View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12651_low_2 (Length: 621)

Name: NF12651_low_2
Description: NF12651
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12651_low_2
NF12651_low_2
[»] chr3 (24 HSPs)
chr3 (328-604)||(42480204-42480478)
chr3 (1-336)||(42481169-42481501)
chr3 (86-202)||(4169098-4169214)
chr3 (93-193)||(31545625-31545725)
chr3 (94-202)||(44080257-44080364)
chr3 (92-202)||(1705669-1705779)
chr3 (93-202)||(42637956-42638065)
chr3 (93-202)||(3823651-3823761)
chr3 (127-182)||(23163349-23163404)
chr3 (111-201)||(5341877-5341967)
chr3 (112-189)||(27335402-27335479)
chr3 (93-199)||(3785965-3786071)
chr3 (8-202)||(22432330-22432527)
chr3 (109-190)||(13358108-13358189)
chr3 (93-193)||(26308640-26308740)
chr3 (98-177)||(27079301-27079380)
chr3 (98-177)||(27085098-27085177)
chr3 (91-177)||(27707698-27707784)
chr3 (97-162)||(11501310-11501375)
chr3 (93-190)||(19624317-19624414)
chr3 (111-202)||(9710742-9710832)
chr3 (152-190)||(11509915-11509953)
chr3 (122-170)||(23163788-23163836)
chr3 (102-146)||(39126219-39126263)
[»] chr2 (7 HSPs)
chr2 (1-202)||(1400680-1400883)
chr2 (93-199)||(30906051-30906157)
chr2 (93-198)||(43900532-43900637)
chr2 (100-202)||(45305967-45306068)
chr2 (93-189)||(33667328-33667424)
chr2 (50-202)||(28527280-28527431)
chr2 (93-189)||(7378470-7378564)
[»] chr6 (14 HSPs)
chr6 (94-200)||(3620761-3620867)
chr6 (93-202)||(10304700-10304809)
chr6 (27-202)||(3222431-3222610)
chr6 (46-198)||(138668-138820)
chr6 (46-198)||(146689-146841)
chr6 (111-202)||(33815034-33815125)
chr6 (11-193)||(9068415-9068599)
chr6 (93-202)||(22608360-22608469)
chr6 (95-190)||(2834974-2835069)
chr6 (93-148)||(24386266-24386321)
chr6 (86-140)||(2430600-2430654)
chr6 (2-71)||(23595066-23595137)
chr6 (10-71)||(23595272-23595336)
chr6 (113-186)||(9474646-9474718)
[»] chr7 (11 HSPs)
chr7 (10-198)||(21589627-21589818)
chr7 (93-202)||(31303453-31303562)
chr7 (93-190)||(22740659-22740756)
chr7 (93-198)||(28804990-28805094)
chr7 (86-202)||(5083785-5083900)
chr7 (93-192)||(18312837-18312935)
chr7 (111-198)||(20556770-20556857)
chr7 (93-198)||(4290831-4290935)
chr7 (47-190)||(21548464-21548607)
chr7 (112-189)||(32964775-32964852)
chr7 (93-158)||(5174910-5174975)
[»] chr8 (14 HSPs)
chr8 (93-202)||(5321962-5322071)
chr8 (93-202)||(5573780-5573888)
chr8 (93-202)||(38606828-38606937)
chr8 (93-192)||(15714695-15714794)
chr8 (93-198)||(1240901-1241005)
chr8 (111-202)||(31273580-31273671)
chr8 (114-198)||(29367076-29367160)
chr8 (134-199)||(32959563-32959628)
chr8 (102-202)||(31596795-31596894)
chr8 (93-202)||(1251477-1251585)
chr8 (111-192)||(26493355-26493435)
chr8 (93-140)||(24575907-24575954)
chr8 (86-148)||(26914684-26914746)
chr8 (156-202)||(33286217-33286263)
[»] chr1 (10 HSPs)
chr1 (86-198)||(29677078-29677190)
chr1 (93-190)||(34364243-34364340)
chr1 (93-201)||(38951906-38952016)
chr1 (97-193)||(42604227-42604323)
chr1 (111-202)||(29167828-29167918)
chr1 (93-140)||(2569970-2570017)
chr1 (112-190)||(9468120-9468199)
chr1 (111-202)||(25238477-25238567)
chr1 (113-202)||(517433-517522)
chr1 (10-77)||(13350902-13350972)
[»] chr5 (13 HSPs)
chr5 (9-202)||(35922732-35922928)
chr5 (54-187)||(42034771-42034904)
chr5 (49-201)||(33958936-33959088)
chr5 (93-191)||(13312609-13312707)
chr5 (98-202)||(31189578-31189681)
chr5 (93-202)||(22169457-22169566)
chr5 (154-202)||(36169394-36169442)
chr5 (97-170)||(19621477-19621550)
chr5 (93-202)||(38521968-38522076)
chr5 (93-198)||(43461701-43461806)
chr5 (112-189)||(7156105-7156182)
chr5 (115-178)||(43262708-43262771)
chr5 (112-189)||(30704398-30704476)
[»] chr4 (14 HSPs)
chr4 (93-201)||(33179759-33179867)
chr4 (93-202)||(33249616-33249725)
chr4 (1-202)||(1966741-1966941)
chr4 (93-202)||(16583596-16583705)
chr4 (91-179)||(17633339-17633427)
chr4 (98-193)||(35544425-35544519)
chr4 (112-189)||(24669197-24669274)
chr4 (93-202)||(9809074-9809183)
chr4 (98-202)||(8740796-8740899)
chr4 (93-193)||(14351071-14351171)
chr4 (111-202)||(55666844-55666934)
chr4 (114-202)||(9810760-9810848)
chr4 (155-202)||(20874833-20874880)
chr4 (152-190)||(19596794-19596832)
[»] scaffold1126 (1 HSPs)
scaffold1126 (47-202)||(163-318)
[»] scaffold0024 (1 HSPs)
scaffold0024 (112-189)||(112158-112235)
[»] scaffold0251 (1 HSPs)
scaffold0251 (111-202)||(10633-10724)


Alignment Details
Target: chr3 (Bit Score: 246; Significance: 1e-136; HSPs: 24)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 328 - 604
Target Start/End: Complemental strand, 42480478 - 42480204
Alignment:
Q  328 agttaccacatatgcacgaattctcttaggggtccacattgtggtggttgagtgggacccacttgtaatgtatggcccacatacaccaaactcaaccaaa 427  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  42480478 agttaccacatatgcacgaattctcttaggggtccacattgtggtggttgagtgggacccaattgtaatgtatggcccagatacaccaaactcaaccaaa 42480379  T
Q  428 caatttctcataaagttctatataatagcaatccactttgcatcattgaggtcacactcacacacaccttcattcttctacattcttcaaatcaccacta 527  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  42480378 caatttctcataaagttctatataatagcaatccactttgcatcattaaggtcacactcacacacaccttcattcttccacattcttcaaatcaccacta 42480279  T
Q  528 caatctcacagaaacctcatcaatcacaaccatgggttcaacaggtgaaactcaaataacaccaactcacatatcag 604  Q
    ||||||  || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42480278 caatct--caaaaacctcatcaatcacaaccatgggttcaacaggtgaaactcaaataacaccaactcacatatcag 42480204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 1 - 336
Target Start/End: Complemental strand, 42481501 - 42481169
Alignment:
Q  1 tagacacctcttaatgtgtacaccattttgtatcactctacaaaatagttaaccaaatatatagtctgtgtaatcacannnnnnnagttacatgaccact 100  Q
    |||||| || |||||||||| |||||||| ||||||||||||||||||||||||| |||||||||||| |||||||||       ||||||||||||| |    
T  42481501 tagacatcttttaatgtgtataccattttatatcactctacaaaatagttaaccagatatatagtctgagtaatcacatttttttagttacatgaccatt 42481402  T
Q  101 atttttctaaaatttatttgattaactaagtgaaaaaataatgatcacatacattttagttgtgtgaccatatttttcagcttctaaatagtgatcacgc 200  Q
    ||||||  | |||||||||| ||||||||||  |||||||||| |||| ||||||||||||||||||||||||||||||| || ||||||||| ||||||    
T  42481401 attttttcagaatttatttggttaactaagtagaaaaataatggtcacgtacattttagttgtgtgaccatatttttcagtttttaaatagtggtcacgc 42481302  T
Q  201 aaactatatatcttgtttattgaaattttcaaattcaatagtgatac-----aaaggggtatctaccgatattgttctagttatactttttgagtataag 295  Q
    ||||||||||||||||| ||||||||||      |||| ||||||||     |||  ||||||||| ||| |||||  ||||||| | | ||||| ||||    
T  42481301 aaactatatatcttgttaattgaaattt------tcaacagtgatacacattaaaaaggtatctactgatcttgttacagttatattctgtgagtctaag 42481208  T
Q  296 tggtcgctatggactatggatgtatataacccagttaccac 336  Q
    |||||| |||||||||||||||  |||||||||||||||||    
T  42481207 tggtcggtatggactatggatg--tataacccagttaccac 42481169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 86 - 202
Target Start/End: Original strand, 4169098 - 4169214
Alignment:
Q  86 agttacatgaccactatttttctaaaatttatttgattaactaagtgaaaaaataatgatcacatacattttagttgtgtgaccatatttttcagcttct 185  Q
    |||| |||||| |||||||||  | |||||||||| |||||||| || ||||||| || ||||  |||||||||||| || |||| ||||||||||||||    
T  4169098 agttgcatgactactattttttcagaatttatttggttaactaaatggaaaaatagtggtcacgcacattttagttgcgttaccacatttttcagcttct 4169197  T
Q  186 aaatagtgatcacgcaa 202  Q
    |||||||| ||||||||    
T  4169198 aaatagtggtcacgcaa 4169214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 93 - 193
Target Start/End: Complemental strand, 31545725 - 31545625
Alignment:
Q  93 tgaccactatttttctaaaatttatttgattaactaagtgaaaaaataatgatcacatacattttagttgtgtgaccatatttttcagcttctaaatagt 192  Q
    ||||||||||||||| | |||||||||  ||||||||||  ||||||| || |||   |||||||||||||||||||| |||||||||||||||||||||    
T  31545725 tgaccactatttttccagaatttattttgttaactaagtagaaaaatagtggtcatgcacattttagttgtgtgaccacatttttcagcttctaaatagt 31545626  T
