View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12651_low_14 (Length: 279)

Name: NF12651_low_14
Description: NF12651
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12651_low_14
NF12651_low_14
[»] chr6 (13 HSPs)
chr6 (1-257)||(24631850-24632106)
chr6 (124-248)||(33385528-33385652)
chr6 (137-243)||(31564645-31564751)
chr6 (124-251)||(33259817-33259944)
chr6 (8-140)||(33259645-33259777)
chr6 (1-140)||(33416207-33416346)
chr6 (3-57)||(33385371-33385425)
chr6 (153-241)||(2455840-2455926)
chr6 (181-248)||(2732194-2732261)
chr6 (1-41)||(9165238-9165278)
chr6 (193-245)||(10616492-10616543)
chr6 (62-121)||(14340931-14340991)
chr6 (153-248)||(32171497-32171590)
[»] scaffold0428 (1 HSPs)
scaffold0428 (124-251)||(3905-4032)
[»] chr2 (12 HSPs)
chr2 (194-251)||(17443552-17443609)
chr2 (62-121)||(33197367-33197427)
chr2 (137-222)||(32821823-32821906)
chr2 (150-241)||(1160626-1160714)
chr2 (153-241)||(24098132-24098216)
chr2 (153-241)||(7283026-7283112)
chr2 (153-241)||(41809199-41809285)
chr2 (157-241)||(43456661-43456743)
chr2 (151-222)||(11063516-11063585)
chr2 (201-241)||(40943989-40944029)
chr2 (62-133)||(42974234-42974306)
chr2 (153-181)||(43259864-43259892)
[»] chr8 (8 HSPs)
chr8 (153-241)||(13000378-13000464)
chr8 (153-244)||(39551160-39551249)
chr8 (153-247)||(26410309-26410402)
chr8 (62-140)||(7026613-7026692)
chr8 (153-234)||(4055577-4055656)
chr8 (62-122)||(5383041-5383102)
chr8 (62-122)||(27754560-27754621)
chr8 (96-140)||(14247341-14247385)
[»] chr5 (8 HSPs)
chr5 (137-186)||(30653383-30653432)
chr5 (155-241)||(16380525-16380610)
chr5 (156-241)||(11700332-11700415)
chr5 (62-127)||(3951500-3951565)
chr5 (103-140)||(6734001-6734038)
chr5 (207-247)||(14714791-14714831)
chr5 (193-241)||(25079522-25079569)
chr5 (193-241)||(25137491-25137538)
[»] chr3 (5 HSPs)
chr3 (153-241)||(43115086-43115172)
chr3 (182-225)||(32703182-32703225)
chr3 (155-241)||(37273166-37273250)
chr3 (160-241)||(27294383-27294462)
chr3 (153-241)||(42745068-42745154)
[»] chr7 (6 HSPs)
chr7 (155-248)||(48157067-48157158)
chr7 (160-216)||(5939122-5939176)
chr7 (95-140)||(45078209-45078254)
chr7 (135-238)||(12234846-12234947)
chr7 (153-181)||(15075097-15075125)
chr7 (145-181)||(26935569-26935605)
[»] chr4 (3 HSPs)
chr4 (153-253)||(21157798-21157896)
chr4 (193-241)||(25717661-25717709)
chr4 (153-181)||(51197494-51197522)
[»] chr1 (7 HSPs)
chr1 (150-245)||(3597231-3597324)
chr1 (153-216)||(19412576-19412637)
chr1 (154-248)||(15581285-15581377)
chr1 (153-241)||(11639370-11639456)
chr1 (153-233)||(16322879-16322957)
chr1 (153-241)||(31517694-31517780)
chr1 (100-140)||(870966-871006)
[»] scaffold0590 (1 HSPs)
scaffold0590 (65-133)||(1190-1259)
[»] scaffold0275 (1 HSPs)
scaffold0275 (65-133)||(2716-2785)


Alignment Details
Target: chr6 (Bit Score: 241; Significance: 1e-133; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 1 - 257
Target Start/End: Complemental strand, 24632106 - 24631850
Alignment:
Q  1 caattagaaatcttatgtaggaattcaaagattggtgaacaagttggaaaactaagacctcgtttggataagcaacttaattaaatattataagataaac 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24632106 caattagaaatcttatgtaggaattcaaagattggtgaacaagttggaaaactaagacctcgtttggataagcaacttaattaaatattataagataaac 24632007  T
Q  101 gcttatcatataagtgcttatgcataatctattgttataagcttttctaaacagcttatggaaataagctaaaaacagcttttatgggcatatcatgagt 200  Q
    ||||||||||||||||||||||||||| |||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||    
T  24632006 gcttatcatataagtgcttatgcataagctatggttataagcttttctaaacagcttttggaaataagctaaaaacagcttttatggacatatcatgagt 24631907  T
Q  201 tgtttccataaactcttccaaatagtttcacaagtgcttatatcagtatatgaaaat 257  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24631906 tgtttccataaactcttccaaatagtttcacaagtgcttatatcagtatatgaaaat 24631850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 124 - 248
