5723409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 170 - 284
Target Start/End: Original strand, 5757942 - 5758056
Alignment:
Q  170 cagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttcttt 269  Q
    |||||||||||||  |||||| || ||| ||||||| ||||| | ||  ||||||||||||||||||||| | |||||||||||||||||| ||||| ||    
T  5757942 cagagcagtcatgacatcattagctttagccaattcctcccttagagtggctaactcggtacggagctgagcgttctcttcttccatagcctttttcctt 5758041  T
Q  270 cttctgtattctctg 284  Q
    |||||||| ||||||    
T  5758042 cttctgtactctctg 5758056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 170 - 284
Target Start/End: Original strand, 5768845 - 5768959
Alignment:
Q  170 cagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttcttt 269  Q
    |||||||||||||  |||||| || ||| ||||||| ||||| | ||  ||||||||||||||||||||| | |||||||||||||||||| ||||| ||    
T  5768845 cagagcagtcatgacatcattagctttagccaattcctcccttagagtggctaactcggtacggagctgagcgttctcttcttccatagcctttttcctt 5768944  T
Q  270 cttctgtattctctg 284  Q
    |||||||| ||||||    
T  5768945 cttctgtactctctg 5768959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 28 - 170
Target Start/End: Original strand, 8301310 - 8301452
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttg 127  Q
    ||||||| ||||||||||| |||||||| |||| |||||||||||| || || ||| |||| || ||||| || || ||||||||| |||| || |||||    
T  8301310 ggacattattctcaaaagtcagctttccttgatcaatgagcttcttcacgatatacttcaaagcatagcacccctctacatcatgacccagggcgccttg 8301409  T
Q  128 atggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    |||||||||||| ||||| || || | |||||| |||||||||    
T  8301410 atggaaatcacatttgagatcggacctgaaccttggaggcaac 8301452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 28 - 170
Target Start/End: Original strand, 11110392 - 11110534
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttg 127  Q
    ||||||| ||||||||||| ||||||||||||| |||||||||||| || || ||| |||| || || || || |||||||||||| | |  ||||||||    
T  11110392 ggacattattctcaaaagtcagctttccctgatcaatgagcttcttcacgatatacttcaaagcataacacccctcgacatcatgacctaaggcaccttg 11110491  T
Q  128 atggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    ||| |||||||| ||||| ||||| | |||||| |||||||||    
T  11110492 atgaaaatcacatttgagatcagacctgaaccttggaggcaac 11110534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 28 - 170
Target Start/End: Original strand, 18277095 - 18277237
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttg 127  Q
    ||||||| ||||||||||| ||||||||||||| |||||||||||| || || ||| |||| || || || || |||||||||||| | |  ||||||||    
T  18277095 ggacattattctcaaaagtcagctttccctgatcaatgagcttcttcacgatatacttcaaagcataacacccctcgacatcatgacctaaggcaccttg 18277194  T
Q  128 atggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    ||| |||||||| ||||| ||||| | |||||| |||||||||    
T  18277195 atgaaaatcacatttgagatcagacctgaaccttggaggcaac 18277237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 28 - 170
Target Start/End: Original strand, 18292396 - 18292538
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttg 127  Q
    ||||||| ||||||||||| ||||||||||||| |||||||||||| || || ||| |||| || || || || |||||||||||| | |  ||||||||    
T  18292396 ggacattattctcaaaagtcagctttccctgatcaatgagcttcttcacgatatacttcaaagcataacacccctcgacatcatgacctaaggcaccttg 18292495  T
Q  128 atggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    ||| |||||||| ||||| ||||| | |||||| |||||||||    
T  18292496 atgaaaatcacatttgagatcagacctgaaccttggaggcaac 18292538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 28 - 170
Target Start/End: Original strand, 18307697 - 18307839
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttg 127  Q
    ||||||| ||||||||||| ||||||||||||| |||||||||||| || || ||| |||| || || || || |||||||||||| | |  ||||||||    
T  18307697 ggacattattctcaaaagtcagctttccctgatcaatgagcttcttcacgatatacttcaaagcataacacccctcgacatcatgacctaaggcaccttg 18307796  T
Q  128 atggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    ||| |||||||| ||||| ||||| | |||||| |||||||||    
T  18307797 atgaaaatcacatttgagatcagacctgaaccttggaggcaac 18307839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 170 - 284
Target Start/End: Complemental strand, 18329385 - 18329271
Alignment:
Q  170 cagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttcttt 269  Q
    |||||||||||||  |||||| || ||| ||||||| ||||| | ||  ||||||||||||||||||||| | |||||||||||||||||| ||||| ||    
T  18329385 cagagcagtcatgacatcattagctttagccaattcctcccttagagtggctaactcggtacggagctgagcgttctcttcttccatagcctttttcctt 18329286  T
Q  270 cttctgtattctctg 284  Q
    ||||| |||||||||    
T  18329285 cttctatattctctg 18329271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 28 - 166
Target Start/End: Original strand, 29665013 - 29665151
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttg 127  Q
    ||||||| ||||||||||| ||||||||||||| |||||||||||| || || ||| |||| || || || || |||||||||||| | | |||||||||    
T  29665013 ggacattattctcaaaagtcagctttccctgatcaatgagcttcttcacgatatacttcaaagcataacacccctcgacatcatgacctaaagcaccttg 29665112  T
Q  128 atggaaatcacacttgaggtcagaacggaacctgggagg 166  Q
    ||| |||||||| || || ||||| |||||||| |||||    
T  29665113 atgaaaatcacatttaagatcagagcggaaccttggagg 29665151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 171 - 284
Target Start/End: Complemental strand, 5012422 - 5012309
Alignment:
Q  171 agagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttctttc 270  Q
    ||||||||||||   ||||| || ||| ||||||| ||| | | ||| ||||||||||| || |||||| | ||||||||||||||||||||||||||||    
T  5012422 agagcagtcatgacgtcattagctttagccaattcctcctttagagaggctaactcggtgcgaagctgagcgttctcttcttccatagcccttttctttc 5012323  T
Q  271 ttctgtattctctg 284  Q
    ||||||||||||||    
T  5012322 ttctgtattctctg 5012309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 171 - 284
Target Start/End: Original strand, 5610870 - 5610983
Alignment:
Q  171 agagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttctttc 270  Q
    ||||||||||||   ||||| || ||| ||||||| ||| | | ||| ||||||||||| || |||||| | ||||||||||||||||||||||||||||    
T  5610870 agagcagtcatgacgtcattagctttagccaattcctcctttagagaggctaactcggtgcgaagctgagcgttctcttcttccatagcccttttctttc 5610969  T
Q  271 ttctgtattctctg 284  Q
    ||||||||||||||    
T  5610970 ttctgtattctctg 5610983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 171 - 284
Target Start/End: Complemental strand, 24326869 - 24326756
Alignment:
Q  171 agagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttctttc 270  Q
    ||||||||||||   ||||| || ||| ||||||| ||| | | ||| ||||||||||| || |||||| | ||||||||||||||||||||||||||||    
T  24326869 agagcagtcatgacgtcattagctttagccaattcctcctttagagaggctaactcggtgcgaagctgagcgttctcttcttccatagcccttttctttc 24326770  T
Q  271 ttctgtattctctg 284  Q
    ||||||||||||||    
T  24326769 ttctgtattctctg 24326756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 167 - 284
Target Start/End: Complemental strand, 28020010 - 28019893
Alignment:
Q  167 caacagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttc 266  Q
    ||||||||||||||| | |||||  || ||  ||||||| ||||| ||||| || || ||||||||||||||    ||||||||||||||||||||||||    
T  28020010 caacagagcagtcatagcatcatgagctttggccaattcctcccttaaagatgccaattcggtacggagctgcgtgttctcttcttccatagcccttttc 28019911  T
Q  267 tttcttctgtattctctg 284  Q
    ||||||||||||||||||    
T  28019910 tttcttctgtattctctg 28019893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 171 - 284
Target Start/End: Complemental strand, 28338013 - 28337900
Alignment:
Q  171 agagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttctttc 270  Q
    ||||||||||||   ||||| || ||| ||||||| ||| | | ||| ||||||||||| || |||||| | ||||||||||||||||||||||||||||    
T  28338013 agagcagtcatgacgtcattagctttagccaattcctcctttagagaggctaactcggtgcgaagctgagcgttctcttcttccatagcccttttctttc 28337914  T
Q  271 ttctgtattctctg 284  Q
    ||||||||||||||    
T  28337913 ttctgtattctctg 28337900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 171 - 284
Target Start/End: Original strand, 29150303 - 29150415
Alignment:
Q  171 agagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttctttc 270  Q
    ||||||||||||  |||||| || ||| ||||||| ||||| | ||  ||||||||||||||||||||| | |||||||||||||||| |||||| ||||    
T  29150303 agagcagtcatgacatcattagctttagccaattcctcccttagagtggctaactcggtacggagctgagcgttctcttcttccatag-ccttttttttc 29150401  T
Q  271 ttctgtattctctg 284  Q
    ||||||||||||||    
T  29150402 ttctgtattctctg 29150415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 171 - 284
Target Start/End: Original strand, 31966021 - 31966134