Q  193 g 193  Q
    |    
T  31545625 g 31545625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 94 - 202
Target Start/End: Complemental strand, 44080364 - 44080257
Alignment:
Q  94 gaccactatttttctaaaatttatttgattaactaagtgaaaaaataatgatcacatacattttagttgtgtgaccatatttttcagcttctaaatagtg 193  Q
    |||||||||||||| ||||||| |||| ||||||||||| ||||||| ||  |||  ||||||||||| |||||||| |||||||| |||||||||||||    
T  44080364 gaccactatttttccaaaatttttttggttaactaagtggaaaaatagtgggcacgcacattttagtt-tgtgaccacatttttcaacttctaaatagtg 44080266  T
Q  194 atcacgcaa 202  Q
     ||||||||    
T  44080265 gtcacgcaa 44080257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 92 - 202
Target Start/End: Original strand, 1705669 - 1705779
Alignment:
Q  92 atgaccactatttttctaaaatttatttgattaactaagtgaaaaaataatgatcacatacattttagttgtgtgaccatatttttcagcttctaaatag 191  Q
    |||||||||| ||||| | || ||||||| ||||||||| | ||||||| || ||||   |||||||||||  |||||||||||||||||||||||||||    
T  1705669 atgaccactagttttccagaaattatttggttaactaaggggaaaaatagtggtcacgcgcattttagttgcatgaccatatttttcagcttctaaatag 1705768  T
Q  192 tgatcacgcaa 202  Q
    || ||||||||    
T  1705769 tggtcacgcaa 1705779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 93 - 202
Target Start/End: Original strand, 42637956 - 42638065
Alignment:
Q  93 tgaccactatttttctaaaatttatttgattaactaagtgaaaaaataatgatcacatacattttagttgtgtgaccatatttttcagcttctaaatagt 192  Q
    ||||||||||||||  | |||||||||| ||||||||||  ||||||| || | ||   ||||||||||| ||||||| |||||||||||||||||||||    
T  42637956 tgaccactattttttcagaatttatttggttaactaagttgaaaaatagtggttacgcgcattttagttgcgtgaccacatttttcagcttctaaatagt 42638055  T
Q  193 gatcacgcaa 202  Q
    | ||||||||    
T  42638056 ggtcacgcaa 42638065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 93 - 202
Target Start/End: Complemental strand, 3823761 - 3823651
Alignment:
Q  93 tgaccactatttttctaaaatttatttgattaactaagtgaaaaaataatgatcacatacattttagttgtgtgaccata--tttttcagcttctaaata 190  Q
    ||||||||||||||| | |||||||||| ||||||||||| ||||| | || |||||  ||||||||||| |||||||||  ||||||||||| ||||||    
T  3823761 tgaccactatttttccataatttatttggttaactaagtggaaaaa-agtggtcacacgcattttagttgcgtgaccatatttttttcagcttataaata 3823663  T
Q  191 gtgatcacgcaa 202  Q
    ||| ||||||||    
T  3823662 gtggtcacgcaa 3823651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 127 - 182
Target Start/End: Complemental strand, 23163404 - 23163349
Alignment:
Q  127 taagtgaaaaaataatgatcacatacattttagttgtgtgaccatatttttcagct 182  Q
    |||||||||||||||||||||| | |||||||||||||||||||||||||||||||    
T  23163404 taagtgaaaaaataatgatcacgtgcattttagttgtgtgaccatatttttcagct 23163349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 111 - 201
Target Start/End: Complemental strand, 5341967 - 5341877
Alignment:
Q  111 aatttatttgattaactaagtgaaaaaataatgatcacatacattttagttgtgtgaccatatttttcagcttctaaatagtgatcacgca 201  Q
    |||||||||| ||||||||||| ||||||| || ||| ||  ||||||||||| |||||| |||||||| ||||||||||||| |||||||    
T  5341967 aatttatttggttaactaagtggaaaaatagtggtcatatgtattttagttgtatgaccacatttttcaacttctaaatagtggtcacgca 5341877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 112 - 189
Target Start/End: Original strand, 27335402 - 27335479
Alignment:
Q  112 atttatttgattaactaagtgaaaaaataatgatcacatacattttagttgtgtgaccatatttttcagcttctaaat 189  Q
    ||||||||| ||||||||||| ||||||| || |||| |  |||||||||||||||||| ||||||||||||||||||    
T  27335402 atttatttggttaactaagtggaaaaatagtggtcacgtgtattttagttgtgtgaccacatttttcagcttctaaat 27335479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 93 - 199
Target Start/End: Complemental strand, 3786071 - 3785965
Alignment:
Q  93 tgaccactatttttctaaaatttatttgattaactaagtgaaaaaataatgatcacatacattttagttgtgtgaccata-tttttcagcttctaaatag 191  Q
    ||||||||||||||| | |||||||||| ||||||||||| ||||| | || ||||   ||||||||||| ||||||||| ||||||||||| |||||||    
T  3786071 tgaccactatttttccataatttatttggttaactaagtggaaaaa-agtggtcacgcgcattttagttgcgtgaccatattttttcagcttataaatag 3785973  T
Q  192 tgatcacg 199  Q
    || |||||    
T  3785972 tggtcacg 3785965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 8 - 202
Target Start/End: Complemental strand, 22432527 - 22432330
Alignment:
Q  8 ctcttaatgtgtacaccattttgtatcactctacaaaat---agttaaccaaatatatagtctgtgtaatcacannnnnnnagttacatgaccactattt 104  Q
    ||||||||||||||||| ||||||| |||| |  |||||   ||| || ||||||||| |||||||| |  |||       |||| ||||||||||||||    
T  22432527 ctcttaatgtgtacacccttttgtagcactttgaaaaatttgagtaaatcaaatatatggtctgtgtgactacatttttttagttgcatgaccactattt 22432428  T
Q  105 ttctaaaatttatttgattaactaagtgaaaaaataatgatcacatacattttagttgtgtgaccatatttttcagcttctaaatagtgatcacgcaa 202  Q
    ||  | |||||||||| | ||||| ||| ||||||| ||  ||||  |||||||||||  |||||| |||||||||||| |||||||||  |||||||    
T  22432427 tttcataatttatttggtcaactatgtggaaaaatagtggacacacgcattttagttgattgaccacatttttcagcttttaaatagtggacacgcaa 22432330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 109 - 190
Target Start/End: Original strand, 13358108 - 13358189
Alignment:
Q  109 aaaatttatttgattaactaagtgaaaaaataatgatcacatacattttagttgtgtgaccatatttttcagcttctaaata 190  Q
    |||||||||||| ||||||| ||| ||||||| || | ||   ||||||| |||||||||||||||||||||||||||||||    
T  13358108 aaaatttatttggttaactatgtggaaaaatagtggtaacgcgcattttaattgtgtgaccatatttttcagcttctaaata 13358189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 93 - 193
Target Start/End: Original strand, 26308640 - 26308740
Alignment:
Q  93 tgaccactatttttctaaaatttatttgattaactaagtgaaaaaataatgatcacatacattttagttgtgtgaccatatttttcagcttctaaatagt 192  Q
    ||||||||| ||||| | |||||||||| |||| |||||| ||||||| || ||||   ||||||| ||| ||||||| ||| |||||||||||||||||    
T  26308640 tgaccactaattttccagaatttatttggttaagtaagtggaaaaatagtggtcacgcgcattttaattgcgtgaccacattattcagcttctaaatagt 26308739  T
Q  193 g 193  Q
    |    
T  26308740 g 26308740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 98 - 177
Target Start/End: Original strand, 27079301 - 27079380
Alignment:
Q  98 actatttttctaaaatttatttgattaactaagtgaaaaaataatgatcacatacattttagttgtgtgaccatattttt 177  Q
    |||||||||||| |||||||||||||||||||||| |||||| ||| ||||   |||||||| |  ||||||| ||||||    
T  27079301 actatttttctataatttatttgattaactaagtggaaaaatgatggtcacgcgcattttagctacgtgaccacattttt 27079380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 98 - 177
Target Start/End: Original strand, 27085098 - 27085177
Alignment:
Q  98 actatttttctaaaatttatttgattaactaagtgaaaaaataatgatcacatacattttagttgtgtgaccatattttt 177  Q
    |||||||||||| |||||||||||||||||||||| |||||| ||| ||||   |||||||| |  ||||||| ||||||    
T  27085098 actatttttctataatttatttgattaactaagtggaaaaatgatggtcacgcgcattttagctacgtgaccacattttt 27085177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 91 - 177
Target Start/End: Complemental strand, 27707784 - 27707698
Alignment:
Q  91 catgaccactatttttctaaaatttatttgattaactaagtgaaaaaataatgatcacatacattttagttgtgtgaccatattttt 177  Q
    |||| |||||||||||| | |||||||||| ||||  ||||||||||||| || |||   |||||||||||||| ||||| ||||||    
T  27707784 catgtccactatttttccagaatttatttggttaatcaagtgaaaaaatagtggtcatgcacattttagttgtgcgaccacattttt 27707698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 97 - 162
Target Start/End: Complemental strand, 11501375 - 11501310
Alignment:
Q  97 cactatttttctaaaatttatttgattaactaagtgaaaaaataatgatcacatacattttagttg 162  Q
    |||||||||| ||||||||||||| |||||||| || ||||||| || ||||  ||||||||||||    
T  11501375 cactatttttttaaaatttatttggttaactaattggaaaaatagtggtcacgcacattttagttg 11501310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 93 - 190
Target Start/End: Complemental strand, 19624414 - 19624317
Alignment:
Q  93 tgaccactatttttctaaaatttatttgattaactaagtgaaaaaataatgatcacatacattttagttgtgtgaccatatttttcagcttctaaata 190  Q
