View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12651_low_7 (Length: 456)

Name: NF12651_low_7
Description: NF12651
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12651_low_7
NF12651_low_7
[»] chr8 (10 HSPs)
chr8 (201-456)||(12199732-12199987)
chr8 (201-456)||(12444160-12444415)
chr8 (220-456)||(12194732-12194981)
chr8 (220-456)||(12439160-12439409)
chr8 (115-203)||(12199454-12199542)
chr8 (115-203)||(12443882-12443970)
chr8 (24-104)||(12199335-12199417)
chr8 (24-104)||(12443763-12443845)
chr8 (366-456)||(15348452-15348542)
chr8 (381-409)||(41311566-41311594)
[»] chr4 (31 HSPs)
chr4 (352-456)||(7238118-7238222)
chr4 (352-456)||(7770980-7771084)
chr4 (348-456)||(7904604-7904712)
chr4 (357-456)||(45372455-45372554)
chr4 (380-456)||(7789693-7789769)
chr4 (378-456)||(48170987-48171065)
chr4 (378-456)||(48735713-48735791)
chr4 (386-456)||(49044627-49044697)
chr4 (390-456)||(7813094-7813160)
chr4 (390-456)||(7822583-7822649)
chr4 (366-456)||(48862831-48862921)
chr4 (355-456)||(7774227-7774328)
chr4 (383-456)||(7907932-7908005)
chr4 (392-456)||(49048997-49049061)
chr4 (390-456)||(7800251-7800317)
chr4 (355-456)||(7877299-7877400)
chr4 (367-456)||(48156825-48156914)
chr4 (360-456)||(45366619-45366715)
chr4 (366-453)||(48902540-48902627)
chr4 (378-456)||(48870144-48870222)
chr4 (378-456)||(48885830-48885908)
chr4 (390-456)||(49041536-49041602)
chr4 (392-456)||(48148083-48148147)
chr4 (360-456)||(48898306-48898402)
chr4 (374-456)||(7765219-7765301)
chr4 (390-456)||(48891023-48891089)
chr4 (368-456)||(50668635-50668723)
chr4 (390-456)||(7786057-7786123)
chr4 (398-456)||(33134224-33134282)
chr4 (357-450)||(45385191-45385284)
chr4 (389-453)||(37827395-37827459)
[»] chr3 (4 HSPs)
chr3 (366-456)||(11006360-11006450)
chr3 (366-456)||(11024935-11025025)
chr3 (366-456)||(11015923-11016013)
chr3 (390-456)||(47452305-47452371)
[»] chr7 (2 HSPs)
chr7 (121-201)||(35535092-35535172)
chr7 (367-456)||(48883373-48883465)
[»] chr1 (5 HSPs)
chr1 (381-456)||(24322067-24322142)
chr1 (392-456)||(24340030-24340094)
chr1 (417-456)||(24366796-24366835)
chr1 (366-453)||(24415427-24415514)
chr1 (398-456)||(24309799-24309857)
[»] chr5 (6 HSPs)
chr5 (371-456)||(29712867-29712952)
chr5 (367-450)||(29687642-29687725)
chr5 (360-453)||(29695736-29695829)
chr5 (390-456)||(1812039-1812105)
chr5 (398-456)||(42562729-42562787)
chr5 (367-456)||(178610-178699)
[»] chr6 (3 HSPs)
chr6 (395-455)||(14193144-14193204)
chr6 (390-456)||(21015390-21015456)
chr6 (381-456)||(21980042-21980117)
[»] scaffold0508 (1 HSPs)
scaffold0508 (404-456)||(11890-11942)


Alignment Details
Target: chr8 (Bit Score: 244; Significance: 1e-135; HSPs: 10)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 201 - 456
Target Start/End: Original strand, 12199732 - 12199987
Alignment:
Q  201 aatttatttaccctgggcttcgtcctctcaaaaacaatactgatttattcacctatatatttcatcacctgaaatcccctagggttacgcgcaacagagt 300  Q
    ||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12199732 aatttattttccctgggcctcgtcctctcaaaaacaatactgatttattcacctatatatttcatcacctgaaatcccctagggttacgcgcaacagagt 12199831  T
Q  301 caagaacatggcagagaagaaacacaatcgcatggtgaagatgaaagagacgttgtatattccttatgaattaatcattcaaatcctgctgaggttgccg 400  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12199832 caagaacatggcagagaagaaatacaatcgcatggtgaagatgaaagagacgttgtatattccttatgaattaatcattcaaatcctgctgaggttgccg 12199931  T
Q  401 gtgaagtctcttttatgtttcaaatgtgtttgtaagtcatggttttctcttatctc 456  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12199932 gtgaagtctcttttatgtttcaaatgtgtttgtaagtcatggttttctcttatctc 12199987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 201 - 456
Target Start/End: Original strand, 12444160 - 12444415
Alignment:
Q  201 aatttatttaccctgggcttcgtcctctcaaaaacaatactgatttattcacctatatatttcatcacctgaaatcccctagggttacgcgcaacagagt 300  Q
    ||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12444160 aatttattttccctgggcctcgtcctctcaaaaacaatactgatttattcacctatatatttcatcacctgaaatcccctagggttacgcgcaacagagt 12444259  T