Alignment:
Q  171 agagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttctttc 270  Q
    ||||||||||||   ||||| || ||| ||||||| ||| | | ||| ||||||||||| || |||||| | ||||||||||||||||||||||||||||    
T  31966021 agagcagtcatgacgtcattagctttagccaattcctcctttagagaggctaactcggtgcgaagctgagcgttctcttcttccatagcccttttctttc 31966120  T
Q  271 ttctgtattctctg 284  Q
    ||||||||||||||    
T  31966121 ttctgtattctctg 31966134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 30 - 170
Target Start/End: Original strand, 6542507 - 6542647
Alignment:
Q  30 acattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttgat 129  Q
    ||||||||||||||||| ||||||||||||| |||||||||||| || || ||| |||| || || || || |||||||||||| | |  ||||||||||    
T  6542507 acattgttctcaaaagtcagctttccctgatcaatgagcttcttcacgatatacttcaaagcataacacccctcgacatcatgacctaaggcaccttgat 6542606  T
Q  130 ggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    | || ||||| ||||| ||||| | |||||| |||||||||    
T  6542607 gaaagtcacatttgagatcagacctgaaccttggaggcaac 6542647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 30 - 170
Target Start/End: Original strand, 22870901 - 22871041
Alignment:
Q  30 acattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttgat 129  Q
    ||||| ||||||||||| ||||||||||||| |||||||||||| || || ||| |||| || || || || |||||||||||| | |  ||||||||||    
T  22870901 acattattctcaaaagtcagctttccctgatcaatgagcttcttcacgatatacttcaaagcataacacccctcgacatcatgacctaaggcaccttgat 22871000  T
Q  130 ggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    | |||||||| ||||| ||||| | |||||| |||||||||    
T  22871001 gaaaatcacatttgagatcagacctgaaccttggaggcaac 22871041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 30 - 170
Target Start/End: Original strand, 22885960 - 22886100
Alignment:
Q  30 acattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttgat 129  Q
    ||||| ||||||||||| ||||||||||||| |||||||||||| || || ||| |||| || || || || |||||||||||| | |  ||||||||||    
T  22885960 acattattctcaaaagtcagctttccctgatcaatgagcttcttcacgatatacttcaaagcataacacccctcgacatcatgacctaaggcaccttgat 22886059  T
Q  130 ggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    | |||||||| ||||| ||||| | |||||| |||||||||    
T  22886060 gaaaatcacatttgagatcagacctgaaccttggaggcaac 22886100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 170 - 277
Target Start/End: Original strand, 17994653 - 17994760
Alignment:
Q  170 cagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttcttt 269  Q
    |||||||||||||  |||||| || ||| ||||||| ||||| | ||  ||||||||||||||||||||| | |||||||||||||||||| ||||| ||    
T  17994653 cagagcagtcatgacatcattagctttagccaattcctcccttagagtggctaactcggtacggagctgagcgttctcttcttccatagcctttttcctt 17994752  T
Q  270 cttctgta 277  Q
    ||||||||    
T  17994753 cttctgta 17994760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 28 - 170
Target Start/End: Complemental strand, 4417134 - 4416992
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttg 127  Q
    ||||||| ||||||||||| |||||||| |||| |||||||||||| ||||| ||| |||| || || || || |||||||||||| | |  ||||| ||    
T  4417134 ggacattattctcaaaagtcagctttccttgatcaatgagcttcttcacaatatacttcaaagcataacacccctcgacatcatgacctaaggcaccctg 4417035  T
Q  128 atggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    ||| |||||||| ||||| ||||| | |||||| |||||||||    
T  4417034 atgaaaatcacatttgagatcagacctgaaccttggaggcaac 4416992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 28 - 170
Target Start/End: Original strand, 4796696 - 4796838
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttg 127  Q
    ||||||| ||||||||||| |||||||| |||| ||||||||| || || || ||| |||| || ||||| || |||||||||||| |||| || |||||    
T  4796696 ggacattattctcaaaagtcagctttccttgatcaatgagctttttcacgatatacttcaaagcatagcacccctcgacatcatgacccagggcgccttg 4796795  T
Q  128 atggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    ||| |||||||| ||||| || || | |||||| |||||||||    
T  4796796 atgaaaatcacatttgagatcggacctgaaccttggaggcaac 4796838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 170 - 256
Target Start/End: Complemental strand, 8294686 - 8294600
Alignment:
Q  170 cagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccat 256  Q
    |||||| ||||||  |||||| |||||| ||||||||||||| ||||  ||||||||||||||||||||| ||||||||||||||||    
T  8294686 cagagcggtcatgacatcattagccttagccaattcttcccttaaagtggctaactcggtacggagctgagcattctcttcttccat 8294600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 28 - 166
Target Start/End: Original strand, 20576890 - 20577028
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttg 127  Q
    ||||||| ||||||||||| ||||||||||||| |||||||||||| || || ||| |||| || || || || |||||||||||| | |  ||||||||    
T  20576890 ggacattattctcaaaagtcagctttccctgatcaatgagcttcttcacgatatacttcaaagcataacacccctcgacatcatgacctaaggcaccttg 20576989  T
Q  128 atggaaatcacacttgaggtcagaacggaacctgggagg 166  Q
    ||| |||||||| || || ||||| |||||||| |||||    
T  20576990 atgaaaatcacatttaagatcagagcggaaccttggagg 20577028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 28 - 170
Target Start/End: Original strand, 28115997 - 28116139
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttg 127  Q
    ||||||| |||||||| || |||||||| |||| |||||||||||| || || ||| |||| || || || || |||||||||||| | | |||||||||    
T  28115997 ggacattattctcaaatgtcagctttccttgatcaatgagcttcttcacgatatacttcaaagcataacacccctcgacatcatgacctaaagcaccttg 28116096  T
Q  128 atggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    ||| |||||||| ||||| ||||| | |||||| |||||||||    
T  28116097 atgaaaatcacatttgagatcagacctgaaccttggaggcaac 28116139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 170 - 284
Target Start/End: Original strand, 36998636 - 36998750
Alignment:
Q  170 cagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttcttt 269  Q
    |||||||||||||   ||||| || ||| ||||||| ||||| | ||  ||||| ||||| || |||||| | |||||||||||||||||||||||||||    
T  36998636 cagagcagtcatgacgtcattagctttagccaattcctcccttagagtggctaattcggtgcgaagctgagcgttctcttcttccatagcccttttcttt 36998735  T
Q  270 cttctgtattctctg 284  Q
    |||||||||||||||    
T  36998736 cttctgtattctctg 36998750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 28 - 170
Target Start/End: Complemental strand, 48466142 - 48466000
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttg 127  Q
    ||||||| ||||||||||| |||||||| |||| |||||||||||| || || ||| |||| || || || || |||||||||||| | |  ||||||||    
T  48466142 ggacattattctcaaaagtcagctttccttgatcaatgagcttcttcacgatatacttcaaagcataacacccctcgacatcatgacctaaggcaccttg 48466043  T
Q  128 atggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    ||| |||||||| ||||| ||||| | |||||| |||||||||    
T  48466042 atgaaaatcacatttgagatcagacctgaaccttggaggcaac 48466000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 171 - 284
Target Start/End: Complemental strand, 4415626 - 4415513
Alignment:
Q  171 agagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttctttc 270  Q
    ||||||||||||   ||||| || ||| ||||||| ||| | | ||| ||||||||||| || |||||| | ||||||||||||||||||||||| ||||    
T  4415626 agagcagtcatgacgtcattagctttagccaattcctcctttagagaggctaactcggtgcgaagctgagcgttctcttcttccatagcccttttttttc 4415527  T
Q  271 ttctgtattctctg 284  Q
    ||||||||||||||    
T  4415526 ttctgtattctctg 4415513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 170 - 259
Target Start/End: Complemental strand, 4886221 - 4886132
Alignment:
Q  170 cagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagc 259  Q
    |||||||||||||  |||||| |||||| ||||||||||||| | ||  ||||||||||||||||||||| |||| ||||||||||||||    
T  4886221 cagagcagtcatgacatcattagccttagccaattcttcccttagagtggctaactcggtacggagctgagcattttcttcttccatagc 4886132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 167 - 284
Target Start/End: Original strand, 6544000 - 6544117
Alignment:
Q  167 caacagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttc 266  Q
    ||||||||||||||| | |||||  || ||  ||||||| ||||| ||||| || || |||||||| |||||    ||||||||||||||||||||||||    
T  6544000 caacagagcagtcatagcatcatgagctttggccaattcctcccttaaagatgccaattcggtacgaagctgtgtgttctcttcttccatagcccttttc 6544099  T
Q  267 tttcttctgtattctctg 284  Q
    ||||||||||||||||||    
T  6544100 tttcttctgtattctctg 6544117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 219 - 284
Target Start/End: Complemental strand, 7995224 - 7995159
Alignment:
Q  219 gctaactcggtacggagctgaacattctcttcttccatagcccttttctttcttctgtattctctg 284  Q
    ||||||||||| || |||||| | ||||||||||||||||||||||||||||||||||||||||||    
