View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12658_high_16 (Length: 299)

Name: NF12658_high_16
Description: NF12658
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12658_high_16
NF12658_high_16
[»] chr4 (65 HSPs)
chr4 (23-224)||(55302848-55303049)
chr4 (47-223)||(32950837-32951013)
chr4 (23-224)||(34228583-34228784)
chr4 (23-224)||(25331136-25331337)
chr4 (47-250)||(7007403-7007606)
chr4 (51-224)||(30009677-30009850)
chr4 (23-224)||(41881082-41881284)
chr4 (23-224)||(1112898-1113099)
chr4 (51-218)||(1044840-1045007)
chr4 (23-217)||(12112950-12113144)
chr4 (23-218)||(22202020-22202215)
chr4 (51-224)||(42786717-42786890)
chr4 (51-195)||(25446083-25446227)
chr4 (61-224)||(41320853-41321016)
chr4 (52-194)||(28541732-28541874)
chr4 (51-224)||(39479355-39479530)
chr4 (51-250)||(37046424-37046625)
chr4 (23-203)||(19740929-19741109)
chr4 (51-218)||(3436626-3436793)
chr4 (89-194)||(7249795-7249900)
chr4 (92-224)||(27454078-27454210)
chr4 (23-224)||(46635648-46635843)
chr4 (23-224)||(24130981-24131173)
chr4 (63-224)||(31314742-31314893)
chr4 (54-224)||(5441440-5441610)
chr4 (54-224)||(27768092-27768262)
chr4 (54-224)||(54341180-54341350)
chr4 (55-204)||(53275876-53276025)
chr4 (56-180)||(23464993-23465117)
chr4 (89-224)||(37828402-37828537)
chr4 (54-224)||(51320957-51321127)
chr4 (55-224)||(54853468-54853637)
chr4 (89-224)||(48261198-48261333)
chr4 (54-204)||(37915863-37916013)
chr4 (51-167)||(25504696-25504812)
chr4 (94-223)||(40537161-40537280)
chr4 (54-224)||(32322127-32322297)
chr4 (95-215)||(44770862-44770982)
chr4 (51-187)||(9163109-9163245)
chr4 (130-224)||(8711978-8712072)
chr4 (95-224)||(56445355-56445474)
chr4 (54-224)||(23987250-23987410)
chr4 (51-218)||(39307259-39307426)
chr4 (130-217)||(24736447-24736534)
chr4 (54-160)||(29649731-29649837)
chr4 (95-217)||(12913301-12913413)
chr4 (89-217)||(41725196-41725321)
chr4 (89-219)||(41581794-41581923)
chr4 (153-224)||(11090439-11090510)
chr4 (54-224)||(30967309-30967469)
chr4 (95-180)||(28371001-28371086)
chr4 (54-223)||(28483935-28484093)
chr4 (54-199)||(49501546-49501681)
chr4 (54-199)||(49507611-49507746)
chr4 (89-223)||(36479243-36479366)
chr4 (54-147)||(49834890-49834983)
chr4 (89-147)||(32684065-32684123)
chr4 (89-147)||(5800049-5800107)
chr4 (183-216)||(55047641-55047674)
chr4 (160-224)||(32684008-32684072)
chr4 (125-180)||(20021440-20021495)
chr4 (89-138)||(50018322-50018371)
chr4 (153-201)||(36727972-36728020)
chr4 (160-224)||(49834833-49834897)
chr4 (160-224)||(50018383-50018447)
[»] chr7 (60 HSPs)
chr7 (23-224)||(47914273-47914474)
chr7 (51-224)||(7719259-7719432)
chr7 (23-223)||(43581090-43581290)
chr7 (51-224)||(7718361-7718534)
chr7 (23-224)||(40996648-40996849)
chr7 (23-224)||(47879175-47879376)
chr7 (51-224)||(18914734-18914907)
chr7 (51-224)||(30440831-30441004)
chr7 (51-224)||(34695308-34695481)
chr7 (23-224)||(973191-973392)
chr7 (23-224)||(12893415-12893616)
chr7 (23-224)||(44343395-44343596)
chr7 (51-224)||(39219376-39219548)
chr7 (53-218)||(20275268-20275433)
chr7 (94-224)||(32142916-32143046)
chr7 (51-224)||(34009047-34009221)
chr7 (93-224)||(7113529-7113660)
chr7 (54-224)||(10068498-10068668)
chr7 (93-194)||(43679491-43679592)
chr7 (54-224)||(23101329-23101499)
chr7 (89-224)||(28342413-28342548)
chr7 (54-224)||(3022957-3023127)
chr7 (54-224)||(9882236-9882405)
chr7 (54-224)||(18838420-18838590)
chr7 (54-224)||(39784130-39784300)
chr7 (54-223)||(29614764-29614933)
chr7 (89-196)||(12963767-12963874)
chr7 (56-224)||(28034804-28034972)
chr7 (54-224)||(8675364-8675534)
chr7 (54-224)||(33382668-33382838)
chr7 (95-214)||(43187366-43187485)
chr7 (95-224)||(7993214-7993343)
chr7 (51-156)||(31638910-31639015)
chr7 (89-224)||(12740439-12740573)
chr7 (90-205)||(727587-727692)
chr7 (55-224)||(9179912-9180071)
chr7 (54-224)||(44256765-44256935)
chr7 (98-224)||(19810874-19810990)
chr7 (94-193)||(25805763-25805862)
chr7 (54-224)||(3797066-3797226)
chr7 (55-189)||(32883814-32883948)
chr7 (56-224)||(40460716-40460874)
chr7 (109-224)||(37972866-37972981)
chr7 (89-217)||(19251605-19251723)
chr7 (54-160)||(46405494-46405600)
chr7 (51-180)||(10676463-10676592)
chr7 (125-224)||(41827406-41827505)
chr7 (54-224)||(509687-509847)
chr7 (94-205)||(1470252-1470362)
chr7 (54-158)||(44121965-44122069)
chr7 (54-138)||(33892335-33892419)
chr7 (51-214)||(44623295-44623448)
chr7 (129-207)||(10617024-10617102)
chr7 (54-158)||(37327958-37328062)
chr7 (95-224)||(29585586-29585705)
chr7 (89-147)||(47066770-47066828)
chr7 (94-151)||(447854-447911)
chr7 (94-147)||(17001099-17001152)
chr7 (56-158)||(39028130-39028232)
chr7 (160-217)||(17001049-17001106)
[»] chr6 (19 HSPs)
chr6 (23-224)||(6197477-6197678)
chr6 (51-224)||(1391657-1391830)
chr6 (23-223)||(2300738-2300938)
chr6 (53-209)||(28002700-28002856)
chr6 (23-224)||(29076603-29076805)
chr6 (23-224)||(29111576-29111779)
chr6 (55-224)||(31895733-31895902)
chr6 (23-218)||(7051850-7052045)
chr6 (55-223)||(34759050-34759218)
chr6 (51-223)||(7497109-7497280)
chr6 (89-224)||(14262432-14262567)
chr6 (94-217)||(34773485-34773608)
chr6 (94-224)||(31067569-31067689)
chr6 (51-189)||(656998-657122)
chr6 (89-224)||(30385068-30385191)
chr6 (175-224)||(2238668-2238717)
chr6 (109-224)||(4200436-4200541)
chr6 (94-138)||(3848286-3848330)
chr6 (183-223)||(11113733-11113773)
[»] chr5 (26 HSPs)
chr5 (23-224)||(21147073-21147274)
chr5 (23-219)||(5272923-5273119)
chr5 (55-218)||(7016744-7016907)
chr5 (51-224)||(33656040-33656213)
chr5 (51-204)||(849181-849334)
chr5 (23-219)||(139279-139475)
chr5 (23-224)||(27458949-27459149)
chr5 (23-224)||(32157893-32158098)
chr5 (23-190)||(6460798-6460965)
chr5 (54-224)||(1152102-1152272)
chr5 (89-224)||(13926003-13926138)
chr5 (54-224)||(14000104-14000274)
chr5 (54-224)||(4550256-4550426)
chr5 (52-224)||(9689693-9689864)
chr5 (89-224)||(39852417-39852552)
chr5 (54-217)||(7947579-7947742)
chr5 (53-184)||(14465266-14465397)
chr5 (54-224)||(4240461-4240621)
chr5 (54-224)||(22746334-22746496)
chr5 (94-224)||(5949185-5949305)
chr5 (51-224)||(9220716-9220879)
chr5 (54-158)||(1461203-1461307)
chr5 (98-224)||(40013711-40013827)
chr5 (54-147)||(37013951-37014044)
chr5 (51-81)||(16894044-16894074)
chr5 (160-224)||(37014037-37014101)
[»] chr3 (62 HSPs)
chr3 (23-224)||(20498214-20498415)
chr3 (51-224)||(10139146-10139319)
chr3 (23-224)||(19253832-19254033)
chr3 (51-224)||(996086-996259)
chr3 (51-224)||(3206205-3206378)
chr3 (23-224)||(33807798-33808000)
chr3 (51-224)||(6589597-6589770)
chr3 (51-224)||(37820477-37820650)
chr3 (55-224)||(54625629-54625798)
chr3 (23-224)||(3999645-3999846)
chr3 (23-224)||(44762037-44762238)
chr3 (51-224)||(29448858-29449031)
chr3 (23-218)||(33996547-33996742)
chr3 (51-224)||(40246877-40247050)
chr3 (51-214)||(35337768-35337930)
chr3 (23-224)||(53929128-53929329)
chr3 (23-224)||(25418371-25418572)
chr3 (54-224)||(6035053-6035223)
chr3 (51-209)||(51699495-51699652)
chr3 (23-223)||(52114533-52114734)
chr3 (23-224)||(17946293-17946494)
chr3 (89-224)||(18749683-18749818)
chr3 (54-217)||(40897180-40897343)
chr3 (95-224)||(5825139-5825268)
chr3 (51-189)||(22057795-22057933)
chr3 (47-224)||(27899373-27899540)
chr3 (54-224)||(36674130-36674300)
chr3 (54-224)||(44906513-44906683)
chr3 (51-216)||(29030039-29030203)
chr3 (89-224)||(32580247-32580382)
chr3 (51-170)||(1440006-1440125)
chr3 (94-224)||(34484030-34484160)
chr3 (54-224)||(11431562-11431732)
chr3 (136-224)||(6131233-6131321)
chr3 (23-224)||(26107266-26107467)
chr3 (94-224)||(54628920-54629050)
chr3 (54-204)||(51737746-51737896)
chr3 (54-224)||(52810414-52810584)
chr3 (94-224)||(31646286-31646414)
chr3 (54-224)||(48379193-48379363)
chr3 (89-224)||(50903240-50903375)
chr3 (54-224)||(52617971-52618135)
chr3 (125-224)||(1439894-1439993)
chr3 (54-204)||(20833028-20833178)
chr3 (98-192)||(55235264-55235359)
chr3 (90-250)||(52079999-52080143)
chr3 (89-224)||(37454932-37455057)
chr3 (54-224)||(10728651-10728811)
chr3 (89-224)||(50762060-50762185)
chr3 (54-217)||(39038076-39038229)
chr3 (171-224)||(33807680-33807733)
chr3 (94-158)||(10660611-10660675)
chr3 (89-206)||(6975817-6975924)
chr3 (23-147)||(23753463-23753587)
chr3 (89-158)||(39842550-39842619)
chr3 (153-214)||(44276510-44276571)
chr3 (89-151)||(539477-539539)
chr3 (160-224)||(45862983-45863047)
chr3 (153-224)||(15492867-15492938)
chr3 (161-207)||(12103733-12103779)
chr3 (51-145)||(23535890-23535983)
chr3 (160-224)||(23753407-23753470)
[»] chr2 (35 HSPs)
chr2 (23-224)||(24776362-24776563)
chr2 (23-224)||(16269698-16269899)
chr2 (23-224)||(20605243-20605444)
chr2 (23-224)||(31170626-31170827)
chr2 (23-224)||(12407387-12407588)
chr2 (17-224)||(14198579-14198785)
chr2 (51-224)||(305467-305640)
chr2 (56-224)||(35317102-35317270)
chr2 (23-224)||(43847653-43847854)
chr2 (23-224)||(5093049-5093250)
chr2 (23-224)||(22551765-22551966)
chr2 (17-219)||(32125252-32125456)
chr2 (56-204)||(1789482-1789630)
chr2 (23-184)||(44765782-44765943)
chr2 (54-224)||(10657444-10657614)
chr2 (51-224)||(9120161-9120334)
chr2 (54-224)||(28844593-28844763)
chr2 (54-224)||(33135661-33135830)
chr2 (94-224)||(18177345-18177475)
chr2 (94-224)||(25288237-25288367)
chr2 (89-199)||(26788859-26788969)
chr2 (106-224)||(43078653-43078771)
chr2 (55-147)||(26601279-26601371)
chr2 (54-224)||(28740295-28740455)
chr2 (56-224)||(13833434-13833592)
chr2 (54-158)||(7026642-7026746)
chr2 (98-224)||(10125302-10125418)
chr2 (89-224)||(3463745-3463870)
chr2 (54-147)||(3574885-3574978)
chr2 (95-158)||(379016-379079)
chr2 (160-217)||(6224576-6224633)
chr2 (89-138)||(21370638-21370687)
chr2 (89-147)||(6224626-6224684)
chr2 (160-224)||(215240-215303)
chr2 (54-115)||(215336-215397)
[»] chr8 (37 HSPs)
chr8 (51-224)||(24501812-24501985)
chr8 (23-224)||(2704818-2705019)
chr8 (23-224)||(26374429-26374630)
chr8 (51-224)||(42938116-42938289)
chr8 (51-224)||(42735276-42735449)
chr8 (51-224)||(7506898-7507071)
chr8 (51-224)||(42937387-42937558)
chr8 (23-224)||(5576619-5576821)
chr8 (51-223)||(10392237-10392409)
chr8 (23-224)||(23115168-23115368)
chr8 (23-224)||(41479103-41479294)
chr8 (54-224)||(10295379-10295550)
chr8 (54-224)||(14782134-14782304)
chr8 (54-224)||(26856104-26856274)
chr8 (55-224)||(43959695-43959854)
chr8 (54-224)||(44725809-44725979)
chr8 (51-224)||(43166689-43166862)
chr8 (89-224)||(9288456-9288591)
chr8 (54-224)||(19717880-19718050)
chr8 (94-217)||(4403184-4403307)
chr8 (54-204)||(18958746-18958896)
chr8 (54-224)||(39467467-39467637)
chr8 (96-224)||(4950015-4950143)
chr8 (23-206)||(32711311-32711482)
chr8 (54-224)||(32497562-32497722)
chr8 (54-224)||(18305970-18306130)
chr8 (54-224)||(7466372-7466532)
chr8 (97-217)||(39189822-39189940)
chr8 (97-204)||(13478269-13478376)
chr8 (95-203)||(8410416-8410526)
chr8 (54-158)||(16362233-16362337)
chr8 (54-147)||(31623732-31623825)
chr8 (89-147)||(4031334-4031392)
chr8 (94-224)||(42305794-42305914)
chr8 (89-158)||(37857191-37857260)
chr8 (160-204)||(4031297-4031341)
chr8 (160-224)||(31623818-31623882)
[»] scaffold0400 (1 HSPs)
scaffold0400 (23-224)||(15033-15234)
[»] scaffold0365 (1 HSPs)
scaffold0365 (23-224)||(15676-15877)
[»] chr1 (45 HSPs)
chr1 (23-224)||(19451808-19452009)
chr1 (47-224)||(45760009-45760186)
chr1 (23-224)||(21222146-21222347)
chr1 (23-224)||(6304252-6304454)
chr1 (51-224)||(49198269-49198441)
chr1 (23-218)||(35279671-35279866)
chr1 (51-205)||(45535971-45536125)
chr1 (51-224)||(50192550-50192724)
chr1 (47-224)||(47780734-47780911)
chr1 (55-224)||(35679128-35679297)
chr1 (50-218)||(49418110-49418278)
chr1 (51-224)||(28824373-28824545)
chr1 (23-224)||(47654351-47654553)
chr1 (51-214)||(32588963-32589126)
chr1 (23-189)||(730147-730314)
chr1 (51-224)||(29556131-29556305)
chr1 (94-218)||(31572203-31572327)
chr1 (89-224)||(48177462-48177597)
chr1 (48-195)||(48524343-48524490)
chr1 (54-224)||(6312604-6312774)
chr1 (54-224)||(29396388-29396558)
chr1 (51-224)||(37014640-37014813)
chr1 (54-224)||(51701610-51701780)
chr1 (89-217)||(9577439-9577567)
chr1 (89-224)||(25612222-25612357)
chr1 (54-204)||(46328072-46328222)
chr1 (94-224)||(9322500-9322630)
chr1 (94-224)||(15835053-15835183)
chr1 (51-224)||(33025539-33025703)
chr1 (23-224)||(28387393-28387594)
chr1 (54-224)||(38536099-38536259)
chr1 (54-224)||(38558317-38558477)
chr1 (97-188)||(955823-955904)
chr1 (56-224)||(29219318-29219476)
chr1 (94-214)||(48668795-48668905)
chr1 (54-147)||(18798521-18798614)
chr1 (114-216)||(38319996-38320098)
chr1 (54-138)||(49230916-49231000)
chr1 (89-180)||(51085860-51085951)
chr1 (23-111)||(22183369-22183457)
chr1 (54-209)||(5495121-5495266)
chr1 (97-147)||(31622536-31622586)
chr1 (160-216)||(18798607-18798663)
chr1 (51-190)||(47784414-47784542)
chr1 (23-81)||(953818-953876)
[»] scaffold0151 (1 HSPs)
scaffold0151 (51-224)||(38605-38777)
[»] scaffold0004 (1 HSPs)
scaffold0004 (51-224)||(102129-102302)
[»] scaffold0113 (1 HSPs)
scaffold0113 (51-224)||(38895-39068)
[»] scaffold0037 (1 HSPs)
scaffold0037 (23-218)||(100217-100412)
[»] scaffold0276 (1 HSPs)
scaffold0276 (51-223)||(540-712)
[»] scaffold0042 (1 HSPs)
scaffold0042 (94-224)||(58076-58206)
[»] scaffold1504 (1 HSPs)
scaffold1504 (48-224)||(894-1070)
[»] scaffold0054 (1 HSPs)
scaffold0054 (96-224)||(36907-37035)
[»] scaffold0543 (1 HSPs)
scaffold0543 (94-224)||(10637-10767)
[»] scaffold0110 (1 HSPs)
scaffold0110 (94-224)||(39617-39747)
[»] scaffold0839 (1 HSPs)
scaffold0839 (118-224)||(3692-3798)
[»] scaffold0347 (1 HSPs)
scaffold0347 (153-224)||(14896-14967)
[»] scaffold0306 (1 HSPs)
scaffold0306 (54-158)||(13919-14023)
[»] scaffold0152 (1 HSPs)
scaffold0152 (54-158)||(21304-21408)
[»] scaffold0922 (1 HSPs)
scaffold0922 (54-151)||(4237-4334)
[»] scaffold0007 (1 HSPs)
scaffold0007 (97-190)||(199905-199998)


Alignment Details
Target: chr4 (Bit Score: 140; Significance: 2e-73; HSPs: 65)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 23 - 224
Target Start/End: Original strand, 55302848 - 55303049
Alignment:
Q  23 aagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaa 122  Q
    |||||||||||||||||       |||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||    
T  55302848 aagattctttgtcattttaaaaaagtcatgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaa 55302947  T
Q  123 ttattgtttaataaatcagattttgatggcttttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaagat 222  Q
      ||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  55302948 ggattgtttaataaatcagattttgatggatattgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaagat 55303047  T
Q  223 tg 224  Q
    ||    
T  55303048 tg 55303049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 47 - 223
Target Start/End: Complemental strand, 32951013 - 32950837
Alignment:
Q  47 gtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagatttt 146  Q
    |||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  32951013 gtcatgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttt 32950914  T
Q  147 gatggcttttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaagatt 223  Q
    ||||  |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||    
T  32950913 gatgaattttgtgggattttctagtgaaattttagcatgaaaaattctttcatgaaaacatgagatttcttaagatt 32950837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 23 - 224
Target Start/End: Complemental strand, 34228784 - 34228583
Alignment:
Q  23 aagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaa 122  Q
    |||||||||||||||||       |||||||||||||||||||| | ||||||||||||       ||||||||||||||||||||||| ||||||||||    
T  34228784 aagattctttgtcatttaaaaaaagtcatgtggtattcaatcaaaattcttaatcacttaaaaaaagtctagtggtattcaaaatcattgaaatttcgaa 34228685  T
Q  123 ttattgtttaataaatcagattttgatggcttttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaagat 222  Q
    | ||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  34228684 tgattgtttaataaatcagattttgatggattttgtaggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaagat 34228585  T
Q  223 tg 224  Q
    ||    
T  34228584 tg 34228583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 23 - 224
Target Start/End: Original strand, 25331136 - 25331337
Alignment:
Q  23 aagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaa 122  Q
    |||||||||||||||||       ||| |||||||||||||||||||||||||||||||       |||||||| |||||||||||||||||||||| ||    
T  25331136 aagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtgatattcaaaatcattcaaatttcaaa 25331235  T
Q  123 ttattgtttaataaatcagattttgatggcttttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaagat 222  Q
      ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||    
T  25331236 ggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggat 25331335  T
Q  223 tg 224  Q
    ||    
T  25331336 tg 25331337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 47 - 250
Target Start/End: Original strand, 7007403 - 7007606
Alignment:
Q  47 gtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagatttt 146  Q
    |||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  7007403 gtcatgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttt 7007502  T
Q  147 gatggcttttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaagattgnnnnnnnncttttaagatttta 246  Q
    ||||  |||||||||||||||||||||||||||||||||||||  | |||||||||||||||| ||||||||||||||        ||||||||||||||    
T  7007503 gatgaattttgtgggattttctagtgaaattttagcatgaaaatttttttcatgaaaacatgagatttcttaagattgttttttttcttttaagatttta 7007602  T
Q  247 ctat 250  Q
    ||||    
T  7007603 ctat 7007606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 51 - 224
Target Start/End: Complemental strand, 30009850 - 30009677
Alignment:
Q  51 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatg 150  Q
    |||||||||||||||||||||||||||||||       ||||||||||||||||||||||| ||||||  ||| ||||||||||||||||||||||||||    
T  30009850 tgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcatttaaattttaaatgattgtttaataaatcagattttgatg 30009751  T
Q  151 gcttttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaagattg 224  Q
    | ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  30009750 gattttgtgggattttctagtaaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaagattg 30009677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 23 - 224
Target Start/End: Complemental strand, 41881284 - 41881082
Alignment:
Q  23 aagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnn-gtctagtggtattcaaaatcattcaaatttcga 121  Q
    |||||||||||||||||       ||| |||||||||||||||||||||||||||||||        || ||||||||||||||||||||||||||||||    
T  41881284 aagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaagtttagtggtattcaaaatcattcaaatttcga 41881185  T
Q  122 attattgtttaataaatcagattttgatggcttttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaaga 221  Q
    |  ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||    
T  41881184 aggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttagga 41881085  T
Q  222 ttg 224  Q
    |||    
T  41881084 ttg 41881082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 124; E-Value: 8e-64
Query Start/End: Original strand, 23 - 224
Target Start/End: Original strand, 1112898 - 1113099