Q  301 caagaacatggcagagaagaaacacaatcgcatggtgaagatgaaagagacgttgtatattccttatgaattaatcattcaaatcctgctgaggttgccg 400  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12444260 caagaacatggcagagaagaaatacaatcgcatggtgaagatgaaagagacgttgtatattccttatgaattaatcattcaaatcctgctgaggttgccg 12444359  T
Q  401 gtgaagtctcttttatgtttcaaatgtgtttgtaagtcatggttttctcttatctc 456  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12444360 gtgaagtctcttttatgtttcaaatgtgtttgtaagtcatggttttctcttatctc 12444415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 220 - 456
Target Start/End: Original strand, 12194732 - 12194981
Alignment:
Q  220 tcgtcctctcaaaaacaatactgatttattcacctatatatttcatcacctgaaatcccctagggttacgcgcaacagagtcaag-------------aa 306  Q
    ||||||||| |||||||||||| ||||||||||||||  |||||||||| || |||||||||||||||||||||||| ||| |||             ||    
T  12194732 tcgtcctctaaaaaacaatactaatttattcacctatgcatttcatcacttggaatcccctagggttacgcgcaacacagttaaggttcatcacctggaa 12194831  T
Q  307 catggcagagaagaaacacaatcgcatggtgaagatgaaagagacgttgtatattccttatgaattaatcattcaaatcctgctgaggttgccggtgaag 406  Q
    ||   ||||||||||  ||| |||||||| |||||||||||||||||| ||| |||||| ||||||||||||||||||||||||||||||||||||||||    
T  12194832 caccacagagaagaattacactcgcatggcgaagatgaaagagacgttatatcttccttctgaattaatcattcaaatcctgctgaggttgccggtgaag 12194931  T
Q  407 tctcttttatgtttcaaatgtgtttgtaagtcatggttttctcttatctc 456  Q
    ||||||||||||||||||||  |||||||||||||||| |||||||||||    
T  12194932 tctcttttatgtttcaaatgcatttgtaagtcatggttatctcttatctc 12194981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 220 - 456
Target Start/End: Original strand, 12439160 - 12439409
Alignment:
Q  220 tcgtcctctcaaaaacaatactgatttattcacctatatatttcatcacctgaaatcccctagggttacgcgcaacagagtcaag-------------aa 306  Q
    ||||||||| |||||||||||| ||||||||||||||  |||||||||| || |||||||||||||||||||||||| ||| |||             ||    
T  12439160 tcgtcctctaaaaaacaatactaatttattcacctatgcatttcatcacttggaatcccctagggttacgcgcaacacagttaaggttcatcacctggaa 12439259  T
Q  307 catggcagagaagaaacacaatcgcatggtgaagatgaaagagacgttgtatattccttatgaattaatcattcaaatcctgctgaggttgccggtgaag 406  Q
    ||   ||||||||||  ||| |||||||| |||||||||||||||||| ||| |||||| ||||||||||||||||||||||||||||||||||||||||    
T  12439260 caccacagagaagaattacactcgcatggcgaagatgaaagagacgttatatcttccttctgaattaatcattcaaatcctgctgaggttgccggtgaag 12439359  T
Q  407 tctcttttatgtttcaaatgtgtttgtaagtcatggttttctcttatctc 456  Q
    ||||||||||||||||||||  |||||||||||||||| |||||||||||    
T  12439360 tctcttttatgtttcaaatgcatttgtaagtcatggttatctcttatctc 12439409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 115 - 203
Target Start/End: Original strand, 12199454 - 12199542
Alignment:
Q  115 ctattttttcactattactaacttgaccaaaccctttcatcaaagtattatatttcacaatattaggagccacgttagccaagttcaat 203  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  12199454 ctattttttcactattactaacttgaccaaaccctttcatcaaagtattatatttcacaatattaggagccacgttagccaacttcaat 12199542  T

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Target: chr8; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 115 - 203
Target Start/End: Original strand, 12443882 - 12443970
Alignment:
Q  115 ctattttttcactattactaacttgaccaaaccctttcatcaaagtattatatttcacaatattaggagccacgttagccaagttcaat 203  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  12443882 ctattttttcactattactaacttgaccaaaccctttcatcaaagtattatatttcacaatattaggagccacgttagccaacttcaat 12443970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 24 - 104
Target Start/End: Original strand, 12199335 - 12199417
Alignment:
Q  24 ttctttataatgaagcatgtaattagcagcttcaaaaatc--atacatactacacataagtaaacaaaaagcaacctagaaag 104  Q
    |||||||||||||||||||||||| |||||||||||||||  ||||||||||||||||||||||||||||| |||||||||||    
T  12199335 ttctttataatgaagcatgtaattggcagcttcaaaaatcatatacatactacacataagtaaacaaaaagtaacctagaaag 12199417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 24 - 104
Target Start/End: Original strand, 12443763 - 12443845
Alignment:
Q  24 ttctttataatgaagcatgtaattagcagcttcaaaaatc--atacatactacacataagtaaacaaaaagcaacctagaaag 104  Q
    |||||||||||||||||||||||| |||||||||||||||  ||||||||||||||||||||||||||||| |||||||||||    
T  12443763 ttctttataatgaagcatgtaattggcagcttcaaaaatcatatacatactacacataagtaaacaaaaagtaacctagaaag 12443845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 366 - 456
Target Start/End: Original strand, 15348452 - 15348542
Alignment:
Q  366 atgaattaatcattcaaatcctgctgaggttgccggtgaagtctcttttatgtttcaaatgtgtttgtaagtcatggttttctcttatctc 456  Q
    ||||||||||  ||||||| ||   |||||| ||||||||||||||| || |||||||||| ||||||||||| |||||||||||||||||    
T  15348452 atgaattaatagttcaaattctagagaggttaccggtgaagtctcttatacgtttcaaatgcgtttgtaagtcttggttttctcttatctc 15348542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 381 - 409
Target Start/End: Complemental strand, 41311594 - 41311566
Alignment:
Q  381 aaatcctgctgaggttgccggtgaagtct 409  Q
    |||||||||||||||||||||||||||||    
T  41311594 aaatcctgctgaggttgccggtgaagtct 41311566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 61; Significance: 5e-26; HSPs: 31)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 352 - 456
Target Start/End: Complemental strand, 7238222 - 7238118
Alignment:
Q  352 gttgtatattccttatgaattaatcattcaaatcctgctgaggttgccggtgaagtctcttttatgtttcaaatgtgtttgtaagtcatggttttctctt 451  Q
    ||||||| | ||| ||||| ||||||| ||||| ||| |||||||||| |||||||||||| | ||||||||||||||||||||||| ||||||||||||    
T  7238222 gttgtatctgcctcatgaactaatcatccaaattctgatgaggttgccagtgaagtctcttatctgtttcaaatgtgtttgtaagtcttggttttctctt 7238123  T
Q  452 atctc 456  Q
    |||||    
T  7238122 atctc 7238118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 352 - 456
Target Start/End: Original strand, 7770980 - 7771084
Alignment:
Q  352 gttgtatattccttatgaattaatcattcaaatcctgctgaggttgccggtgaagtctcttttatgtttcaaatgtgtttgtaagtcatggttttctctt 451  Q
    ||||||| | ||| ||||| |||| || ||||| ||| ||||||||||||||||||||||| ||||||||||||| ||||||||||| ||||||||||||    
T  7770980 gttgtatctgcctcatgaactaataatccaaattctgatgaggttgccggtgaagtctcttatatgtttcaaatgcgtttgtaagtcttggttttctctt 7771079  T
Q  452 atctc 456  Q
    |||||    
T  7771080 atctc 7771084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 348 - 456
Target Start/End: Original strand, 7904604 - 7904712
Alignment:
Q  348 agacgttgtatattccttatgaattaatcattcaaatcctgctgaggttgccggtgaagtctcttttatgtttcaaatgtgtttgtaagtcatggttttc 447  Q
    ||||||||||| |||||  |||||| || ||||||||| || || ||||||| |||||||||||| || ||||||||||||||||||||| |||||||||    
T  7904604 agacgttgtatcttcctcgtgaattgattattcaaatcttgatgtggttgcctgtgaagtctcttatacgtttcaaatgtgtttgtaagttatggttttc 7904703  T
Q  448 tcttatctc 456  Q
    |||||||||    
T  7904704 tcttatctc 7904712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 357 - 456
Target Start/End: Complemental strand, 45372554 - 45372455
Alignment:
Q  357 atattccttatgaattaatcattcaaatcctgctgaggttgccggtgaagtctcttttatgtttcaaatgtgtttgtaagtcatggttttctcttatctc 456  Q
    |||| ||| ||||||| || |||||||| || || ||||||||||||||||||||| || |||||||||||||||||||||| ||||||||| |||||||    
T  45372554 atatgcctcatgaattgatgattcaaattctactaaggttgccggtgaagtctcttatacgtttcaaatgtgtttgtaagtcttggttttctattatctc 45372455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 380 - 456
Target Start/End: Original strand, 7789693 - 7789769
Alignment:
Q  380 caaatcctgctgaggttgccggtgaagtctcttttatgtttcaaatgtgtttgtaagtcatggttttctcttatctc 456  Q
    ||||| ||| ||||||||||||||||||||||| ||||||||||||| ||||||||||| ||||||||| |||||||    
T  7789693 caaattctgatgaggttgccggtgaagtctcttatatgtttcaaatgcgtttgtaagtcttggttttcttttatctc 7789769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 378 - 456
Target Start/End: Complemental strand, 48171065 - 48170987
Alignment:
Q  378 ttcaaatcctgctgaggttgccggtgaagtctcttttatgtttcaaatgtgtttgtaagtcatggttttctcttatctc 456  Q
    ||||||| |||||||||||  |||||||||||||| || |||||||||||||||||||||| |||||| ||||||||||    
T  48171065 ttcaaattctgctgaggttatcggtgaagtctcttctacgtttcaaatgtgtttgtaagtcttggtttgctcttatctc 48170987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 378 - 456