T  7995224 gctaactcggtgcgaagctgagcgttctcttcttccatagcccttttctttcttctgtattctctg 7995159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 219 - 284
Target Start/End: Complemental strand, 10641732 - 10641667
Alignment:
Q  219 gctaactcggtacggagctgaacattctcttcttccatagcccttttctttcttctgtattctctg 284  Q
    ||||||||||| || |||||| | ||||||||||||||||||||||||||||||||||||||||||    
T  10641732 gctaactcggtgcgaagctgagcgttctcttcttccatagcccttttctttcttctgtattctctg 10641667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 170 - 259
Target Start/End: Original strand, 16628031 - 16628119
Alignment:
Q  170 cagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagc 259  Q
    |||||||||||| || |||||||||||| | ||||||||||||| |||||||||||||||| |||||||| |||| || |||||||||||    
T  16628031 cagagcagtcatagtgtcattggccttatc-aattcttccctcagagaagctaactcggtatggagctgagcattttcctcttccatagc 16628119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 171 - 284
Target Start/End: Original strand, 17986504 - 17986617
Alignment:
Q  171 agagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttctttc 270  Q
    ||||||||||||   ||||| || ||| ||||||| ||| | | ||| |||| |||||| || |||||| | ||||||||||||||||||||||||||||    
T  17986504 agagcagtcatgacgtcattagctttagccaattcctcctttagagaggctacctcggtgcgaagctgagcgttctcttcttccatagcccttttctttc 17986603  T
Q  271 ttctgtattctctg 284  Q
    ||||||||||||||    
T  17986604 ttctgtattctctg 17986617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 171 - 284
Target Start/End: Complemental strand, 18223901 - 18223788
Alignment:
Q  171 agagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttctttc 270  Q
    ||||||||||||   ||||| || ||| ||||||| ||| | | ||| |||| |||||| || |||||| | ||||||||||||||||||||||||||||    
T  18223901 agagcagtcatgacgtcattagctttagccaattcctcctttagagaggctacctcggtgcgaagctgagcgttctcttcttccatagcccttttctttc 18223802  T
Q  271 ttctgtattctctg 284  Q
    ||||||||||||||    
T  18223801 ttctgtattctctg 18223788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 167 - 284
Target Start/End: Complemental strand, 18241459 - 18241342
Alignment:
Q  167 caacagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttc 266  Q
    ||||||||||||||| | |||||  || ||  ||||||| ||||| ||||| || || |||||||| |||||    ||||||||||||||||||||||||    
T  18241459 caacagagcagtcatagcatcatgagctttggccaattcctcccttaaagatgccaattcggtacgaagctgcgtgttctcttcttccatagcccttttc 18241360  T
Q  267 tttcttctgtattctctg 284  Q
    ||||||||||||||||||    
T  18241359 tttcttctgtattctctg 18241342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 167 - 284
Target Start/End: Original strand, 22872400 - 22872517
Alignment:
Q  167 caacagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttc 266  Q
    ||||||||||||||| | |||||  || ||  ||||||| ||||| ||||| || || |||||||| |||||    ||||||||||||||||||||||||    
T  22872400 caacagagcagtcatagcatcatgagctttggccaattcctcccttaaagatgccaattcggtacgaagctgcgtgttctcttcttccatagcccttttc 22872499  T
Q  267 tttcttctgtattctctg 284  Q
    ||||||||||||||||||    
T  22872500 tttcttctgtattctctg 22872517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 167 - 284
Target Start/End: Original strand, 22887459 - 22887576
Alignment:
Q  167 caacagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttc 266  Q
    ||||||||||||||| | |||||  || ||  ||||||| ||||| ||||| || || |||||||| |||||    ||||||||||||||||||||||||    
T  22887459 caacagagcagtcatagcatcatgagctttggccaattcctcccttaaagatgccaattcggtacgaagctgcgtgttctcttcttccatagcccttttc 22887558  T
Q  267 tttcttctgtattctctg 284  Q
    ||||||||||||||||||    
T  22887559 tttcttctgtattctctg 22887576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 225 - 284
Target Start/End: Original strand, 28117541 - 28117600
Alignment:
Q  225 tcggtacggagctgaacattctcttcttccatagcccttttctttcttctgtattctctg 284  Q
    |||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||    
T  28117541 tcggtacggagctgagagttctcttcttccatagcccttttctttcttctgtattctctg 28117600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 170 - 256
Target Start/End: Original strand, 4798200 - 4798286
Alignment:
Q  170 cagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccat 256  Q
    |||||||||||||  |||||| || ||| ||||||||||||| | ||  ||||||||||||||||||||| ||||||||||||||||    
T  4798200 cagagcagtcatgacatcattagctttagccaattcttcccttagagtggctaactcggtacggagctgagcattctcttcttccat 4798286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 28 - 170
Target Start/End: Complemental strand, 8211953 - 8211811
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttg 127  Q
    ||||||| ||||||||||| ||||| || |||| |||||||||||| || || ||| |||| || || || || |||||||||||| | |  ||||||||    
T  8211953 ggacattattctcaaaagtcagcttcccttgatcaatgagcttcttcacgatatacttcaaagcataacacccctcgacatcatgacctaaggcaccttg 8211854  T
Q  128 atggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    ||| |||||||| ||||| ||||| | |||||| |||||||||    
T  8211853 atgaaaatcacatttgagatcagacctgaaccttggaggcaac 8211811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 28 - 170
Target Start/End: Complemental strand, 10396348 - 10396206
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttg 127  Q
    ||||||| |||||||| || ||||| || |||| |||||||||||| || || ||| |||| || || || || |||||||||||| | || ||||||||    
T  10396348 ggacattattctcaaaggtcagcttcccttgatcaatgagcttcttcacgatatacttcaaagcataacacccctcgacatcatgacctagggcaccttg 10396249  T
Q  128 atggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    ||| |||||||| ||||| ||||| | |||||| |||||||||    
T  10396248 atgaaaatcacatttgagatcagacctgaaccttggaggcaac 10396206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 170 - 256
Target Start/End: Complemental strand, 18049973 - 18049887
Alignment:
Q  170 cagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccat 256  Q
    |||||||||||||  |||||| || ||| ||||||||||||| | ||  ||||||||||||||||||||| ||||||||||||||||    
T  18049973 cagagcagtcatgacatcattagctttagccaattcttcccttagagtggctaactcggtacggagctgagcattctcttcttccat 18049887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 28 - 170
Target Start/End: Original strand, 36997120 - 36997262
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttg 127  Q
    ||||||| ||||||||||| ||||| || |||| |||||||||||| ||||| ||| |||| || || || || |||||||||||| | |  ||||||||    
T  36997120 ggacattattctcaaaagtcagcttcccttgatcaatgagcttcttcacaatatacttcaaagcataacacccctcgacatcatgacctaaggcaccttg 36997219  T
Q  128 atggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    ||| || ||||| ||||| ||||| | |||||| |||||||||    
T  36997220 atgaaagtcacatttgagatcagacctgaaccttggaggcaac 36997262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 167 - 284
Target Start/End: Complemental strand, 5465717 - 5465600
Alignment:
Q  167 caacagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttc 266  Q
    ||||||||||||||| | |||||  || ||  ||||||| ||||| ||||| || || |||||||| |||||    ||||||||||||||||||||||||    
T  5465717 caacagagcagtcatagcatcatgagctttggccaattcctcccttaaagatgccaattcggtacgaagctgcgtgttctcttcttccatagcccttttc 5465618  T
Q  267 tttcttctgtattctctg 284  Q
    |||||||||| |||||||    
T  5465617 tttcttctgtgttctctg 5465600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 167 - 284
Target Start/End: Original strand, 5597892 - 5598009
Alignment:
Q  167 caacagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttc 266  Q
    ||||||||||||||| | |||||  || ||  ||||||| ||| | ||||| || || ||||||||||| ||  | ||||||||||||||||||||||||    
T  5597892 caacagagcagtcatagcatcatgagctttggccaattcctcctttaaagatgccaattcggtacggagttgcgcgttctcttcttccatagcccttttc 5597991  T
Q  267 tttcttctgtattctctg 284  Q
    |||||||| |||||||||    
T  5597992 tttcttctatattctctg 5598009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 167 - 284
Target Start/End: Complemental strand, 10394868 - 10394751
Alignment:
Q  167 caacagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttc 266  Q
    ||||||||||||||| | |||||  || ||  ||||||| ||| | ||||| || || |||||||| |||||    ||||||||||||||||||||||||    
T  10394868 caacagagcagtcatagcatcatgagctttggccaattcctcctttaaagatgccaattcggtacgaagctgcgtgttctcttcttccatagcccttttc 10394769  T
Q  267 tttcttctgtattctctg 284  Q
    ||||||||||||||||||    
T  10394768 tttcttctgtattctctg 10394751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 167 - 284
Target Start/End: Original strand, 20578388 - 20578505
Alignment:
Q  167 caacagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttc 266  Q
    ||||||||||||||| | |||||  || ||  ||||||| ||| | ||||| || || ||||||||||| ||  | ||||||||||||||||||||||||    