    ||||||| ||||||| | ||||||| || ||||||||||| ||||||| || |||| | ||||||||||| ||| ||| || ||| ||||| ||||||    
T  19624414 tgaccacaatttttccagaatttatgtggttaactaagtggaaaaatagtggtcacgtgcattttagttgggtggccacatattttagcttataaata 19624317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 111 - 202
Target Start/End: Original strand, 9710742 - 9710832
Alignment:
Q  111 aatttatttgattaactaagtgaaaaaataatgatcacatacattttagttgtgtgaccatatttttcagcttctaaatagtgatcacgcaa 202  Q
    |||||||||| ||||||||||| ||||||| || |||  |  | |||||||| ||||||| | |||||||||||||| ||||| ||||||||    
T  9710742 aatttatttggttaactaagtggaaaaatagtggtcaagtgta-tttagttgcgtgaccacagttttcagcttctaagtagtggtcacgcaa 9710832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 152 - 190
Target Start/End: Complemental strand, 11509953 - 11509915
Alignment:
Q  152 cattttagttgtgtgaccatatttttcagcttctaaata 190  Q
    ||||||||||| ||||||| |||||||||||||||||||    
T  11509953 cattttagttgcgtgaccacatttttcagcttctaaata 11509915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 122 - 170
Target Start/End: Complemental strand, 23163836 - 23163788
Alignment:
Q  122 ttaactaagtgaaaaaataatgatcacatacattttagttgtgtgacca 170  Q
    ||||||||||||| ||||| || |||| ||||||||||||| |||||||    
T  23163836 ttaactaagtgaagaaatagtggtcacgtacattttagttgcgtgacca 23163788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 102 - 146
Target Start/End: Complemental strand, 39126263 - 39126219
Alignment:
Q  102 tttttctaaaatttatttgattaactaagtgaaaaaataatgatc 146  Q
    ||||| ||||||||||||| ||||||||||| ||||||| |||||    
T  39126263 tttttttaaaatttatttggttaactaagtggaaaaatagtgatc 39126219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 74; Significance: 1e-33; HSPs: 7)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 1400680 - 1400883
Alignment:
Q  1 tagacacctcttaatgtgtacaccattttgtatcactctacaaaat---agttaaccaaatatatagtctgtgtaatcacannnnnnnagttacatgacc 97  Q
    |||||||| ||||||||||||||| ||||||| || |||  |||||   |||||||||||||||| || ||||| | ||||       |||| | |||||    
T  1400680 tagacacc-cttaatgtgtacacccttttgtaccaatctgaaaaatttcagttaaccaaatatatggtatgtgtgaccacattttttaagttgcgtgacc 1400778  T
Q  98 actatttttctaaaatttatttgattaactaagtgaaaaaataatgatcacatacattttagttgtgtgaccatatttttcagcttctaaatagtgatca 197  Q
    |||||||||| | |||||||||| ||||||||||| ||||||| |||||||   |||||| |||||||||||| |||||||||||||||||||||| |||    
T  1400779 actatttttccataatttatttggttaactaagtggaaaaatagtgatcacgcgcatttttgttgtgtgaccacatttttcagcttctaaatagtggtca 1400878  T
Q  198 cgcaa 202  Q
    |||||    
T  1400879 cgcaa 1400883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 93 - 199
Target Start/End: Original strand, 30906051 - 30906157
Alignment:
Q  93 tgaccactatttttctaaaatttatttgattaactaagtgaaaaaataatgatcacatacattttagttgtgtgaccatatttttcagcttctaaatagt 192  Q
    |||||||||| |||| | |||||||||| ||||||||||| ||||||| || ||||   ||||||||||| ||||||| |||||||||| | ||||||||    
T  30906051 tgaccactatgtttccataatttatttgcttaactaagtggaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcatttaaatagt 30906150  T
Q  193 gatcacg 199  Q
    | |||||    
T  30906151 ggtcacg 30906157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 93 - 198
Target Start/End: Complemental strand, 43900637 - 43900532
Alignment:
Q  93 tgaccactatttttctaaaatttatttgattaactaagtgaaaaaataatgatcacatacattttagttgtgtgaccatatttttcagcttctaaatagt 192  Q
    ||||| ||||||||  | |||||||||| |||||||| |  ||||||| || |||| | ||||||||||| ||||||| |||||||||||||||||||||    
T  43900637 tgacccctattttttcagaatttatttggttaactaaatagaaaaatagtggtcacgtgcattttagttgcgtgaccacatttttcagcttctaaatagt 43900538  T
Q  193 gatcac 198  Q
    | ||||    
T  43900537 ggtcac 43900532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 100 - 202
Target Start/End: Complemental strand, 45306068 - 45305967
Alignment:
Q  100 tatttttctaaaatttatttgattaactaagtgaaaaaataatgatcacatacattttagttgtgtgaccatatttttcagcttctaaatagtgatcacg 199  Q
    ||||||| || |||||||| | ||||||||||| ||||||| || ||||  |||||||||||| ||| ||| |||||||||||| ||||| ||| |||||    
T  45306068 tatttttttagaatttattcggttaactaagtggaaaaatagtggtcacgcacattttagttgcgtggccacatttttcagcttttaaat-gtggtcacg 45305970  T
Q  200 caa 202  Q
    |||    
T  45305969 caa 45305967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 93 - 189
Target Start/End: Complemental strand, 33667424 - 33667328
Alignment:
Q  93 tgaccactatttttctaaaatttatttgattaactaagtgaaaaaataatgatcacatacattttagttgtgtgaccatatttttcagcttctaaat 189  Q
    ||||||||||||||  | ||| |||||| ||||||||||| ||||||| || | ||  |||||||| ||| ||||||| |||||||| |||||||||    
T  33667424 tgaccactattttttcagaatatatttggttaactaagtggaaaaatagtggttacgcacattttaattgcgtgaccacatttttcaacttctaaat 33667328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 50 - 202
Target Start/End: Original strand, 28527280 - 28527431
Alignment:
Q  50 taaccaaatatatagtctgtgtaatcacannnnnnnagttacatgaccactatttttctaaaatttatttgattaactaagtgaaaaaataatgatcaca 149  Q
    ||||||||||||| |||||||| | ||||       |||| | ||||||||||||||| | |||||||||| |||||||| || ||||||| || |||||    
T  28527280 taaccaaatatatggtctgtgtgaccacatttttttagttgcgtgaccactatttttccagaatttatttggttaactaattggaaaaatagtggtcaca 28527379  T
Q  150 tacattttagttgtgtgaccatatttttcagcttctaaatagtgatcacgcaa 202  Q
      ||| ||||||  ||||| | ||||| ||||||||||||  || ||||||||    
T  28527380 cgcatgttagtt-cgtgacaacattttccagcttctaaattatggtcacgcaa 28527431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 93 - 189
Target Start/End: Original strand, 7378470 - 7378564
Alignment:
Q  93 tgaccactatttttctaaaatttatttgattaactaagtgaaaaaataatgatcacatacattttagttgtgtgaccatatttttcagcttctaaat 189  Q
    |||| ||||||||| ||||||||| | | |||| |||||| || |||| || ||||| |||||||||||| || ||||||||||| |||||||||||    
T  7378470 tgactactatttttttaaaatttaatgg-ttaattaagtggaataatagtggtcacacacattttagttgcgtcaccatattttt-agcttctaaat 7378564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 67; Significance: 2e-29; HSPs: 14)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 94 - 200
Target Start/End: Original strand, 3620761 - 3620867
Alignment:
Q  94 gaccactatttttctaaaatttatttgattaactaagtgaaaaaataatgatcacatacattttagttgtgtgaccatatttttcagcttctaaatagtg 193  Q
    |||||||||||||  | |||||||||| ||||||||||||||||||| || ||||||| ||||||||||||||| || |||||||| |||||||||||||    
T  3620761 gaccactattttttcagaatttatttggttaactaagtgaaaaaatagtggtcacatatattttagttgtgtgatcacatttttcaacttctaaatagtg 3620860  T
Q  194 atcacgc 200  Q
    |||||||    
T  3620861 atcacgc 3620867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 93 - 202
Target Start/End: Original strand, 10304700 - 10304809
Alignment:
Q  93 tgaccactatttttctaaaatttatttgattaactaagtgaaaaaataatgatcacatacattttagttgtgtgaccatatttttcagcttctaaatagt 192  Q
    |||||||| |||||| | |||||||||| ||||||||||||||||||| || ||||   ||||||||||| |||||| |||||||| |||||||||||||    
T  10304700 tgaccactttttttccagaatttatttggttaactaagtgaaaaaatagtggtcacgcgcattttagttgcgtgaccgtatttttctgcttctaaatagt 10304799  T
Q  193 gatcacgcaa 202  Q
    ||||||||||    
T  10304800 gatcacgcaa 10304809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 27 - 202
Target Start/End: Complemental strand, 3222610 - 3222431
Alignment:
Q  27 tttgtatcactctacaaaa---tagttaaccaaatatatagtctgtgtaatcacannnnnnnagttacatgaccactat-ttttctaaaatttatttgat 122  Q
    |||||||||||||| ||||   ||||||| ||||||||| |||||||| | ||||       |||||| |||||||||| ||||| | |||||||||| |    
T  3222610 tttgtatcactctaaaaaagattagttaatcaaatatatggtctgtgtgaccacatttttctagttacgtgaccactatattttccagaatttatttggt 3222511  T
Q  123 taactaagtgaaaaaataatgatcacatacattttagttgtgtgaccatatttttcagcttctaaatagtgatcacgcaa 202  Q
    |||||||||| ||||||| || |||| ||||||||||||| ||||||  |||||||||| | ||||||||| ||||||||    