Target Start/End: Complemental strand, 48735791 - 48735713
Alignment:
Q  378 ttcaaatcctgctgaggttgccggtgaagtctcttttatgtttcaaatgtgtttgtaagtcatggttttctcttatctc 456  Q
    ||||||| || |||||||| ||||||||||||||| |  |||||||||||||||||||||| |||||||||||||||||    
T  48735791 ttcaaattcttctgaggttaccggtgaagtctcttattcgtttcaaatgtgtttgtaagtcttggttttctcttatctc 48735713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 386 - 456
Target Start/End: Complemental strand, 49044697 - 49044627
Alignment:
Q  386 ctgctgaggttgccggtgaagtctcttttatgtttcaaatgtgtttgtaagtcatggttttctcttatctc 456  Q
    |||||||||||||| |||| |||||||||| ||||||| ||||||||||||| ||||||||||||||||||    
T  49044697 ctgctgaggttgccagtgatgtctcttttacgtttcaagtgtgtttgtaagttatggttttctcttatctc 49044627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 390 - 456
Target Start/End: Original strand, 7813094 - 7813160
Alignment:
Q  390 tgaggttgccggtgaagtctcttttatgtttcaaatgtgtttgtaagtcatggttttctcttatctc 456  Q
    |||||||||||||||||| |||| || ||||||| ||||||||||| ||||||||||||||||||||    
T  7813094 tgaggttgccggtgaagtatcttatacgtttcaagtgtgtttgtaaatcatggttttctcttatctc 7813160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 390 - 456
Target Start/End: Original strand, 7822583 - 7822649
Alignment:
Q  390 tgaggttgccggtgaagtctcttttatgtttcaaatgtgtttgtaagtcatggttttctcttatctc 456  Q
    |||||||||||||||||| |||| || ||||||| ||||||||||| ||||||||||||||||||||    
T  7822583 tgaggttgccggtgaagtatcttatacgtttcaagtgtgtttgtaaatcatggttttctcttatctc 7822649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 366 - 456
Target Start/End: Original strand, 48862831 - 48862921
Alignment:
Q  366 atgaattaatcattcaaatcctgctgaggttgccggtgaagtctcttttatgtttcaaatgtgtttgtaagtcatggttttctcttatctc 456  Q
    ||||||| ||||| | ||||||||| ||||| ||||||||||||||| |  |||||||||| ||||| ||||| |||||||||||||||||    
T  48862831 atgaattgatcatcctaatcctgctaaggttaccggtgaagtctcttattcgtttcaaatgcgtttgcaagtcttggttttctcttatctc 48862921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 355 - 456
Target Start/End: Complemental strand, 7774328 - 7774227
Alignment:
Q  355 gtatattccttatgaattaatcattcaaatcctgctgaggttgccggtgaagtctcttttatgtttcaaatgtgtttgtaagtcatggttttctcttatc 454  Q
    |||| ||||| ||||||| || ||||||||| || || || ||||||||||||||||| |   |||||||||||||||||||  ||||||||||||||||    
T  7774328 gtatcttcctcatgaattgattattcaaatcttgatgcggctgccggtgaagtctcttattcatttcaaatgtgtttgtaagctatggttttctcttatc 7774229  T
Q  455 tc 456  Q
    ||    
T  7774228 tc 7774227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 383 - 456
Target Start/End: Original strand, 7907932 - 7908005
Alignment:
Q  383 atcctgctgaggttgccggtgaagtctcttttatgtttcaaatgtgtttgtaagtcatggttttctcttatctc 456  Q
    ||||| ||||||||||||||||||||||||  | ||||||| | |||| |||||||||||||||||||||||||    
T  7907932 atcctactgaggttgccggtgaagtctcttacacgtttcaagtctgttcgtaagtcatggttttctcttatctc 7908005  T

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Target: chr4; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 392 - 456
Target Start/End: Complemental strand, 49049061 - 49048997
Alignment:
Q  392 aggttgccggtgaagtctcttttatgtttcaaatgtgtttgtaagtcatggttttctcttatctc 456  Q
    ||||||| ||||| |||||||||| ||||||| ||||||||||||| ||||||||||||||||||    
T  49049061 aggttgctggtgatgtctcttttacgtttcaagtgtgtttgtaagttatggttttctcttatctc 49048997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 390 - 456
Target Start/End: Original strand, 7800251 - 7800317
Alignment:
Q  390 tgaggttgccggtgaagtctcttttatgtttcaaatgtgtttgtaagtcatggttttctcttatctc 456  Q
    |||||||||||||||||| |||| || ||||||| ||||||||||| ||||||||||||||| ||||    
T  7800251 tgaggttgccggtgaagtatcttatacgtttcaagtgtgtttgtaaatcatggttttctcttgtctc 7800317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 355 - 456
Target Start/End: Original strand, 7877299 - 7877400
Alignment:
Q  355 gtatattccttatgaattaatcattcaaatcctgctgaggttgccggtgaagtctcttttatgtttcaaatgtgtttgtaagtcatggttttctcttatc 454  Q