T  20578388 caacagagcagtcatagcatcatgagctttggccaattcctcctttaaagatgccaattcggtacggagttgcgcgttctcttcttccatagcccttttc 20578487  T
Q  267 tttcttctgtattctctg 284  Q
    |||||||| |||||||||    
T  20578488 tttcttctatattctctg 20578505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 167 - 284
Target Start/End: Original strand, 22389101 - 22389218
Alignment:
Q  167 caacagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttc 266  Q
    ||||||||||||||| | |||||  || ||| ||||||| ||||| | ||| || || ||||||||||||||    |||||||||||||||||| |||||    
T  22389101 caacagagcagtcatagcatcatgagctttagccaattcctcccttagagatgccaattcggtacggagctgcgtgttctcttcttccatagcctttttc 22389200  T
Q  267 tttcttctgtattctctg 284  Q
     |||||||||||||||||    
T  22389201 cttcttctgtattctctg 22389218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 167 - 284
Target Start/End: Original strand, 29666511 - 29666628
Alignment:
Q  167 caacagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttc 266  Q
    ||||||||||||||| | |||||  || ||  ||||||| ||||| ||||| || || || ||||| |||||    ||||||||||||||||||||||||    
T  29666511 caacagagcagtcatagcatcatgagctttggccaattcctcccttaaagatgccaattcagtacgaagctgcgtgttctcttcttccatagcccttttc 29666610  T
Q  267 tttcttctgtattctctg 284  Q
    ||||||||||||||||||    
T  29666611 tttcttctgtattctctg 29666628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 167 - 284
Target Start/End: Complemental strand, 32437889 - 32437772
Alignment:
Q  167 caacagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttc 266  Q
    ||||||||||||||| | |||||  || ||  ||||||| ||||| | ||| || || ||||||||||||||    |||||||||||||||||| |||||    
T  32437889 caacagagcagtcatagcatcatgagctttggccaattcctcccttagagatgccaattcggtacggagctgcgtgttctcttcttccatagcctttttc 32437790  T
Q  267 tttcttctgtattctctg 284  Q
    ||||||||||||||||||    
T  32437789 tttcttctgtattctctg 32437772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 167 - 284
Target Start/End: Complemental strand, 47022185 - 47022068
Alignment:
Q  167 caacagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttc 266  Q
    ||||||||||||||| | |||||  || ||  ||||||| ||||| ||||| || || || ||||| |||||    ||||||||||||||||||||||||    
T  47022185 caacagagcagtcatagcatcatgagctttggccaattcctcccttaaagatgccaattcagtacgaagctgtgtgttctcttcttccatagcccttttc 47022086  T
Q  267 tttcttctgtattctctg 284  Q
    ||||||||||||||||||    
T  47022085 tttcttctgtattctctg 47022068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 168 - 284
Target Start/End: Original strand, 4348211 - 4348327
Alignment:
Q  168 aacagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttct 267  Q
    |||||||||||||| | |||||  || ||  ||||||| ||||| | ||| || || |||||||| |||||    |||||||||||||||||||||||||    
T  4348211 aacagagcagtcatagcatcatgagctttggccaattcctcccttagagatgccaattcggtacgaagctgtgtgttctcttcttccatagcccttttct 4348310  T
Q  268 ttcttctgtattctctg 284  Q
    |||||||||||||||||    
T  4348311 ttcttctgtattctctg 4348327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 28 - 168
Target Start/End: Complemental strand, 4721846 - 4721706
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttg 127  Q
    ||||||| |||| |||||| |||||||| |||| |||||| || || || || ||| |||| | |||||| || |||||||||||| |||| || |||||    
T  4721846 ggacattattctaaaaagtcagctttccttgatcaatgagatttttcacgatatacttcaaagtgtagcacccctcgacatcatgacccagggcgccttg 4721747  T
Q  128 atggaaatcacacttgaggtcagaacggaacctgggaggca 168  Q
    ||| |||||||| |||||||| || | |||||| |||||||    
T  4721746 atgaaaatcacatttgaggtcggacctgaaccttggaggca 4721706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 28 - 168
Target Start/End: Complemental strand, 35880981 - 35880841
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttg 127  Q
    ||||||| ||||||||||| |||||||| |||| ||||||||| || || || ||| |||| || ||||| || |||||||||||| | || || |||||    
T  35880981 ggacattattctcaaaagtcagctttccttgatcaatgagctttttcacgatatacttcaaagcatagcacccctcgacatcatgacctagggcgccttg 35880882  T
Q  128 atggaaatcacacttgaggtcagaacggaacctgggaggca 168  Q
    ||| |||||||| ||||| || || | |||||| |||||||    
T  35880881 atgaaaatcacatttgagatcggacctgaaccttggaggca 35880841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 30 - 170
Target Start/End: Complemental strand, 51782236 - 51782096
Alignment:
Q  30 acattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttgat 129  Q
    ||||| ||||||||||| |||||||||||||  ||||||||||| || || ||| |||| || || || || |||||||||||| | |  ||||||||||    
T  51782236 acattattctcaaaagtcagctttccctgatcgatgagcttcttcacgatatacttcaaagcataacacccctcgacatcatgacctaaggcaccttgat 51782137  T
Q  130 ggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    | || ||||| ||||| ||||| | |||||| |||||||||    
T  51782136 gaaagtcacatttgagatcagacctgaaccttggaggcaac 51782096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 225 - 284
Target Start/End: Complemental strand, 7071886 - 7071827
Alignment:
Q  225 tcggtacggagctgaacattctcttcttccatagcccttttctttcttctgtattctctg 284  Q
    ||||||||||||||    ||||||||||||||||||||||||||||||||||||||||||    
T  7071886 tcggtacggagctgcgtgttctcttcttccatagcccttttctttcttctgtattctctg 7071827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 225 - 284
Target Start/End: Original strand, 18278636 - 18278695
Alignment:
Q  225 tcggtacggagctgaacattctcttcttccatagcccttttctttcttctgtattctctg 284  Q
    ||||||||||||||    ||||||||||||||||||||||||||||||||||||||||||    
T  18278636 tcggtacggagctgcgtgttctcttcttccatagcccttttctttcttctgtattctctg 18278695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 225 - 284
Target Start/End: Original strand, 18293937 - 18293996
Alignment:
Q  225 tcggtacggagctgaacattctcttcttccatagcccttttctttcttctgtattctctg 284  Q
    ||||||||||||||    ||||||||||||||||||||||||||||||||||||||||||    
T  18293937 tcggtacggagctgcgtgttctcttcttccatagcccttttctttcttctgtattctctg 18293996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 225 - 284
Target Start/End: Original strand, 18309238 - 18309297
Alignment:
Q  225 tcggtacggagctgaacattctcttcttccatagcccttttctttcttctgtattctctg 284  Q
    ||||||||||||||    ||||||||||||||||||||||||||||||||||||||||||    
T  18309238 tcggtacggagctgcgtgttctcttcttccatagcccttttctttcttctgtattctctg 18309297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #92
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 31 - 170
Target Start/End: Complemental strand, 21674905 - 21674766
Alignment:
Q  31 cattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttgatg 130  Q
    |||| ||||||||||| ||||| || |||| |||||||||||| || || ||| |||| || || || || |||||||||||| | |  |||||||||||    
T  21674905 cattattctcaaaagtcagcttcccttgatcaatgagcttcttcacgatatacttcaaagcataacacccctcgacatcatgacctaaggcaccttgatg 21674806  T
Q  131 gaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
     |||||||| ||||| ||||| | |||||| |||||||||    
T  21674805 aaaatcacatttgagatcagacctgaaccttggaggcaac 21674766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #93
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 167 - 281
Target Start/End: Complemental strand, 4891945 - 4891831
Alignment:
Q  167 caacagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttc 266  Q
    ||||||||||||||| | |||||  || ||  ||||||| ||||| | ||| || || ||||||||||||||    |||||||||||||||||| |||||    
T  4891945 caacagagcagtcatagcatcatgagctttggccaattcctcccttagagatgccaattcggtacggagctgcgtgttctcttcttccatagcctttttc 4891846  T
Q  267 tttcttctgtattct 281  Q
    |||||||||||||||    
T  4891845 tttcttctgtattct 4891831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #94
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 28 - 170
Target Start/End: Complemental strand, 5713442 - 5713300
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttg 127  Q
    |||| |||||||||||||| ||||| || |||| |||||||||||| || || ||| |||| || || || || |||||||||||| | |  ||||||||    
T  5713442 ggacgttgttctcaaaagtcagcttcccttgatcaatgagcttcttcacgatatacttcaaagcataacacccctcgacatcatgacctaaggcaccttg 5713343  T
Q  128 atggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    ||| || ||||| ||||| ||||| | |||||| |||||||||    
T  5713342 atgaaagtcacatttgagatcagacctgaaccttggaggcaac 5713300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #95
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 28 - 170
Target Start/End: Complemental strand, 5724352 - 5724210
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttg 127  Q
    |||| |||||||||||||| ||||| || |||| |||||||||||| || || ||| |||| || || || || |||||||||||| | |  ||||||||    
T  5724352 ggacgttgttctcaaaagtcagcttcccttgatcaatgagcttcttcacgatatacttcaaagcataacacccctcgacatcatgacctaaggcaccttg 5724253  T
