View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12652_low_3 (Length: 299)
Name: NF12652_low_3
Description: NF12652
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12652_low_3 |
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Alignment Details
Target: chr1 (Bit Score: 271; Significance: 1e-151; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 11 - 285
Target Start/End: Original strand, 23769752 - 23770026
Alignment:
| Q |
11 |
cataggatcactaaaaatacctctctagacccatctccttcatcttttgagctagtaaattgtcttcaatgttacccttgttcttcaaaatcatatttat |
110 |
Q |
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| T |
23769752 |
catagggtcactaaaaatacctctctagacccatctccttcatcttttgagctagtaaattgtcttcaatgttacccttgttcttcaaaatcatatttat |
23769851 |
T |
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| Q |
111 |
ttcattttcaatgtccaaagtaggaaggtattttggtggaacacctggtataagtttctctcttgctatgcaatcaccaatgctaaatggtctttccatt |
210 |
Q |
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| T |
23769852 |
ttcattttcaatgtccaaagtaggaaggtattttggtggaacacctggtataagtttctctcttgctatgcaatcaccaatgctaaatggtctttccatt |
23769951 |
T |
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| Q |
211 |
attctaccttgcctttgtccattgacataagctacaaattacaaacaaaactattgttatttttggtaaataatg |
285 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
23769952 |
attctaccttgcctttgtccattgacataagctacaaattacaaacaaaactattgttatttttggtaaataatg |
23770026 |
T |
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