T  3222510 taactaagtggaaaaatagtggtcacgtacattttagttgcgtgaccgcatttttcagcatttaaatagtggtcacgcaa 3222431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 46 - 198
Target Start/End: Original strand, 138668 - 138820
Alignment:
Q  46 tagttaaccaaatatatagtctgtgtaatcacannnnnnnagttacatgaccactatttttctaaaatttatttgattaactaagtgaaaaaataatgat 145  Q
    ||||||||||||||||| ||||||||   ||||       |||| | ||||||||||||||  | |||||||||| || |||||||| ||||||| || |    
T  138668 tagttaaccaaatatatggtctgtgtggccacattttcttagttgcgtgaccactattttttcagaatttatttggttgactaagtggaaaaatagtggt 138767  T
Q  146 cacatacattttagttgtgtgaccatatttttcagcttctaaatagtgatcac 198  Q
    | |  ||| |||||||| ||||||| |||||||||||||||||||||| ||||    
T  138768 cgcgcacaatttagttgcgtgaccacatttttcagcttctaaatagtggtcac 138820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 46 - 198
Target Start/End: Original strand, 146689 - 146841
Alignment:
Q  46 tagttaaccaaatatatagtctgtgtaatcacannnnnnnagttacatgaccactatttttctaaaatttatttgattaactaagtgaaaaaataatgat 145  Q
    ||||||||||||||||| ||||||||   ||||       |||| | ||||||||||||||  | |||||||||| || |||||||| ||||||| || |    
T  146689 tagttaaccaaatatatggtctgtgtggccacattttcttagttgcgtgaccactattttttcagaatttatttggttgactaagtggaaaaatagtggt 146788  T
Q  146 cacatacattttagttgtgtgaccatatttttcagcttctaaatagtgatcac 198  Q
    | |  ||| |||||||| ||||||| |||||||||||||||||||||| ||||    
T  146789 cgcgcacaatttagttgcgtgaccacatttttcagcttctaaatagtggtcac 146841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 111 - 202
Target Start/End: Original strand, 33815034 - 33815125
Alignment:
Q  111 aatttatttgattaactaagtgaaaaaataatgatcacatacattttagttgtgtgaccatatttttcagcttctaaatagtgatcacgcaa 202  Q
    |||||||||| ||||||||||| ||||||  || ||||   ||||||||||| ||||||| |||||||||||||||||||||| ||||||||    
T  33815034 aatttatttggttaactaagtggaaaaatggtggtcacgcgcattttagttgcgtgaccacatttttcagcttctaaatagtggtcacgcaa 33815125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 11 - 193
Target Start/End: Complemental strand, 9068599 - 9068415
Alignment:
Q  11 ttaatgtgtacaccattttgtatcactctacaaaat---agttaaccaaatatatagtctgtgtaatcacannnnnnnagttacatgaccactatttttc 107  Q
    |||||||||||||| ||||||| ||||||  |||||   |||||| ||||||||| || ||||| | ||||       |||| | |||||||||||||||    
T  9068599 ttaatgtgtacacccttttgtaccactctgaaaaattttagttaatcaaatatatggtatgtgtgaccacatttttttagttgcgtgaccactatttttc 9068500  T
Q  108 taaaatttatttgattaactaagtgaaaaaataatgatcacatacattttagttgtgtgaccatatttttcagcttctaaatagtg 193  Q
     | || ||||||| ||| ||||||| ||||||| | |||||   |||||||| |||||||||| |||||||||||| |||||||||    
T  9068499 cagaacttatttgttta-ctaagtggaaaaatagtaatcacgcgcattttagatgtgtgaccacatttttcagcttttaaatagtg 9068415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 93 - 202
Target Start/End: Complemental strand, 22608469 - 22608360
Alignment:
Q  93 tgaccactatttttctaaaatttatttgattaactaagtgaaaaaataatgatcacatacattttagttgtgtgaccatatttttcagcttctaaatagt 192  Q
    ||||||||| ||||  | || |||||||||||||||| | |||||||| || |||   ||||||||||||  |||||| |||||||||||||||||||||    
T  22608469 tgaccactaatttttcagaaattatttgattaactaattcaaaaaatagtggtcatgcacattttagttgcatgaccacatttttcagcttctaaatagt 22608370  T
Q  193 gatcacgcaa 202  Q
    | ||||||||    
T  22608369 ggtcacgcaa 22608360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 95 - 190
Target Start/End: Complemental strand, 2835069 - 2834974
Alignment:
Q  95 accactatttttctaaaatttatttgattaactaagtgaaaaaataatgatcacatacattttagttgtgtgaccatatttttcagcttctaaata 190  Q
    ||||||||||||| | |||||||||  ||| ||||||| |||||||||| ||||    ||||||||||  ||||||||||||||||||| ||||||    
T  2835069 accactatttttccataatttatttagttagctaagtggaaaaataatggtcacgcgtattttagttgcatgaccatatttttcagcttttaaata 2834974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 93 - 148
Target Start/End: Original strand, 24386266 - 24386321
Alignment:
Q  93 tgaccactatttttctaaaatttatttgattaactaagtgaaaaaataatgatcac 148  Q
    ||||||||||| ||||  |||||||||| |||||||||||||||| || |||||||    
T  24386266 tgaccactattattcttgaatttatttggttaactaagtgaaaaagtagtgatcac 24386321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 86 - 140
Target Start/End: Original strand, 2430600 - 2430654
Alignment:
Q  86 agttacatgaccactatttttctaaaatttatttgattaactaagtgaaaaaata 140  Q
    |||| ||||||||||||||||  | |||||||||| ||||||||||| |||||||    
T  2430600 agttgcatgaccactattttttcagaatttatttggttaactaagtggaaaaata 2430654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 2 - 71
Target Start/End: Original strand, 23595066 - 23595137
Alignment:
Q  2 agacacctcttaatgtgtacaccattttgtatcactctacaaaat---agttaaccaaatatatagtctgtgt 71  Q
    |||||||| |||||||||||||| ||||||||||||||  |||||   ||||||| |||||||| ||||||||    
T  23595066 agacacct-ttaatgtgtacacccttttgtatcactctcgaaaatttaagttaactaaatatatggtctgtgt 23595137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 10 - 71
Target Start/End: Complemental strand, 23595336 - 23595272
Alignment:
Q  10 cttaatgtgtacaccattttgtatcactctacaaaat---agttaaccaaatatatagtctgtgt 71  Q
    |||||| |||||||| |||||||| |||||| |||||   | |||||||||||||||||||||||    
T  23595336 cttaatatgtacacccttttgtattactctaaaaaatttcaattaaccaaatatatagtctgtgt 23595272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 113 - 186
Target Start/End: Complemental strand, 9474718 - 9474646
Alignment:
Q  113 tttatttgattaactaagtgaaaaaataatgatcacatacattttagttgtgtgaccatatttttcagcttcta 186  Q
    |||||||| ||||||||||||||||||| || |||||  ||||||| ||  ||||||| |||||| ||||||||    
T  9474718 tttatttggttaactaagtgaaaaaatagtggtcacacgcatttta-tttcgtgaccacattttttagcttcta 9474646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 65; Significance: 3e-28; HSPs: 11)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 10 - 198
Target Start/End: Complemental strand, 21589818 - 21589627
Alignment:
Q  10 cttaatgtgtacaccattttgtatcactctacaaaat---agttaaccaaatatatagtctgtgtaatcacannnnnnnagttacatgaccactattttt 106  Q
    ||||||||||||| |  ||| || ||||||| |||||   ||||| |||||||||| |||||||| | ||||       |||| ||||||||||||||||    
T  21589818 cttaatgtgtacatccgtttataccactctaaaaaatttcagttatccaaatatatggtctgtgtgaccacatttttttagttgcatgaccactattttt 21589719  T
Q  107 ctaaaatttatttgattaactaagtgaaaaaataatgatcacatacattttagttgtgtgaccatatttttcagcttctaaatagtgatcac 198  Q
    | | || |||||||||||| |||||| ||||||| || |||||  |||||||||||  |||||| |||||||||||||||||||||||||||    
T  21589718 ccagaacttatttgattaattaagtggaaaaatagtggtcacacgcattttagttgcatgaccacatttttcagcttctaaatagtgatcac 21589627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 93 - 202
Target Start/End: Complemental strand, 31303562 - 31303453
Alignment:
Q  93 tgaccactatttttctaaaatttatttgattaactaagtgaaaaaataatgatcacatacattttagttgtgtgaccatatttttcagcttctaaatagt 192  Q
    |||||||||| |||| | |||||||||| ||||||||||| ||||||| || ||||  ||||||||||||  |||||| |||||||||||||||||||||    
T  31303562 tgaccactatgtttccagaatttatttggttaactaagtggaaaaatagtggtcacgcacattttagttgcatgaccacatttttcagcttctaaatagt 31303463  T
Q  193 gatcacgcaa 202  Q
    | ||||||||    
T  31303462 ggtcacgcaa 31303453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 93 - 190
Target Start/End: Original strand, 22740659 - 22740756
Alignment:
Q  93 tgaccactatttttctaaaatttatttgattaactaagtgaaaaaataatgatcacatacattttagttgtgtgaccatatttttcagcttctaaata 190  Q
    |||| |||||||||  | |||||||||| ||||||||||| |||||||||||||||  | |||||||||| |||||||||||||||||||| ||||||    
T  22740659 tgactactattttttcagaatttatttggttaactaagtggaaaaataatgatcacgcatattttagttgcgtgaccatatttttcagcttttaaata 22740756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 93 - 198
Target Start/End: Original strand, 28804990 - 28805094
Alignment:
Q  93 tgaccactatttttctaaaatttatttgattaactaagtgaaaaaataatgatcacatacattttagttgtgtgaccatatttttcagcttctaaatagt 192  Q