Q  128 atggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    ||| || ||||| ||||| ||||| | |||||| |||||||||    
T  5724252 atgaaagtcacatttgagatcagacctgaaccttggaggcaac 5724210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #96
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 28 - 170
Target Start/End: Original strand, 5757125 - 5757267
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttg 127  Q
    |||| |||||||||||||| ||||| || |||| |||||||||||| || || ||| |||| || || || || |||||||||||| | |  ||||||||    
T  5757125 ggacgttgttctcaaaagtcagcttcccttgatcaatgagcttcttcacgatatacttcaaagcataacacccctcgacatcatgacctaaggcaccttg 5757224  T
Q  128 atggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    ||| || ||||| ||||| ||||| | |||||| |||||||||    
T  5757225 atgaaagtcacatttgagatcagacctgaaccttggaggcaac 5757267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #97
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 28 - 170
Target Start/End: Original strand, 5768016 - 5768158
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttg 127  Q
    |||| |||||||||||||| ||||| || |||| |||||||||||| || || ||| |||| || || || || |||||||||||| | |  ||||||||    
T  5768016 ggacgttgttctcaaaagtcagcttcccttgatcaatgagcttcttcacgatatacttcaaagcataacacccctcgacatcatgacctaaggcaccttg 5768115  T
Q  128 atggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    ||| || ||||| ||||| ||||| | |||||| |||||||||    
T  5768116 atgaaagtcacatttgagatcagacctgaaccttggaggcaac 5768158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #98
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 170 - 256
Target Start/End: Original strand, 8302808 - 8302894
Alignment:
Q  170 cagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccat 256  Q
    |||||| ||||||  |||||| |||||| ||||||||||||| | ||  ||||||||||||||||||||| |||| |||||||||||    
T  8302808 cagagctgtcatgacatcattagccttagccaattcttcccttagagtggctaactcggtacggagctgagcattttcttcttccat 8302894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #99
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 170 - 256
Target Start/End: Original strand, 14448464 - 14448550
Alignment:
Q  170 cagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccat 256  Q
    |||||||||||||  |||||| || ||  ||||||||||||| | ||  ||||||||||||||||||||| ||||||||||||||||    
T  14448464 cagagcagtcatgacatcattagctttggccaattcttcccttagagtggctaactcggtacggagctgagcattctcttcttccat 14448550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #100
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 170 - 284
Target Start/End: Complemental strand, 51780722 - 51780608
Alignment:
Q  170 cagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttcttt 269  Q
    |||||||||||| | |||||  || ||  ||||||| ||||| | ||| || || |||||||| |||||    |||||||||||||||||||||||||||    
T  51780722 cagagcagtcatagcatcatgagctttggccaattcctcccttagagatgccaattcggtacgaagctgtgtgttctcttcttccatagcccttttcttt 51780623  T
Q  270 cttctgtattctctg 284  Q
    |||||||||||||||    
T  51780622 cttctgtattctctg 51780608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #101
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 170 - 284
Target Start/End: Complemental strand, 51795809 - 51795695
Alignment:
Q  170 cagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttcttt 269  Q
    |||||||||||| | |||||  || ||  ||||||| ||||| | ||| || || |||||||| |||||    |||||||||||||||||||||||||||    
T  51795809 cagagcagtcatagcatcatgagctttggccaattcctcccttagagatgccaattcggtacgaagctgtgtgttctcttcttccatagcccttttcttt 51795710  T
Q  270 cttctgtattctctg 284  Q
    |||||||||||||||    
T  51795709 cttctgtattctctg 51795695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #102
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 243 - 284
Target Start/End: Complemental strand, 8210397 - 8210356
Alignment:
Q  243 ttctcttcttccatagcccttttctttcttctgtattctctg 284  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  8210397 ttctcttcttccatagcccttttctttcttctgtattctctg 8210356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #103
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 167 - 284
Target Start/End: Original strand, 11111887 - 11112004
Alignment:
Q  167 caacagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttc 266  Q
    ||||||||||||||| | |||||  || ||  ||||||| ||| | ||||| || || ||||||||||| ||    ||||||||||||||||||||||||    
T  11111887 caacagagcagtcatagcatcatgagctttggccaattcctcctttaaagatgccaattcggtacggagttgtgtgttctcttcttccatagcccttttc 11111986  T
Q  267 tttcttctgtattctctg 284  Q
    || |||||||||||||||    
T  11111987 ttccttctgtattctctg 11112004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #104
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 167 - 284
Target Start/End: Complemental strand, 21673425 - 21673308
Alignment:
Q  167 caacagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttc 266  Q
    ||||||||||||||| | |||||  || ||  ||||||| ||| | ||||| || || ||||||||||| ||    ||||||||||||||||||||||||    
T  21673425 caacagagcagtcatagcatcatgagctttggccaattcctcctttaaagatgccaattcggtacggagttgtgtgttctcttcttccatagcccttttc 21673326  T
Q  267 tttcttctgtattctctg 284  Q
    || |||||||||||||||    
T  21673325 ttccttctgtattctctg 21673308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #105
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 167 - 284
Target Start/End: Complemental strand, 48464647 - 48464530
Alignment:
Q  167 caacagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttc 266  Q
    ||||||||||||||| | |||||  || ||  ||||||| ||| | ||||| || || ||||||||||| ||    ||||||||||||||||||||||||    
T  48464647 caacagagcagtcatagcatcatgagctttggccaattcctcctttaaagatgccaattcggtacggagttgtgtgttctcttcttccatagcccttttc 48464548  T
Q  267 tttcttctgtattctctg 284  Q
    || |||||||||||||||    
T  48464547 ttccttctgtattctctg 48464530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #106
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 30 - 170
Target Start/End: Original strand, 5609367 - 5609507
Alignment:
Q  30 acattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttgat 129  Q
    ||||| ||||||||||| ||||| || ||||  ||||||||||| || || ||| |||| || || || |||||||| |||||| | |  ||||||||||    
T  5609367 acattattctcaaaagtcagcttcccttgatcgatgagcttcttcacgatatacttcaaagcataacacccttcgacgtcatgacctaaggcaccttgat 5609466  T
Q  130 ggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    | |||||||| ||||| ||||| | |||||| |||||||||    
T  5609467 gaaaatcacatttgagatcagacctgaaccttggaggcaac 5609507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #107
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 30 - 170
Target Start/End: Complemental strand, 28339515 - 28339375
Alignment:
Q  30 acattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttgat 129  Q
    ||||| ||||||||||| ||||| || ||||  ||||||||||| || || ||| |||| || || || || ||||| |||||| | | |||||||||||    
T  28339515 acattattctcaaaagtcagcttcccttgatcgatgagcttcttcacgatatacttcaaagcataacacccctcgacgtcatgacctaaagcaccttgat 28339416  T
Q  130 ggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    | |||||||| ||||| ||||| | |||||| |||||||||    
T  28339415 gaaaatcacatttgagatcagacctgaaccttggaggcaac 28339375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #108
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 185 - 256
Target Start/End: Original strand, 15742636 - 15742707
Alignment:
Q  185 atcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccat 256  Q
    |||||| || ||| ||||||||||||| | ||  ||||||||||||||||||||| ||||||||||||||||    
T  15742636 atcattagctttagccaattcttcccttagagtggctaactcggtacggagctgagcattctcttcttccat 15742707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #109
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 28 - 170
Target Start/End: Complemental strand, 5467200 - 5467058
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttg 127  Q
    ||||||| ||||||||||| || || || |||| |||||||||||| || || ||| |||| || || || || |||||||||||| | |  ||||||||    
T  5467200 ggacattattctcaaaagtcagtttcccttgatcaatgagcttcttcacgatatacttcaaagcataacacccctcgacatcatgacctaaggcaccttg 5467101  T
Q  128 atggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    ||| || ||||| ||||| ||||| | |||||| |||||||||    
T  5467100 atgaaagtcacatttgagatcagacctgaaccttggaggcaac 5467058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #110
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 209 - 259
Target Start/End: Original strand, 16467862 - 16467912
Alignment:
Q  209 cctcaaagaagctaactcggtacggagctgaacattctcttcttccatagc 259  Q