    |||| ||||| ||||||| || || ||||||||| |  |||||| ||||||||||||| || ||||||||||  ||||||||  ||||||||||||||||    
T  7877299 gtatcttcctcatgaattgattatccaaatcctgatttggttgctggtgaagtctcttatacgtttcaaatgcatttgtaagctatggttttctcttatc 7877398  T
Q  455 tc 456  Q
    ||    
T  7877399 tc 7877400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 367 - 456
Target Start/End: Complemental strand, 48156914 - 48156825
Alignment:
Q  367 tgaattaatcattcaaatcctgctgaggttgccggtgaagtctcttttatgtttcaaatgtgtttgtaagtcatggttttctcttatctc 456  Q
    |||||| || |||||||||||  |  |||| ||||||||||||||| || ||||||| || ||||||||||| |||||||||||||||||    
T  48156914 tgaattgataattcaaatccttttatggttaccggtgaagtctcttctacgtttcaagtgcgtttgtaagtcttggttttctcttatctc 48156825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 360 - 456
Target Start/End: Complemental strand, 45366715 - 45366619
Alignment:
Q  360 ttccttatgaattaatcattcaaatcctgctgaggttgccggtgaagtctcttttatgtttcaaatgtgtttgtaagtcatggttttctcttatctc 456  Q
    ||||| ||||||| || || |||||||| || ||||| || |||||||||||| || ||||||| || ||||||||||  |||||||||||||||||    
T  45366715 ttcctcatgaattgatgatccaaatcctactaaggttaccagtgaagtctcttatacgtttcaagtgcgtttgtaagtattggttttctcttatctc 45366619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 366 - 453
Target Start/End: Original strand, 48902540 - 48902627
Alignment:
Q  366 atgaattaatcattcaaatcctgctgaggttgccggtgaagtctcttttatgtttcaaatgtgtttgtaagtcatggttttctcttat 453  Q
    ||||||| ||||| |||||  ||| | |||||||||| ||||||||  |  |||||||||||||||||||||| ||||||||||||||    
T  48902540 atgaattgatcatccaaattttgcagtggttgccggtaaagtctctcattcgtttcaaatgtgtttgtaagtcttggttttctcttat 48902627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 378 - 456
Target Start/End: Original strand, 48870144 - 48870222
Alignment:
Q  378 ttcaaatcctgctgaggttgccggtgaagtctcttttatgtttcaaatgtgtttgtaagtcatggttttctcttatctc 456  Q
    ||||||| ||||||||| | |||||||| |||||| |  |||||||||| ||||||||||| ||||||| |||||||||    
T  48870144 ttcaaattctgctgaggctaccggtgaattctcttattcgtttcaaatgcgtttgtaagtcttggttttttcttatctc 48870222  T

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Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 378 - 456
Target Start/End: Original strand, 48885830 - 48885908
Alignment:
Q  378 ttcaaatcctgctgaggttgccggtgaagtctcttttatgtttcaaatgtgtttgtaagtcatggttttctcttatctc 456  Q
    ||||||| ||||||||| | |||||||| |||||| |  |||||||||| ||||||||||| ||||||| |||||||||    
T  48885830 ttcaaattctgctgaggctaccggtgaattctcttattcgtttcaaatgcgtttgtaagtcttggttttttcttatctc 48885908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 390 - 456
Target Start/End: Complemental strand, 49041602 - 49041536
Alignment:
Q  390 tgaggttgccggtgaagtctcttttatgtttcaaatgtgtttgtaagtcatggttttctcttatctc 456  Q
    |||| ||||| |||||||||||| | ||||||||||| ||||| ||||| |||||||||||||||||    
T  49041602 tgagattgccagtgaagtctcttatttgtttcaaatgcgtttgcaagtcttggttttctcttatctc 49041536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 392 - 456
Target Start/End: Complemental strand, 48148147 - 48148083
Alignment:
Q  392 aggttgccggtgaagtctcttttatgtttcaaatgtgtttgtaagtcatggttttctcttatctc 456  Q
    ||||| || |||||||||||| |  ||||||||||||| |||||||| |||||||||||||||||    
T  48148147 aggttaccagtgaagtctcttattcgtttcaaatgtgtctgtaagtcttggttttctcttatctc 48148083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 360 - 456
Target Start/End: Original strand, 48898306 - 48898402
Alignment:
Q  360 ttccttatgaattaatcattcaaatcctgctgaggttgccggtgaagtctcttttatgtttcaaatgtgtttgtaagtcatggttttctcttatctc 456  Q
    ||||| |||||||  |||||||||| ||||||||  | || ||||||||||||  | ||||||| |||||||||||||| ||||| || ||||||||    
T  48898306 ttcctcatgaattggtcattcaaattctgctgagtctacctgtgaagtctcttacacgtttcaagtgtgtttgtaagtcttggttctcacttatctc 48898402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 374 - 456
Target Start/End: Original strand, 7765219 - 7765301
Alignment:
Q  374 atcattcaaatcctgctgaggttgccggtgaagtctcttttatgtttcaaatgtgtttgtaagtcatggttttctcttatctc 456  Q
