View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12657_low_14 (Length: 232)
Name: NF12657_low_14
Description: NF12657
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12657_low_14 |
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Alignment Details
Target: chr7 (Bit Score: 172; Significance: 1e-92; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 172; E-Value: 1e-92
Query Start/End: Original strand, 15 - 214
Target Start/End: Complemental strand, 41704726 - 41704527
Alignment:
| Q |
15 |
cacagagtgattgttctagagactctaagtgttccccttctgatagagacacactctttcgttgtctttgtaagagaggattccattgggacccttttgc |
114 |
Q |
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| T |
41704726 |
cacagagtgattgttctagagactctaagtgttccccttctgatagagacacactctttcgttgtctttgtaagagaggattccattgggacccttttgc |
41704627 |
T |
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| Q |
115 |
agcaacctgtgtaaggtacaagagagaatccaaatggaaaaccagcttggttgtctcaatagtggttattgcnnnnnnnncattggctgtgattcttgtg |
214 |
Q |
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| T |
41704626 |
agcaacctgtgtaaggtacaagagagaatccaaatggaaaaccagcttggttgtttcaatagtggttattgcttttttttcattggctgtgattcttgtg |
41704527 |
T |
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