    ||||| ||||||||||||||||||||||||| |||| ||||||||||||||    
T  16467862 cctcagagaagctaactcggtacggagctgagcattttcttcttccatagc 16467912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #111
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 28 - 166
Target Start/End: Complemental strand, 28021490 - 28021352
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttg 127  Q
    ||||||| ||||||||||| ||||| || |||| |||||||||||| || || ||| |||| || || || || |||||||||| | | |  ||||||||    
T  28021490 ggacattattctcaaaagtcagcttcccttgatcaatgagcttcttcacgatatacttcaaagcataacacccctcgacatcataacctaaggcaccttg 28021391  T
Q  128 atggaaatcacacttgaggtcagaacggaacctgggagg 166  Q
    ||| |||||||| ||||| ||||| | |||||| |||||    
T  28021390 atgaaaatcacatttgagatcagacctgaaccttggagg 28021352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #112
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 30 - 160
Target Start/End: Complemental strand, 51797326 - 51797196
Alignment:
Q  30 acattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttgat 129  Q
    ||||| ||||||||||| |||||||||||||  ||||||||||| || || ||| |||| || || || || |||||||||||| | |  ||||||||||    
T  51797326 acattattctcaaaagtcagctttccctgatcgatgagcttcttcacgatatacttcaaagcataacacccctcgacatcatgacctaaggcaccttgat 51797227  T
Q  130 ggaaatcacacttgaggtcagaacggaacct 160  Q
    | || ||||| ||||| ||||| | ||||||    
T  51797226 gaaagtcacatttgagatcagacctgaacct 51797196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #113
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 30 - 170
Target Start/End: Complemental strand, 5013925 - 5013785
Alignment:
Q  30 acattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttgat 129  Q
    ||||| ||||||||||| ||||| || ||||  ||||||||||| || || ||| |||| || || || || |||||||||||| | || ||||||||||    
T  5013925 acattattctcaaaagtcagcttcccttgatcgatgagcttcttcacgatatacttcaaagcataacacccctcgacatcatgacctagggcaccttgat 5013826  T
Q  130 ggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    | || || || ||||| ||||| | |||||| |||||||||    
T  5013825 gaaagtcgcatttgagatcagacctgaaccttggaggcaac 5013785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #114
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 30 - 170
Target Start/End: Original strand, 5596402 - 5596542
Alignment:
Q  30 acattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttgat 129  Q
    ||||| ||||||||||| ||||| || |||| |||||| ||||| || || ||| |||| || || || || |||||||||||| | |  ||||||||||    
T  5596402 acattattctcaaaagtcagcttcccttgatcaatgagtttcttcacgatatacttcaaagcataacacccctcgacatcatgacctaaggcaccttgat 5596501  T
Q  130 ggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    | || ||||| ||||| ||||| | |||||| |||||||||    
T  5596502 gaaagtcacatttgagatcagacctgaaccttggaggcaac 5596542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #115
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 30 - 170
Target Start/End: Original strand, 31964518 - 31964658
Alignment:
Q  30 acattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttgat 129  Q
    ||||| ||||||||||| ||||| || ||||  ||||||||||| || || ||| |||| || || || || ||||| |||||| | |  ||||||||||    
T  31964518 acattattctcaaaagtcagcttcccttgatcgatgagcttcttcacgatatacttcaaagcataacacccctcgacgtcatgacctaaggcaccttgat 31964617  T
Q  130 ggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    | |||||||| ||||| ||||| | |||||| |||||||||    
T  31964618 gaaaatcacatttgagatcagacctgaaccttggaggcaac 31964658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #116
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 30 - 170
Target Start/End: Complemental strand, 47023666 - 47023526
Alignment:
Q  30 acattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttgat 129  Q
    ||||| ||||||||||| ||||| || ||||  ||||||||||| || || ||| |||| || || || || |||||||||||| | || ||||||||||    
T  47023666 acattattctcaaaagtcagcttcccttgatcgatgagcttcttcacgatatacttcaaagcataacacccctcgacatcatgacctagggcaccttgat 47023567  T
Q  130 ggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    | || || || ||||| ||||| | |||||| |||||||||    
T  47023566 gaaagtcgcatttgagatcagacctgaaccttggaggcaac 47023526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #117
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 30 - 170
Target Start/End: Original strand, 50134116 - 50134256
Alignment:
Q  30 acattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttgat 129  Q
    ||||| ||||||||||| ||||| || ||||  ||||||||||| || || ||| |||| || || || || ||||| |||||| | |  ||||||||||    
T  50134116 acattattctcaaaagtcagcttcccttgatcgatgagcttcttcacgatatacttcaaagcataacacccctcgacgtcatgacctaaggcaccttgat 50134215  T
Q  130 ggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    | |||||||| ||||| ||||| | |||||| |||||||||    
T  50134216 gaaaatcacatttgagatcagacctgaaccttggaggcaac 50134256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #118
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 28 - 170
Target Start/End: Complemental strand, 18225406 - 18225264
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttg 127  Q
    ||||||| ||||||||||| ||||| || ||||  ||||||||||| || || ||| |||| || || || || ||||| |||||| | |  ||||||||    
T  18225406 ggacattattctcaaaagtcagcttcccttgatcgatgagcttcttcacgatatacttcaaagcataacacccctcgacgtcatgacctaaggcaccttg 18225307  T
Q  128 atggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    ||| || ||||| ||||| ||||| | |||||| |||||||||    
T  18225306 atgaaagtcacatttgagatcagacctgaaccttggaggcaac 18225264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #119
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 170 - 256
Target Start/End: Complemental strand, 35879477 - 35879391
Alignment:
Q  170 cagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccat 256  Q
    |||||| ||||||  |||||| || ||  ||||||||||||| | ||  ||||||||||||||||||||| | ||||||||||||||    
T  35879477 cagagcggtcatgacatcattagctttggccaattcttcccttagagtggctaactcggtacggagctgagcgttctcttcttccat 35879391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #120
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 170
Target Start/End: Complemental strand, 7996775 - 7996635
Alignment:
Q  30 acattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttgat 129  Q
    ||||| ||||||||||| ||||| || ||||  ||||||||||| || || ||  |||| || || || || |||||||||||| | || ||||||||||    
T  7996775 acattattctcaaaagtcagcttcccttgatcgatgagcttcttcacgatatatttcaaagcataacacccctcgacatcatgacctagggcaccttgat 7996676  T
Q  130 ggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    | || || || ||||| ||||| | |||||| |||||||||    
T  7996675 gaaagtcgcatttgagatcagacctgaaccttggaggcaac 7996635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #121
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 170
Target Start/End: Complemental strand, 10643283 - 10643143
Alignment:
Q  30 acattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttgat 129  Q
    ||||| ||||||||||| ||||| || ||||  ||||||||||| || || ||  |||| || || || || |||||||||||| | || ||||||||||    
T  10643283 acattattctcaaaagtcagcttcccttgatcgatgagcttcttcacgatatatttcaaagcataacacccctcgacatcatgacctagggcaccttgat 10643184  T
Q  130 ggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    | || || || ||||| ||||| | |||||| |||||||||    
T  10643183 gaaagtcgcatttgagatcagacctgaaccttggaggcaac 10643143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #122
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 170
Target Start/End: Original strand, 17985001 - 17985141
Alignment:
Q  30 acattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttgat 129  Q
    ||||| ||||||||||| ||||| || ||||  ||||||||||| || || ||| |||| || || ||||| ||||| |||||| | |  ||||||||||    
T  17985001 acattattctcaaaagtcagcttcccttgatcgatgagcttcttcacgatatacttcaaagcataacatccctcgacgtcatgacctaaggcaccttgat 17985100  T
Q  130 ggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    | || ||||| || || ||||| | |||||| |||||||||    
T  17985101 gaaagtcacatttaagatcagacctgaaccttggaggcaac 17985141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #123
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 170
Target Start/End: Complemental strand, 18242952 - 18242812
Alignment:
Q  30 acattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttgat 129  Q
    ||||| ||||||||||| ||||| || |||| |||||| ||||| || || ||| |||| || || || || |||||||||||  | |  ||||||||||    
T  18242952 acattattctcaaaagtcagcttcccttgatcaatgagtttcttcacgatatacttcaaagcataacacccctcgacatcatgtcctaaggcaccttgat 18242853  T
Q  130 ggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    | || ||||| ||||| ||||| | |||||| |||||||||    
