View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12656_low_2 (Length: 285)
Name: NF12656_low_2
Description: NF12656
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12656_low_2 |
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Alignment Details
Target: chr8 (Bit Score: 242; Significance: 1e-134; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 14 - 267
Target Start/End: Original strand, 40725567 - 40725820
Alignment:
| Q |
14 |
ctgatggagttataataaccaagccaagcatgataggctgcttctttgatgtcattatcaatctttgccattgactgctcaatctgccagaaaatagaac |
113 |
Q |
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| T |
40725567 |
ctgatggagttataataaccaagccaagcatgataggctgcttctttgatgtcattatcaatctttgccattgactgctcaatctgccagaaaatagaac |
40725666 |
T |
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| Q |
114 |
atatataagtatataacagtaggcatcttccacatagcggctataacaaagccacacaaaactaatgtagtcaataacttatcgtcaatcatataagccg |
213 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
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| T |
40725667 |
atatataagtatataacagtaggcatcttccacatagcggctataacaaagccacacaaaactaatgtggtcaataacttatcgtcaatcatataagccg |
40725766 |
T |
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| Q |
214 |
ggaccctgaaatatgatgattaaaatatctatgtacacagggaaatgagaatgc |
267 |
Q |
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|||| ||||||||||| ||||||||||||||||||||||||||||||||||||| |
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| T |
40725767 |
ggacactgaaatatgaggattaaaatatctatgtacacagggaaatgagaatgc |
40725820 |
T |
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