    |||||||||| |||| | |||||||||| ||||||||||| ||||||| || || |   |||||| |||||||||||| |||||||||||||||||||||    
T  28804990 tgaccactatatttccataatttatttggttaactaagtggaaaaatagtggtc-cgcgcattttggttgtgtgaccacatttttcagcttctaaatagt 28805088  T
Q  193 gatcac 198  Q
    ||||||    
T  28805089 gatcac 28805094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 86 - 202
Target Start/End: Original strand, 5083785 - 5083900
Alignment:
Q  86 agttacatgaccactatttttctaaaatttatttgattaactaagtgaaaaaataatgatcacatacattttagttgtgtgaccatatttttcagcttct 185  Q
    |||||| ||||||||||||||||| |||||||||  ||||| ||||  ||||||| || ||||   ||||| ||||| |||||||||||||||| |||||    
T  5083785 agttacgtgaccactatttttctagaatttatttcgttaacaaagttgaaaaatagtggtcacccgcattt-agttgcgtgaccatatttttcaacttct 5083883  T
Q  186 aaatagtgatcacgcaa 202  Q
    |||||||| ||||||||    
T  5083884 aaatagtggtcacgcaa 5083900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 93 - 192
Target Start/End: Complemental strand, 18312935 - 18312837
Alignment:
Q  93 tgaccactatttttctaaaatttatttgattaactaagtgaaaaaataatgatcacatacattttagttgtgtgaccatatttttcagcttctaaatagt 192  Q
    ||||||||||||||| | |||||||| | ||||||||||| ||||||| || |||||| ||||||||||| |||| || | |||||||||||||||||||    
T  18312935 tgaccactatttttcaagaatttattaggttaactaagtggaaaaatagtggtcacatgcattttagttgcgtgagcaca-ttttcagcttctaaatagt 18312837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 111 - 198
Target Start/End: Complemental strand, 20556857 - 20556770
Alignment:
Q  111 aatttatttgattaactaagtgaaaaaataatgatcacatacattttagttgtgtgaccatatttttcagcttctaaatagtgatcac 198  Q
    |||||||||| ||||||||||| ||||||| || ||||    |||||||||| ||||||| |||||||||||||||||||||| ||||    
T  20556857 aatttatttggttaactaagtggaaaaatattggtcacgcgtattttagttgcgtgaccacatttttcagcttctaaatagtggtcac 20556770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 93 - 198
Target Start/End: Complemental strand, 4290935 - 4290831
Alignment:
Q  93 tgaccactatttttctaaaatttatttgattaactaagtgaaaaaataatgatcacatacattttagttgtgtgaccatatttttcagcttctaaatagt 192  Q
    ||||||||| ||||  | |||||||||| ||||||||||| ||||||| || ||||  ||| || ||||| ||||||| |||||||| ||||||||||||    
T  4290935 tgaccactagtttttcagaatttatttggttaactaagtggaaaaatagtggtcacgcacactt-agttgcgtgaccacatttttcaacttctaaatagt 4290837  T
Q  193 gatcac 198  Q
    | ||||    
T  4290836 ggtcac 4290831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 47 - 190
Target Start/End: Complemental strand, 21548607 - 21548464
Alignment:
Q  47 agttaaccaaatatatagtctgtgtaatcacannnnnnnagttacatgaccactatttttctaaaatttatttgattaactaagtgaaaaaataatgatc 146  Q
    ||||||| |||||||| |||||||| |||| |       |||| | ||||||||||||||| | |||||||||| ||||||||||| ||||| | || |     
T  21548607 agttaactaaatatatggtctgtgtgatcatatttgtttagttgcgtgaccactatttttccagaatttatttggttaactaagtggaaaaacagtggtt 21548508  T
Q  147 acatacattttagttgtgtgaccatatttttcagcttctaaata 190  Q
    ||   ||||  ||||| ||||||| |||||||||||| ||||||    
T  21548507 acgcgcattcgagttgcgtgaccacatttttcagcttttaaata 21548464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 112 - 189
Target Start/End: Complemental strand, 32964852 - 32964775
Alignment:
Q  112 atttatttgattaactaagtgaaaaaataatgatcacatacattttagttgtgtgaccatatttttcagcttctaaat 189  Q
    ||||||| | |||| |||||| ||||||| || |||| | ||||||||||   |||||||||||||||||||||||||    
T  32964852 atttattaggttaattaagtggaaaaatagtggtcacgtgcattttagttacatgaccatatttttcagcttctaaat 32964775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 93 - 158
Target Start/End: Complemental strand, 5174975 - 5174910
Alignment:
Q  93 tgaccactatttttctaaaatttatttgattaactaagtgaaaaaataatgatcacatacatttta 158  Q
    ||||||||| ||||  | |||||||||||||||||||||| ||||||| || ||||  ||||||||    
T  5174975 tgaccactaatttttcagaatttatttgattaactaagtgtaaaaatagtggtcacgcacatttta 5174910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 62; Significance: 2e-26; HSPs: 14)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 93 - 202
Target Start/End: Original strand, 5321962 - 5322071
Alignment:
Q  93 tgaccactatttttctaaaatttatttgattaactaagtgaaaaaataatgatcacatacattttagttgtgtgaccatatttttcagcttctaaatagt 192  Q
    |||||||||||||| || |||||||||| ||||||||||| ||||||| || ||||   ||||||||||| |||| |||||||||||||||||||||| |    
T  5321962 tgaccactatttttttagaatttatttggttaactaagtggaaaaatagtggtcacgcgcattttagttgcgtgatcatatttttcagcttctaaataat 5322061  T
Q  193 gatcacgcaa 202  Q
    ||||||||||    
T  5322062 gatcacgcaa 5322071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 93 - 202
Target Start/End: Complemental strand, 5573888 - 5573780
Alignment:
Q  93 tgaccactatttttctaaaatttatttgattaactaagtgaaaaaataatgatcacatacattttagttgtgtgaccatatttttcagcttctaaatagt 192  Q
    ||||||||||||||| |||||||||||| ||||||||||| ||||||| || |||| | ||||||||||   |||||| |||||||| ||||||||||||    
T  5573888 tgaccactatttttc-aaaatttatttggttaactaagtggaaaaatagtggtcacgtgcattttagttccatgaccacatttttcaacttctaaatagt 5573790  T
Q  193 gatcacgcaa 202  Q
    | ||||||||    
T  5573789 ggtcacgcaa 5573780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 93 - 202
Target Start/End: Original strand, 38606828 - 38606937
Alignment:
Q  93 tgaccactatttttctaaaatttatttgattaactaagtgaaaaaataatgatcacatacattttagttgtgtgaccatatttttcagcttctaaatagt 192  Q
    |||||||||| |||| | |||||||||| ||||||||||| ||||||| || |||||  |||||| |||| ||||||| |||||||||||||||||||||    
T  38606828 tgaccactatgtttccagaatttatttggttaactaagtggaaaaatagtggtcacacgcattttcgttgcgtgaccacatttttcagcttctaaatagt 38606927  T
Q  193 gatcacgcaa 202  Q
    | | ||||||    
T  38606928 ggtaacgcaa 38606937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 93 - 192
Target Start/End: Original strand, 15714695 - 15714794
Alignment:
Q  93 tgaccactatttttctaaaatttatttgattaactaagtgaaaaaataatgatcacatacattttagttgtgtgaccatatttttcagcttctaaatagt 192  Q
    ||||||||||||||   ||||||||||| ||||||||||| ||||||| || ||||  |||||||||||  |||||||||||||||||||| ||||||||    
T  15714695 tgaccactattttttcgaaatttatttggttaactaagtggaaaaatagtggtcacggacattttagttacgtgaccatatttttcagcttttaaatagt 15714794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 93 - 198
Target Start/End: Original strand, 1240901 - 1241005
Alignment:
Q  93 tgaccactatttttctaaaatttatttgattaactaagtgaaaaaataatgatcacatacattttagttgtgtgaccatatttttcagcttctaaatagt 192  Q
    ||||||||||||||| | |||||||||| |||||||||||  |||||| || ||||  |||||||||||   |||||| |||||||||||||||||||||    
T  1240901 tgaccactatttttccataatttatttggttaactaagtgggaaaatagtggtcacgcacattttagtt-catgaccacatttttcagcttctaaatagt 1240999  T
Q  193 gatcac 198  Q
    | ||||    
T  1241000 ggtcac 1241005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 111 - 202
Target Start/End: Original strand, 31273580 - 31273671
Alignment:
Q  111 aatttatttgattaactaagtgaaaaaataatgatcacatacattttagttgtgtgaccatatttttcagcttctaaatagtgatcacgcaa 202  Q
    |||||||||| |||||| ||||||||||||  | |||| | |||||||| ||  ||||||||||||||||||||||||||| | ||||||||    
T  31273580 aatttatttggttaacttagtgaaaaaatagcgttcacgtgcattttagctgcatgaccatatttttcagcttctaaataggggtcacgcaa 31273671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 114 - 198
Target Start/End: Original strand, 29367076 - 29367160
Alignment:
Q  114 ttatttgattaactaagtgaaaaaataatgatcacatacattttagttgtgtgaccatatttttcagcttctaaatagtgatcac 198  Q
    ||||||| ||||||||||| ||||||| || ||||   ||||||||||| ||||||| ||||||||||||| |||||||| ||||    
T  29367076 ttatttggttaactaagtggaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttcaaaatagtggtcac 29367160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 134 - 199
Target Start/End: Complemental strand, 32959628 - 32959563
Alignment:
Q  134 aaaaataatgatcacatacattttagttgtgtgaccatatttttcagcttctaaatagtgatcacg 199  Q
    ||||||| || ||||| ||||||||||||||||||||||||||| ||||||| ||| ||| |||||    