T  18242852 gaaagtcacatttgagatcagacctgaaccttggaggcaac 18242812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #124
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 170
Target Start/End: Complemental strand, 24328372 - 24328232
Alignment:
Q  30 acattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttgat 129  Q
    ||||| ||||||||||| ||||| || ||||  ||||||||||| || || ||  |||| || || || || |||||||||||| | || ||||||||||    
T  24328372 acattattctcaaaagtcagcttcccttgatcgatgagcttcttcacgatatatttcaaagcataacacccctcgacatcatgacctagggcaccttgat 24328273  T
Q  130 ggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    | || || || ||||| ||||| | |||||| |||||||||    
T  24328272 gaaagtcgcatttgagatcagacctgaaccttggaggcaac 24328232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #125
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 166
Target Start/End: Complemental strand, 32439367 - 32439231
Alignment:
Q  30 acattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttgat 129  Q
    ||||||||||||||||||| ||| || ||||  || |||||||| || |||||| | |  || ||||| || || ||||||||  | | ||| |||||||    
T  32439367 acattgttctcaaaagttaacttcccttgatctataagcttcttgacgatgtactttagagcatagcacccctcaacatcatgccctaaagcgccttgat 32439268  T
Q  130 ggaaatcacacttgaggtcagaacggaacctgggagg 166  Q
    |||| |||||||| || ||||| |||||||| |||||    
T  32439267 ggaagtcacacttaagatcagagcggaaccttggagg 32439231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #126
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 166
Target Start/End: Complemental strand, 20066254 - 20066120
Alignment:
Q  32 attgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttgatgg 131  Q
    ||||||||||||||||| ||| || ||||  || |||||||| || |||||| | |  || ||||| || || ||||||||  | | ||| |||||||||    
T  20066254 attgttctcaaaagttaacttcccttgatctataagcttcttgacgatgtactttagagcatagcacccctcaacatcatgccctaaagcgccttgatgg 20066155  T
Q  132 aaatcacacttgaggtcagaacggaacctgggagg 166  Q
    || |||||||| || ||||| |||||||| |||||    
T  20066154 aagtcacacttaagatcagagcggaaccttggagg 20066120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0639 (Bit Score: 69; Significance: 5e-31; HSPs: 1)
Name: scaffold0639
Description:

Target: scaffold0639; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 28 - 136
Target Start/End: Original strand, 620 - 728
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttg 127  Q
    ||||||| ||||||||||||| ||||||||||| |||||||||||||||||||||| |||| ||||| |||||||| ||||||||  |||||||| ||||    
T  620 ggacattattctcaaaagttaactttccctgatcaatgagcttctttacaatgtacttcaaagcgtaacatccttcaacatcatggcccagagcatcttg 719  T
Q  128 atggaaatc 136  Q
    |||||||||    
T  720 atggaaatc 728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089 (Bit Score: 62; Significance: 8e-27; HSPs: 6)
Name: scaffold0089
Description:

Target: scaffold0089; HSP #1
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 170 - 259
Target Start/End: Complemental strand, 28513 - 28424
Alignment:
Q  170 cagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagc 259  Q
    ||||| |||||||||||||||||||||| ||||||||||||| | || |||||||||||||||||||||| |||| ||||||||||||||    
T  28513 cagagtagtcatggtatcattggccttagccaattcttcccttagagtagctaactcggtacggagctgagcattttcttcttccatagc 28424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 28 - 170
Target Start/End: Original strand, 46987 - 47129
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttg 127  Q
    ||||||| ||||||||||| |||||||| |||| |||||||||||| || || ||| |||| |||||||| || |||||||||||| |||| || |||||    
T  46987 ggacattattctcaaaagtcagctttccttgatcaatgagcttcttcacgatatacttcaaagcgtagcacccctcgacatcatgacccagggcgccttg 47086  T
Q  128 atggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    ||| |||||||| ||||| || || | |||||| |||||||||    
T  47087 atgaaaatcacatttgagatcggacctgaaccttggaggcaac 47129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 28 - 170
Target Start/End: Original strand, 40071 - 40213
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttg 127  Q
    ||||||| ||||||||||| |||||||| |||| |||||||| ||| || || ||| |||| || ||||| || |||||||||||| |||| || |||||    
T  40071 ggacattattctcaaaagtcagctttccttgatcaatgagctccttcacgatatacttcaaagcatagcacccctcgacatcatgacccagggcgccttg 40170  T
Q  128 atggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    |||||||||||| ||||| || || | ||||||||| ||||||    
T  40171 atggaaatcacatttgagatcggacctgaacctggggggcaac 40213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 28 - 170
Target Start/End: Complemental strand, 30017 - 29875
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttg 127  Q
    ||||||| ||||||||||| |||||||| |||| |||||||||||| || || ||| |||| || ||||| || |||||||| ||| |||| || |||||    
T  30017 ggacattattctcaaaagtcagctttccttgatcaatgagcttcttcacgatatacttcaaagcatagcacccctcgacatcgtgacccagggcgccttg 29918  T
Q  128 atggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
     ||||||||||| ||||| || || | |||||| |||||||||    
T  29917 gtggaaatcacatttgagatcggacctgaaccttggaggcaac 29875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089; HSP #5
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 170 - 256
Target Start/End: Original strand, 41575 - 41661
Alignment:
Q  170 cagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccat 256  Q
    |||||||||||||  |||||| |||||| ||||||||||||| | ||  ||||||||||||||||||||| |||| |||||||||||    
T  41575 cagagcagtcatgacatcattagccttagccaattcttcccttagagtggctaactcggtacggagctgagcattttcttcttccat 41661  T

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Target: scaffold0089; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 170 - 256
Target Start/End: Original strand, 48491 - 48577
Alignment:
Q  170 cagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccat 256  Q
    |||||| ||||||  |||||| || ||| ||||||||||||| | ||  ||||||||||||||||||||| ||||||||||||||||    
T  48491 cagagcggtcatgacatcattagctttagccaattcttcccttagagtggctaactcggtacggagctgagcattctcttcttccat 48577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 55; Significance: 1e-22; HSPs: 2)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 28 - 170
Target Start/End: Original strand, 131 - 273
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttg 127  Q
    ||||||| ||||||||||| |||||||| |||| |||||||||||| || || ||| |||| |||||||| || |||||||||||| |||  || |||||    
T  131 ggacattattctcaaaagtcagctttccttgatcaatgagcttcttcacgatatacttcaaagcgtagcacccctcgacatcatgacccaacgcgccttg 230  T
Q  128 atggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    ||| |||||||| ||||| || || | |||| |||||||||||    
T  231 atgaaaatcacatttgagatcggacctgaacttgggaggcaac 273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 170 - 256
Target Start/End: Original strand, 1636 - 1722
Alignment:
Q  170 cagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccat 256  Q
    |||||||||||||  |||||| || ||  ||||||||||||| | ||  ||||||||||||||||||||| | ||||||||||||||    
T  1636 cagagcagtcatgacatcattagctttggccaattcttcccttagagtggctaactcggtacggagctgagcgttctcttcttccat 1722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0350 (Bit Score: 54; Significance: 5e-22; HSPs: 2)
Name: scaffold0350
Description:

Target: scaffold0350; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 171 - 284
Target Start/End: Original strand, 8746 - 8859
Alignment:
Q  171 agagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttctttc 270  Q
    ||||||||||||   ||||| || ||| ||||||| ||| | | ||| ||||||||||| || |||||| | ||||||||||||||||||||||||||||    
T  8746 agagcagtcatgacgtcattagctttagccaattcctcctttagagaggctaactcggtgcgaagctgagcgttctcttcttccatagcccttttctttc 8845  T
Q  271 ttctgtattctctg 284  Q
    ||||||||||||||    
T  8846 ttctgtattctctg 8859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0350; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 28 - 170
Target Start/End: Original strand, 7241 - 7383
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttg 127  Q
    ||||||| ||||||||||| ||||| || ||||  ||||||||||| || || ||| |||| || || || || |||||||||||| | || ||||||||    
T  7241 ggacattattctcaaaagtcagcttcccttgatcgatgagcttcttcacgatatacttcaaagcataacacccctcgacatcatgacctagggcaccttg 7340  T
Q  128 atggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    ||| || ||||| ||||| ||||| | |||||| |||||||||    
T  7341 atgaaagtcacatttgagatcagacctgaaccttggaggcaac 7383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0237 (Bit Score: 54; Significance: 5e-22; HSPs: 2)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 171 - 284