    ||||||||| | ||| ||||||| |||||||||||||| |||  |||||| ||  ||||||||| |||||||||| |||||||    
T  7765219 atcattcaatttctgttgaggttaccggtgaagtctctcttagttttcaagtgcatttgtaagttatggttttctattatctc 7765301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 390 - 456
Target Start/End: Original strand, 48891023 - 48891089
Alignment:
Q  390 tgaggttgccggtgaagtctcttttatgtttcaaatgtgtttgtaagtcatggttttctcttatctc 456  Q
    |||||||  |||| ||||||||| || |||||||||| ||||||||||| |||||||||||| ||||    
T  48891023 tgaggttatcggtaaagtctcttatacgtttcaaatgcgtttgtaagtcttggttttctcttgtctc 48891089  T

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Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 368 - 456
Target Start/End: Original strand, 50668635 - 50668723
Alignment:
Q  368 gaattaatcattcaaatcctgctgaggttgccggtgaagtctcttttatgtttcaaatgtgtttgtaagtcatggttttctcttatctc 456  Q
    ||||| |||||||||||  || |||||||||| ||||| | |||| || ||||||| || |||||||| || ||||||||||| |||||    
T  50668635 gaattgatcattcaaattttggtgaggttgcccgtgaaatatcttatacgtttcaagtgcgtttgtaaatcttggttttctctcatctc 50668723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 390 - 456
Target Start/End: Original strand, 7786057 - 7786123
Alignment:
Q  390 tgaggttgccggtgaagtctcttttatgtttcaaatgtgtttgtaagtcatggttttctcttatctc 456  Q
    |||||||||||||||| |||||| |||  |||||||| |||||||||  |||| ||||| |||||||    
T  7786057 tgaggttgccggtgaaatctcttatattgttcaaatgcgtttgtaagctatggatttctattatctc 7786123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 398 - 456
Target Start/End: Complemental strand, 33134282 - 33134224
Alignment:
Q  398 ccggtgaagtctcttttatgtttcaaatgtgtttgtaagtcatggttttctcttatctc 456  Q
    ||||||||||||||| |  |||||||||| ||||||||| | || ||||||||||||||    
T  33134282 ccggtgaagtctcttattcgtttcaaatgcgtttgtaagccttgattttctcttatctc 33134224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 357 - 450
Target Start/End: Complemental strand, 45385284 - 45385191
Alignment:
Q  357 atattccttatgaattaatcattcaaatcctgctgaggttgccggtgaagtctcttttatgtttcaaatgtgtttgtaagtcatggttttctct 450  Q
    |||| ||| ||||||| || || |||||||| || ||||| || || ||||||||  || |||||||||  ||||||||||| |||||||||||    
T  45385284 atatgcctaatgaattgatgatccaaatcctactaaggttaccagttaagtctctcatacgtttcaaatccgtttgtaagtcttggttttctct 45385191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 389 - 453
Target Start/End: Complemental strand, 37827459 - 37827395
Alignment:
Q  389 ctgaggttgccggtgaagtctcttttatgtttcaaatgtgtttgtaagtcatggttttctcttat 453  Q
    ||||||||| | |||||||||||| || |||| | ||| |||||||||||||||||  |||||||    
T  37827459 ctgaggttgtcagtgaagtctcttataagttttacatgcgtttgtaagtcatggttaactcttat 37827395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 51; Significance: 5e-20; HSPs: 4)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 366 - 456
Target Start/End: Complemental strand, 11006450 - 11006360
Alignment:
Q  366 atgaattaatcattcaaatcctgctgaggttgccggtgaagtctcttttatgtttcaaatgtgtttgtaagtcatggttttctcttatctc 456  Q
    ||||||| ||||| |||||| || ||||||||||||||||||| ||| || ||||||| ||||||||||||||||||||  ||||||||||    
T  11006450 atgaattgatcatacaaatcttgttgaggttgccggtgaagtcacttatacgtttcaagtgtgtttgtaagtcatggttaactcttatctc 11006360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 366 - 456
Target Start/End: Complemental strand, 11025025 - 11024935
Alignment:
Q  366 atgaattaatcattcaaatcctgctgaggttgccggtgaagtctcttttatgtttcaaatgtgtttgtaagtcatggttttctcttatctc 456  Q
    ||||||| ||||| |||||| || ||||||| ||||||||||||||  || |||||||||| |||||||||||||||||  ||||||||||    
T  11025025 atgaattgatcatacaaatcatgttgaggttaccggtgaagtctctcatacgtttcaaatgcgtttgtaagtcatggttagctcttatctc 11024935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 366 - 456
Target Start/End: Complemental strand, 11016013 - 11015923
Alignment:
Q  366 atgaattaatcattcaaatcctgctgaggttgccggtgaagtctcttttatgtttcaaatgtgtttgtaagtcatggttttctcttatctc 456  Q
    ||||||| || || |||||| || ||||||| ||||||||||||||  || |||||||||| ||||||||||||| |||  ||||||||||    