Target Start/End: Original strand, 33385528 - 33385652
Alignment:
Q  124 ataatctattgttataagcttttctaaacagcttatggaaataagctaaaaacagcttttatgggcatatcatgagttgtttccataaactcttccaaat 223  Q
    |||| ||||| | ||||||||||||| |||| ||||||||| ||||| |||||| ||||||||| ||| ||||||| ||||||||||||||||||||||     
T  33385528 ataagctattttcataagcttttctagacagtttatggaaaaaagctgaaaacaacttttatggacatgtcatgagctgtttccataaactcttccaaac 33385627  T
Q  224 agtttcacaagtgcttatatcagta 248  Q
    |||||||||||||||||||||||||    
T  33385628 agtttcacaagtgcttatatcagta 33385652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 137 - 243
Target Start/End: Complemental strand, 31564751 - 31564645
Alignment:
Q  137 ataagcttttctaaacagcttatggaaataagctaaaaacagcttttatgggcatatcatgagttgtttccataaactcttccaaatagtttcacaagtg 236  Q
    ||||||||||||| ||| | |||||||||||||| |||||| ||||| ||| ||| |||| |||||||||||| |||||||| ||| ||| |||||||||    
T  31564751 ataagcttttctagacaacatatggaaataagctgaaaacaacttttgtggacatgtcattagttgtttccattaactcttcgaaacagtctcacaagtg 31564652  T
Q  237 cttatat 243  Q
    || ||||    
T  31564651 ctaatat 31564645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 124 - 251
Target Start/End: Original strand, 33259817 - 33259944
Alignment:
Q  124 ataatctattgttataagcttttctaaacagcttatggaaataagctaaaaacagcttttatgggcatatcatgagttgtttccataaactcttccaaat 223  Q
    |||| ||||| | ||||||||||||| ||||  |||| |||   ||| |||||||||||||||| ||| |||| ||  |||||||||||||||||||||     
T  33259817 ataagctattttcataagcttttctatacagtatatgtaaaatggctgaaaacagcttttatggacatgtcattagccgtttccataaactcttccaaac 33259916  T
Q  224 agtttcacaagtgcttatatcagtatat 251  Q
    |||||  ||||||||||||||| |||||    
T  33259917 agtttggcaagtgcttatatcaatatat 33259944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 8 - 140
Target Start/End: Original strand, 33259645 - 33259777
Alignment:
Q  8 aaatcttatgtaggaattcaaagattggtgaacaagttggaaaactaagacctcgtttggataagcaacttaattaaatattataagataaacgcttatc 107  Q
    |||||||||||| ||||||||||||  || |  | | |||||| ||||||||| |||||||||| || | ||||| ||  |||||||||||  ||||  |    
T  33259645 aaatcttatgtaagaattcaaagatatgtaagaaggctggaaacctaagaccttgtttggataaacagcctaattcaagcttataagataagagctttac 33259744  T
Q  108 atataagtgcttatgcataatctattgttataa 140  Q
    ||||||||||||||| |||| ||||| ||||||    
T  33259745 atataagtgcttatgtataagctatttttataa 33259777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 33416207 - 33416346
Alignment:
Q  1 caattagaaatcttatgtaggaattcaaagattggtgaacaagttggaaaactaagacctcgtttggataagcaacttaattaaatattataagataaac 100  Q
    ||||||||| |||||  ||  ||||||||||| ||||||||   | |||||| | ||||| |||||||||| |||| ||||||||  ||||||||||| |    
T  33416207 caattagaagtcttaactaaaaattcaaagataggtgaacagactagaaaaccatgaccttgtttggataaacaacctaattaaagcttataagataagc 33416306  T
Q  101 gcttatcatataagtgcttatgcataatctattgttataa 140  Q
    ||| || ||  ||||||||||| |||| ||||| ||||||    
T  33416307 gctcattatcaaagtgcttatgtataagctatttttataa 33416346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 57
Target Start/End: Original strand, 33385371 - 33385425
Alignment:
Q  3 attagaaatcttatgtaggaattcaaagattggtgaacaagttggaaaactaaga 57  Q
    ||||||||||||||||| |||||||||||| |||||||| | |||||| ||||||    
T  33385371 attagaaatcttatgtaagaattcaaagataggtgaacaggctggaaacctaaga 33385425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 153 - 241
Target Start/End: Original strand, 2455840 - 2455926
Alignment:
Q  153 agcttatggaaataagctaaaaacagcttttatgggcatatcatgagttgtttccataaactcttccaaatagtttcacaagtgcttat 241  Q
    |||||||||||||||| | |||| ||  ||||||||||| |||| |||||||||||||| |||||| ||| | | || |||||||||||    
T  2455840 agcttatggaaataagttgaaaatag--tttatgggcatgtcataagttgtttccataagctcttctaaacaatctcgcaagtgcttat 2455926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 181 - 248
Target Start/End: Complemental strand, 2732261 - 2732194
Alignment:
Q  181 tttatgggcatatcatgagttgtttccataaactcttccaaatagtttcacaagtgcttatatcagta 248  Q
    ||||||| || ||||| || ||||||||||| || ||||||| ||| |||||||||||||| ||||||    
T  2732261 tttatggacagatcattagctgtttccataagcttttccaaacagtctcacaagtgcttatgtcagta 2732194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 9165238 - 9165278
Alignment:
Q  1 caattagaaatcttatgtaggaattcaaagattggtgaaca 41  Q
    |||||||||||||||||||  ||||||||||| ||||||||    
T  9165238 caattagaaatcttatgtaaaaattcaaagataggtgaaca 9165278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 193 - 245
Target Start/End: Complemental strand, 10616543 - 10616492
Alignment:
Q  193 tcatgagttgtttccataaactcttccaaatagtttcacaagtgcttatatca 245  Q
    |||| |||||||||||||| |||| |||||||| ||||||| |||||||||||    
T  10616543 tcataagttgtttccataagctctcccaaatag-ttcacaaatgcttatatca 10616492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 62 - 121
Target Start/End: Complemental strand, 14340991 - 14340931
Alignment:
Q  62 gtttggataagcaacttaattaaata-ttataagataaacgcttatcatataagtgcttat 121  Q
    |||||||||| |||||||||||| |  |||||| |||||| ||||||||||||||| ||||    
T  14340991 gtttggataaacaacttaattaagtgcttataacataaacacttatcatataagtgtttat 14340931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 153 - 248
Target Start/End: Original strand, 32171497 - 32171590
Alignment:
Q  153 agcttatggaaataagctaaaaacagcttttatgggcatatcatgagttgtttccataaactcttccaaatagtttcacaagtgcttatatcagta 248  Q
    |||||||||||||||||| |||||||  || ||||   |||||| |||||||||| ||| |||| ||||  ||| |||||| ||||||| ||||||    
T  32171497 agcttatggaaataagctgaaaacag--ttcatggaggtatcataagttgtttccttaagctctcccaaccagtctcacaaatgcttatgtcagta 32171590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0428 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0428
Description:

Target: scaffold0428; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 124 - 251
Target Start/End: Original strand, 3905 - 4032
Alignment:
Q  124 ataatctattgttataagcttttctaaacagcttatggaaataagctaaaaacagcttttatgggcatatcatgagttgtttccataaactcttccaaat 223  Q
    |||| ||||| | ||||||||||||| ||||  |||| |||   ||| |||||||||||||||| ||| |||||||  |||||||||||||||||||||     
T  3905 ataagctattttcataagcttttctagacagtatatgtaaaatggctgaaaacagcttttatggacatgtcatgagccgtttccataaactcttccaaac 4004  T
Q  224 agtttcacaagtgcttatatcagtatat 251  Q
    ||| |||||||||||||||||| |||||    
T  4005 agtctcacaagtgcttatatcaatatat 4032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 46; Significance: 3e-17; HSPs: 12)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 194 - 251
Target Start/End: Complemental strand, 17443609 - 17443552
Alignment:
Q  194 catgagttgtttccataaactcttccaaatagtttcacaagtgcttatatcagtatat 251  Q
    |||||| |||||||||||||||||||||| ||| ||||||||||||||||||||||||    
T  17443609 catgagctgtttccataaactcttccaaacagtctcacaagtgcttatatcagtatat 17443552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 62 - 121
Target Start/End: Complemental strand, 33197427 - 33197367
Alignment:
Q  62 gtttggataagcaacttaattaaata-ttataagataaacgcttatcatataagtgcttat 121  Q
    |||||||||| ||||| ||||||| | |||||| |||||||||||||||||||||||||||    
T  33197427 gtttggataaacaactaaattaaacacttataacataaacgcttatcatataagtgcttat 33197367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 137 - 222
Target Start/End: Original strand, 32821823 - 32821906
Alignment:
Q  137 ataagcttttctaaacagcttatggaaataagctaaaaacagcttttatgggcatatcatgagttgtttccataaactcttccaaa 222  Q
    ||||||| | ||||| ||||||| ||||||| || ||||||||||  |||| ||| |||| ||||||||| |||||||||||||||    
T  32821823 ataagctatcctaaagagcttatagaaataaactgaaaacagctt--atggacatgtcataagttgtttctataaactcttccaaa 32821906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 150 - 241
Target Start/End: Complemental strand, 1160714 - 1160626
Alignment:
Q  150 aacagcttatggaaataagctaaaaacagcttttatgggcatatcatgagttgtttccataaactcttccaaatagtttcacaagtgcttat 241  Q