Target Start/End: Original strand, 16437 - 16550
Alignment:
Q  171 agagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttctttc 270  Q
    ||||||||||||   ||||| || ||| ||||||| ||| | | ||| ||||||||||| || |||||| | ||||||||||||||||||||||||||||    
T  16437 agagcagtcatgacgtcattagctttagccaattcctcctttagagaggctaactcggtgcgaagctgagcgttctcttcttccatagcccttttctttc 16536  T
Q  271 ttctgtattctctg 284  Q
    ||||||||||||||    
T  16537 ttctgtattctctg 16550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0237; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 28 - 170
Target Start/End: Original strand, 14932 - 15074
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttg 127  Q
    ||||||| ||||||||||| ||||| || ||||  ||||||||||| || || ||| |||| || || || || ||||| |||||| | |  ||||||||    
T  14932 ggacattattctcaaaagtcagcttcccttgatcgatgagcttcttcacgatatacttcaaagcataacacccctcgacgtcatgacctaaggcaccttg 15031  T
Q  128 atggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    ||| || ||||| ||||| ||||| | |||||| |||||||||    
T  15032 atgaaagtcacatttgagatcagacctgaaccttggaggcaac 15074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0336 (Bit Score: 51; Significance: 3e-20; HSPs: 2)
Name: scaffold0336
Description:

Target: scaffold0336; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 28 - 170
Target Start/End: Complemental strand, 9820 - 9678
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttg 127  Q
    ||||||| ||||||||||| ||||| || |||| |||||||||||| ||||| ||| |||| || || || || |||||||||||| | |  ||||||||    
T  9820 ggacattattctcaaaagtcagcttcccttgatcaatgagcttcttcacaatatacttcaaagcataacacccctcgacatcatgacctaaggcaccttg 9721  T
Q  128 atggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    ||| |||||||| ||||| ||||| | |||||| |||||||||    
T  9720 atgaaaatcacatttgagatcagatctgaaccttggaggcaac 9678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0336; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 167 - 284
Target Start/End: Complemental strand, 7003 - 6886
Alignment:
Q  167 caacagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttc 266  Q
    ||||||||||||||| | |||||  || ||  ||||||| ||||| ||||| || || ||||||||||||||    |||||||||||||||||| |||||    
T  7003 caacagagcagtcatagcatcatgagctttggccaattcctcccttaaagatgccaattcggtacggagctgcgtgttctcttcttccatagcctttttc 6904  T
Q  267 tttcttctgtattctctg 284  Q
    ||||||||||||||||||    
T  6903 tttcttctgtattctctg 6886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0143 (Bit Score: 51; Significance: 3e-20; HSPs: 3)
Name: scaffold0143
Description:

Target: scaffold0143; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 28 - 170
Target Start/End: Complemental strand, 27546 - 27404
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttg 127  Q
    ||||||| ||||||||||| |||||||| |||| ||| |||||||| || || ||| |||| || ||||| || |||||||||||| |||| || |||||    
T  27546 ggacattattctcaaaagtcagctttccttgatcaataagcttcttcacgatatacttcaaagcatagcacccctcgacatcatgacccagggcgccttg 27447  T
Q  128 atggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    ||| |||||||| ||||| || || | |||||| |||||||||    
T  27446 atgaaaatcacatttgagatcggacctgaaccttggaggcaac 27404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0143; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 225 - 284
Target Start/End: Complemental strand, 17717 - 17658
Alignment:
Q  225 tcggtacggagctgaacattctcttcttccatagcccttttctttcttctgtattctctg 284  Q
    ||||||||||||||    ||||||||||||||||||||||||||||||||||||||||||    
T  17717 tcggtacggagctgtgtgttctcttcttccatagcccttttctttcttctgtattctctg 17658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0143; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 170 - 256
Target Start/End: Complemental strand, 26042 - 25956
Alignment:
Q  170 cagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccat 256  Q
    |||||| ||||||  |||||| || ||  ||||||||||||| | ||  ||||||||||||||||||||| | ||||||||||||||    
T  26042 cagagcggtcatgacatcattagctttggccaattcttcccttagagtggctaactcggtacggagctgagcgttctcttcttccat 25956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 46; Significance: 3e-17; HSPs: 2)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 167 - 284
Target Start/End: Complemental strand, 6708 - 6591
Alignment:
Q  167 caacagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagcccttttc 266  Q
    ||||||||||||||| | |||||  || ||  ||||||| ||||| | ||| || || |||||||| |||||    ||||||||||||||||||||||||    
T  6708 caacagagcagtcatagcatcatgagctttggccaattcctcccttagagatgccaattcggtacgaagctgtgtgttctcttcttccatagcccttttc 6609  T
Q  267 tttcttctgtattctctg 284  Q
    ||||||||||||||||||    
T  6608 tttcttctgtattctctg 6591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 30 - 170
Target Start/End: Complemental strand, 8201 - 8061
Alignment:
Q  30 acattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttgat 129  Q
    ||||| ||||||||||| ||||| || |||| |||||| ||||| ||||| ||| |||| || || || || |||||||||||  | |  ||||||||||    
T  8201 acattattctcaaaagtcagcttcccttgatcaatgagtttcttcacaatatacttcaaagcataacacccctcgacatcatgtcctaaggcaccttgat 8102  T
Q  130 ggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    | || ||||| ||||| ||||| | |||||| |||||||||    
T  8101 gaaagtcacatttgagatcagacctgaaccttggaggcaac 8061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 168 - 259
Target Start/End: Complemental strand, 40413 - 40322
Alignment:
Q  168 aacagagcagtcatggtatcattggccttacccaattcttccctcaaagaagctaactcggtacggagctgaacattctcttcttccatagc 259  Q
    |||| ||||||||||||||||| ||||||| |||| ||||||||||||| ||| |||||||| || ||||||   |||||||| ||||||||    
T  40413 aacaaagcagtcatggtatcatgggccttagccaactcttccctcaaagtagccaactcggtgcgaagctgagtgttctcttcctccatagc 40322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0159 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 2)
Name: scaffold0159
Description:

Target: scaffold0159; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 28 - 170
Target Start/End: Original strand, 9068 - 9210
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttg 127  Q
    ||||||| ||||||||||| ||||| || ||||  ||||||||||| || || ||| |||| || || || || |||||||||||| | || ||||||||    
T  9068 ggacattattctcaaaagtcagcttcccttgatcgatgagcttcttcacgatatacttcaaagcataacacccctcgacatcatgacctagggcaccttg 9167  T
Q  128 atggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    ||| || || || ||||| ||||| | |||||| |||||||||    
T  9168 atgaaagtcgcatttgagatcagacctgaaccttggaggcaac 9210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0159; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 28 - 170
Target Start/End: Complemental strand, 20269 - 20127
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttg 127  Q
    ||||||| ||||||||||| ||||| || ||||  ||||||||||| || || ||| |||| || || || || |||||||||||| | || ||||||||    
T  20269 ggacattattctcaaaagtcagcttcccttgatcgatgagcttcttcacgatatacttcaaagcataacacccctcgacatcatgacctagggcaccttg 20170  T
Q  128 atggaaatcacacttgaggtcagaacggaacctgggaggcaac 170  Q
    ||| || || || ||||| ||||| | |||||| |||||||||    
T  20169 atgaaagtcgcatttgagatcagacctgaaccttggaggcaac 20127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0099 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0099
Description:

Target: scaffold0099; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 170 - 259
Target Start/End: Original strand, 49706 - 49798
Alignment:
Q  170 cagagcagtcatggtatcattggccttacccaattcttccc-tcaaag--aagctaactcggtacggagctgaacattctcttcttccatagc 259  Q
    |||||| ||||||||||||||||||||| |||||||||||| | | ||  |  |||||||||||||||||||| | || ||||||||||||||    
T  49706 cagagctgtcatggtatcattggccttagccaattcttccctttagagttagtctaactcggtacggagctgagcgttttcttcttccatagc 49798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0144 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0144
Description:

Target: scaffold0144; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 28 - 160
Target Start/End: Original strand, 26203 - 26335
Alignment:
Q  28 ggacattgttctcaaaagttagctttccctgatgaatgagcttctttacaatgtacctcaacgcgtagcatccttcgacatcatgatccagagcaccttg 127  Q
    ||||||| ||||||||||| ||||| || ||||  ||||||||||| || || ||| |||| || || || || |||||||||||| | || ||||||||    
T  26203 ggacattattctcaaaagtcagcttcccttgatcgatgagcttcttcacgatatacttcaaagcataacacccctcgacatcatgacctagggcaccttg 26302  T
Q  128 atggaaatcacacttgaggtcagaacggaacct 160  Q
    ||| || ||||| ||||| ||||| | ||||||    
T  26303 atgaaagtcacatttgagatcagacctgaacct 26335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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