T  32959628 aaaaatagtggtcacacacattttagttgtgtgaccatattttttagcttcttaatggtggtcacg 32959563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 102 - 202
Target Start/End: Complemental strand, 31596894 - 31596795
Alignment:
Q  102 tttttctaaaatttatttgattaactaagtgaaaaaataatgatcacatacattttagttgtgtgaccatatttttcagcttctaaatagtgatcacgca 201  Q
    |||||| | |||||||||| |||| |||||| ||||||| |||| |||  ||||| |||||| |||||| |||||||| ||||||||||||| | |||||    
T  31596894 tttttccataatttatttggttaattaagtggaaaaatagtgattacacgcattt-agttgtctgaccacatttttcatcttctaaatagtggtaacgca 31596796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 93 - 202
Target Start/End: Original strand, 1251477 - 1251585
Alignment:
Q  93 tgaccactatttttctaaaatttatttgattaactaagtgaaaaaataatgatcacatacattttagttgtgtgaccatatttttcagcttctaaatagt 192  Q
    ||||||||||||||| | |||||||||| |||||||||||  |||||| || || |  |||||||||||   ||| || ||||||||| || ||||||||    
T  1251477 tgaccactatttttccataatttatttggttaactaagtgggaaaatagtggtcgcgcacattttagtt-catgatcacatttttcaggttttaaatagt 1251575  T
Q  193 gatcacgcaa 202  Q
    | ||||||||    
T  1251576 ggtcacgcaa 1251585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 111 - 192
Target Start/End: Original strand, 26493355 - 26493435
Alignment:
Q  111 aatttatttgattaactaagtgaaaaaataatgatcacatacattttagttgtgtgaccatatttttcagcttctaaatagt 192  Q
    ||||||||||||||||||| || ||||||| |  ||||   || |||||||| ||||||| |||||||||||||||||||||    
T  26493355 aatttatttgattaactaaatggaaaaatagttgtcacgcgca-tttagttgcgtgaccacatttttcagcttctaaatagt 26493435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 93 - 140
Target Start/End: Original strand, 24575907 - 24575954
Alignment:
Q  93 tgaccactatttttctaaaatttatttgattaactaagtgaaaaaata 140  Q
    ||||||||||||||| | |||||||||| |||| ||||||||||||||    
T  24575907 tgaccactatttttccagaatttatttggttaaataagtgaaaaaata 24575954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 86 - 148
Target Start/End: Original strand, 26914684 - 26914746
Alignment:
Q  86 agttacatgaccactatttttctaaaatttatttgattaactaagtgaaaaaataatgatcac 148  Q
    |||||| ||||||||||||||| | |||||||||| |||| | |||| |||||||||| ||||    
T  26914684 agttacgtgaccactatttttcaagaatttatttggttaattgagtggaaaaataatggtcac 26914746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 156 - 202
Target Start/End: Complemental strand, 33286263 - 33286217
Alignment:
Q  156 ttagttgtgtgaccatatttttcagcttctaaatagtgatcacgcaa 202  Q
    ||||||| ||||||| ||||||||||||||||| |||| ||||||||    
T  33286263 ttagttgcgtgaccacatttttcagcttctaaaaagtggtcacgcaa 33286217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 61; Significance: 7e-26; HSPs: 10)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 86 - 198
Target Start/End: Original strand, 29677078 - 29677190
Alignment:
Q  86 agttacatgaccactatttttctaaaatttatttgattaactaagtgaaaaaataatgatcacatacattttagttgtgtgaccatatttttcagcttct 185  Q
    |||| ||||||||||||||||  | |||||||||| ||||||||||| ||||||| || ||||  |||||||||||| ||||||| ||||||||||||||    
T  29677078 agttgcatgaccactattttttcagaatttatttggttaactaagtggaaaaatagtggtcacgcacattttagttgcgtgaccacatttttcagcttct 29677177  T
Q  186 aaatagtgatcac 198  Q
    |||||||| ||||    
T  29677178 aaatagtggtcac 29677190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 93 - 190
Target Start/End: Complemental strand, 34364340 - 34364243
Alignment:
Q  93 tgaccactatttttctaaaatttatttgattaactaagtgaaaaaataatgatcacatacattttagttgtgtgaccatatttttcagcttctaaata 190  Q
    |||||| |||||||| | ||||| |||| ||||||||||||||||||  || |||| | ||||||||||||||||||| || ||||||||||||||||    
T  34364340 tgaccattatttttccagaatttttttggttaactaagtgaaaaaattgtggtcacgttcattttagttgtgtgaccacatgtttcagcttctaaata 34364243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 93 - 201
Target Start/End: Complemental strand, 38952016 - 38951906
Alignment:
Q  93 tgaccactatttttctaaaatttatttgattaactaagtgaaaaaataatgatcacatacattttagttgtgtgaccata--tttttcagcttctaaata 190  Q
    |||||||||||| || |||||||||||| ||||||||||  ||||||| || ||| |  ||||||||||| ||||| |||  |||||||| |||||||||    
T  38952016 tgaccactatttctccaaaatttatttggttaactaagtagaaaaatagtggtcagacgcattttagttgcgtgactatatttttttcagtttctaaata 38951917  T
Q  191 gtgatcacgca 201  Q
    ||| |||||||    
T  38951916 gtggtcacgca 38951906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 97 - 193
Target Start/End: Complemental strand, 42604323 - 42604227
Alignment:
Q  97 cactatttttctaaaatttatttgattaactaagtgaaaaaataatgatcacatacattttagttgtgtgaccatatttttcagcttctaaatagtg 193  Q
    ||||||||||  | |||||||||  ||||||||||| ||||||| || ||||   |||||||||||| |||||||| |||| |||||||||||||||    
T  42604323 cactattttttcagaatttatttcgttaactaagtggaaaaatagtggtcacgcgcattttagttgtatgaccatacttttaagcttctaaatagtg 42604227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 111 - 202
Target Start/End: Original strand, 29167828 - 29167918
Alignment:
Q  111 aatttatttgattaactaagtgaaaaaataatgatcacatacattttagttgtgtgaccatatttttcagcttctaaatagtgatcacgcaa 202  Q
    |||||||||| ||||||||||| ||||||| || |||    ||||||| ||| |||||||||||||| ||||||||||||||| ||||||||    
T  29167828 aatttatttggttaactaagtggaaaaatagtggtcatgcgcatttta-ttgcgtgaccatattttttagcttctaaatagtggtcacgcaa 29167918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 93 - 140
Target Start/End: Complemental strand, 2570017 - 2569970
Alignment:
Q  93 tgaccactatttttctaaaatttatttgattaactaagtgaaaaaata 140  Q
    ||||||||||||||||| |||||||||| ||||||||||| |||||||    
T  2570017 tgaccactatttttctagaatttatttggttaactaagtggaaaaata 2569970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 112 - 190
Target Start/End: Complemental strand, 9468199 - 9468120
Alignment:
Q  112 atttatttgattaactaagtga-aaaaataatgatcacatacattttagttgtgtgaccatatttttcagcttctaaata 190  Q
    ||||||||| |||||||||||  ||||||| |  ||||||||||||||||||||||| || ||||| |||||| ||||||    
T  9468199 atttatttggttaactaagtggcaaaaatagtagtcacatacattttagttgtgtgatcacattttacagcttttaaata 9468120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 111 - 202
Target Start/End: Complemental strand, 25238567 - 25238477
Alignment:
Q  111 aatttatttgattaactaagtgaaaaaataatgatcacatacattttagttgtgtgaccatatttttcagcttctaaatagtgatcacgcaa 202  Q
    |||||||||| ||||||||||| ||||||| || | ||  |||||||| ||  ||||||| |||||| ||||||||||||||| ||||||||    
T  25238567 aatttatttggttaactaagtggaaaaatagtggttacgcacatttta-ttacgtgaccacattttttagcttctaaatagtggtcacgcaa 25238477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 113 - 202
Target Start/End: Original strand, 517433 - 517522
Alignment:
Q  113 tttatttgattaactaagtgaaaaaataatgatcacatacattttagttgtgtgaccatatttttcagcttctaaatagtgatcacgcaa 202  Q
    |||||||| |||||||||| |||||||| |  |||  | ||||||||||| |||| ||||||||| | ||||||||||||| | ||||||    
T  517433 tttatttggttaactaagttaaaaaatagtagtcatgttcattttagttgcgtgatcatattttttaacttctaaatagtggttacgcaa 517522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 10 - 77
Target Start/End: Original strand, 13350902 - 13350972
Alignment:
Q  10 cttaatgtgtacaccattttgtatcactctacaaaat---agttaaccaaatatatagtctgtgtaatcac 77  Q
    ||||||||||||||| ||||||| ||||||  |||||   |||||||||||||||| || ||||| |||||    
T  13350902 cttaatgtgtacacccttttgtaccactctcgaaaatttcagttaaccaaatatatggtatgtgtgatcac 13350972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 58; Significance: 4e-24; HSPs: 13)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 9 - 202
Target Start/End: Complemental strand, 35922928 - 35922732
Alignment:
Q  9 tcttaatgtgtacaccattttgtatcactctacaaaat---agttaaccaaatatatagtctgtgtaatcacannnnnnnagttacatgaccactatttt 105  Q
    ||||||||||||||||  ||||||||||| |  |||||   |||||||||||| ||| |||||||  | || |       |||| |||||||||||||||    
T  35922928 tcttaatgtgtacaccgctttgtatcactttgaaaaatttaagttaaccaaatttatggtctgtgggaccatattttttaagttgcatgaccactatttt 35922829  T