    |||||||||||||||||| ||||||||| |  |||||| ||| ||||  |||||||||||||| ||| |||||||||  |||||| ||||||    
T  1160714 aacagcttatggaaataaactaaaaacaac--ttatggacatgtcataggttgtttccataaa-tctaccaaatagtcacacaagagcttat 1160626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 241
Target Start/End: Original strand, 24098132 - 24098216
Alignment:
Q  153 agcttatggaaataagctaaaaacagcttttatgggcatatcatgagttgtttccataaactcttccaaatagtttcacaagtgcttat 241  Q
    |||||||||||||||||| |||||||  ||||||||||| | || | |||||||  ||| ||||  |||||||||| ||||||||||||    
T  24098132 agcttatggaaataagctgaaaacag--tttatgggcatgttattaattgtttctgtaagctct--caaatagttttacaagtgcttat 24098216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 153 - 241
Target Start/End: Original strand, 7283026 - 7283112
Alignment:
Q  153 agcttatggaaataagctaaaaacagcttttatgggcatatcatgagttgtttccataaactcttccaaatagtttcacaagtgcttat 241  Q
    |||||||||| ||||| | |||||| |||  |||| |||||||| ||||||||||| || ||  |||||||||| ||||||||| ||||    
T  7283026 agcttatggatataagatgaaaacaactt--atggacatatcataagttgtttccaaaagctaatccaaatagtctcacaagtgtttat 7283112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 153 - 241
Target Start/End: Complemental strand, 41809285 - 41809199
Alignment:
Q  153 agcttatggaaataagctaaaaacagcttttatgggcatatcatgagttgtttccataaactcttccaaatagtttcacaagtgcttat 241  Q
    ||||||||||||||||||||||||| |  |||||  ||| |||| ||||||||||| || ||||| |||  ||| ||||||||| ||||    
T  41809285 agcttatggaaataagctaaaaacaac--ttatgaacatgtcataagttgtttccacaagctcttacaatcagtctcacaagtgtttat 41809199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 157 - 241
Target Start/End: Complemental strand, 43456743 - 43456661
Alignment:
Q  157 tatggaaataagctaaaaacagcttttatgggcatatcatgagttgtttccataaactcttccaaatagtttcacaagtgcttat 241  Q
    |||||||||||||| |||||||  ||||||| ||| ||||||||||||| || || ||||| |||| ||| | ||||||| ||||    
T  43456743 tatggaaataagctgaaaacag--tttatggacatgtcatgagttgttttcacaagctctttcaaacagtcttacaagtgtttat 43456661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 222
Target Start/End: Original strand, 11063516 - 11063585
Alignment:
Q  151 acagcttatggaaataagctaaaaacagcttttatgggcatatcatgagttgtttccataaactcttccaaa 222  Q
    |||||||||| |||||||||||||||| |  |||||| ||| |||| |  ||||||||||| ||||||||||    
T  11063516 acagcttatgaaaataagctaaaaacaac--ttatggacatgtcataatatgtttccataagctcttccaaa 11063585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 241
Target Start/End: Original strand, 40943989 - 40944029
Alignment:
Q  201 tgtttccataaactcttccaaatagtttcacaagtgcttat 241  Q
    ||||| |||||||| ||||||| ||||||||||||||||||    
T  40943989 tgttttcataaacttttccaaacagtttcacaagtgcttat 40944029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 62 - 133
Target Start/End: Original strand, 42974234 - 42974306
Alignment:
Q  62 gtttggataagcaacttaattaa-atattataagataaacgcttatcatataagtgcttatgcataatctatt 133  Q
    ||||||||||||||||||||||| |  |||||  |||||| |||||||||| ||||||| || |||| |||||    
T  42974234 gtttggataagcaacttaattaagagcttatagcataaacacttatcatattagtgcttgtgtataaactatt 42974306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 153 - 181
Target Start/End: Original strand, 43259864 - 43259892
Alignment:
Q  153 agcttatggaaataagctaaaaacagctt 181  Q
    |||||||||||||||||||||||||||||    
T  43259864 agcttatggaaataagctaaaaacagctt 43259892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 8)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 153 - 241
Target Start/End: Complemental strand, 13000464 - 13000378
Alignment:
Q  153 agcttatggaaataagctaaaaacagcttttatgggcatatcatgagttgtttccataaactcttccaaatagtttcacaagtgcttat 241  Q
    |||||||||||||||||| |||||| ||| |  || ||| |||| ||||||| |||||||||||| |||||||| ||||||||||||||    
T  13000464 agcttatggaaataagctgaaaacaacttgt--ggacatgtcataagttgttaccataaactcttgcaaatagtctcacaagtgcttat 13000378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 153 - 244