Alignment:
Q  23 aagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaa 122  Q
    |||||||||||||||||       ||| |||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||| ||    
T  1112898 aagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcaaa 1112997  T
Q  123 ttattgtttaataaatcagattttgatggcttttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaagat 222  Q
    | ||||||||||||||||||||||||||| ||||||||||||| ||||| |||||||| |||||||||||||||||||||||||||| |||||||| |||    
T  1112998 tgattgtttaataaatcagattttgatggattttgtgggatttcctagtaaaattttaacatgaaaaagtctttcatgaaaacatgagatttcttaggat 1113097  T
Q  223 tg 224  Q
    ||    
T  1113098 tg 1113099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 51 - 218
Target Start/End: Original strand, 1044840 - 1045007
Alignment:
Q  51 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatg 150  Q
    |||||||||||||||||||||||||||||||       |||||||||||||||||| ||||||| |||||||  ||||||||||||||||||||||||||    
T  1044840 tgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaaccattcaactttcgaaggattgtttaataaatcagattttgatg 1044939  T
Q  151 gcttttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttctta 218  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||    
T  1044940 gattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttctta 1045007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 23 - 217
Target Start/End: Original strand, 12112950 - 12113144
Alignment:
Q  23 aagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaa 122  Q
    |||||||||||||||||       ||| |||||||||||||||| ||||||||||||||       ||||| ||||||||||||||||||||||||||||    
T  12112950 aagattctttgtcatttaaaaaaagtcttgtggtattcaatcaaaactcttaatcacttaaaaaaagtctaatggtattcaaaatcattcaaatttcgaa 12113049  T
Q  123 ttattgtttaataaatcagattttgatggcttttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttctt 217  Q
      |||||||||||||||||||||| |||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  12113050 ggattgtttaataaatcagattttaatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 12113144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 23 - 218
Target Start/End: Original strand, 22202020 - 22202215
Alignment:
Q  23 aagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaa 122  Q
    |||||||||||||||||       ||| |||||||||||||||||||||||||||||||       ||||||||||||||||||||||| ||||||| ||    
T  22202020 aagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattaaaatttcaaa 22202119  T
Q  123 ttattgtttaataaatcagattttgatggcttttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttctta 218  Q
      |||||||||||||| | |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||    
T  22202120 agattgtttaataaataaaattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacattagatttctta 22202215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 51 - 224
Target Start/End: Original strand, 42786717 - 42786890
Alignment:
Q  51 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatg 150  Q
    |||||||||||||||||||||||||||| ||       ||||||||||||||||||||||||||||||||||  |||||||||||||||| |||||||||    
T  42786717 tgtggtattcaatcaagactcttaatcatttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcatattttgatg 42786816  T
Q  151 gcttttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaagattg 224  Q
    | |||||||| ||||||||||||||||||| ||| |||||||||||||||||||||||| |||||||| |||||    
T  42786817 gattttgtggaattttctagtgaaattttatcataaaaaagtctttcatgaaaacatgagatttcttatgattg 42786890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 51 - 195
Target Start/End: Original strand, 25446083 - 25446227
Alignment:
Q  51 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatg 150  Q
    |||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  25446083 tgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatg 25446182  T
Q  151 gcttttgtgggattttctagtgaaattttagcatgaaaaagtctt 195  Q
    | |||||||||||||| ||||||||||||||||||||||||||||    
T  25446183 gattttgtgggattttttagtgaaattttagcatgaaaaagtctt 25446227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 61 - 224
Target Start/End: Original strand, 41320853 - 41321016
Alignment:
Q  61 aatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatggcttttgtgg 160  Q
    |||||||||||||||||| ||       ||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||| ||||||||    
T  41320853 aatcaagactcttaatcatttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgg 41320952  T
Q  161 gattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaagattg 224  Q
    ||| ||||||||||||||||| ||||||||||||||||| ||||||||| ||||||||||||||    
T  41320953 gatgttctagtgaaattttagtatgaaaaagtctttcataaaaacatgagatttcttaagattg 41321016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 52 - 194
Target Start/End: Original strand, 28541732 - 28541874
Alignment:
Q  52 gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatgg 151  Q
    ||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  28541732 gtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatgg 28541831  T
Q  152 cttttgtgggattttctagtgaaattttagcatgaaaaagtct 194  Q
     |||||||| |||||||||||||||||||||||||||||||||    
T  28541832 attttgtggaattttctagtgaaattttagcatgaaaaagtct 28541874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 51 - 224
Target Start/End: Complemental strand, 39479530 - 39479355
Alignment:
Q  51 tgtggtattcaatcaagactcttaatcacttnnnnnnn--gtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttga 148  Q
    |||||||||||||||||||||||||||||||         | || |||||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  39479530 tgtggtattcaatcaagactcttaatcacttaaaaaaaaagacttgtggtattcaaaatcattcaaatttcgaagaattgtttaataaatcagattttga 39479431  T
Q  149 tggcttttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaagattg 224  Q
    ||| ||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||| |||||||| |||||    
T  39479430 tggattttgtgggattttctagtgaaattttagcaggaaaaagtctttcatgaaagcatgagatttcttaggattg 39479355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 51 - 250
Target Start/End: Complemental strand, 37046625 - 37046424
Alignment:
Q  51 tgtggtattcaatcaagactcttaatcacttnnnnnnn-gtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgat 149  Q
    |||||||||||||||||||||||||||||||        |||||||| |||| ||||||||||||||||||||  |||||||||||||||||||||||||    
T  37046625 tgtggtattcaatcaagactcttaatcacttaaaaaaaagtctagtgatatttaaaatcattcaaatttcgaaggattgtttaataaatcagattttgat 37046526  T
Q  150 ggcttttgtgggattttctagtg-aaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaagattgnnnnnnnncttttaagattttact 248  Q
    || |||||||| ||||||||||| |||||||||||||||||||||||||||||||| |||| |||||||| |||||        ||||||||||||||||    
T  37046525 ggattttgtggaattttctagtgaaaattttagcatgaaaaagtctttcatgaaaatatgagatttcttaggattgttttttttcttttaagattttact 37046426  T
Q  249 at 250  Q
    ||    
T  37046425 at 37046424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 23 - 203
Target Start/End: Complemental strand, 19741109 - 19740929
Alignment:
Q  23 aagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaa 122  Q
    |||||||||||||||||       ||||||||||||||| |||||||| ||||||||||       |||| |||||||| ||||||||||||||||||||    
T  19741109 aagattctttgtcatttataaaaagtcatgtggtattcagtcaagacttttaatcacttaaaaaaagtcttgtggtattaaaaatcattcaaatttcgaa 19741010  T
Q  123 ttattgtttaataaatcagattttgatggcttttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaa 203  Q
      |||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  19741009 ggattgtttaataaattagattttgatggattttgtgggattttctagtgaaattttagcttgaaaaagtctttcatgaaa 19740929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 51 - 218
Target Start/End: Original strand, 3436626 - 3436793
Alignment:
Q  51 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatg 150  Q
    |||| ||||||||||||||||||||||| ||        |||| ||||||||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  3436626 tgtgatattcaatcaagactcttaatcatttaaaaaaaatctaatggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatg 3436725  T
Q  151 gcttttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttctta 218  Q
      |||||||||||||| ||||||||||||| ||||||||||| |||||||||||||| | ||||||||    
T  3436726 aattttgtgggattttgtagtgaaattttaacatgaaaaagtttttcatgaaaacataagatttctta 3436793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 89 - 194
Target Start/End: Complemental strand, 7249900 - 7249795
Alignment:
Q  89 gtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatggcttttgtgggattttctagtgaaattttagcatgaaa 188  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  7249900 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaa 7249801  T
Q  189 aagtct 194  Q
    ||||||    
T  7249800 aagtct 7249795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 92 - 224
Target Start/End: Complemental strand, 27454210 - 27454078
Alignment:
Q  92 tagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatggcttttgtgggattttctagtgaaattttagcatgaaaaag 191  Q
    ||||||||||||||||||||||||||| |||  ||| ||||||||||||||||||||||  |||||||| |||||||||||||||||| |||||||||||    
T  27454210 tagtggtattcaaaatcattcaaattttgaaagattatttaataaatcagattttgatgaattttgtggaattttctagtgaaattttggcatgaaaaag 27454111  T
Q  192 tctttcatgaaaacatgatatttcttaagattg 224  Q
    |||||||||||||||| |||||| |||||||||    
T  27454110 tctttcatgaaaacataatatttgttaagattg 27454078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 23 - 224
Target Start/End: Complemental strand, 46635843 - 46635648
Alignment:
Q  23 aagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaa 122  Q
    |||||||||||||||||       ||| |||||||||||||||||||||||||||||||       || |||| ||||||||||||||||||||||||||    
T  46635843 aagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtttagtagtattcaaaatcattcaaatttcgaa 46635744  T
Q  123 ttattgtttaataaatcagattttgatggcttttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaagat 222  Q
      |||||||||||||| |||||      | |||||||||||||| |||||||||||||||||||||||||||||||| ||||||||| |||||||| |||    
T  46635743 ggattgtttaataaataagatt------gattttgtgggattttttagtgaaattttagcatgaaaaagtctttcataaaaacatgagatttcttaggat 46635650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 23 - 224
Target Start/End: Complemental strand, 24131173 - 24130981
Alignment:
Q  23 aagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaa 122  Q
    |||||||||||||||||       ||| |||||||||||||||||||||||||||||||       |||||||||||||||||          |||||||    
T  24131173 aagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaa----------tttcgaa 24131084  T
Q  123 ttattgtttaataaatcagattttgatggcttttgtgggattttctagtgaaattttagcatg-aaaaagtctttcatgaaaacatgatatttcttaaga 221  Q
    | ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| ||||| |||||||||||||||||| |||||||| ||    
T  24131083 tgattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttaggatgaaaaaaatctttcatgaaaacatgagatttcttagga 24130984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 63 - 224
Target Start/End: Complemental strand, 31314893 - 31314742
Alignment:
Q  63 tcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatggcttttgtggga 162  Q
    |||||||||||||||||||       ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||          |||||    
T  31314893 tcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttg----------tggga 31314804  T
Q  163 ttttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaagattg 224  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||    
T  31314803 ttttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattg 31314742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 54 - 224
Target Start/End: Original strand, 5441440 - 5441610
Alignment:
Q  54 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatggct 153  Q
    ||||||||||||||||| || |||| ||       |||| |||||||||||||||||||||||||||||  ||||||||||||||  ||||||||||| |    
T  5441440 ggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggat 5441539  T
Q  154 tttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaagattg 224  Q
    ||||||||||||| ||||| ||||||| || |||||||||||||||||||| |||| ||||||| ||||||    
T  5441540 tttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattg 5441610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 54 - 224
Target Start/End: Original strand, 27768092 - 27768262
Alignment:
Q  54 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatggct 153  Q
    ||||||||||||||||| || |||| ||       |||| |||||||||||||||||||||||||||||  ||||||||||||||  ||||||||||| |    
T  27768092 ggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggat 27768191  T
Q  154 tttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaagattg 224  Q
    ||||||||||||| ||||| ||||||| || |||||||||||||||||||| |||| ||||||| ||||||    
T  27768192 tttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattg 27768262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 54 - 224
Target Start/End: Original strand, 54341180 - 54341350
Alignment:
Q  54 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatggct 153  Q
    ||||||||||||||||| || |||| ||       |||| |||||||||||||||||||||||||||||  ||||||||||||||  ||||||||||| |    
T  54341180 ggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggat 54341279  T
Q  154 tttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaagattg 224  Q
    ||||||||||||| ||||| ||||||| || |||||||||||||||||||| |||| ||||||| ||||||    
T  54341280 tttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattg 54341350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 55 - 204
Target Start/End: Original strand, 53275876 - 53276025
Alignment:
Q  55 gtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatggctt 154  Q
    |||||||||||||| | ||||||||||       |||||||| |||| ||||||||||||||||||||  ||||| ||||||||||||||||||||| ||    
T  53275876 gtattcaatcaagatttttaatcacttaaaaaaagtctagtgatatttaaaatcattcaaatttcgaaggattgtgtaataaatcagattttgatggatt 53275975  T
Q  155 ttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaa 204  Q
    ||||| ||||||||| | ||||||||||||||||||||||||||| ||||    
T  53275976 ttgtgagattttctaataaaattttagcatgaaaaagtctttcattaaaa 53276025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 56 - 180
Target Start/End: Original strand, 23464993 - 23465117
Alignment:
Q  56 tattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatggcttt 155  Q
    ||||||||||||||||||||||||||       |||||||||||||||||| |||||||||||||||  |||||||||||||||||| |||||||| |||    
T  23464993 tattcaatcaagactcttaatcacttaaaataagtctagtggtattcaaaaccattcaaatttcgaaggattgtttaataaatcagaatttgatggattt 23465092  T
Q  156 tgtgggattttctagtgaaatttta 180  Q
    |||||||||||||||| ||||||||    
T  23465093 tgtgggattttctagttaaatttta 23465117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 89 - 224
Target Start/End: Complemental strand, 37828537 - 37828402
Alignment:
Q  89 gtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatggcttttgtgggattttctagtgaaattttagcatgaaa 188  Q
    |||| |||||||||||||||||||||||||||||  ||||||||||||||  ||||||||||| |||||||||||||| ||||| |||||||  | ||||    
T  37828537 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaaaaagaaa 37828438  T
Q  189 aagtctttcatgaaaacatgatatttcttaagattg 224  Q
    |||||||||||||||| |||| ||||||| ||||||    
T  37828437 aagtctttcatgaaaagatgagatttcttgagattg 37828402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 54 - 224
Target Start/End: Original strand, 51320957 - 51321127
Alignment:
Q  54 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatggct 153  Q
    ||||||||||||||||| || |||||||       |||| |||||||||||||||||||||||||||||  ||||||||||||||  ||||||||||| |    
T  51320957 ggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggat 51321056  T
Q  154 tttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaagattg 224  Q
    ||||||  ||||| ||||| ||||||| || |||||||| ||||||||||| |||| ||||||| ||||||    
T  51321057 tttgtgtaattttatagtgtaattttaacaagaaaaagtttttcatgaaaagatgagatttcttgagattg 51321127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 55 - 224
Target Start/End: Complemental strand, 54853637 - 54853468
Alignment:
Q  55 gtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatggctt 154  Q
    |||||||||||||||| || |||||||       |||| |||||||||||||| ||||||||||| ||  ||||||||||||||  ||||||||||| ||    
T  54853637 gtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaattattcaaatttcaaaggattgtttaataaattggattttgatggatt 54853538  T
Q  155 ttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaagattg 224  Q
    |||||||||||| ||||| ||||||| || |||||| ||||||||||||| |||| ||||||| ||||||    
T  54853537 ttgtgggattttgtagtgtaattttaacaagaaaaaatctttcatgaaaagatgagatttcttgagattg 54853468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 89 - 224
Target Start/End: Original strand, 48261198 - 48261333
Alignment:
Q  89 gtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatggcttttgtgggattttctagtgaaattttagcatgaaa 188  Q
    |||| ||||||||||||||||||||||||| |||  ||||||||||||||  ||||||||||| |||||||||||||| ||||| ||||||| || ||||    
T  48261198 gtcttgtggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 48261297  T
Q  189 aagtctttcatgaaaacatgatatttcttaagattg 224  Q
    || ||||||||||||| |||| ||||||| ||||||    
T  48261298 aaatctttcatgaaaatatgagatttcttgagattg 48261333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 54 - 204
Target Start/End: Original strand, 37915863 - 37916013
Alignment:
Q  54 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatggct 153  Q
    ||||||||||||||||| || |||||||       |||| |||||||||||||||||||||||||||||  ||||||||||||||  ||||||||||| |    
T  37915863 ggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggat 37915962  T
Q  154 tttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaa 204  Q
    ||||||||||||| ||||| | ||||| || ||||||||| ||||||||||    
T  37915963 tttgtgggattttgtagtgtacttttaacaagaaaaagtcattcatgaaaa 37916013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 51 - 167
Target Start/End: Complemental strand, 25504812 - 25504696
Alignment:
Q  51 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatg 150  Q
    |||| ||||||||||||||||||||||||||       ||| |||| |||||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  25504812 tgtgatattcaatcaagactcttaatcacttaaaaaaagtccagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatg 25504713  T
Q  151 gcttttgtgggattttc 167  Q
    | |||||||||||||||    
T  25504712 gattttgtgggattttc 25504696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 94 - 223
Target Start/End: Complemental strand, 40537280 - 40537161
Alignment:
Q  94 gtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatggcttttgtgggattttctagtgaaattttagcatgaaaaagtc 193  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||| ||||||||||| |||||||          ||||||||||||||||||||||||    
T  40537280 gtggtattcaaaatcatttaaatttcgaatgattgtttaataaatctgattttgatggattttgtg----------gtgaaattttagcatgaaaaagtc 40537191  T
Q  194 tttcatgaaaacatgatatttcttaagatt 223  Q
    |||||||||||||||| |||||||| ||||    
T  40537190 tttcatgaaaacatgagatttcttaggatt 40537161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 54 - 224
Target Start/End: Original strand, 32322127 - 32322297