T  11016013 atgaattgataatacaaatcatgttgaggttaccggtgaagtctctcatacgtttcaaatgcgtttgtaagtcattgttagctcttatctc 11015923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 390 - 456
Target Start/End: Complemental strand, 47452371 - 47452305
Alignment:
Q  390 tgaggttgccggtgaagtctcttttatgtttcaaatgtgtttgtaagtcatggttttctcttatctc 456  Q
    ||||||||||||||||||||||| || | ||||| ||  ||| ||||||||||||||||||||||||    
T  47452371 tgaggttgccggtgaagtctcttgtacgcttcaagtgcatttctaagtcatggttttctcttatctc 47452305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 49; Significance: 7e-19; HSPs: 2)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 121 - 201
Target Start/End: Complemental strand, 35535172 - 35535092
Alignment:
Q  121 tttcactattactaacttgaccaaaccctttcatcaaagtattatatttcacaatattaggagccacgttagccaagttca 201  Q
    |||||||||||| | ||||||||||||| || ||||||||||||||| |||||| |||||||||||| |||||||| ||||    
T  35535172 tttcactattaccagcttgaccaaacccattaatcaaagtattatatgtcacaacattaggagccacattagccaacttca 35535092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 367 - 456
Target Start/End: Original strand, 48883373 - 48883465
Alignment:
Q  367 tgaattaatcattcaaatcctgctgaggttgccggtgaagtctcttttatgtttc---aaatgtgtttgtaagtcatggttttctcttatctc 456  Q
    ||||||||||||||||||  || ||||||| |  ||||||||||||||| |||||   ||||||||||||||| | |||||||||||| ||||    
T  48883373 tgaattaatcattcaaattttggtgaggttacatgtgaagtctcttttacgtttcaaaaaatgtgtttgtaagccttggttttctcttctctc 48883465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 44; Significance: 7e-16; HSPs: 5)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 381 - 456
Target Start/End: Original strand, 24322067 - 24322142
Alignment:
Q  381 aaatcctgctgaggttgccggtgaagtctcttttatgtttcaaatgtgtttgtaagtcatggttttctcttatctc 456  Q
    ||||||| || ||||||| ||||||||||||| |  |||||||||| ||||||||||| |||||||||||||||||    
T  24322067 aaatccttctaaggttgctggtgaagtctcttattcgtttcaaatgcgtttgtaagtcttggttttctcttatctc 24322142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 392 - 456
Target Start/End: Original strand, 24340030 - 24340094
Alignment:
Q  392 aggttgccggtgaagtctcttttatgtttcaaatgtgtttgtaagtcatggttttctcttatctc 456  Q
    ||||| ||||| ||||||||| |  ||||||||| ||||||||||||||||||||| ||||||||    
T  24340030 aggttaccggttaagtctcttattcgtttcaaatctgtttgtaagtcatggttttcacttatctc 24340094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 417 - 456
Target Start/End: Original strand, 24366796 - 24366835
Alignment:
Q  417 gtttcaaatgtgtttgtaagtcatggttttctcttatctc 456  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  24366796 gtttcaaatgtgtttgcaagtcatggttttctcttatctc 24366835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 366 - 453
Target Start/End: Original strand, 24415427 - 24415514
Alignment:
Q  366 atgaattaatcattcaaatcctgctgaggttgccggtgaagtctcttttatgtttcaaatgtgtttgtaagtcatggttttctcttat 453  Q
    ||||||| ||||  ||||||||  |||| || ||||| ||||||||| |  |||||||||| ||| ||||||| ||||||||||||||    
T  24415427 atgaattgatcacccaaatcctattgagattaccggttaagtctcttattcgtttcaaatgcgttcgtaagtcttggttttctcttat 24415514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 398 - 456
Target Start/End: Original strand, 24309799 - 24309857
Alignment:
Q  398 ccggtgaagtctcttttatgtttcaaatgtgtttgtaagtcatggttttctcttatctc 456  Q
    ||||| ||||||||| |  |||||||||  |||||||||| ||||||||||||||||||    
T  24309799 ccggttaagtctcttattcgtttcaaatccgtttgtaagttatggttttctcttatctc 24309857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 6)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 371 - 456
Target Start/End: Complemental strand, 29712952 - 29712867
Alignment:
Q  371 ttaatcattcaaatcctgctgaggttgccggtgaagtctcttttatgtttcaaatgtgtttgtaagtcatggttttctcttatctc 456  Q
    |||||||||||||||||  | | ||| ||||||||||||||| |  ||||||| || |||||||||| ||||||||||||||||||    
T  29712952 ttaatcattcaaatccttttaatgttaccggtgaagtctcttattcgtttcaagtgcgtttgtaagttatggttttctcttatctc 29712867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 367 - 450
Target Start/End: Original strand, 29687642 - 29687725