Target Start/End: Complemental strand, 39551249 - 39551160
Alignment:
Q  153 agcttatggaaataagctaaaaacagcttttatgggcatatcatgagttgtttccataaactcttccaaatagtttcacaagtgcttatatc 244  Q
    |||||||  ||||||| ||||||||||||||  || ||| |||| ||||||||||||||| ||| ||||| |||||||||| ||||||||||    
T  39551249 agcttataaaaataagttaaaaacagctttt--ggacatgtcataagttgtttccataaattctcccaaacagtttcacaaatgcttatatc 39551160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 153 - 247
Target Start/End: Original strand, 26410309 - 26410402
Alignment:
Q  153 agcttatggaaataa-gctaaaaacagcttttatgggcatatcatgagttgtttccataaactcttccaaatagtttcacaagtgcttatatcagt 247  Q
    ||||||||||||||| |||||||||||||| |  || ||| ||||||| ||||||||||| |||| ||||  ||| ||| |||||||||| |||||    
T  26410309 agcttatggaaataaagctaaaaacagcttct--ggacatgtcatgagctgtttccataagctctcccaagcagtctcagaagtgcttatgtcagt 26410402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 62 - 140
Target Start/End: Original strand, 7026613 - 7026692
Alignment:
Q  62 gtttggataagcaacttaattaaatattataag-ataaacgcttatcatataagtgcttatgcataatctattgttataa 140  Q
    |||||||||| ||||||||||||  |||   || ||||||  ||||||||||||||||||||||||| ||| ||||||||    
T  7026613 gtttggataaacaacttaattaagcatttacagcataaacatttatcatataagtgcttatgcataagctactgttataa 7026692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 234
Target Start/End: Complemental strand, 4055656 - 4055577
Alignment:
Q  153 agcttatggaaataagctaaaaacagcttttatgggcatatcatgagttgtttccataaactcttccaaatagtttcacaag 234  Q
    |||||| ||||||||||| |||||||  ||||||| ||| |||| |||| |||| ||||||||| ||||| ||||| |||||    
T  4055656 agcttaaggaaataagctgaaaacag--tttatggacatgtcataagttatttctataaactctcccaaacagttttacaag 4055577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 122
Target Start/End: Original strand, 5383041 - 5383102
Alignment:
Q  62 gtttggataagcaacttaattaaata-ttataagataaacgcttatcatataagtgcttatg 122  Q
    |||||||||| || |||||||||||| |||||| | |||| ||||||||||||||| |||||    
T  5383041 gtttggataaacagcttaattaaatacttataacaaaaacacttatcatataagtgtttatg 5383102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 122
Target Start/End: Complemental strand, 27754621 - 27754560
Alignment:
Q  62 gtttggataagcaacttaattaaatatt-ataagataaacgcttatcatataagtgcttatg 122  Q
    |||||| |||||||||||||||| | || |||  ||||||||||||||| ||||||||||||    
T  27754621 gtttgggtaagcaacttaattaagtgtttatagtataaacgcttatcatttaagtgcttatg 27754560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 96 - 140
Target Start/End: Complemental strand, 14247385 - 14247341
Alignment:
Q  96 taaacgcttatcatataagtgcttatgcataatctattgttataa 140  Q
    ||||||||||||||||||||||||||| |||| || || ||||||    
T  14247385 taaacgcttatcatataagtgcttatgtataaactgtttttataa 14247341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 8)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 137 - 186
Target Start/End: Complemental strand, 30653432 - 30653383
Alignment:
Q  137 ataagcttttctaaacagcttatggaaataagctaaaaacagcttttatg 186  Q
    ||||||||||||| |||||||||||||||||||| |||||||||||||||    
T  30653432 ataagcttttctagacagcttatggaaataagctgaaaacagcttttatg 30653383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 155 - 241
Target Start/End: Complemental strand, 16380610 - 16380525
Alignment:
Q  155 cttatggaaataagcta-aaaacagcttttatgggcatatcatgagttgtttccataaactcttccaaatagtttcacaagtgcttat 241  Q
    ||||||||||||||||  ||||||||||  |||| ||| || | || ||||||||||||||||| ||||||||||||||||| |||||    
T  16380610 cttatggaaataagctgcaaaacagctt--atggacatgtcgtaagctgtttccataaactcttgcaaatagtttcacaagtacttat 16380525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 156 - 241
Target Start/End: Complemental strand, 11700415 - 11700332
Alignment:
Q  156 ttatggaaataagctaaaaacagcttttatgggcatatcatgagttgtttccataaactcttccaaatagtttcacaagtgcttat 241  Q