Alignment:
Q  54 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatggct 153  Q
    ||||||||||||||| | || |||||||       |||| |||||||||||||||||||||||||||||  ||||||||||||||   |||||||||| |    
T  32322127 ggtattcaatcaagatttttcatcacttaaaaatagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgaattttgatggat 32322226  T
Q  154 tttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaagattg 224  Q
    ||||||||||||| ||||| |||||||  | ||||| ||||||||| |||| |||| ||||||| ||||||    
T  32322227 tttgtgggattttgtagtgtaattttaataagaaaatgtctttcataaaaagatgagatttcttgagattg 32322297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 95 - 215
Target Start/End: Complemental strand, 44770982 - 44770862
Alignment:
Q  95 tggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatggcttttgtgggattttctagtgaaattttagcatgaaaaagtct 194  Q
    |||||||||||||||||||||||| |||  ||||||||||||||  ||||||| ||| ||||||||||||||||||||||||||||  | ||||||||||    
T  44770982 tggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttggtggattttgtgggattttctagtgaaattttaagaagaaaaagtct 44770883  T
Q  195 ttcatgaaaacatgatatttc 215  Q
    |||||||  |||||| |||||    
T  44770882 ttcatgacgacatgagatttc 44770862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 51 - 187
Target Start/End: Original strand, 9163109 - 9163245
Alignment:
Q  51 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatg 150  Q
    |||||||||||||||||| | || ||||| |       |||| ||| |||||||||||||||||||||||||  |||||||||||||| | |||||||||    
T  9163109 tgtggtattcaatcaagatttttcatcacataaaaaaagtcttgtgatattcaaaatcattcaaatttcgaaggattgtttaataaattaaattttgatg 9163208  T
Q  151 gcttttgtgggattttctagtgaaattttagcatgaa 187  Q
    | |||||||| ||||||||||||||||||||||||||    
T  9163209 gattttgtggaattttctagtgaaattttagcatgaa 9163245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 130 - 224
Target Start/End: Original strand, 8711978 - 8712072
Alignment:
Q  130 ttaataaatcagattttgatggcttttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaagattg 224  Q
    |||||||||  ||||||||||| |||||||||||||| |||||||||||||||| ||||||||||||||| ||||||||| ||||||| ||||||    
T  8711978 ttaataaattggattttgatggattttgtgggattttatagtgaaattttagcaagaaaaagtctttcatcaaaacatgagatttcttgagattg 8712072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 95 - 224
Target Start/End: Complemental strand, 56445474 - 56445355
Alignment:
Q  95 tggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatggcttttgtgggattttctagtgaaattttagcatgaaaaagtct 194  Q
    ||||||||||||||||||||||||||||| ||||||||||||||          ||| ||||||||||||||||||||||| ||||||| ||||||||||    
T  56445474 tggtattcaaaatcattcaaatttcgaatgattgtttaataaat----------tggattttgtgggattttctagtgaaactttagcaagaaaaagtct 56445385  T
Q  195 ttcatgaaaacatgatatttcttaagattg 224  Q
    ||||| || |||||| ||||||| ||||||    
T  56445384 ttcataaagacatgagatttcttgagattg 56445355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 54 - 224
Target Start/End: Original strand, 23987250 - 23987410
Alignment:
Q  54 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatggct 153  Q
    ||||||||||||| ||| || |||||||       |||| |||||||||||||||||||||||||||||  |||||||||||||| ||||||||||        
T  23987250 ggtattcaatcaaaacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattagattttgat---- 23987345  T
Q  154 tttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaagattg 224  Q
          ||||||| ||||| ||||||| || |||||||||||||||||||| |||| ||||||| ||||||    
T  23987346 ------ggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattg 23987410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 51 - 218
Target Start/End: Complemental strand, 39307426 - 39307259
Alignment:
Q  51 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatg 150  Q
    |||||||||||||||||| |||| |||| ||       |||| |||||||||| ||||||||||||||| ||  ||| |||||| |||    ||||||||    
T  39307426 tgtggtattcaatcaagattcttcatcatttaaaaaaagtcttgtggtattcataatcattcaaatttctaaagattatttaatgaattgagttttgatg 39307327  T
Q  151 gcttttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttctta 218  Q
      |||||||||||||||||||||||||||| ||||||||||| | | || ||||||||| ||||||||    
T  39307326 aattttgtgggattttctagtgaaattttaacatgaaaaagtttctgataaaaacatgagatttctta 39307259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 130 - 217
Target Start/End: Original strand, 24736447 - 24736534
Alignment:
Q  130 ttaataaatcagattttgatggcttttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttctt 217  Q
    |||||||||  ||||||||||| ||||||| |||||||||||||||||||| || ||| ||||||||||||||||||||| |||||||    
T  24736447 ttaataaattggattttgatggattttgtgagattttctagtgaaattttaacaagaagaagtctttcatgaaaacatgagatttctt 24736534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 54 - 160
Target Start/End: Complemental strand, 29649837 - 29649731
Alignment:
Q  54 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatggct 153  Q
    ||||||||||||||||| || |||||||       |||| |||||||||||||||||||||||||||||  ||||||||||||||  ||||||||||| |    
T  29649837 ggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaagattgtttaataaattggattttgatggat 29649738  T
Q  154 tttgtgg 160  Q
    |||||||    
T  29649737 tttgtgg 29649731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 95 - 217
Target Start/End: Original strand, 12913301 - 12913413
Alignment:
Q  95 tggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatggcttttgtgggattttctagtgaaattttagcatgaaaaagtct 194  Q
    |||||||||||||||||||||||| |||  ||||||||||||||          ||| |||||||||||||||||||||||||||| || |||||||| |    
T  12913301 tggtattcaaaatcattcaaattttgaaggattgtttaataaat----------tggattttgtgggattttctagtgaaattttaacaagaaaaagtat 12913390  T
Q  195 ttcatgaaaacatgatatttctt 217  Q
    |||||||| |||||| |||||||    
T  12913391 ttcatgaagacatgagatttctt 12913413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 89 - 217
Target Start/End: Original strand, 41725196 - 41725321
Alignment:
Q  89 gtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatggcttttgtgggattttctagtgaaattttagcatgaaa 188  Q
    |||| ||| ||||||||||||||||||||| |||  |||||||||   ||  ||||||||||  |||||||||||||| ||||| ||||||| || ||||    
T  41725196 gtcttgtgatattcaaaatcattcaaattttgaaggattgtttaa---attggattttgatgaattttgtgggattttatagtgtaattttaacaagaaa 41725292  T
Q  189 aagtctttcatgaaaacatgatatttctt 217  Q
    || ||||||||||||| |||| |||||||    
T  41725293 aaatctttcatgaaaagatgagatttctt 41725321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 89 - 219
Target Start/End: Complemental strand, 41581923 - 41581794
Alignment:
Q  89 gtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatggcttttgtgggattttctagtgaaattttagcatg-aa 187  Q
    |||| |||||||| | | |||||||||||| |||| ||||||||||||||  ||||  |||   |||||||||||||||||||||||||||| |||| ||    
T  41581923 gtctcgtggtatttagagtcattcaaattttgaataattgtttaataaattggatt--gatatattttgtgggattttctagtgaaattttaacatgaaa 41581826  T
Q  188 aaagtctttcatgaaaacatgatatttcttaa 219  Q
    ||| | ||||||| |||||||| |||||||||    
T  41581825 aaaatatttcatgtaaacatgagatttcttaa 41581794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 153 - 224
Target Start/End: Original strand, 11090439 - 11090510
Alignment:
Q  153 ttttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaagattg 224  Q
    |||||||||||||| ||||||||||||||||| ||||||||||| || ||||||||| |||||||| |||||    
T  11090439 ttttgtgggattttttagtgaaattttagcattaaaaagtctttaataaaaacatgagatttcttaggattg 11090510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 54 - 224
Target Start/End: Complemental strand, 30967469 - 30967309
Alignment:
Q  54 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatggct 153  Q
    ||||||||||||||| | || |||||||       |||| |||||||||||||||||||||||||| ||  ||||||||||||||          ||| |    
T  30967469 ggtattcaatcaagatttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcaaaggattgtttaataaat----------tggat 30967380  T
Q  154 tttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaagattg 224  Q
    ||||||||||||| ||||| ||||||| || |||||| ||||||||||||| || | ||||||| ||||||    
T  30967379 tttgtgggattttgtagtgtaattttaacaagaaaaaatctttcatgaaaaaataagatttcttgagattg 30967309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 95 - 180
Target Start/End: Original strand, 28371001 - 28371086
Alignment:
Q  95 tggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatggcttttgtgggattttctagtgaaatttta 180  Q
    ||||||||||||||||||||||||  ||  ||||||||||||||   |||||| ||  ||||||||||||||||||||||||||||    
T  28371001 tggtattcaaaatcattcaaattttaaaggattgtttaataaattgaattttggtgaattttgtgggattttctagtgaaatttta 28371086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 54 - 223
Target Start/End: Original strand, 28483935 - 28484093
Alignment:
Q  54 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatggct 153  Q
    ||||||||||||||||| || |||||||       |||| |||||||||||||||||||||||||||||  ||| ||||||||||          ||| |    
T  28483935 ggtattcaatcaagacttttcatcacttaaaaaaagtctcgtggtattcaaaatcattcaaatttcgaaggattatttaataaat----------tggat 28484024  T
Q  154 tttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaagatt 223  Q
    ||||| ||||||| ||||| || |||| || |||||||||||||||||||| | || |||||||||||||    
T  28484025 tttgtaggattttgtagtgtaa-tttaacaagaaaaagtctttcatgaaaagacgagatttcttaagatt 28484093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 54 - 199
Target Start/End: Complemental strand, 49501681 - 49501546
Alignment:
Q  54 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatggct 153  Q
    ||||||||||||||||| || |||||||       |||| |||| ||||||||||||||||||||||||| ||||||||||||||          ||| |    
T  49501681 ggtattcaatcaagacttttcatcacttaaaaaatgtcttgtggcattcaaaatcattcaaatttcgaatgattgtttaataaat----------tggat 49501592  T
Q  154 tttgtgggattttctagtgaaattttagcatgaaaaagtctttcat 199  Q
    ||||||| ||||| ||||| ||||||| || |||||||||||||||    
T  49501591 tttgtggaattttgtagtgtaattttaacaagaaaaagtctttcat 49501546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 54 - 199
Target Start/End: Complemental strand, 49507746 - 49507611
Alignment:
Q  54 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatggct 153  Q
    ||||||||||||||||| || |||||||       |||| |||| ||||||||||||||||||||||||| ||||||||||||||          ||| |    
T  49507746 ggtattcaatcaagacttttcatcacttaaaaaatgtcttgtggcattcaaaatcattcaaatttcgaatgattgtttaataaat----------tggat 49507657  T
Q  154 tttgtgggattttctagtgaaattttagcatgaaaaagtctttcat 199  Q
    ||||||| ||||| ||||| ||||||| || |||||||||||||||    
T  49507656 tttgtggaattttgtagtgtaattttaacaagaaaaagtctttcat 49507611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 89 - 223
Target Start/End: Complemental strand, 36479366 - 36479243
Alignment:
Q  89 gtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatggcttttgtgggattttctagtgaaattttagcatgaaa 188  Q
    |||| |||||||||||||| ||||||||||||||  ||| ||||||||||  ||||||||||| ||||           ||||||||||||||||  |||    
T  36479366 gtctcgtggtattcaaaattattcaaatttcgaaggattatttaataaattggattttgatggatttt-----------tagtgaaattttagcaaaaaa 36479278  T
Q  189 aagtctttcatgaaaacatgatatttcttaagatt 223  Q
    |||||||| |||||||||||| ||||||| |||||    
T  36479277 aagtcttttatgaaaacatgagatttcttgagatt 36479243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 54 - 147
Target Start/End: Complemental strand, 49834983 - 49834890
Alignment:
Q  54 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttg 147  Q
    ||||||||||||||||| || |||||||       |||| |||||||||||||||||||||||||||||  ||||||||||||||  |||||||    
T  49834983 ggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 49834890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 89 - 147
Target Start/End: Complemental strand, 32684123 - 32684065
Alignment:
Q  89 gtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttg 147  Q
    |||| |||||||||||||||||||||||||||||  ||||||||||||||  |||||||    
T  32684123 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 32684065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 89 - 147
Target Start/End: Original strand, 5800049 - 5800107
Alignment:
Q  89 gtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttg 147  Q
    |||| |||||||||||||||||||||||||| ||  ||||||||||||||  |||||||    
T  5800049 gtcttgtggtattcaaaatcattcaaatttcaaaggattgtttaataaattggattttg 5800107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 183 - 216
Target Start/End: Complemental strand, 55047674 - 55047641
Alignment:
Q  183 atgaaaaagtctttcatgaaaacatgatatttct 216  Q
    ||||||||||||||||||||||||||||||||||    
T  55047674 atgaaaaagtctttcatgaaaacatgatatttct 55047641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 160 - 224
Target Start/End: Complemental strand, 32684072 - 32684008
Alignment:
Q  160 ggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaagattg 224  Q
    ||||||| ||||| ||||||| || |||||||||||||||||||| |||| |||| || ||||||    
T  32684072 ggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttattgagattg 32684008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 125 - 180
Target Start/End: Original strand, 20021440 - 20021495
Alignment:
Q  125 attgtttaataaatcagattttgatggcttttgtgggattttctagtgaaatttta 180  Q
    |||||||||||||| |||||||| ||| |||| ||||||||| || ||||||||||    
T  20021440 attgtttaataaattagattttgctggattttatgggattttttaatgaaatttta 20021495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 89 - 138
Target Start/End: Original strand, 50018322 - 50018371
Alignment:
Q  89 gtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaat 138  Q
    |||| ||||||||||| ||||||||||||| |||  ||||||||||||||    
T  50018322 gtcttgtggtattcaagatcattcaaattttgaaggattgtttaataaat 50018371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 153 - 201
Target Start/End: Complemental strand, 36728020 - 36727972
Alignment:
Q  153 ttttgtgggattttctagtgaaattttagcatgaaaaagtctttcatga 201  Q
    |||||| ||||||| ||||||||||||| || |||||| ||||||||||    
T  36728020 ttttgtaggattttttagtgaaattttaacaagaaaaaatctttcatga 36727972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 160 - 224
Target Start/End: Complemental strand, 49834897 - 49834833
Alignment:
Q  160 ggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaagattg 224  Q
    ||||||| ||||| ||||||| || ||| ||||||||||| |||| |||| ||||||| ||||||    
T  49834897 ggattttgtagtgtaattttaacaagaagaagtctttcattaaaagatgagatttcttgagattg 49834833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 160 - 224
Target Start/End: Original strand, 50018383 - 50018447
Alignment:
Q  160 ggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaagattg 224  Q
    ||||||| ||||| ||||||| || |||||||||||||| ||||| |||| |||| || ||||||    
T  50018383 ggattttgtagtgtaattttaacaagaaaaagtctttcaagaaaagatgagatttattgagattg 50018447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 136; Significance: 6e-71; HSPs: 60)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 23 - 224
Target Start/End: Original strand, 47914273 - 47914474
Alignment:
Q  23 aagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaa 122  Q
    |||||||||||||||||       |||||||||||||||||||||||||||||||||||       |||||||| |||||||||||||||||||||||||    
T  47914273 aagattctttgtcatttaaaaaaagtcatgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtgatattcaaaatcattcaaatttcgaa 47914372  T
Q  123 ttattgtttaataaatcagattttgatggcttttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaagat 222  Q
      |||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  47914373 ggattgtttaataaataagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaagat 47914472  T
Q  223 tg 224  Q
    ||    
T  47914473 tg 47914474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 51 - 224
Target Start/End: Complemental strand, 7719432 - 7719259
Alignment:
Q  51 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatg 150  Q
    |||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  7719432 tgtggtattcaatcaagactcttaatcacttaaaaaaaatctagtggtattcaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatg 7719333  T
Q  151 gcttttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaagattg 224  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||    
T  7719332 gattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattg 7719259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 23 - 223
Target Start/End: Complemental strand, 43581290 - 43581090
Alignment:
Q  23 aagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaa 122  Q
    |||||||||||||||||       ||| ||| |||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||    
T  43581290 aagattctttgtcatttaaaaaaagtcttgttgtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaa 43581191  T
Q  123 ttattgtttaataaatcagattttgatggcttttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaagat 222  Q
      ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||    
T  43581190 ggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggat 43581091  T
Q  223 t 223  Q
    |    
T  43581090 t 43581090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 51 - 224
Target Start/End: Complemental strand, 7718534 - 7718361
Alignment:
Q  51 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatg 150  Q
    |||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  7718534 tgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatg 7718435  T
Q  151 gcttttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaagattg 224  Q
    | |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||| |||||    
T  7718434 gattttgtgggattttctagtgaaattttagcatgaaaaaatctttcatgaaaacatgagatttcttaggattg 7718361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 23 - 224
Target Start/End: Complemental strand, 40996849 - 40996648
Alignment:
Q  23 aagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaa 122  Q
    |||||||||||||||||       ||| ||||||||||||||||||||||||||| |||       ||||||||||||||||||||||||||||||||||    
T  40996849 aagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcgcttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaa 40996750  T
Q  123 ttattgtttaataaatcagattttgatggcttttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaagat 222  Q
      ||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||    
T  40996749 ggattgtttaataaatcagattttgatggattttgtaggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggat 40996650  T
Q  223 tg 224  Q
    ||    
T  40996649 tg 40996648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 23 - 224
Target Start/End: Original strand, 47879175 - 47879376
Alignment:
Q  23 aagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaa 122  Q
    |||||||||||||||||       |||||||||||||||||||||||||||||||||||       |||||||| |||||||||||||||||||||  ||    
T  47879175 aagattctttgtcatttaaaaaaagtcatgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtgatattcaaaatcattcaaatttaaaa 47879274  T
Q  123 ttattgtttaataaatcagattttgatggcttttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaagat 222  Q
      ||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  47879275 ggattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaagat 47879374  T
Q  223 tg 224  Q
    ||    