Q  106 tctaaaatttatttgattaactaagtgaaaaaataatgatcacatacattttagttgtgtgaccatatttttcagcttctaaatagtgatcacgcaa 202  Q
    |  | |||||||||| |||||||| || ||||||| || ||| |  ||||||||||| ||||||| |||||||||||||||||||||| ||||||||    
T  35922828 ttcagaatttatttggttaactaaatggaaaaatagtggtcatacgcattttagttgcgtgaccacatttttcagcttctaaatagtggtcacgcaa 35922732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 54 - 187
Target Start/End: Complemental strand, 42034904 - 42034771
Alignment:
Q  54 caaatatatagtctgtgtaatcacannnnnnnagttacatgaccactatttttctaaaatttatttgattaactaagtgaaaaaataatgatcacataca 153  Q
    ||||||||| || ||||||||||||       |||| | ||||||||| ||||| |||||||||||| ||||||||||| ||||||| || |||| | ||    
T  42034904 caaatatatggtatgtgtaatcacatttttttagttgcgtgaccactagttttccaaaatttatttggttaactaagtggaaaaatagtggtcacgtgca 42034805  T
Q  154 ttttagttgtgtgaccatatttttcagcttctaa 187  Q
    ||||||||| ||||||| ||||||||||||||||    
T  42034804 ttttagttgcgtgaccacatttttcagcttctaa 42034771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 49 - 201
Target Start/End: Original strand, 33958936 - 33959088
Alignment:
Q  49 ttaaccaaatatatagtctgtgtaatcacannnnnnnagttacatgaccactatttttctaaaatttatttgattaactaagtgaaaaaataatgatcac 148  Q
    |||||||||||||| |||| ||||||||||       || | ||||||||| ||||||| | |||||||||| | ||||||||| ||||||| || | ||    
T  33958936 ttaaccaaatatatggtctatgtaatcacatttttttagctgcatgaccacaatttttccagaatttatttggtcaactaagtggaaaaatagtggttac 33959035  T
Q  149 atacattttagttgtgtgaccatatttttcagcttctaaatagtgatcacgca 201  Q
        |||||||||| ||||||||||||||||| |||||||||||| |||||||    
T  33959036 tcggattttagttgcgtgaccatatttttcagtttctaaatagtggtcacgca 33959088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 93 - 191
Target Start/End: Complemental strand, 13312707 - 13312609
Alignment:
Q  93 tgaccactatttttctaaaatttatttgattaactaagtgaaaaaataatgatcacatacattttagttgtgtgaccatatttttcagcttctaaatag 191  Q
    ||||||||||||||| | |||||||||| ||||||||||| ||||||| |   |||   ||||||||||| ||||||| ||||||||||||||||||||    
T  13312707 tgaccactatttttccataatttatttggttaactaagtggaaaaatagttgccacgcgcattttagttgcgtgaccacatttttcagcttctaaatag 13312609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 98 - 202
Target Start/End: Complemental strand, 31189681 - 31189578
Alignment:
Q  98 actatttttctaaaatttatttgattaactaagtgaaaaaataatgatcacatacattttagttgtgtgaccatatttttcagcttctaaatagtgatca 197  Q
    ||||| |||| | |||||||||||||||| ||||| |||| || || ||||| |||||||||||| |||| || ||||||||||||||||||||| ||||    
T  31189681 actatgtttccagaatttatttgattaaccaagtggaaaa-tagtggtcacaaacattttagttgcgtgatcacatttttcagcttctaaatagtaatca 31189583  T
Q  198 cgcaa 202  Q
     ||||    
T  31189582 tgcaa 31189578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 93 - 202
Target Start/End: Complemental strand, 22169566 - 22169457
Alignment:
Q  93 tgaccactatttttctaaaatttatttgattaactaagtgaaaaaataatgatcacatacattttagttgtgtgaccatatttttcagcttctaaatagt 192  Q
    |||||| |||||||  |||||||||||| ||||||| ||  ||||||| || ||||   ||||||||||| ||||||| |||||||| ||| ||||||||    
T  22169566 tgaccattattttttcaaaatttatttggttaactacgttgaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcaacttataaatagt 22169467  T
Q  193 gatcacgcaa 202  Q
    | ||||||||    
T  22169466 ggtcacgcaa 22169457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 154 - 202
Target Start/End: Original strand, 36169394 - 36169442
Alignment:
Q  154 ttttagttgtgtgaccatatttttcagcttctaaatagtgatcacgcaa 202  Q
    ||||||||| |||||||||||||||||||||||||||||| ||||||||    
T  36169394 ttttagttgcgtgaccatatttttcagcttctaaatagtggtcacgcaa 36169442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 97 - 170
Target Start/End: Original strand, 19621477 - 19621550
Alignment:
Q  97 cactatttttctaaaatttatttgattaactaagtgaaaaaataatgatcacatacattttagttgtgtgacca 170  Q
    ||||||||||| | |||||||||| ||||||||||| ||||||| || ||||  |||||||||||| |||||||    
T  19621477 cactatttttccagaatttatttggttaactaagtggaaaaatagtggtcacgcacattttagttgcgtgacca 19621550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 93 - 202
Target Start/End: Original strand, 38521968 - 38522076
Alignment:
Q  93 tgaccactatttttctaaaatttatttgattaactaagtgaaaaaataatgatcacatacattttagttgtgtgaccatatttttcagcttctaaatagt 192  Q
    |||||| || ||||||| |||||||||  ||||||||||| ||||||| || ||||   ||||||| | | ||||||| |||||||||||||||||||||    
T  38521968 tgaccattagttttctagaatttatttagttaactaagtgtaaaaatagtggtcacgcgcatttta-tcgcgtgaccacatttttcagcttctaaatagt 38522066  T
Q  193 gatcacgcaa 202  Q
    | ||| ||||    
T  38522067 ggtcatgcaa 38522076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 93 - 198
Target Start/End: Original strand, 43461701 - 43461806
Alignment:
Q  93 tgaccactatttttctaaaatttatttgattaactaagtgaaaaaataatgatcacatacattttagttgtgtgaccatatttttcagcttctaaatagt 192  Q
    |||| |||||||||  | |||||||||| || |||||||| ||||||| || | || |  |||||||||| |||||| ||||||||| ||||||||||||    
T  43461701 tgacaactattttttcagaatttatttggtttactaagtggaaaaatagtggttacgtgaattttagttgcgtgaccgtatttttcaacttctaaatagt 43461800  T
Q  193 gatcac 198  Q
    | ||||    
T  43461801 ggtcac 43461806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 112 - 189
Target Start/End: Complemental strand, 7156182 - 7156105
Alignment:
Q  112 atttatttgattaactaagtgaaaaaataatgatcacatacattttagttgtgtgaccatatttttcagcttctaaat 189  Q
    ||||||||| |||| |||||| |||||||||| ||||  | |||||||||| | || || ||||||||||||||||||    
T  7156182 atttatttggttaattaagtggaaaaataatggtcacgcatattttagttgcgcgatcacatttttcagcttctaaat 7156105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 115 - 178
Target Start/End: Original strand, 43262708 - 43262771
Alignment:
Q  115 tatttgattaactaagtgaaaaaataatgatcacatacattttagttgtgtgaccatatttttc 178  Q
    |||||| ||||||||||| ||||||| || ||||   ||||||||||||||||||| |||||||    
T  43262708 tatttggttaactaagtggaaaaatagtggtcacgcgcattttagttgtgtgaccacatttttc 43262771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 112 - 189
Target Start/End: Original strand, 30704398 - 30704476
Alignment:
Q  112 atttatttgattaactaagtgaaaaaataatgatcacatacattttagttgtgtgaccata-tttttcagcttctaaat 189  Q
    ||||||||| ||||||||||| ||||||| || ||||   ||||||||||||| ||||| | ||||||||||| |||||    
T  30704398 atttatttggttaactaagtggaaaaatagtggtcacgcgcattttagttgtgcgaccacattttttcagcttttaaat 30704476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 57; Significance: 2e-23; HSPs: 14)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 93 - 201
Target Start/End: Original strand, 33179759 - 33179867
Alignment:
Q  93 tgaccactatttttctaaaatttatttgattaactaagtgaaaaaataatgatcacatacattttagttgtgtgaccatatttttcagcttctaaatagt 192  Q
    ||||||||| |||| || |||||||||||||||||||||| ||||||| || |||||  ||||||||||||||| ||| ||||||||  |||||||||||    
T  33179759 tgaccactacttttttagaatttatttgattaactaagtggaaaaatagtggtcacacgcattttagttgtgtggccacatttttcactttctaaatagt 33179858  T
Q  193 gatcacgca 201  Q
    | |||||||    
T  33179859 ggtcacgca 33179867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 93 - 202
Target Start/End: Original strand, 33249616 - 33249725
Alignment:
Q  93 tgaccactatttttctaaaatttatttgattaactaagtgaaaaaataatgatcacatacattttagttgtgtgaccatatttttcagcttctaaatagt 192  Q
    ||||||||| ||||  |||||||||||||||||||| ||| ||||||| || |||||  |||||||  || ||||||| |||||||| ||||||||||||    
T  33249616 tgaccactactttttcaaaatttatttgattaactaggtggaaaaatagtggtcacacgcattttatgtgcgtgaccacatttttcaccttctaaatagt 33249715  T
Q  193 gatcacgcaa 202  Q
    | ||||||||    
T  33249716 ggtcacgcaa 33249725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 1966741 - 1966941
Alignment:
Q  1 tagacacctcttaatgtgtacaccattttgtatcactctacaaaat--agttaaccaaatatatagtctgtgtaatcacannnnnnnagttacatgacca 98  Q