    ||||| |||||| || ||||||||||  |||| ||| |||| ||||||||||||||||||| |  |||||| ||||||||||||||    
T  11700415 ttatgaaaataatctgaaaacagctt--atggacatgtcataagttgtttccataaactctcctcaatagtctcacaagtgcttat 11700332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 127
Target Start/End: Original strand, 3951500 - 3951565
Alignment:
Q  62 gtttggataagcaacttaattaaatattataagataaacgcttatcatataagtgcttatgcataa 127  Q
    ||||||||||  |||||||||||   |||||  ||||| |||||||||||||||||||||| ||||    
T  3951500 gtttggataaataacttaattaagcgttatagcataaatgcttatcatataagtgcttatgtataa 3951565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 103 - 140
Target Start/End: Complemental strand, 6734038 - 6734001
Alignment:
Q  103 ttatcatataagtgcttatgcataatctattgttataa 140  Q
    |||||||||||||| |||||||||||||||| ||||||    
T  6734038 ttatcatataagtgtttatgcataatctatttttataa 6734001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 207 - 247
Target Start/End: Complemental strand, 14714831 - 14714791
Alignment:
Q  207 cataaactcttccaaatagtttcacaagtgcttatatcagt 247  Q
    ||||| |||| |||||||||||||||||||||||| |||||    
T  14714831 cataatctctcccaaatagtttcacaagtgcttatgtcagt 14714791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 193 - 241
Target Start/End: Complemental strand, 25079569 - 25079522
Alignment:
Q  193 tcatgagttgtttccataaactcttccaaatagtttcacaagtgcttat 241  Q
    |||| ||||||||| ||||||||| ||||||||| ||||||||||||||    
T  25079569 tcataagttgtttcgataaactct-ccaaatagtctcacaagtgcttat 25079522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 193 - 241
Target Start/End: Complemental strand, 25137538 - 25137491
Alignment:
Q  193 tcatgagttgtttccataaactcttccaaatagtttcacaagtgcttat 241  Q
    |||| ||||||||| ||||||||| ||||||||| ||||||||||||||    
T  25137538 tcataagttgtttcgataaactct-ccaaatagtctcacaagtgcttat 25137491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 38; Significance: 0.000000000002; HSPs: 5)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 153 - 241
Target Start/End: Original strand, 43115086 - 43115172
Alignment:
Q  153 agcttatggaaataagctaaaaacagcttttatgggcatatcatgagttgtttccataaactcttccaaatagtttcacaagtgcttat 241  Q
    |||||||||||||||||| ||||||  ||  |||| ||| |||| ||||||||||||||||||||||||| | | ||||||||| ||||    
T  43115086 agcttatggaaataagctgaaaacaagtt--atggacatgtcataagttgtttccataaactcttccaaacaatctcacaagtgattat 43115172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 182 - 225
Target Start/End: Original strand, 32703182 - 32703225
Alignment:
Q  182 ttatgggcatatcatgagttgtttccataaactcttccaaatag 225  Q
    ||||||||||||||| || ||||||||||| |||||||||||||    
T  32703182 ttatgggcatatcataaggtgtttccataagctcttccaaatag 32703225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 155 - 241
Target Start/End: Original strand, 37273166 - 37273250
Alignment:
Q  155 cttatggaaataagctaaaaacagcttttatgggcatatcatgagttgtttccataaactcttccaaatagtttcacaagtgcttat 241  Q
    |||||||||||||| | |||||| |||  |||| ||| |||| |||||||||||||| |||| ||||| ||| |||| |||||||||    
T  37273166 cttatggaaataagttgaaaacaactt--atggacatgtcataagttgtttccataagctctcccaaacagtctcaccagtgcttat 37273250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 241
Target Start/End: Original strand, 27294383 - 27294462
Alignment:
Q  160 ggaaataagctaaaaacagcttttatgggcatatcatgagttgtttccataaactcttccaaatagtttcacaagtgcttat 241  Q
    ||||||||| | ||||||||||  ||| ||||||||||||||||||| || | ||||  |||| ||| ||||||||||||||    
T  27294383 ggaaataagatgaaaacagctt--atgagcatatcatgagttgtttctatgagctctctcaaacagtctcacaagtgcttat 27294462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 153 - 241
Target Start/End: Original strand, 42745068 - 42745154
Alignment:
Q  153 agcttatggaaataagctaaaaacagcttttatgggcatatcatgagttgtttccataaactcttccaaatagtttcacaagtgcttat 241  Q
    |||||||||||||||| | |||||| |||  |||  ||| |||| |||||||| |||||| ||||| ||||| | ||||||||||||||    