T  47879375 tg 47879376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 51 - 224
Target Start/End: Complemental strand, 18914907 - 18914734
Alignment:
Q  51 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatg 150  Q
    |||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||| ||   |||||||||||||||||||||||||    
T  18914907 tgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcaaaggtttgtttaataaatcagattttgatg 18914808  T
Q  151 gcttttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaagattg 224  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||    
T  18914807 gattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattg 18914734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 51 - 224
Target Start/End: Original strand, 30440831 - 30441004
Alignment:
Q  51 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatg 150  Q
    |||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  30440831 tgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatg 30440930  T
Q  151 gcttttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaagattg 224  Q
    | ||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||| |||||||| |||||    
T  30440931 gattttgtgggattttctagtgaaattttagtatgaaaaagtctttcgtgaaaacatgagatttcttaggattg 30441004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 51 - 224
Target Start/End: Original strand, 34695308 - 34695481
Alignment:
Q  51 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatg 150  Q
    |||||||||||||||||||||||||||||||       ||| |||||||||||||| |||||||||||||||  ||||||||||||||||||||||||||    
T  34695308 tgtggtattcaatcaagactcttaatcacttaaaaaaagtccagtggtattcaaaaccattcaaatttcgaaggattgtttaataaatcagattttgatg 34695407  T
Q  151 gcttttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaagattg 224  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||    
T  34695408 gattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattg 34695481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 124; E-Value: 8e-64
Query Start/End: Original strand, 23 - 224
Target Start/End: Original strand, 973191 - 973392
Alignment:
Q  23 aagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaa 122  Q
    |||||||||||||||||       ||| |||||||||||||||||||||||||||||||        | |||||||||||||||||||||||||||||||    
T  973191 aagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaatttagtggtattcaaaatcattcaaatttcgaa 973290  T
Q  123 ttattgtttaataaatcagattttgatggcttttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaagat 222  Q
      ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||| |||    
T  973291 ggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggat 973390  T
Q  223 tg 224  Q
    ||    
T  973391 tg 973392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 124; E-Value: 8e-64
Query Start/End: Original strand, 23 - 224
Target Start/End: Original strand, 12893415 - 12893616
Alignment:
Q  23 aagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaa 122  Q
    |||||||||||||||||       ||| ||||||||| |||||||||||||||||||||       ||||| ||||||||||||||||||||||||||||    
T  12893415 aagattctttgtcatttaaaaaaagtcttgtggtatttaatcaagactcttaatcacttaaaaaaagtctaatggtattcaaaatcattcaaatttcgaa 12893514  T
Q  123 ttattgtttaataaatcagattttgatggcttttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaagat 222  Q
      ||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||    
T  12893515 gaattgtttaataaatcagattttgatggattttgtgagattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggat 12893614  T
Q  223 tg 224  Q
    ||    
T  12893615 tg 12893616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 23 - 224
Target Start/End: Complemental strand, 44343596 - 44343395
Alignment:
Q  23 aagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaa 122  Q
    |||||||||||||||||       ||| |||| ||||||||||||||||||||||||||       || |||||||||| ||||||||||||||||||||    
T  44343596 aagattctttgtcatttaaaaaaagtcttgtgatattcaatcaagactcttaatcacttaaaaaaagtttagtggtatttaaaatcattcaaatttcgaa 44343497  T
Q  123 ttattgtttaataaatcagattttgatggcttttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaagat 222  Q
      ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||| |||    
T  44343496 ggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcacgaaaacatgagatttcttaggat 44343397  T
Q  223 tg 224  Q
    ||    
T  44343396 tg 44343395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 51 - 224
Target Start/End: Complemental strand, 39219548 - 39219376
Alignment:
Q  51 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatg 150  Q
    |||| ||||||||||||||||||||||||||       ||||| |||||||||||||||||||||||| || | ||||||||||||||||||||||||||    
T  39219548 tgtgttattcaatcaagactcttaatcacttaaaaaaagtctattggtattcaaaatcattcaaattttga-tgattgtttaataaatcagattttgatg 39219450  T
Q  151 gcttttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaagattg 224  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||| |||||    
T  39219449 gattttgtgggattttctagtgaaattttagcatgaaaaagtctttcataaaaacatgagatttcttaggattg 39219376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 53 - 218
Target Start/End: Complemental strand, 20275433 - 20275268
Alignment:
Q  53 tggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatggc 152  Q
    |||||||||||||||||||||||||||||       ||||  ||||||||||||||||||||||||||||  |||||||||||||||||||||||||||     
T  20275433 tggtattcaatcaagactcttaatcacttaaaaaaagtcttatggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatgga 20275334  T
Q  153 ttttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttctta 218  Q
    |||||||||||||| ||||||||||||||||||||||||||| |||||||| ||||| ||||||||    
T  20275333 ttttgtgggattttttagtgaaattttagcatgaaaaagtctgtcatgaaagcatgagatttctta 20275268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 94 - 224
Target Start/End: Complemental strand, 32143046 - 32142916
Alignment:
Q  94 gtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatggcttttgtgggattttctagtgaaattttagcatgaaaaagtc 193  Q
    ||||||||||||||||||||||||| |||  ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  32143046 gtggtattcaaaatcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 32142947  T
Q  194 tttcatgaaaacatgatatttcttaagattg 224  Q
    || ||| ||||||||| ||||||||||||||    
T  32142946 ttccataaaaacatgagatttcttaagattg 32142916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 51 - 224
Target Start/End: Original strand, 34009047 - 34009221
Alignment:
Q  51 tgtggtattcaatcaagactcttaatcacttnnnnnnngtc-tagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgat 149  Q
    |||||||||||||||| ||||||||||||||       ||| |||||||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  34009047 tgtggtattcaatcaacactcttaatcacttaaaaaaagtcctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgat 34009146  T
Q  150 ggcttttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaagattg 224  Q
    || |||||||| |||||||| | |||||||||||| ||||||||||||| |||||||||| |||||||| |||||    
T  34009147 ggattttgtggaattttctaataaaattttagcataaaaaagtctttcaagaaaacatgagatttcttaggattg 34009221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 93 - 224
Target Start/End: Original strand, 7113529 - 7113660
Alignment:
Q  93 agtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatggcttttgtgggattttctagtgaaattttagcatgaaaaagt 192  Q
    ||||||||||||||| |||||||||||| |  ||||||||||||||||||||||||| | ||||||||||||||||||  ||||||||||||||||||||    
T  7113529 agtggtattcaaaataattcaaatttcgcaggattgtttaataaatcagattttgatagattttgtgggattttctaggaaaattttagcatgaaaaagt 7113628  T
Q  193 ctttcatgaaaacatgatatttcttaagattg 224  Q
    ||||||||||||||||| |||||||| |||||    
T  7113629 ctttcatgaaaacatgaaatttcttaggattg 7113660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 54 - 224
Target Start/End: Original strand, 10068498 - 10068668
Alignment:
Q  54 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatggct 153  Q
    ||||||||||||||| | || |||||||       |||| ||||||||||||||||||||||||| |||  |||||||||||||| | |||||||||| |    
T  10068498 ggtattcaatcaagatttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaattttgaaggattgtttaataaattaaattttgatggat 10068597  T
Q  154 tttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaagattg 224  Q
    ||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| |||| ||| |||||    
T  10068598 tttgtgggattttctagtgaaattttagcatgaaaaagtatttcataaaaacatgagatttgttaggattg 10068668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 93 - 194
Target Start/End: Original strand, 43679491 - 43679592
Alignment:
Q  93 agtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatggcttttgtgggattttctagtgaaattttagcatgaaaaagt 192  Q
    ||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  43679491 agtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagt 43679590  T
Q  193 ct 194  Q
    ||    
T  43679591 ct 43679592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 54 - 224
Target Start/End: Original strand, 23101329 - 23101499
Alignment:
Q  54 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatggct 153  Q
    ||||||||||||||||| || |||| ||       |||| |||||||||||||||||||||||||||||  ||||||||||||||  ||||||||||| |    
T  23101329 ggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggat 23101428  T
Q  154 tttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaagattg 224  Q
    ||||||||||||| ||||| ||||||| || |||||||||||||||||||| |||| ||||||| ||||||    
T  23101429 tttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattg 23101499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 89 - 224
Target Start/End: Original strand, 28342413 - 28342548
Alignment:
Q  89 gtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatggcttttgtgggattttctagtgaaattttagcatgaaa 188  Q
    |||| |||||||||||||||||||||||||||||  ||||||||||||||  ||||||||||| |||||||||||||| ||||| ||||||| || ||||    
T  28342413 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 28342512  T
Q  189 aagtctttcatgaaaacatgatatttcttaagattg 224  Q
    |||||||||||||||| |||| ||||||| ||||||    
T  28342513 aagtctttcatgaaaagatgagatttcttgagattg 28342548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 54 - 224
Target Start/End: Original strand, 3022957 - 3023127
Alignment:
Q  54 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatggct 153  Q
    ||||||||||||||| | || |||||||       |||| |||||||||||||||||||||||||||||  ||||||||||||||  ||||||||||| |    
T  3022957 ggtattcaatcaagatttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggat 3023056  T
Q  154 tttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaagattg 224  Q
    ||||||||||||| ||||| ||||||| || |||||||| ||||||||||| |||| ||||||| ||||||    
T  3023057 tttgtgggattttgtagtgtaattttaacaagaaaaagtttttcatgaaaagatgagatttcttgagattg 3023127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 54 - 224
Target Start/End: Complemental strand, 9882405 - 9882236
Alignment:
Q  54 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatggct 153  Q
    ||||||||||||||||| || |||||||       |||| |||||||||||||||||||||||||||||| ||||||||||||||  ||||||||||| |    
T  9882405 ggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggat 9882306  T
Q  154 tttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaagattg 224  Q
    ||||||||||||| ||||| |||||||  | ||||||||||||||| |||| |||| ||||||| ||||||    
T  9882305 tttgtgggattttgtagtgtaattttaagaagaaaaagtctttcat-aaaaaatgagatttcttgagattg 9882236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 54 - 224
Target Start/End: Original strand, 18838420 - 18838590
Alignment:
Q  54 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatggct 153  Q
    ||||||||||||||||| || ||| |||       |||| |||||||||||||||||||||||||||||  ||||||||||||||  ||||||||||| |    
T  18838420 ggtattcaatcaagacttttcatcgcttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaagattgtttaataaattggattttgatggat 18838519  T
Q  154 tttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaagattg 224  Q
    ||||||||||||| ||||| ||||||| || |||||||| ||||||||||| |||| ||||||| ||||||    
T  18838520 tttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagatgagatttcttgagattg 18838590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 54 - 224
Target Start/End: Original strand, 39784130 - 39784300
Alignment:
Q  54 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatggct 153  Q
    ||||||||||||||||| || |||| ||       |||| |||||||||||||||||| ||||||||||  ||||||||||||||  ||||||||||| |    
T  39784130 ggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcatttaaatttcgaaggattgtttaataaattggattttgatggat 39784229  T
Q  154 tttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaagattg 224  Q
    ||||||||||||| ||||| ||||||| || |||||||||||||||||||| |||| ||||||| ||||||    
T  39784230 tttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattg 39784300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 54 - 223
Target Start/End: Complemental strand, 29614933 - 29614764
Alignment:
Q  54 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatggct 153  Q
    ||||||||||||||||| || |||| ||       |||| ||| |||||||||||||||||||||||||  ||||||||||||||  ||||||||||| |    
T  29614933 ggtattcaatcaagacttttcatcatttaaaaaaagtcttgtgatattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggat 29614834  T
Q  154 tttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaagatt 223  Q
    ||||||||||||| ||||| ||||||| || |||||||||||||||||||| |||| ||||||| |||||    
T  29614833 tttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagatt 29614764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 89 - 196
Target Start/End: Original strand, 12963767 - 12963874
Alignment:
Q  89 gtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatggcttttgtgggattttctagtgaaattttagcatgaaa 188  Q
    |||| ||||||| |||||||||||||||||||||  |||||||||||||| |||||||||||| ||||||||||||||||||||||||||||| | ||||    
T  12963767 gtctcgtggtatccaaaatcattcaaatttcgaaggattgtttaataaattagattttgatggattttgtgggattttctagtgaaattttagtaagaaa 12963866  T
Q  189 aagtcttt 196  Q
    ||||||||    
T  12963867 aagtcttt 12963874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 56 - 224
Target Start/End: Complemental strand, 28034972 - 28034804
Alignment:
Q  56 tattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatggcttt 155  Q
    ||||||||||||||| || |||||||       |||| |||||||||||||| ||||||||||| ||  ||||||||||||||  ||||||||||| |||    
T  28034972 tattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaattattcaaatttcaaaggattgtttaataaattggattttgatggattt 28034873  T
Q  156 tgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaagattg 224  Q
    ||||||||||| ||||| ||||||| ||  ||||||||||||||||||| |||| ||||||| ||||||    
T  28034872 tgtgggattttgtagtgtaattttaacaaaaaaaagtctttcatgaaaagatgagatttcttgagattg 28034804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 54 - 224
Target Start/End: Original strand, 8675364 - 8675534
Alignment:
Q  54 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatggct 153  Q
    ||||||||||||||||| || |||||||       |||| |||||||||||||||||| ||| ||||||  ||||||||||||||  ||||||||||| |    
T  8675364 ggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcatttaaacttcgaaggattgtttaataaattggattttgatggat 8675463  T
Q  154 tttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaagattg 224  Q
    ||||||||||||| ||||| ||||||| || |||||| ||||| ||||||| |||| ||||||| ||||||    
T  8675464 tttgtgggattttgtagtgtaattttaacaagaaaaaatcttttatgaaaagatgagatttcttgagattg 8675534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 54 - 224
Target Start/End: Original strand, 33382668 - 33382838
Alignment:
Q  54 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatggct 153  Q
    ||||||||||||||||| || |||||||       ||||  ||||||||||||||||| ||||||||||  ||||||||||||||  ||||||||||| |    
T  33382668 ggtattcaatcaagacttttcatcacttaaaaaaagtctcatggtattcaaaatcatttaaatttcgaaggattgtttaataaattggattttgatggat 33382767  T
Q  154 tttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaagattg 224  Q
    ||||||||||||| ||||| ||||||| || |||||||||||| ||||||| |||| |||| || ||||||    
T  33382768 tttgtgggattttgtagtgtaattttaacaagaaaaagtcttttatgaaaagatgagatttatttagattg 33382838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 95 - 214
Target Start/End: Complemental strand, 43187485 - 43187366
Alignment:
Q  95 tggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatggcttttgtgggattttctagtgaaattttagcatgaaaaagtct 194  Q
    |||||||||||||||||||||||| |||  ||||||||||||||  ||||||||||  |||||| ||||||||||||||||||||| || ||||||||||    
T  43187485 tggtattcaaaatcattcaaattttgaagcattgtttaataaattggattttgatgaattttgtcggattttctagtgaaattttaacaagaaaaagtct 43187386  T
Q  195 ttcatgaaaacatgatattt 214  Q
    |||||||| |||||| ||||    
T  43187385 ttcatgaagacatgagattt 43187366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 95 - 224
Target Start/End: Original strand, 7993214 - 7993343
Alignment:
Q  95 tggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatggcttttgtgggattttctagtgaaattttagcatgaaaaagtct 194  Q
    ||||||||||||||||||||||||||||  ||||||||||||||   |||||||||| || ||||||||||| ||||| ||||||| || ||||||||||    
T  7993214 tggtattcaaaatcattcaaatttcgaaggattgtttaataaattgaattttgatggattgtgtgggattttgtagtgtaattttaacaagaaaaagtct 7993313  T
Q  195 ttcatgaaaacatgatatttcttaagattg 224  Q
    |||||||||| || | ||||||| ||||||    
T  7993314 ttcatgaaaagataagatttcttgagattg 7993343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 51 - 156
Target Start/End: Original strand, 31638910 - 31639015
Alignment:
Q  51 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatg 150  Q
    |||||||||| ||||||||||||||||||||       ||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  31638910 tgtggtattctatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatg 31639009  T
Q  151 gctttt 156  Q
    | ||||    
T  31639010 gatttt 31639015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 89 - 224
Target Start/End: Original strand, 12740439 - 12740573
Alignment:
Q  89 gtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatggcttttgtgggattttctagtgaaattttagcatgaaa 188  Q
    |||| |||||||||||||||||||||||||| ||  ||||||||||||||  ||||||||| | |||||||||||||| ||||| ||||||| || || |    
T  12740439 gtctcgtggtattcaaaatcattcaaatttcaaaggattgtttaataaatg-gattttgatagattttgtgggattttatagtgtaattttaacaagaga 12740537  T
Q  189 aagtctttcatgaaaacatgatatttcttaagattg 224  Q
    ||||||||||| |||| |||| ||||||||||||||    
T  12740538 aagtctttcataaaaagatgagatttcttaagattg 12740573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 90 - 205
Target Start/End: Original strand, 727587 - 727692
Alignment:
Q  90 tctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatggcttttgtgggattttctagtgaaattttagcatgaaaa 189  Q
    |||||| ||||||||||||||||||||||| ||  ||||||||||||||||||||||          |||||||||||||||||||||||||||||||||    
T  727587 tctagtagtattcaaaatcattcaaatttcaaaggattgtttaataaatcagatttt----------gtgggattttctagtgaaattttagcatgaaaa 727676  T
Q  190 agtctttcatgaaaac 205  Q
    ||||||||||||||||    
T  727677 agtctttcatgaaaac 727692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 55 - 224
Target Start/End: Original strand, 9179912 - 9180071
Alignment:
Q  55 gtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatggctt 154  Q
    ||||||||||||||||||| |||||||       |||| ||||||| |||||||| | ||||| ||||  ||||||||||||||          ||| ||    
T  9179912 gtattcaatcaagactcttcatcacttaaaaaaagtcttgtggtatacaaaatcacttaaattccgaaggattgtttaataaat----------tggatt 9180001  T
Q  155 ttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaagattg 224  Q
    |||||||||||||||||||| ||||||||| |||||||||||||||||||||||| |||||||| |||||    
T  9180002 ttgtgggattttctagtgaatttttagcataaaaaagtctttcatgaaaacatgagatttcttaggattg 9180071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 54 - 224
Target Start/End: Complemental strand, 44256935 - 44256765
Alignment:
Q  54 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatggct 153  Q
    ||||||||||||||||| || |||||||       || | |||||||||||||||||||||||||||||| ||||||||||||||  ||||| ||||  |    
T  44256935 ggtattcaatcaagacttttcatcacttaaaaaaagtatcgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggatttggatgaat 44256836  T
Q  154 tttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaagattg 224  Q
    ||||| |||||||  |||| ||||||| || |||||||| |||||| |||| |||| |||| || ||||||    
T  44256835 tttgttggattttgcagtgtaattttaacaagaaaaagtttttcatcaaaatatgagattttttgagattg 44256765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 98 - 224
Target Start/End: Original strand, 19810874 - 19810990
Alignment:
Q  98 tattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatggcttttgtgggattttctagtgaaattttagcatgaaaaagtctttc 197  Q
    |||||||||||||||||||||| ||| ||||||||||||||          ||| |||||||| ||||||||||||||||||||||| |||| |||||||    
T  19810874 tattcaaaatcattcaaatttcaaatgattgtttaataaat----------tggattttgtggaattttctagtgaaattttagcataaaaatgtctttc 19810963  T
Q  198 atgaaaacatgatatttcttaagattg 224  Q
    |||||||||||| ||||||| ||||||    
T  19810964 atgaaaacatgagatttcttgagattg 19810990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 94 - 193
Target Start/End: Original strand, 25805763 - 25805862
Alignment:
Q  94 gtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatggcttttgtgggattttctagtgaaattttagcatgaaaaagtc 193  Q
    ||||||||||||||||||||||||||| |  ||||||||||||||   ||| |||||| ||||||||||||||||| | |||||||||||||||||||||    
T  25805763 gtggtattcaaaatcattcaaatttcgtaggattgtttaataaattgaattatgatggattttgtgggattttctaataaaattttagcatgaaaaagtc 25805862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 54 - 224
Target Start/End: Complemental strand, 3797226 - 3797066
Alignment:
Q  54 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatggct 153  Q
    ||||||||||||||||| || |||||||       |||| ||||||||||| |||||| |||||| |||  |||||||||||||| ||||||||||||      
T  3797226 ggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaagatcattaaaattttgaaggattgtttaataaattagattttgatgg-- 3797129  T
Q  154 tttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaagattg 224  Q
           |||||||||||||||||||||||||||||||||||| | |||||||| | |||||||| |||||    
T  3797128 -------gattttctagtgaaattttagcatgaaaaagtcttttaagaaaacat-agatttcttaggattg 3797066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 55 - 189
Target Start/End: Original strand, 32883814 - 32883948
Alignment:
Q  55 gtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatggctt 154  Q
    ||||||||| |||||| || |||||||       |||| |||||||||||||||||||||||||||||| |||||||| |||||  ||||||||||| ||    
T  32883814 gtattcaattaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaatgattgtttattaaattggattttgatggatt 32883913  T
Q  155 ttgtgggattttctagtgaaattttagcatgaaaa 189  Q
    | |||||||||| ||||| ||||||| || |||||    
T  32883914 tcgtgggattttgtagtgtaattttaacaagaaaa 32883948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 56 - 224
Target Start/End: Complemental strand, 40460874 - 40460716
Alignment:
Q  56 tattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatggcttt 155  Q
    ||||||||||||||| || |||||||       |||| |||||||||||||||||||||||||||||| ||||||||||||||  |||||||||          
T  40460874 tattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgat------ 40460781  T
Q  156 tgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaagattg 224  Q
        ||||||| ||||| ||||||| || |||||| ||||||||||||| |||| ||||||| ||||||    
T  40460780 ----ggattttgtagtgtaattttaacaagaaaaaatctttcatgaaaatatgagatttcttgagattg 40460716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 109 - 224
Target Start/End: Complemental strand, 37972981 - 37972866
Alignment:
Q  109 attcaaatttcgaattattgtttaataaatcagattttgatggcttttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatg 208  Q
    ||||||||||||||  ||| ||||||||||  ||||||||||| ||||| |||||||| ||||| ||||||| || |||||||||||||||||||| |||    
T  37972981 attcaaatttcgaaggattatttaataaattggattttgatggattttgcgggattttatagtgtaattttaacaagaaaaagtctttcatgaaaagatg 37972882  T
Q  209 atatttcttaagattg 224  Q
    | | ||||| ||||||    
T  37972881 agacttcttgagattg 37972866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 89 - 217
Target Start/End: Original strand, 19251605 - 19251723
Alignment:
Q  89 gtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatggcttttgtgggattttctagtgaaattttagcatgaaa 188  Q
    |||| |||||||||||||||||||||||||||||  ||||||||||||||  |||||||||          ||||||||| ||||||||||||||  |||    
T  19251605 gtctcgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgat----------ggattttcttgtgaaattttagcaataaa 19251694  T
Q  189 aagtctttcatgaaaacatgatatttctt 217  Q
    ||||||||||||||||| ||| |||||||    
T  19251695 aagtctttcatgaaaacctgaaatttctt 19251723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 54 - 160
Target Start/End: Complemental strand, 46405600 - 46405494
Alignment:
Q  54 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatggct 153  Q
    ||||||||||||||||| || |||||||       |||| |||||||||||||||||||||||||| ||| ||||||||||||||  ||||||||||| |    
T  46405600 ggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcaaatgattgtttaataaattggattttgatggat 46405501  T
Q  154 tttgtgg 160  Q
    |||||||    
T  46405500 tttgtgg 46405494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 51 - 180
Target Start/End: Complemental strand, 10676592 - 10676463
Alignment:
Q  51 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatg 150  Q
    |||||||||||||||||||| || |||||||       ||||  | ||||||||||||||||||||||||||  ||||||||||||||  ||||| ||||    
T  10676592 tgtggtattcaatcaagacttttcatcacttaaaaaaagtctcattgtattcaaaatcattcaaatttcgaaggattgtttaataaattggatttggatg 10676493  T
Q  151 gcttttgtgggattttctagtgaaatttta 180  Q
    | |||| ||| ||||||| |||||||||||    
T  10676492 gattttatggaattttcttgtgaaatttta 10676463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 125 - 224
Target Start/End: Original strand, 41827406 - 41827505
Alignment:
Q  125 attgtttaataaatcagattttgatggcttttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaagattg 224  Q
    ||||||||||||||  ||||||||||| |||||||||||| | ||||| ||||||| || ||||| |||||||||||||| |||| ||||||| ||||||    
T  41827406 attgtttaataaattggattttgatggattttgtgggattgtgtagtgtaattttaacaagaaaatgtctttcatgaaaatatgagatttcttgagattg 41827505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 54 - 224
Target Start/End: Original strand, 509687 - 509847
Alignment:
Q  54 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatggct 153  Q
    ||||||||||||||||| || |||| ||       |||| |||||||||||||||||||||||||||||  ||||||||||||||  |||||||||        
T  509687 ggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaacgattgtttaataaattggattttgat---- 509782  T
Q  154 tttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaagattg 224  Q
          ||||||| |||||  |||||| || |||||||||||||||||||| |||| ||||||| ||||||    
T  509783 ------ggattttgtagtgggattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattg 509847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 94 - 205
Target Start/End: Complemental strand, 1470362 - 1470252
Alignment:
Q  94 gtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatggcttttgtgggattttctagtgaaattttagcatgaaaaagtc 193  Q
    ||||||||||||||| |||||||||  ||  |||||||||| ||| |||||||||| | ||||||||||||||||  | |||||||||||||||||| ||    
T  1470362 gtggtattcaaaatcgttcaaattttaaagcattgtttaatgaattagattttgatag-ttttgtgggattttctgataaaattttagcatgaaaaaatc 1470264  T
Q  194 tttcatgaaaac 205  Q
    |||  |||||||    
T  1470263 ttttttgaaaac 1470252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 54 - 158
Target Start/End: Complemental strand, 44122069 - 44121965
Alignment:
Q  54 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatggct 153  Q
    ||||||||||||||||| || |||||||        ||| |||||||||||||||||||||||||||||  ||||||||||||||  ||||||||||| |    
T  44122069 ggtattcaatcaagacttttcatcacttaaaaaaaatcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggat 44121970  T
Q  154 tttgt 158  Q
    |||||    
T  44121969 tttgt 44121965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 54 - 138
Target Start/End: Complemental strand, 33892419 - 33892335
Alignment:
Q  54 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaat 138  Q
    ||||||||||||||||| || |||||||       |||| |||||||||||||||||||||||||||||| |||||| |||||||    
T  33892419 ggtattcaatcaagacttttcatcacttaaacaaagtcttgtggtattcaaaatcattcaaatttcgaatgattgttaaataaat 33892335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 51 - 214
Target Start/End: Complemental strand, 44623448 - 44623295
Alignment:
Q  51 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatg 150  Q
    ||||||||| ||||||||||||| |||||||       |||| ||| |||||||||||||||| ||||| ||  | ||||||||||||          ||    
T  44623448 tgtggtatttaatcaagactcttcatcactttaaaaaggtctcgtgatattcaaaatcattcatatttctaaagactgtttaataaat----------tg 44623359  T
Q  151 gcttttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatattt 214  Q
      |||||||| |||||||||||||||||||| |||||||||||| |||| |||| |||||||||    
T  44623358 aattttgtggaattttctagtgaaattttagaatgaaaaagtctctcataaaaatatgatattt 44623295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 129 - 207
Target Start/End: Original strand, 10617024 - 10617102
Alignment:
Q  129 tttaataaatcagattttgatggcttttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacat 207  Q
    |||||||||| |||||||||||| ||||||| ||||||||||||| ||||||| |  || ||||||||||| |||||||    
T  10617024 tttaataaattagattttgatggattttgtgagattttctagtgatattttagtaataacaagtctttcataaaaacat 10617102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 54 - 158
Target Start/End: Original strand, 37327958 - 37328062
Alignment:
Q  54 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatggct 153  Q
    ||||||||||||||||| || || ||||       |||| |||||||||||||||||||||||||| ||  ||||||||||||||   |||||||||| |    
T  37327958 ggtattcaatcaagacttttcattacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcaaaggattgtttaataaattgaattttgatggat 37328057  T
Q  154 tttgt 158  Q
    |||||    
T  37328058 tttgt 37328062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 95 - 224
Target Start/End: Original strand, 29585586 - 29585705
Alignment:
Q  95 tggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatggcttttgtgggattttctagtgaaattttagcatgaaaaagtct 194  Q
    |||||||||||||||||||||||| |||  |||||||||||| |  |||||||||          ||||||| ||||| ||||||| || ||||||||||    
T  29585586 tggtattcaaaatcattcaaattttgaaggattgtttaataatttggattttgat----------ggattttgtagtgtaattttaacaagaaaaagtct 29585675  T
Q  195 ttcatgaaaacatgatatttcttaagattg 224  Q
    ||||| |||| |||| ||||||| ||||||    
T  29585676 ttcataaaaagatgaaatttcttgagattg 29585705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 89 - 147
Target Start/End: Original strand, 47066770 - 47066828
Alignment:
Q  89 gtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttg 147  Q
    |||| |||||||||||||||||||||||||||||  ||||||||||||||  |||||||    
T  47066770 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 47066828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 94 - 151
Target Start/End: Original strand, 447854 - 447911
Alignment:
Q  94 gtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatgg 151  Q
    |||||||| ||||||||||||||||||||| |||||||||| |||  |||||||||||    
T  447854 gtggtatttaaaatcattcaaatttcgaatgattgtttaattaattggattttgatgg 447911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 94 - 147
Target Start/End: Complemental strand, 17001152 - 17001099
Alignment:
Q  94 gtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttg 147  Q
    |||||||||||||||||||||||||||||  ||||||||||||||  |||||||    
T  17001152 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 17001099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 56 - 158
Target Start/End: Original strand, 39028130 - 39028232
Alignment:
Q  56 tattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatggcttt 155  Q
    ||||||||||||||| || |||||||       |||| ||| ||||||||||| |||||||| ||||  ||||||||||||||  ||||||||||| |||    
T  39028130 tattcaatcaagacttttcatcacttaaaaaaagtcttgtgttattcaaaatcgttcaaattacgaaagattgtttaataaattggattttgatggattt 39028229  T
Q  156 tgt 158  Q
    |||    
T  39028230 tgt 39028232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 160 - 217
Target Start/End: Complemental strand, 17001106 - 17001049
Alignment:
Q  160 ggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttctt 217  Q
    ||||||| ||||| |||| || || |||||||||||||||||||| |||| |||||||    
T  17001106 ggattttgtagtgtaattataacaagaaaaagtctttcatgaaaatatgagatttctt 17001049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 136; Significance: 6e-71; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 23 - 224
Target Start/End: Complemental strand, 6197678 - 6197477
Alignment:
Q  23 aagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaa 122  Q
    |||||||||||||||||       ||| |||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||    
T  6197678 aagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaa 6197579  T
Q  123 ttattgtttaataaatcagattttgatggcttttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaagat 222  Q
      ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||    
T  6197578 ggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggat 6197479  T
Q  223 tg 224  Q
    ||    
T  6197478 tg 6197477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 51 - 224
Target Start/End: Original strand, 1391657 - 1391830
Alignment:
Q  51 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatg 150  Q
    |||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||| |||  ||||||||||||||||||||||||||    
T  1391657 tgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttggaaggattgtttaataaatcagattttgatg 1391756  T
Q  151 gcttttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaagattg 224  Q
    | ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| |||| |||||    
T  1391757 gattttgtgggattttctagtgaaattttggcatgaaaaagtctttcatgaaaacatgagattccttaggattg 1391830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 23 - 223
Target Start/End: Complemental strand, 2300938 - 2300738
Alignment:
Q  23 aagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaa 122  Q
    |||||||||||||||||       ||| ||||||||||||||||||||||| |||||||       ||||| ||||||| ||||||||||||||||||||    
T  2300938 aagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttgatcacttaaaaaaagtctactggtattgaaaatcattcaaatttcgaa 2300839  T
Q  123 ttattgtttaataaatcagattttgatggcttttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaagat 222  Q
      |||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||    
T  2300838 ggattgtttaataaataagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggat 2300739  T
Q  223 t 223  Q
    |    
T  2300738 t 2300738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 53 - 209
Target Start/End: Original strand, 28002700 - 28002856
Alignment:
Q  53 tggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatggc 152  Q
    |||||||||||||||||||||||||||||       |||||||| ||||||||||||||||||||| |||  |||||||||||||||||||||||||||     
T  28002700 tggtattcaatcaagactcttaatcacttaaaaaaagtctagtgatattcaaaatcattcaaatttggaaggattgtttaataaatcagattttgatgga 28002799  T
Q  153 ttttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatga 209  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||||||||||    
T  28002800 ttttgtgaaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatga 28002856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 23 - 224
Target Start/End: Original strand, 29076603 - 29076805
Alignment:
Q  23 aagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnn-gtctagtggtattcaaaatcattcaaatttcga 121  Q
    |||||||||||||||||       ||| |||||||||||||| ||| ||||||||||||        ||||||| |||||||||||||||||||||||||    
T  29076603 aagattctttgtcatttaaaaaaagtcttgtggtattcaatctagattcttaatcacttaaaaaaaagtctagtagtattcaaaatcattcaaatttcga 29076702  T
Q  122 attattgtttaataaatcagattttgatggcttttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaaga 221  Q
    |  ||||||||||||||||||||||||||| |||| | ||||||||||||||||||||||||||||||| |||||||| ||||||||| |||| ||| ||    
T  29076703 aggattgtttaataaatcagattttgatggattttataggattttctagtgaaattttagcatgaaaaaatctttcataaaaacatgagattttttagga 29076802  T
Q  222 ttg 224  Q
    |||    
T  29076803 ttg 29076805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 23 - 224
Target Start/End: Original strand, 29111576 - 29111779
Alignment:
Q  23 aagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnn--gtctagtggtattcaaaatcattcaaatttcg 120  Q
    |||||||||||||||||       ||| |||||||||||||| ||| ||||||||||||         ||||||| ||||||||||||||||||||||||    
T  29111576 aagattctttgtcatttaaaaaaagtcttgtggtattcaatctagattcttaatcacttaaaaaaaaagtctagtagtattcaaaatcattcaaatttcg 29111675  T
Q  121 aattattgtttaataaatcagattttgatggcttttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaag 220  Q
    ||  ||||||||||||||||||||||||||| |||| | ||||||||||||||||||||||||||||||| |||||||| ||||||||| |||| ||| |    
T  29111676 aaggattgtttaataaatcagattttgatggattttataggattttctagtgaaattttagcatgaaaaaatctttcataaaaacatgagattttttagg 29111775  T
Q  221 attg 224  Q
    ||||    
T  29111776 attg 29111779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 55 - 224
Target Start/End: Original strand, 31895733 - 31895902
Alignment:
Q  55 gtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatggctt 154  Q
    |||||||||||||||| || |||| ||       |||| |||||||||||||||||||||||||||||  ||||||||||||||  ||||||||||| ||    
T  31895733 gtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggatt 31895832  T
Q  155 ttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaagattg 224  Q
    |||||||||||||||||| ||||||| || |||||||||||||||||||| |||| ||||||| ||||||    
T  31895833 ttgtgggattttctagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattg 31895902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 23 - 218
Target Start/End: Original strand, 7051850 - 7052045
Alignment:
Q  23 aagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaa 122  Q
    |||||||||||||||||       ||| |||||||| |||||||||||||| |||||||       |||  ||| |||||||||||||||||||||||||    
T  7051850 aagattctttgtcatttaaaaaaagtcttgtggtatacaatcaagactcttcatcacttaaaaaaagtcgtgtgatattcaaaatcattcaaatttcgaa 7051949  T