    |||||||| |||| ||| |||||| ||||||| ||||||  ||| |  |||||||||||||||| |||||||| | ||||       |||| | ||||||    
T  1966741 tagacacc-cttactgtatacacccttttgtaccactctgaaaatttcagttaaccaaatatatggtctgtgtgaccacatttttt-agttgcgtgacca 1966838  T
Q  99 ctatttttctaaaatttatttgattaactaagtgaaaaaataatgatcacatacattttagttgtgtgaccatatttttcagcttctaaatagtgatcac 198  Q
    ||| ||||| | |||||||||| |||| |||||| ||||||| || ||||   ||||| ||||| ||||||| |||||||||||||||||||||| ||||    
T  1966839 ctagttttccagaatttatttggttaattaagtggaaaaatagtggtcacgcgcattt-agttgcgtgaccacatttttcagcttctaaatagtggtcac 1966937  T
Q  199 gcaa 202  Q
    ||||    
T  1966938 gcaa 1966941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 93 - 202
Target Start/End: Complemental strand, 16583705 - 16583596
Alignment:
Q  93 tgaccactatttttctaaaatttatttgattaactaagtgaaaaaataatgatcacatacattttagttgtgtgaccatatttttcagcttctaaatagt 192  Q
    |||| |||||||| | | |||||||||| |||| |||||| ||||||| || ||||   |||||||||||  ||| ||||||||||||||||||||||||    
T  16583705 tgactactattttaccataatttatttggttaattaagtggaaaaatagtggtcacgcgcattttagttgcatgatcatatttttcagcttctaaatagt 16583606  T
Q  193 gatcacgcaa 202  Q
    | ||||||||    
T  16583605 ggtcacgcaa 16583596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 91 - 179
Target Start/End: Original strand, 17633339 - 17633427
Alignment:
Q  91 catgaccactatttttctaaaatttatttgattaactaagtgaaaaaataatgatcacatacattttagttgtgtgaccatatttttca 179  Q
    ||||||||| |||| || |||||||||||| |||||||||| |||||||| || ||||   ||||||||||| ||||||||||||||||    
T  17633339 catgaccacaatttgtccaaaatttatttggttaactaagttaaaaaatagtggtcacgcgcattttagttgcgtgaccatatttttca 17633427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 98 - 193
Target Start/End: Original strand, 35544425 - 35544519
Alignment:
Q  98 actatttttctaaaatttatttgattaactaagtgaaaaaataatgatcacatacattttagttgtgtgaccatatttttcagcttctaaatagtg 193  Q
    ||||||| || |||||||||||  |||| |||||| ||||||| ||||||||  ||||| ||||| ||||||| ||||||||||||||||||||||    
T  35544425 actatttatccaaaatttatttagttaattaagtggaaaaatagtgatcacacgcattt-agttgcgtgaccacatttttcagcttctaaatagtg 35544519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 112 - 189
Target Start/End: Complemental strand, 24669274 - 24669197
Alignment:
Q  112 atttatttgattaactaagtgaaaaaataatgatcacatacattttagttgtgtgaccatatttttcagcttctaaat 189  Q
    ||||||||| ||||||||||||||||||| || |||||   |||||||||| |||||||||||||| || ||||||||    
T  24669274 atttatttggttaactaagtgaaaaaatagtggtcacacgaattttagttgcgtgaccatatttttgagtttctaaat 24669197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 93 - 202
Target Start/End: Complemental strand, 9809183 - 9809074
Alignment:
Q  93 tgaccactatttttctaaaatttatttgattaactaagtgaaaaaataatgatcacatacattttagttgtgtgaccatatttttcagcttctaaatagt 192  Q
    |||||| | |||||| | || ||||||| |||||||| || ||||||| || ||||   ||||| ||||| ||||| | |||||||||||||||||||||    
T  9809183 tgaccattttttttccataaattatttggttaactaaatggaaaaatagtggtcacgcgcatttgagttgcgtgactacatttttcagcttctaaatagt 9809084  T
Q  193 gatcacgcaa 202  Q
    | ||||||||    
T  9809083 ggtcacgcaa 9809074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 98 - 202
Target Start/End: Original strand, 8740796 - 8740899
Alignment:
Q  98 actatttttctaaaatttatttgattaactaagtgaaaaaataatgatcacatacattttagttgtgtgaccatatttttcagcttctaaatagtgatca 197  Q
    |||| ||||| | |||||||||  ||||||||||  ||||||| || ||||   |||||||||   ||||||| ||||||||||||||||||||||||||    
T  8740796 actacttttccataatttatttagttaactaagtagaaaaatagtggtcacgcgcattttagtac-gtgaccacatttttcagcttctaaatagtgatca 8740894  T
Q  198 cgcaa 202  Q
    |||||    
T  8740895 cgcaa 8740899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 93 - 193
Target Start/End: Complemental strand, 14351171 - 14351071
Alignment:
Q  93 tgaccactatttttctaaaatttatttgattaactaagtgaaaaaataatgatcacatacattttagttgtgtgaccatatttttcagcttctaaatagt 192  Q
    |||||||||||||   |||||||||||| ||||||||||| ||||||| || |||   |||||||||||| |||| || || ||| |||||| |||||||    
T  14351171 tgaccactattttgacaaaatttatttggttaactaagtggaaaaatagtggtcatggacattttagttgcgtgatcacatcttttagcttcaaaatagt 14351072  T
Q  193 g 193  Q
    |    
T  14351071 g 14351071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 111 - 202
Target Start/End: Original strand, 55666844 - 55666934
Alignment:
Q  111 aatttatttgattaactaagtgaaaaaataatgatcacatacattttagttgtgtgaccatatttttcagcttctaaatagtgatcacgcaa 202  Q
    |||||||||| ||||||||||| ||||||| || ||||  |||||||||||  |||||||  ||||||||||| |||||| || ||||||||    
T  55666844 aatttatttgcttaactaagtggaaaaatagtggtcacgaacattttagtt-cgtgaccacgtttttcagcttataaataatggtcacgcaa 55666934  T

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Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 114 - 202
Target Start/End: Complemental strand, 9810848 - 9810760
Alignment:
Q  114 ttatttgattaactaagtgaaaaaataatgatcacatacattttagttgtgtgaccatatttttcagcttctaaatagtgatcacgcaa 202  Q
    ||||||| |||||||| || |||||||  | ||||  |||||| ||||| ||||| | |||||| ||||||||||||||| ||||||||    
T  9810848 ttatttggttaactaaatggaaaaatagaggtcacgcacatttgagttgcgtgactacattttttagcttctaaatagtggtcacgcaa 9810760  T

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Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 155 - 202
Target Start/End: Complemental strand, 20874880 - 20874833
Alignment:
Q  155 tttagttgtgtgaccatatttttcagcttctaaatagtgatcacgcaa 202  Q
    |||||||| || |||| ||||||||||||||||| |||||||||||||    
T  20874880 tttagttgcgttaccacatttttcagcttctaaaaagtgatcacgcaa 20874833  T

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Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 152 - 190
Target Start/End: Complemental strand, 19596832 - 19596794
Alignment:
Q  152 cattttagttgtgtgaccatatttttcagcttctaaata 190  Q
    ||||||||||| ||||||| |||||||||||||||||||    
T  19596832 cattttagttgcgtgaccacatttttcagcttctaaata 19596794  T

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Target: scaffold1126 (Bit Score: 47; Significance: 2e-17; HSPs: 1)
Name: scaffold1126
Description:

Target: scaffold1126; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 47 - 202
Target Start/End: Original strand, 163 - 318
Alignment:
Q  47 agttaaccaaatatatagtctgtgtaatcacannnnnnnagttacatgaccactatttttctaaaatttatttgattaactaagtgaaaaaataatgatc 146  Q
    |||||||||||||||| | |||||| ||||||       |||| | ||||||||| ||||  |||| |||||||  ||| |||||| ||||||| || ||    
T  163 agttaaccaaatatatggactgtgtgatcacattgttttagttgcgtgaccactaatttttcaaaaattatttggataagtaagtggaaaaatagtggtc 262  T
Q  147 acatacattttagttgtgtgaccatatttttcagcttctaaatagtgatcacgcaa 202  Q
    |    ||||||||||| ||||||| |||||||||||||||||||||| ||||||||    
T  263 atgcgcattttagttgcgtgaccacatttttcagcttctaaatagtggtcacgcaa 318  T

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Target: scaffold0024 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 112 - 189
Target Start/End: Complemental strand, 112235 - 112158
Alignment:
Q  112 atttatttgattaactaagtgaaaaaataatgatcacatacattttagttgtgtgaccatatttttcagcttctaaat 189  Q
    ||||||||  ||||||||||| ||||||| || |||| | ||||||| ||| |||||||  |||||||||||||||||    
T  112235 atttatttagttaactaagtggaaaaatagtggtcacgtgcattttaattgcgtgaccacgtttttcagcttctaaat 112158  T

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Target: scaffold0251 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 111 - 202
Target Start/End: Original strand, 10633 - 10724
Alignment:
Q  111 aatttatttgattaactaagtgaaaaaataatgatcacatacattttagttgtgtgaccatatttttcagcttctaaatagtgatcacgcaa 202  Q
    |||||||||| ||||||||||| |||||||||| ||||    |||||||||| ||||||| |||||| |  || ||||||||| ||| ||||    
T  10633 aatttatttggttaactaagtggaaaaataatggtcacgggtattttagttgcgtgaccacattttttattttttaaatagtggtcatgcaa 10724  T

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