T  42745068 agcttatggaaataagatgaaaacaactt--atgaacatgtcataagttgtttacataaattcttctaaataatatcacaagtgcttat 42745154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 35; Significance: 0.0000000001; HSPs: 6)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 155 - 248
Target Start/End: Complemental strand, 48157158 - 48157067
Alignment:
Q  155 cttatggaaataagctaaaaacagcttttatgggcatatcatgagttgtttccataaactcttccaaatagtttcacaagtgcttatatcagta 248  Q
    |||||||||||||||| ||||||||  |||||| |||  ||| ||||||||| |||| |||| ||||| ||| |||||| |||||| |||||||    
T  48157158 cttatggaaataagctgaaaacagc--ttatggacatggcataagttgtttctataagctctcccaaacagtctcacaaatgcttaaatcagta 48157067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 160 - 216
Target Start/End: Original strand, 5939122 - 5939176
Alignment:
Q  160 ggaaataagctaaaaacagcttttatgggcatatcatgagttgtttccataaactct 216  Q
    |||||||||||||||| ||  ||||||| |||||||| |||||||||||||| ||||    
T  5939122 ggaaataagctaaaaaaag--tttatggacatatcatcagttgtttccataagctct 5939176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 95 - 140
Target Start/End: Original strand, 45078209 - 45078254
Alignment:
Q  95 ataaacgcttatcatataagtgcttatgcataatctattgttataa 140  Q
    ||||||| |||||||||||||||||||| |||| ||||| ||||||    
T  45078209 ataaacgtttatcatataagtgcttatgtataagctatttttataa 45078254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 135 - 238
Target Start/End: Complemental strand, 12234947 - 12234846
Alignment:
Q  135 ttataagcttttctaaacagcttatggaaataagctaaaaacagcttttatgggcatatcatgagttgtttccataaactcttccaaatagtttcacaag 234  Q
    |||| |||||| ||| | |||||||||||||||||| ||||||||  |||| | ||| |||| ||||||||| |||| || ||||||  ||| ||||| |    
T  12234947 ttatgagctttcctagagagcttatggaaataagctgaaaacagc--ttatagacatgtcataagttgtttctataagctattccaagcagtctcacacg 12234850  T
Q  235 tgct 238  Q
    ||||    
T  12234849 tgct 12234846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 153 - 181
Target Start/End: Complemental strand, 15075125 - 15075097
Alignment:
Q  153 agcttatggaaataagctaaaaacagctt 181  Q
    |||||||||||||||||||||||||||||    
T  15075125 agcttatggaaataagctaaaaacagctt 15075097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 145 - 181
Target Start/End: Complemental strand, 26935605 - 26935569
Alignment:
Q  145 ttctaaacagcttatggaaataagctaaaaacagctt 181  Q
    ||||||| |||||||||||||||||| ||||||||||    
T  26935605 ttctaaagagcttatggaaataagctgaaaacagctt 26935569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 34; Significance: 0.0000000004; HSPs: 3)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 153 - 253
Target Start/End: Original strand, 21157798 - 21157896
Alignment:
Q  153 agcttatggaaataagctaaaaacagcttttatgggcatatcatgagttgtttccataaactcttccaaatagtttcacaagtgcttatatcagtatatg 252  Q
    ||||||||||||||||||||||||||||||  ||   || |||| || ||||||  ||| |||||||||| ||| | |||||||||||| |||||| |||    
T  21157798 agcttatggaaataagctaaaaacagcttt--tgtaaatgtcataagctgtttctgtaagctcttccaaacagtcttacaagtgcttatgtcagtagatg 21157895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 193 - 241
Target Start/End: Original strand, 25717661 - 25717709
Alignment:
Q  193 tcatgagttgtttccataaactcttccaaatagtttcacaagtgcttat 241  Q
    |||| |||||||||||||| |||||||||| | ||||||||||||||||    
T  25717661 tcataagttgtttccataagctcttccaaacaatttcacaagtgcttat 25717709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 153 - 181
Target Start/End: Complemental strand, 51197522 - 51197494
Alignment:
Q  153 agcttatggaaataagctaaaaacagctt 181  Q
    |||||||||||||||||||||||||||||    
T  51197522 agcttatggaaataagctaaaaacagctt 51197494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 33; Significance: 0.000000002; HSPs: 7)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 150 - 245
Target Start/End: Complemental strand, 3597324 - 3597231
Alignment:
Q  150 aacagcttatggaaataagctaaaaacagcttttatgggcatatcatgagttgtttccataaactcttccaaatagtttcacaagtgcttatatca 245  Q
    ||||| ||||||||||||||| |||| |||||  |||| ||| |||| |||| |||  || |||||||||||| ||| ||||||||| ||||||||    
T  3597324 aacagtttatggaaataagctgaaaatagctt--atggccatgtcataagttatttttatcaactcttccaaacagtctcacaagtggttatatca 3597231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 153 - 216
Target Start/End: Complemental strand, 19412637 - 19412576
Alignment:
Q  153 agcttatggaaataagctaaaaacagcttttatgggcatatcatgagttgtttccataaactct 216  Q
    ||||||||||||||||| |||| ||||||  |||| ||| |||| |||||||||||||||||||    
T  19412637 agcttatggaaataagccaaaatcagctt--atggacatgtcataagttgtttccataaactct 19412576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 154 - 248
Target Start/End: Original strand, 15581285 - 15581377
Alignment:
Q  154 gcttatggaaataagctaaaaacagcttttatgggcatatcatgagttgtttccataaactcttccaaatagtttcacaagtgcttatatcagta 248  Q
    |||||| |||||| ||| |||||||||| ||  | ||| |||| |||||||||||| | |||||||||| | | |||||||||||||| ||||||    
T  15581285 gcttatagaaataggctgaaaacagcttata--gacatgtcataagttgtttccattagctcttccaaacaatctcacaagtgcttatgtcagta 15581377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 153 - 241
Target Start/End: Complemental strand, 11639456 - 11639370
Alignment:
Q  153 agcttatggaaataagctaaaaacagcttttatgggcatatcatgagttgtttccataaactcttccaaatagtttcacaagtgcttat 241  Q
    |||||||| ||||||||||||||||||  |||||| ||| |||| || ||||| ||||| |||||| |||| || ||| |||| |||||    
T  11639456 agcttatgaaaataagctaaaaacagc--ttatggacatgtcataagctgttttcataagctcttctaaattgtctcaaaagttcttat 11639370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 153 - 233
Target Start/End: Original strand, 16322879 - 16322957
Alignment:
Q  153 agcttatggaaataagctaaaaacagcttttatgggcatatcatgagttgtttccataaactcttccaaatagtttcacaa 233  Q
    ||||||||||||||||||||||||| |  ||||| ||||  ||| ||||||||| |||| |||| | ||| ||||||||||    
T  16322879 agcttatggaaataagctaaaaacaac--ttatgtgcatgacataagttgtttcgataatctctccaaaacagtttcacaa 16322957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 153 - 241
Target Start/End: Complemental strand, 31517780 - 31517694
Alignment:
Q  153 agcttatggaaataagctaaaaacagcttttatgggcatatcatgagttgtttccataaactcttccaaatagtttcacaagtgcttat 241  Q
    |||||||| ||||||||| ||||||||||  |||  ||| |||||||||||||  ||||  ||| ||||| ||| ||||||||||||||    
T  31517780 agcttatgaaaataagctgaaaacagctt--atgaacatgtcatgagttgttttgataagttctcccaaacagtctcacaagtgcttat 31517694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 100 - 140
Target Start/End: Original strand, 870966 - 871006
Alignment:
Q  100 cgcttatcatataagtgcttatgcataatctattgttataa 140  Q
    ||||||||||||||||||||||| |||| ||||| ||||||    
T  870966 cgcttatcatataagtgcttatgtataaactatttttataa 871006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0590 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0590
Description:

Target: scaffold0590; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 65 - 133
Target Start/End: Complemental strand, 1259 - 1190
Alignment:
Q  65 tggataagcaacttaattaaata-ttataagataaacgcttatcatataagtgcttatgcataatctatt 133  Q
    ||||||| |||||||||||| || |||||  |||||||  ||||||||||||||||||| |||| |||||    
T  1259 tggataaacaacttaattaagtacttatagcataaacgtctatcatataagtgcttatgtataagctatt 1190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0275 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0275
Description:

Target: scaffold0275; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 65 - 133
Target Start/End: Original strand, 2716 - 2785
Alignment:
Q  65 tggataagcaacttaattaaata-ttataagataaacgcttatcatataagtgcttatgcataatctatt 133  Q
    ||||||| |||||||||||| || |||||  |||||||  ||||||||||||||||||| |||| |||||    
T  2716 tggataaacaacttaattaagtacttatagcataaacgtctatcatataagtgcttatgtataagctatt 2785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University