Q  123 ttattgtttaataaatcagattttgatggcttttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttctta 218  Q
      ||||||||||||||  ||||||||||| |||||| |||||||||||| |||||||||||||||||||| |||||| ||| ||||| ||||||||    
T  7051950 ggattgtttaataaattggattttgatggattttgtaggattttctagtaaaattttagcatgaaaaagtttttcataaaatcatgagatttctta 7052045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 55 - 223
Target Start/End: Complemental strand, 34759218 - 34759050
Alignment:
Q  55 gtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatggctt 154  Q
    |||||||||||||||| || |||||||       |||| |||||||||||||||||||||||||| ||  ||||||||||||||  ||||||||||| ||    
T  34759218 gtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttccaaggattgtttaataaattggattttgatggatt 34759119  T
Q  155 ttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaagatt 223  Q
    |||||||||||| ||||| ||||||| || |||||| ||||||||||||| |||| ||||||| |||||    
T  34759118 ttgtgggattttgtagtgtaattttaacaagaaaaaatctttcatgaaaagatgagatttcttgagatt 34759050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 51 - 223
Target Start/End: Original strand, 7497109 - 7497280
Alignment:
Q  51 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatg 150  Q
    |||||||||||||||||| | || |||||||       |||| |||||||||||||||||||||||||||||  | ||||||||||||  ||||||||||    
T  7497109 tgtggtattcaatcaagatttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggagtgtttaataaattggattttgatg 7497208  T
Q  151 gcttttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaagatt 223  Q
    | |||||| ||||||| ||||| ||||||| || |||||||||||||||||||| |||| ||||||| |||||    
T  7497209 gattttgt-ggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagatt 7497280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 89 - 224
Target Start/End: Complemental strand, 14262567 - 14262432
Alignment:
Q  89 gtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatggcttttgtgggattttctagtgaaattttagcatgaaa 188  Q
    |||| |||||||||||||||||| ||||||||||  ||||||||||||||  ||||||||||| |||||||||||||| ||||| ||||||| || ||||    
T  14262567 gtcttgtggtattcaaaatcatttaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 14262468  T
Q  189 aagtctttcatgaaaacatgatatttcttaagattg 224  Q
    |||||||||||||||| |||  ||||||| ||||||    
T  14262467 aagtctttcatgaaaagatgggatttcttgagattg 14262432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 94 - 217
Target Start/End: Original strand, 34773485 - 34773608
Alignment:
Q  94 gtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatggcttttgtgggattttctagtgaaattttagcatgaaaaagtc 193  Q
    |||||||||||||||||||||||||||||  ||||||||||||||  ||||||||||| ||||||||||||||  |||| ||||||| || |||||||||    
T  34773485 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgcagtgtaattttaacaagaaaaagtc 34773584  T
Q  194 tttcatgaaaacatgatatttctt 217  Q
    ||||||||||| |||| |||||||    
T  34773585 tttcatgaaaagatgagatttctt 34773608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 94 - 224
Target Start/End: Original strand, 31067569 - 31067689
Alignment:
Q  94 gtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatggcttttgtgggattttctagtgaaattttagcatgaaaaagtc 193  Q
    |||||||||||||||||||||||||||||  ||||||||||||||          ||| |||||||||||||| ||||| ||||||| || |||||||||    
T  31067569 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtc 31067658  T
Q  194 tttcatgaaaacatgatatttcttaagattg 224  Q
    |||||| |||| |||| ||||||| ||||||    
T  31067659 tttcataaaaagatgagatttcttgagattg 31067689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 51 - 189
Target Start/End: Original strand, 656998 - 657122
Alignment:
Q  51 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatg 150  Q
    |||||||||||||||||||||||||||||||       |||||||||||||| ||||||||||||||           ||||||||||| |||| |||||    
T  656998 tgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattctaaatcattcaaatt-----------tttaataaatctgattctgatg 657086  T
Q  151 gcttttgtgggattttctagtgaaattttagcatgaaaa 189  Q
    | ||||||||||||   ||||||||||||| ||||||||    
T  657087 gattttgtgggatt---tagtgaaattttatcatgaaaa 657122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 89 - 224
Target Start/End: Complemental strand, 30385191 - 30385068
Alignment:
Q  89 gtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatggcttttgtgggattttctagtgaaattttagcatgaaa 188  Q
    |||| |||||||||||||||||||||||||||||  ||||||||||||||          ||| |||||||||||||| ||||| ||||||| ||  | |    
T  30385191 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaaca--aca 30385104  T
Q  189 aagtctttcatgaaaacatgatatttcttaagattg 224  Q
    |||||||||||||||| |||| ||||||| ||||||    
T  30385103 aagtctttcatgaaaagatgagatttcttgagattg 30385068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 175 - 224
Target Start/End: Original strand, 2238668 - 2238717
Alignment:
Q  175 attttagcatgaaaaagtctttcatgaaaacatgatatttcttaagattg 224  Q
    ||||||| |||||||| |||||||||||||||||| ||||||||||||||    
T  2238668 attttagtatgaaaaaatctttcatgaaaacatgagatttcttaagattg 2238717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 109 - 224
Target Start/End: Complemental strand, 4200541 - 4200436
Alignment:
Q  109 attcaaatttcgaattattgtttaataaatcagattttgatggcttttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatg 208  Q
    ||||||||||||||  ||||||||||||||  |||||||||          ||||||| ||||| ||||||| || |||||||||||||||||||| |||    
T  4200541 attcaaatttcgaaggattgtttaataaattggattttgat----------ggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatg 4200452  T
Q  209 atatttcttaagattg 224  Q
    | ||||||| ||||||    
T  4200451 agatttcttgagattg 4200436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 94 - 138
Target Start/End: Original strand, 3848286 - 3848330
Alignment:
Q  94 gtggtattcaaaatcattcaaatttcgaattattgtttaataaat 138  Q
    |||||||||||||||||| |||||| |||| ||||||||||||||    
T  3848286 gtggtattcaaaatcatttaaattttgaatgattgtttaataaat 3848330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 183 - 223
Target Start/End: Complemental strand, 11113773 - 11113733
Alignment:
Q  183 atgaaaaagtctttcatgaaaacatgatatttcttaagatt 223  Q
    ||||||| ||||||||||||||||||| |||||||| ||||    
T  11113773 atgaaaacgtctttcatgaaaacatgagatttcttaggatt 11113733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 136; Significance: 6e-71; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 23 - 224
Target Start/End: Original strand, 21147073 - 21147274
Alignment:
Q  23 aagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaa 122  Q
    |||||||||||||||||       ||| |||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||    
T  21147073 aagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaa 21147172  T
Q  123 ttattgtttaataaatcagattttgatggcttttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaagat 222  Q
      ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||    
T  21147173 ggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggat 21147272  T
Q  223 tg 224  Q
    ||    
T  21147273 tg 21147274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 23 - 219
Target Start/End: Complemental strand, 5273119 - 5272923
Alignment:
Q  23 aagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaa 122  Q
    |||||||||||||||||       ||| | |||||||||||||||||||||||||| ||       ||||||||||||||||||||||||||||||||||    
T  5273119 aagattctttgtcatttaaaaaaagtcttatggtattcaatcaagactcttaatcatttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaa 5273020  T
Q  123 ttattgtttaataaatcagattttgatggcttttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaa 219  Q
    | ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||    
T  5273019 tgattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcataaaaacatgagatttcttaa 5272923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 55 - 218
Target Start/End: Complemental strand, 7016907 - 7016744
Alignment:
Q  55 gtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatggctt 154  Q
    |||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||| ||    
T  7016907 gtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggatt 7016808  T
Q  155 ttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttctta 218  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||    
T  7016807 ttgtgggattttctagtgaaattttagcatgaaaaagtctttcataaaaacatgagatttctta 7016744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 51 - 224
Target Start/End: Complemental strand, 33656213 - 33656040
Alignment:
Q  51 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatg 150  Q
    |||||||||||||||||||||||||||||||        |||| ||||||||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  33656213 tgtggtattcaatcaagactcttaatcacttaaaaaaaatctaatggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatg 33656114  T
Q  151 gcttttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaagattg 224  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||| |||||    
T  33656113 gattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaatatgagatttcttaggattg 33656040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 51 - 204
Target Start/End: Original strand, 849181 - 849334
Alignment:
Q  51 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatg 150  Q
    |||||||||||||||||||||||||||||||       ||||| ||||||||||||||||||||||||||||  |||||||||||||||||||||||||     
T  849181 tgtggtattcaatcaagactcttaatcacttaaaaaaagtctaatggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgata 849280  T
Q  151 gcttttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaa 204  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  849281 gattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaa 849334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 23 - 219
Target Start/End: Original strand, 139279 - 139475
Alignment:
Q  23 aagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaa 122  Q
    |||||||||||||||||       |||||||||||||||||||||||| ||||||||||       ||||||||||||||||||||||||||||||||||    
T  139279 aagattctttgtcatttaaaaaaagtcatgtggtattcaatcaagacttttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaa 139378  T
Q  123 ttattgtttaataaatcagattttgatggcttttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaa 219  Q
      ||||||||||||| ||||||||||||| |||||| |||||||| ||||||||||||  ||||||||||||||||| ||||||||| |||||||||    
T  139379 ggattgtttaataaaccagattttgatggattttgttggattttccagtgaaattttaatatgaaaaagtctttcataaaaacatgagatttcttaa 139475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 23 - 224
Target Start/End: Complemental strand, 27459149 - 27458949
Alignment:
Q  23 aagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaa 122  Q
    |||||||||||||||||       ||| ||| |||||||||||||||||||||||||||       ||||||||||||||||||||||||| |||| |||    
T  27459149 aagattctttgtcatttaaaaaaagtcttgtagtattcaatcaagactcttaatcacttaaaaaa-gtctagtggtattcaaaatcattcagattttgaa 27459051  T
Q  123 ttattgtttaataaatcagattttgatggcttttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaagat 222  Q
      |||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||| |||    
T  27459050 ggattgtttaataaattagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaaatcattcatgaaaacatgatatttcttaggat 27458951  T
Q  223 tg 224  Q
    ||    
T  27458950 tg 27458949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 23 - 224
Target Start/End: Complemental strand, 32158098 - 32157893
Alignment:
Q  23 aagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnn-gtctagtggtattcaaaatcattcaaatttcga 121  Q
    |||||||||||||||||       ||| ||||||||||||||||||| | |||||||||        |||||||||||||||||||||||||||||||||    
T  32158098 aagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagacccctaatcacttaaaaaaaagtctagtggtattcaaaatcattcaaatttcga 32157999  T
Q  122 attattgtttaataaatcagattttgatggcttttgtgggattttctagtgaaattttagcatgaaaa---agtctttcatgaaaacatgatatttctta 218  Q
    |  |||||||||||||| ||||||||| || ||||||||||||||||||| ||||||||||| |||||   |||||||||||||||||||| ||||||||    
T  32157998 aggattgtttaataaattagattttgacggattttgtgggattttctagtaaaattttagcacgaaaaaatagtctttcatgaaaacatgagatttctta 32157899  T
Q  219 agattg 224  Q
    | ||||    
T  32157898 aaattg 32157893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 23 - 190
Target Start/End: Original strand, 6460798 - 6460965
Alignment:
Q  23 aagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaa 122  Q
    |||||||||||||||||       ||||||| |||||||||||||||||||||||| ||        |||||||||||||||||||||||||||||||||    
T  6460798 aagattctttgtcatttaaaaaaagtcatgtcgtattcaatcaagactcttaatcatttaaaaaaaatctagtggtattcaaaatcattcaaatttcgaa 6460897  T
Q  123 ttattgtttaataaatcagattttgatggcttttgtgggattttctagtgaaattttagcatgaaaaa 190  Q
       |||||||||||||||||||||||||| ||||| |||||||||||||||||||||| |||||||||    
T  6460898 ggtttgtttaataaatcagattttgatggattttgagggattttctagtgaaattttatcatgaaaaa 6460965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 54 - 224
Target Start/End: Complemental strand, 1152272 - 1152102
Alignment:
Q  54 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatggct 153  Q
    ||||||||||||||||| || |||||||       |||| ||||||||||||||||||||||||||||   ||||||||||||||  ||||||||||| |    
T  1152272 ggtattcaatcaagactttttatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgagggattgtttaataaattggattttgatggat 1152173  T
Q  154 tttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaagattg 224  Q
    ||||||||||||| ||||| ||||||| || |||||||||||| ||||||| |||| ||||||||||||||    
T  1152172 tttgtgggattttgtagtgtaattttaacaagaaaaagtcttttatgaaaagatgagatttcttaagattg 1152102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 89 - 224
Target Start/End: Original strand, 13926003 - 13926138
Alignment:
Q  89 gtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatggcttttgtgggattttctagtgaaattttagcatgaaa 188  Q
    |||| |||||||||||||||||||||||||||||  ||||||||||||||  ||||||||||| |||||||||||||| ||||| ||||||| || ||||    
T  13926003 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 13926102  T
Q  189 aagtctttcatgaaaacatgatatttcttaagattg 224  Q
    |||||||||| ||||| |||||||||||| ||||||    
T  13926103 aagtctttcaagaaaagatgatatttcttgagattg 13926138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 54 - 224
Target Start/End: Complemental strand, 14000274 - 14000104
Alignment:
Q  54 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatggct 153  Q
    ||||||||||||||||| || |||| ||       |||| ||||||||||||||||||||||||| |||  ||||||||||||||  ||||||||||| |    
T  14000274 ggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttgatggat 14000175  T
Q  154 tttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaagattg 224  Q
    ||||||||||||| ||||| ||||||| || |||||||||||||||||||| |||| ||||||| ||||||    
T  14000174 tttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattg 14000104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 54 - 224
Target Start/End: Complemental strand, 4550426 - 4550256
Alignment:
Q  54 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatggct 153  Q
    ||||||||||||||||| || |||||||       |||| |||||||||||||||||||||||||||||  ||||||||||||||  ||||||||||| |    
T  4550426 ggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggat 4550327  T
Q  154 tttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaagattg 224  Q
    ||||||| ||||| ||||| ||||||| || |||| ||||||||||||||| |||| |||| || ||||||    
T  4550326 tttgtggaattttgtagtgtaattttaacaagaaagagtctttcatgaaaagatgagatttgttgagattg 4550256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 52 - 224
Target Start/End: Original strand, 9689693 - 9689864
Alignment:
Q  52 gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatgg 151  Q
    |||||||||||||||||||||| |||||||       |||| |||||||| ||||||||| ||||||||||| ||||||| |||||| ||||||||||||    
T  9689693 gtggtattcaatcaagactcttcatcacttaaaaaaagtcttgtggtatttaaaatcatt-aaatttcgaatgattgtttgataaattagattttgatgg 9689791  T
Q  152 cttttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaagattg 224  Q
     || |||| |||||||| || ||||||||  ||||||||||||||||| ||||||| | |||||||| |||||    
T  9689792 attgtgtgagattttcttgtaaaattttattatgaaaaagtctttcataaaaacataagatttcttatgattg 9689864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 89 - 224
Target Start/End: Original strand, 39852417 - 39852552
Alignment:
Q  89 gtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatggcttttgtgggattttctagtgaaattttagcatgaaa 188  Q
    |||| |||||||||||||||||||||||||||||  |||||||| |||||  ||||||||||| |||| ||||||||| ||||| ||||||| || ||||    
T  39852417 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttactaaattggattttgatggattttatgggattttgtagtgtaattttaacaagaaa 39852516  T
Q  189 aagtctttcatgaaaacatgatatttcttaagattg 224  Q
    |||||||||||||||| |||| ||||||| ||||||    
T  39852517 aagtctttcatgaaaagatgagatttcttgagattg 39852552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 54 - 217
Target Start/End: Complemental strand, 7947742 - 7947579
Alignment:
Q  54 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatggct 153  Q
    ||||||||||||||||| || |||||||       |||| | | |||||||||||||||||||||||||  ||||||||||||||  ||||||||||| |    
T  7947742 ggtattcaatcaagacttttcatcacttaaaaaaagtcttgcgatattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggat 7947643  T
Q  154 tttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttctt 217  Q
    ||||||| ||||| ||||| ||||||| || |||||||||||||||||||| | || |||||||    
T  7947642 tttgtggaattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagaagagatttctt 7947579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 53 - 184
Target Start/End: Complemental strand, 14465397 - 14465266
Alignment:
Q  53 tggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatggc 152  Q
    ||||||||||||||||||||| ||| |||       |||| |||||||||||||||||||||||||||||  ||||||||||||||| ||||||||||      
T  14465397 tggtattcaatcaagactcttcatcgcttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaagattgtttaataaatcggattttgatgaa 14465298  T
Q  153 ttttgtgggattttctagtgaaattttagcat 184  Q
    |||||||| |||||||||| | ||||||||||    
T  14465297 ttttgtggaattttctagtaatattttagcat 14465266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 54 - 224
Target Start/End: Complemental strand, 4240621 - 4240461
Alignment:
Q  54 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatggct 153  Q
    ||||||||||||||||| || |||||||       |||| |||||||||||||||||||||||||||||  ||||||||||||||  |||||||||        
T  4240621 ggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgat---- 4240526  T
Q  154 tttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaagattg 224  Q
          ||||||| ||||| ||||||| || |||||||||||||||||| | |||| ||||||| ||||||    
T  4240525 ------ggattttgtagtgtaattttaacaagaaaaagtctttcatgaatagatgagatttcttgagattg 4240461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 54 - 224
Target Start/End: Original strand, 22746334 - 22746496
Alignment:
Q  54 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatggct 153  Q
    ||||||||||||| ||| || |||||||       |||| ||| |||||||||||||||||||||||||| ||||||||||||||   |||||||||| |    