Alignment:
Q  367 tgaattaatcattcaaatcctgctgaggttgccggtgaagtctcttttatgtttcaaatgtgtttgtaagtcatggttttctct 450  Q
    |||||| |||||||||||||| || | ||| || |||||||||||| || | ||||| |||||||||||||| |||||||||||    
T  29687642 tgaattgatcattcaaatccttctaaagttaccagtgaagtctcttatacgcttcaagtgtgtttgtaagtcttggttttctct 29687725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 360 - 453
Target Start/End: Original strand, 29695736 - 29695829
Alignment:
Q  360 ttccttatgaattaatcattcaaatcctgctgaggttgccggtgaagtctcttttatgtttcaaatgtgtttgtaagtcatggttttctcttat 453  Q
    |||||| ||| |||||||||||||||||  | ||||| || || ||||||||| |  |||||||||| |||||||||| |||||| ||||||||    
T  29695736 ttccttttgagttaatcattcaaatcctattaaggttaccagtcaagtctcttattcgtttcaaatgcgtttgtaagttatggttatctcttat 29695829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 390 - 456
Target Start/End: Original strand, 1812039 - 1812105
Alignment:
Q  390 tgaggttgccggtgaagtctcttttatgtttcaaatgtgtttgtaagtcatggttttctcttatctc 456  Q
    ||||||| || ||||||| |||  || ||| |||||| |||||||||| ||||||||||||||||||    
T  1812039 tgaggttaccagtgaagtatctcatacgttccaaatgggtttgtaagttatggttttctcttatctc 1812105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 398 - 456
Target Start/End: Complemental strand, 42562787 - 42562729
Alignment:
Q  398 ccggtgaagtctcttttatgtttcaaatgtgtttgtaagtcatggttttctcttatctc 456  Q
    |||||||| |||||| |  |||||||||| ||||||||||| ||||||||||| |||||    
T  42562787 ccggtgaattctcttattcgtttcaaatgcgtttgtaagtcttggttttctctaatctc 42562729  T

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Target: chr5; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 367 - 456
Target Start/End: Original strand, 178610 - 178699
Alignment:
Q  367 tgaattaatcattcaaatcctgctgaggttgccggtgaagtctcttttatgtttcaaatgtgtttgtaagtcatggttttctcttatctc 456  Q
    |||||| ||||| |||||||| ||  | || || || ||||||||| |  |||||||||||||||||||||| ||||| ||||| |||||    
T  178610 tgaattgatcatccaaatcctacttcgcttaccagttaagtctcttattcgtttcaaatgtgtttgtaagtcttggttatctctcatctc 178699  T

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Target: chr6 (Bit Score: 37; Significance: 0.00000000001; HSPs: 3)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 395 - 455
Target Start/End: Complemental strand, 14193204 - 14193144
Alignment:
Q  395 ttgccggtgaagtctcttttatgtttcaaatgtgtttgtaagtcatggttttctcttatct 455  Q
    |||| |||||||||||| ||| |||||||||||||||||||||  ||| ||||||||||||    
T  14193204 ttgctggtgaagtctctcttaggtttcaaatgtgtttgtaagttttggctttctcttatct 14193144  T

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Target: chr6; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 390 - 456
Target Start/End: Original strand, 21015390 - 21015456
Alignment:
Q  390 tgaggttgccggtgaagtctcttttatgtttcaaatgtgtttgtaagtcatggttttctcttatctc 456  Q
    ||||||| ||||| | ||||||| || ||||||| ||||||||||||| || |||||||||||||||    
T  21015390 tgaggttaccggtcatgtctcttctacgtttcaagtgtgtttgtaagttattgttttctcttatctc 21015456  T

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Target: chr6; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 381 - 456
Target Start/End: Complemental strand, 21980117 - 21980042
Alignment:
Q  381 aaatcctgctgaggttgccggtgaagtctcttttatgtttcaaatgtgtttgtaagtcatggttttctcttatctc 456  Q
    |||||||||| ||||  || || |||||||| | | ||||||| |||||||||||||| ||||||||||| |||||    
T  21980117 aaatcctgctaaggtaaccagtaaagtctctctcacgtttcaagtgtgtttgtaagtcttggttttctctcatctc 21980042  T

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Target: scaffold0508 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0508
Description:

Target: scaffold0508; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 404 - 456
Target Start/End: Original strand, 11890 - 11942
Alignment:
Q  404 aagtctcttttatgtttcaaatgtgtttgtaagtcatggttttctcttatctc 456  Q
    ||||||||| |  |||||||||  |||||||||||||||||||||||||||||    
T  11890 aagtctcttatccgtttcaaatccgtttgtaagtcatggttttctcttatctc 11942  T

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