T  22746334 ggtattcaatcaaaacttttcatcacttaaaaaaagtcttgtgatattcaaaatcattcaaatttcgaatgattgtttaataaattgaattttgatggat 22746433  T
Q  154 tttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaagattg 224  Q
    |||||||||        || ||||||| || |||||| ||||||||||||| || | ||||||||||||||    
T  22746434 tttgtggga--------tgtaattttaacaagaaaaactctttcatgaaaagataagatttcttaagattg 22746496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 94 - 224
Target Start/End: Original strand, 5949185 - 5949305
Alignment:
Q  94 gtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatggcttttgtgggattttctagtgaaattttagcatgaaaaagtc 193  Q
    |||||||||||||||||||||||||||||  ||||||||||||||  |||||||||          ||||||| ||||| ||||||| || |||||||||    
T  5949185 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgat----------ggattttgtagtgtaattttaacaagaaaaagtc 5949274  T
Q  194 tttcatgaaaacatgatatttcttaagattg 224  Q
    ||||||||||| |||| ||||||| ||||||    
T  5949275 tttcatgaaaagatgagatttcttgagattg 5949305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 51 - 224
Target Start/End: Complemental strand, 9220879 - 9220716
Alignment:
Q  51 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatg 150  Q
    |||| |||||||||||||||||| |||||||       ||||  || |||||||||||||||||||||| ||  |||||||||| ||| ||| ||||       
T  9220879 tgtgatattcaatcaagactctttatcacttaaaaaaagtcttatgatattcaaaatcattcaaatttctaaggattgtttaatgaattagaatttg--- 9220783  T
Q  151 gcttttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaagattg 224  Q
           | ||||||| |||| |||||||| || ||||||||||||| |||||||||||||||||||| |||||    
T  9220782 -------taggattttatagtaaaattttaacacgaaaaagtctttcgtgaaaacatgatatttcttaggattg 9220716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 54 - 158
Target Start/End: Complemental strand, 1461307 - 1461203
Alignment:
Q  54 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatggct 153  Q
    ||||||||||||||||| || |||||||       |||| | | |||||||||||||||||||||||||  ||||||||||||||  ||||||||||| |    
T  1461307 ggtattcaatcaagacttttcatcacttaaaaaaagtcttgcgctattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggat 1461208  T
Q  154 tttgt 158  Q
    |||||    
T  1461207 tttgt 1461203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 98 - 224
Target Start/End: Complemental strand, 40013827 - 40013711
Alignment:
Q  98 tattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatggcttttgtgggattttctagtgaaattttagcatgaaaaagtctttc 197  Q
    |||||||||||||||||||||||||  |||||||||| |||  |||||| |||| ||||||          |||| ||||||| || |||||||||||||    
T  40013827 tattcaaaatcattcaaatttcgaaggattgtttaatcaattggattttaatggattttgt----------agtgtaattttaacaagaaaaagtctttc 40013738  T
Q  198 atgaaaacatgatatttcttaagattg 224  Q
    ||||||| |||| ||||||| ||||||    
T  40013737 atgaaaagatgagatttcttgagattg 40013711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 54 - 147
Target Start/End: Original strand, 37013951 - 37014044
Alignment:
Q  54 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttg 147  Q
    ||||||||||||||||| || |||||||       |||| | |||||||||||||||||||||||||||   |||||||||||||  |||||||    
T  37013951 ggtattcaatcaagacttttcatcacttaaaaaaagtcttgcggtattcaaaatcattcaaatttcgaagggttgtttaataaattggattttg 37014044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 51 - 81
Target Start/End: Complemental strand, 16894074 - 16894044
Alignment:
Q  51 tgtggtattcaatcaagactcttaatcactt 81  Q
    |||||||||||||||||||||||||||||||    
T  16894074 tgtggtattcaatcaagactcttaatcactt 16894044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 160 - 224
Target Start/End: Original strand, 37014037 - 37014101
Alignment:
Q  160 ggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaagattg 224  Q
    ||||||| ||||  ||||||| || ||||||||||||||| |||| |||| ||||||| ||||||    
T  37014037 ggattttgtagtataattttaacaagaaaaagtctttcataaaaagatgagatttcttgagattg 37014101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 136; Significance: 6e-71; HSPs: 62)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 23 - 224
Target Start/End: Original strand, 20498214 - 20498415
Alignment:
Q  23 aagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaa 122  Q
    |||||||||||||||||       ||| |||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||    
T  20498214 aagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaa 20498313  T
Q  123 ttattgtttaataaatcagattttgatggcttttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaagat 222  Q
      ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||    
T  20498314 ggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggat 20498413  T
Q  223 tg 224  Q
    ||    
T  20498414 tg 20498415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 51 - 224
Target Start/End: Complemental strand, 10139319 - 10139146
Alignment:
Q  51 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatg 150  Q
    |||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  10139319 tgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatg 10139220  T
Q  151 gcttttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaagattg 224  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||    
T  10139219 gattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattg 10139146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 23 - 224
Target Start/End: Original strand, 19253832 - 19254033
Alignment:
Q  23 aagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaa 122  Q
    |||||||||||||||||       ||| |||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||    
T  19253832 aagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaa 19253931  T
Q  123 ttattgtttaataaatcagattttgatggcttttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaagat 222  Q
      |||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||    
T  19253932 ggattgtttaataaataagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggat 19254031  T
Q  223 tg 224  Q
    ||    
T  19254032 tg 19254033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 51 - 224
Target Start/End: Complemental strand, 996259 - 996086
Alignment:
Q  51 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatg 150  Q
    |||||||||||||||||| ||||||||||||       ||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  996259 tgtggtattcaatcaagattcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatg 996160  T
Q  151 gcttttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaagattg 224  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||    
T  996159 gattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattg 996086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 51 - 224
Target Start/End: Complemental strand, 3206378 - 3206205
Alignment:
Q  51 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatg 150  Q
    |||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  3206378 tgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatg 3206279  T
Q  151 gcttttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaagattg 224  Q
    | ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||| |||||    
T  3206278 gattttgtgggattttctagtgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttatgattg 3206205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 23 - 224
Target Start/End: Complemental strand, 33808000 - 33807798
Alignment:
Q  23 aagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnn-gtctagtggtattcaaaatcattcaaatttcga 121  Q
    |||||||||||||||||       ||| |||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||    
T  33808000 aagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaagtctagtggtattcaaaatcattcaaatttcga 33807901  T
Q  122 attattgtttaataaatcagattttgatggcttttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaaga 221  Q
    |  ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||    
T  33807900 aggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttagga 33807801  T
Q  222 ttg 224  Q
    |||    
T  33807800 ttg 33807798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 51 - 224
Target Start/End: Original strand, 6589597 - 6589770
Alignment:
Q  51 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatg 150  Q
    |||||||||||||||||||||||||||| ||       ||||||||||||||||||||||||||||||||||  ||| ||||||||||||||||||||||    
T  6589597 tgtggtattcaatcaagactcttaatcatttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaagaattatttaataaatcagattttgatg 6589696  T
Q  151 gcttttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaagattg 224  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||    
T  6589697 gattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattg 6589770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 51 - 224
Target Start/End: Complemental strand, 37820650 - 37820477
Alignment:
Q  51 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatg 150  Q
    |||||||||||||||||| ||||||||||||       ||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  37820650 tgtggtattcaatcaagattcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatg 37820551  T
Q  151 gcttttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaagattg 224  Q
    | ||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||    
T  37820550 gattttgtgggattttccagtgaaattttagcatgaaaaagtctttcataaaaacatgagatttcttaagattg 37820477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 55 - 224
Target Start/End: Original strand, 54625629 - 54625798
Alignment:
Q  55 gtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatggctt 154  Q
    |||||||||||||||||||||||||||       ||||||||||||||||||| ||||||||||||||  ||||||||||||||||||||||||||| ||    
T  54625629 gtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaattattcaaatttcgaaggattgtttaataaatcagattttgatggatt 54625728  T
Q  155 ttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaagattg 224  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||    
T  54625729 ttgtgggattttctagtgaaattttagcatgaaaaagtttttcatgaaaacatgagatttcttaagattg 54625798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 124; E-Value: 8e-64
Query Start/End: Original strand, 23 - 224
Target Start/End: Complemental strand, 3999846 - 3999645
Alignment:
Q  23 aagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaa 122  Q
    |||||||||||||||||       ||| |||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||    
T  3999846 aagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaatctagtggtattcaaaatcattcaaatttcgaa 3999747  T
Q  123 ttattgtttaataaatcagattttgatggcttttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaagat 222  Q
      ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| |||||||| |||    
T  3999746 ggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagaatgaaaaagtctttcataaaaacatgagatttcttaggat 3999647  T
Q  223 tg 224  Q
    ||    
T  3999646 tg 3999645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 23 - 224
Target Start/End: Complemental strand, 44762238 - 44762037
Alignment:
Q  23 aagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaa 122  Q
    |||||||||||||||||       ||||||| |||||||||||||||||||||||||||       ||||||||||||| ||||| |||||| |||||||    
T  44762238 aagattctttgtcatttaaaaaaagtcatgtagtattcaatcaagactcttaatcacttaaaaaaagtctagtggtatttaaaattattcaagtttcgaa 44762139  T
Q  123 ttattgtttaataaatcagattttgatggcttttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaagat 222  Q
      ||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||| |||||||||||| ||||||||||||    
T  44762138 ggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttcttaagat 44762039  T
Q  223 tg 224  Q
    ||    
T  44762038 tg 44762037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 51 - 224
Target Start/End: Complemental strand, 29449031 - 29448858
Alignment:
Q  51 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatg 150  Q
    |||| ||||||||||||||||| ||||||||       ||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  29449031 tgtgatattcaatcaagactctcaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatg 29448932  T
Q  151 gcttttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaagattg 224  Q
    | ||||||||||||||||||| |||||||||||| |||||||||||||||||||||||| |||||||| |||||    
T  29448931 gattttgtgggattttctagtaaaattttagcataaaaaagtctttcatgaaaacatgagatttcttaggattg 29448858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 23 - 218
Target Start/End: Complemental strand, 33996742 - 33996547
Alignment:
Q  23 aagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaa 122  Q
    |||||||||||||||||       ||| |||||||||||||||||||||||||||||||        || ||||||||||||||||||||||||||||||    
T  33996742 aagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaatccagtggtattcaaaatcattcaaatttcgaa 33996643  T
Q  123 ttattgtttaataaatcagattttgatggcttttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttctta 218  Q
      ||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| || ||||||||| ||||||||    
T  33996642 ggattgtttaataaatcagattttgatggattttgagggattttctagtgaaattttagcatgaaaaagtcttttataaaaacatgagatttctta 33996547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 51 - 224
Target Start/End: Original strand, 40246877 - 40247050
Alignment:
Q  51 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatg 150  Q
    |||||||||||||||||||| ||||||| ||       |||||||||||||||||||||||||||||| |||  ||||||||||||||||||||||||||    
T  40246877 tgtggtattcaatcaagactattaatcagttaaaaaaagtctagtggtattcaaaatcattcaaatttggaaggattgtttaataaatcagattttgatg 40246976  T
Q  151 gcttttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaagattg 224  Q
    | ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| |||| |||||    
T  40246977 gattttgtgggattttctagtgaaattttggcatgaaaaagtctttcatgaaaacatgagattccttatgattg 40247050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 51 - 214
Target Start/End: Original strand, 35337768 - 35337930
Alignment:
Q  51 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatg 150  Q
    |||||||||||||||||||||||||||||||       ||||||||||||||||||  ||||||||||||||  ||||||||||||||||||||||||||    
T  35337768 tgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaaaaattcaaatttcgaaggattgtttaataaatcagattttgatg 35337867  T
Q  151 gcttttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatattt 214  Q
    | |||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||    
T  35337868 gattttgtgggattttctagtgaaattttagcatgaaaaagt-tttcatgaaaacatgagattt 35337930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 23 - 224
Target Start/End: Complemental strand, 53929329 - 53929128
Alignment:
Q  23 aagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaa 122  Q
    |||||||||||||||||       ||| |||||||||||||||||||||||||||||||       ||||||||||||||||||||||| |||| |||||    
T  53929329 aagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcatttaaatatcgaa 53929230  T
Q  123 ttattgtttaataaatcagattttgatggcttttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaagat 222  Q
      |||||||||||||| |||||||||||| |||||| ||||||||||||||||||||||||||||||| ||||| |||||||||||| |||| ||| |||    
T  53929229 cgattgtttaataaataagattttgatggattttgtaggattttctagtgaaattttagcatgaaaaaatctttaatgaaaacatgagattttttaggat 53929130  T
Q  223 tg 224  Q
    ||    
T  53929129 tg 53929128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 23 - 224
Target Start/End: Original strand, 25418371 - 25418572
Alignment:
Q  23 aagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaa 122  Q
    |||||||||||||||||       ||| |||||||||||||||||||| ||||||||||        ||||| |||||||||||||||||||||||  ||    
T  25418371 aagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagacttttaatcacttacaaaaaatctagcggtattcaaaatcattcaaatttgaaa 25418470  T
Q  123 ttattgtttaataaatcagattttgatggcttttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaagat 222  Q
      ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||| |||||||||||||||| ||| |||| |||    
T  25418471 ggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttggcatgaaaaagtatttcatgaaaacatgagattccttaggat 25418570  T
Q  223 tg 224  Q
    ||    
T  25418571 tg 25418572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 54 - 224
Target Start/End: Complemental strand, 6035223 - 6035053
Alignment:
Q  54 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatggct 153  Q
    ||||||||||||||| | || |||||||       |||| ||| |||||||||||||||||||||||||  | |||||||||||| |||||||||||| |    
T  6035223 ggtattcaatcaagatttttcatcacttaaaaaaagtctcgtgatattcaaaatcattcaaatttcgaagcaatgtttaataaattagattttgatggat 6035124  T
Q  154 tttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaagattg 224  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| ||||||||| ||||||||||||||    
T  6035123 tttgtgggattttctagtaaaattttagcatgaaaaagtctttcataaaaacatgagatttcttaagattg 6035053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 51 - 209
Target Start/End: Complemental strand, 51699652 - 51699495
Alignment:
Q  51 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatg 150  Q
    |||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||  |||| ||||||||| |||||||||||    
T  51699652 tgtggtattcaatcaagactcttaatcacttaaaaaaa-tctagtggtattcaaaatcattcaaatttcgaaggattggttaataaataagattttgatg 51699554  T
Q  151 gcttttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatga 209  Q
      |||||||||||||||||||||||||||||||||||||| |||||| |||||||||||    
T  51699553 aattttgtgggattttctagtgaaattttagcatgaaaaaatctttcgtgaaaacatga 51699495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 23 - 223
Target Start/End: Original strand, 52114533 - 52114734
Alignment:
Q  23 aagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnn-gtctagtggtattcaaaatcattcaaatttcga 121  Q
    |||||||||||||||||       ||| |||||||||||||||||||| ||||||||||        ||||||||||||||||||| ||||||||||||     
T  52114533 aagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagacttttaatcacttaaaaaaaagtctagtggtattcaaaataattcaaatttcgc 52114632  T
Q  122 attattgtttaataaatcagattttgatggcttttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaaga 221  Q
    |  ||||||||||||||||||||||||| | |||||||| |||||||||| |||||||||||||||||| |||||  ||||||||||| |||||||| ||    
T  52114633 aggattgtttaataaatcagattttgatagattttgtggaattttctagtaaaattttagcatgaaaaaatcttttgtgaaaacatgagatttcttagga 52114732  T
Q  222 tt 223  Q
    ||    
T  52114733 tt 52114734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 23 - 224
Target Start/End: Original strand, 17946293 - 17946494
Alignment:
Q  23 aagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaa 122  Q
    |||||||||||||||||       ||| || ||||||||||||||||| || |||||||       |||| ||| |||||||||||||||||||||| ||    
T  17946293 aagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtctcgtgatattcaaaatcattcaaatttcaaa 17946392  T
Q  123 ttattgtttaataaatcagattttgatggcttttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaagat 222  Q
      ||||||||||||||  ||||||||||| |||||||||||||| ||||| ||||||| || |||||||||||||||||||| |||| ||||||| ||||    
T  17946393 ggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagat 17946492  T
Q  223 tg 224  Q
    ||    
T  17946493 tg 17946494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 89 - 224
Target Start/End: Original strand, 18749683 - 18749818
Alignment:
Q  89 gtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatggcttttgtgggattttctagtgaaattttagcatgaaa 188  Q
    |||| |||||||||||||||||||||||||||||  ||||||||||||||  ||||||||||| |||||||||||||| ||||| ||||||| || ||||    
T  18749683 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 18749782  T
Q  189 aagtctttcatgaaaacatgatatttcttaagattg 224  Q
    |||||||||||||||| |||| ||||||| ||||||    
T  18749783 aagtctttcatgaaaagatgagatttcttgagattg 18749818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 54 - 217
Target Start/End: Original strand, 40897180 - 40897343
Alignment:
Q  54 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatggct 153  Q
    ||||||||||||||||| || |||||||       ||||  ||||||||||||||||||||||||||||  ||||||||||||||  ||||||||||| |    
T  40897180 ggtattcaatcaagacttttcatcacttaaaaaaagtcttatggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggat 40897279  T
Q  154 tttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttctt 217  Q
    ||||||||||||| ||||| ||||||| || |||||||||||||||||||| |||| |||||||    
T  40897280 tttgtgggattttatagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 40897343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 95 - 224
Target Start/End: Original strand, 5825139 - 5825268
Alignment:
Q  95 tggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatggcttttgtgggattttctagtgaaattttagcatgaaaaagtct 194  Q
    |||||||||||||||||||||||| |||  ||||||||||||||  ||||||||| | |||||||||||||| |||||||||| ||||||||||||| ||    
T  5825139 tggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttgatagattttgtgggattttttagtgaaattctagcatgaaaaaggct 5825238  T
Q  195 ttcatgaaaacatgatatttcttaagattg 224  Q
    ||||||||||||||| |||||||| |||||    
T  5825239 ttcatgaaaacatgagatttcttatgattg 5825268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 51 - 189
Target Start/End: Original strand, 22057795 - 22057933
Alignment:
Q  51 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatg 150  Q
    |||||||||| |||||||||||| |||||||        |||||||||||| |||||||||||||||||||   ||||||||||||||||||||||||||    
T  22057795 tgtggtattccatcaagactcttgatcacttaaaaaaaatctagtggtatttaaaatcattcaaatttcgatggattgtttaataaatcagattttgatg 22057894  T
Q  151 gcttttgtgggattttctagtgaaattttagcatgaaaa 189  Q
    | |||||||||||||||||||||||||||| ||||||||    
T  22057895 gattttgtgggattttctagtgaaattttaacatgaaaa 22057933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 47 - 224
Target Start/End: Original strand, 27899373 - 27899540
Alignment:
Q  47 gtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagatttt 146  Q
    ||||| |||||||||||||||||||||  ||| ||       |||| |||||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  27899373 gtcatatggtattcaatcaagactctttgtcatttaaaaaaagtctggtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttt 27899472  T
Q  147 gatggcttttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaagattg 224  Q
    |          | |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||    
T  27899473 g----------taggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgaaatttcttatgattg 27899540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 54 - 224
Target Start/End: Complemental strand, 36674300 - 36674130
Alignment:
Q  54 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatggct 153  Q
    ||||||||||||||||| || |||| ||       |||| ||||||||||||||||||||||||| |||  ||||||||||||||  ||||||||||| |    
T  36674300 ggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttgatggat 36674201  T
Q  154 tttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaagattg 224  Q
    ||||||||||||| ||||| ||||||| || |||||||||||||||||||| |||| ||||||| ||||||    
T  36674200 tttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattg 36674130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 54 - 224
Target Start/End: Complemental strand, 44906683 - 44906513
Alignment:
Q  54 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatggct 153  Q
    ||||||||||||||||| || |||||||       |||| |||||||||||||||||||||||||||||  ||||||||||||||  ||||||||||  |    
T  44906683 ggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaat 44906584  T
Q  154 tttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaagattg 224  Q
    ||||||||||||| ||||| ||||||| || ||||| |||||||||||||| |||| ||||||| ||||||    
T  44906583 tttgtgggattttgtagtgtaattttaacaagaaaatgtctttcatgaaaagatgagatttcttgagattg 44906513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 51 - 216
Target Start/End: Original strand, 29030039 - 29030203
Alignment:
Q  51 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatg 150  Q
    |||||||||||||||||||||||||||||||       |||| ||||||||||||||||||||||||| |||  ||||||||||||||||||||||||||    
T  29030039 tgtggtattcaatcaagactcttaatcacttaaaaaa-gtcttgtggtattcaaaatcattcaaattttgaaggattgtttaataaatcagattttgatg 29030137  T
Q  151 gcttttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttct 216  Q
    | |||||||| |||||||| |||||||||| ||||||    | ||| |||||||||||| ||||||    
T  29030138 gattttgtggaattttctaatgaaattttaacatgaattttttttttatgaaaacatgagatttct 29030203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 89 - 224
Target Start/End: Original strand, 32580247 - 32580382
Alignment:
Q  89 gtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatggcttttgtgggattttctagtgaaattttagcatgaaa 188  Q
    |||| |||||||||||||||||||||||||||||  ||||||||||||||  ||||||||||| ||||| |||||||| ||||| ||||||| || ||||    
T  32580247 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgagggattttgtagtgtaattttaacaagaaa 32580346  T
Q  189 aagtctttcatgaaaacatgatatttcttaagattg 224  Q
    |||||||||||||||| |||| ||||||| ||||||    
T  32580347 aagtctttcatgaaaagatgagatttcttgagattg 32580382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 51 - 170
Target Start/End: Complemental strand, 1440125 - 1440006
Alignment:
Q  51 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatg 150  Q
    |||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||| ||  ||||||||||||||||||||||||||    
T  1440125 tgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttccaaggattgtttaataaatcagattttgatg 1440026  T
Q  151 gcttttgtgggattttctag 170  Q
    | |||| |||||||||||||    
T  1440025 gattttatgggattttctag 1440006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 94 - 224
Target Start/End: Complemental strand, 34484160 - 34484030
Alignment:
Q  94 gtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatggcttttgtgggattttctagtgaaattttagcatgaaaaagtc 193  Q
    |||||||||||||||||||||||||||||  ||||||||||||||  ||||||||||| |||||||||||||| ||||| ||||||| || |||||| ||    
T  34484160 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaaatc 34484061  T
Q  194 tttcatgaaaacatgatatttcttaagattg 224  Q
    ||||||||||| |||| ||||||| ||||||    
T  34484060 tttcatgaaaagatgagatttcttgagattg 34484030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 54 - 224
Target Start/End: Original strand, 11431562 - 11431732
Alignment:
Q  54 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatggct 153  Q
    ||||||||||||||||| || |||| ||       |||| |||||||||||||||||| ||||||||||  ||||||||||||||  ||||||| ||| |    
T  11431562 ggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcatttaaatttcgaaggattgtttaataaattggattttggtggat 11431661  T
Q  154 tttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaagattg 224  Q
    ||||||||||||| ||||| ||||||| || |||||||||||||||||||| |||| ||||||| ||||||    
T  11431662 tttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattg 11431732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 136 - 224
Target Start/End: Complemental strand, 6131321 - 6131233
Alignment:
Q  136 aatcagattttgatggcttttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaagattg 224  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||    
T  6131321 aatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattg 6131233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 23 - 224
Target Start/End: Original strand, 26107266 - 26107467
Alignment:
Q  23 aagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaa 122  Q
    |||||||||||||||||       ||| || ||||||||||||||||| || |||| ||       |||| |||||||||||||||||||||||||||||    
T  26107266 aagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcaattaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaa 26107365  T
Q  123 ttattgtttaataaatcagattttgatggcttttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaagat 222  Q
      ||||||||||||||  ||||||||||| ||||||| |||||| ||||| ||||||| || |||||||| |||||| |||| |||| ||||||| ||||    
T  26107366 ggattgtttaataaattggattttgatggattttgtgtgattttgtagtgtaattttaacaagaaaaagtatttcataaaaagatgagatttcttgagat 26107465  T
Q  223 tg 224  Q
    ||    
T  26107466 tg 26107467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 94 - 224
Target Start/End: Original strand, 54628920 - 54629050
Alignment:
Q  94 gtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatggcttttgtgggattttctagtgaaattttagcatgaaaaagtc 193  Q
    |||||||||||||||||||||||||| ||  ||||||||||||||  ||||||||||| |||||||||||||| ||||| ||||||| || |||||||||    
T  54628920 gtggtattcaaaatcattcaaatttcaaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtc 54629019  T
Q  194 tttcatgaaaacatgatatttcttaagattg 224  Q
    |||||| |||| |||| ||||||| ||||||    
T  54629020 tttcataaaaagatgagatttcttgagattg 54629050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 54 - 204
Target Start/End: Complemental strand, 51737896 - 51737746
Alignment:
Q  54 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatggct 153  Q
    ||||||||||||||||| || |||||||       |||| |||||||||||||||||||||||||||||  ||||||||||||||  ||||||||||| |    
T  51737896 ggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggat 51737797  T
Q  154 tttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaa 204  Q
    ||||||||||||| | ||| ||||||| || ||||||||||||||| ||||    
T  51737796 tttgtgggattttgttgtgtaattttaacaagaaaaagtctttcataaaaa 51737746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 54 - 224
Target Start/End: Original strand, 52810414 - 52810584
Alignment:
Q  54 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatggct 153  Q
    ||||||||||||||||| || |||| ||       |||| ||||||||||||||||||||||||| |||| ||||||||||||||   |||||||||| |    
T  52810414 ggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaattttgaatgattgtttaataaattgaattttgatggat 52810513  T
Q  154 tttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaagattg 224  Q
    ||||||||||||| ||| | ||||||| || |||||| ||||||||||||| |||| ||||||| ||||||    
T  52810514 tttgtgggattttgtagcgtaattttaacaagaaaaaatctttcatgaaaagatgagatttcttgagattg 52810584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 94 - 224
Target Start/End: Complemental strand, 31646414 - 31646286
Alignment:
Q  94 gtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatggcttttgtgggattttctagtgaaattttagcatgaaaaagtc 193  Q
    |||||||||||||||||||||||||||||  |||||||||| |||  ||||||||||| |||||||||||||| ||||| ||||||| || |||||||||    
T  31646414 gtggtattcaaaatcattcaaatttcgaaagattgtttaatgaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtc 31646315  T
Q  194 tttcatgaaaacatgatatttcttaagattg 224  Q
    ||||||||||  |||| ||||||| ||||||    
T  31646314 tttcatgaaa--atgagatttcttgagattg 31646286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 54 - 224
Target Start/End: Original strand, 48379193 - 48379363
Alignment:
Q  54 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatggct 153  Q
    ||||||||||| ||||| || |||||||       |||| |||||||||||||||||||||||||||||  ||||||||||||||   |||||||||| |    
T  48379193 ggtattcaatctagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgaattttgatggat 48379292  T
Q  154 tttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaagattg 224  Q
    ||||||||||||| ||||| |||||||  | ||||| |||||||||||||| || | ||||||| ||||||    
T  48379293 tttgtgggattttgtagtgtaattttaataagaaaatgtctttcatgaaaagatcagatttcttgagattg 48379363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 89 - 224
Target Start/End: Complemental strand, 50903375 - 50903240
Alignment:
Q  89 gtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatggcttttgtgggattttctagtgaaattttagcatgaaa 188  Q
    |||| ||||||||||||||||||||||||  |||  ||||||||||||||  ||||||||||| |||||||||||||| ||||| ||||||| || ||||    
T  50903375 gtcttgtggtattcaaaatcattcaaattaagaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 50903276  T
Q  189 aagtctttcatgaaaacatgatatttcttaagattg 224  Q
    || ||||| ||||||| |||| ||||||| ||||||    
T  50903275 aaatcttttatgaaaatatgagatttcttgagattg 50903240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 54 - 224
Target Start/End: Complemental strand, 52618135 - 52617971
Alignment:
Q  54 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatggct 153  Q
    ||||||||||||||||| || |||||||       |||| |||||||||||||||||||||||||||||  ||||||||||||||  ||||||||||| |    
T  52618135 ggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggat 52618036  T
Q  154 tttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaagattg 224  Q
    ||||||||||||| ||||| ||||||      || ||||||||||| |||| |||| ||||||| ||||||    
T  52618035 tttgtgggattttgtagtgtaatttt------aacaagtctttcataaaaagatgagatttcttgagattg 52617971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 125 - 224
Target Start/End: Complemental strand, 1439993 - 1439894
Alignment:
Q  125 attgtttaataaatcagattttgatggcttttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaagattg 224  Q
    |||||||||||||| |||||||||| | ||||||||||||||||||| ||||||| | |||||||||||||||| |||||||||| |||| ||| |||||    
T  1439993 attgtttaataaattagattttgatagattttgtgggattttctagtaaaattttggtatgaaaaagtctttcacgaaaacatgagattttttaggattg 1439894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 54 - 204
Target Start/End: Original strand, 20833028 - 20833178
Alignment:
Q  54 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatggct 153  Q
    ||||||||||||||| | || |||||||       |||| ||||||||||||||||||||||||  |||  ||||||||||||||  ||||||||||| |    
T  20833028 ggtattcaatcaagaattttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaattcggaaggattgtttaataaattggattttgatggat 20833127  T
Q  154 tttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaa 204  Q
    |||||| |||||  ||||| ||||||| || |||||||| |||||||||||    
T  20833128 tttgtgagatttattagtgtaattttaacaagaaaaagtatttcatgaaaa 20833178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 98 - 192
Target Start/End: Original strand, 55235264 - 55235359
Alignment:
Q  98 tattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatgg-cttttgtgggattttctagtgaaattttagcatgaaaaagt 192  Q
    |||||||||||||||||||||||||  ||||||||||||||  | |||||||||  ||||||||||||||||| |||||||||||||| |||||||    
T  55235264 tattcaaaatcattcaaatttcgaaagattgtttaataaattggtttttgatggatttttgtgggattttctaatgaaattttagcataaaaaagt 55235359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 90 - 250
Target Start/End: Original strand, 52079999 - 52080143
Alignment:
Q  90 tctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatggcttttgtgggattttctagtgaaattttagcatgaaaa 189  Q
    ||||||||||||||||||||||||||||| |||  ||||||||||||||||||          ||||||||||||||||| |||||||||||||||||||    
T  52079999 tctagtggtattcaaaatcattcaaattttgaaggattgtttaataaatcaga----------ttttgtgggattttctaatgaaattttagcatgaaaa 52080088  T
Q  190 agtctttcatgaaaacatgatatttcttaagattgnnnnnnnncttttaagattttactat 250  Q
    |||      ||||||||||| |||||||| |||||        ||||||||||||||||||    
T  52080089 agt------tgaaaacatgagatttcttaggattgttttttttcttttaagattttactat 52080143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 89 - 224
Target Start/End: Original strand, 37454932 - 37455057
Alignment:
Q  89 gtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatggcttttgtgggattttctagtgaaattttagcatgaaa 188  Q
    |||| |||||||||||||||||||||||||||||| ||||||||||||||          ||  |||||||||||||| ||||| ||||||| || ||||    
T  37454932 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaat----------tgaattttgtgggattttgtagtgtaattttaacaagaaa 37455021  T
Q  189 aagtctttcatgaaaacatgatatttcttaagattg 224  Q
    |||| ||||||||||| |||| ||||||| ||||||    
T  37455022 aagtatttcatgaaaagatgagatttcttgagattg 37455057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 54 - 224
Target Start/End: Complemental strand, 10728811 - 10728651
Alignment:
Q  54 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatggct 153  Q
    ||||||||||||||||| || |||||||       |||| |||||||| |||||||||||||||| |||  ||||||||||||||  |||||||||        
T  10728811 ggtattcaatcaagacttttcatcacttacaaaaagtcttgtggtatttaaaatcattcaaatttggaaggattgtttaataaattggattttgat---- 10728716  T
Q  154 tttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaagattg 224  Q
          ||||||| ||||| ||||||| || |||||||||||||||||||| |||| ||||||| ||||||    
T  10728715 ------ggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattg 10728651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 89 - 224
Target Start/End: Complemental strand, 50762185 - 50762060
Alignment:
Q  89 gtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatggcttttgtgggattttctagtgaaattttagcatgaaa 188  Q
    |||| ||||||||||||||||||| |||||||||| ||||||| ||||||  |||||||||          ||||||| ||||| ||||||| || ||||    
T  50762185 gtcttgtggtattcaaaatcattctaatttcgaatgattgtttgataaattggattttgat----------ggattttgtagtgtaattttaacaagaaa 50762096  T
Q  189 aagtctttcatgaaaacatgatatttcttaagattg 224  Q
    |||||||||||||||| |||| ||||||| ||||||    
T  50762095 aagtctttcatgaaaagatgagatttcttgagattg 50762060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 54 - 217
Target Start/End: Original strand, 39038076 - 39038229
Alignment:
Q  54 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatggct 153  Q
    ||||||||||||||||| || |||||||       |||| ||||||| |||||||||||||||||||||  ||||||||||||||  ||||||||||| |    
T  39038076 ggtattcaatcaagacttttcatcactttaaaaaagtcttgtggtatccaaaatcattcaaatttcgaagaattgtttaataaattggattttgatggat 39038175  T
Q  154 tttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttctt 217  Q
    |||||          |||| ||||||| || ||||||||||||||| |||| |||| |||||||    
T  39038176 tttgt----------agtgtaattttaacaagaaaaagtctttcataaaaagatgagatttctt 39038229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 171 - 224
Target Start/End: Complemental strand, 33807733 - 33807680
Alignment:
Q  171 tgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaagattg 224  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||| |||||    
T  33807733 tgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattg 33807680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 94 - 158
Target Start/End: Original strand, 10660611 - 10660675
Alignment:
Q  94 gtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatggcttttgt 158  Q
    |||||||||||||||||||||||||||||  ||||||||||||||  ||||||||||| ||||||    
T  10660611 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgt 10660675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 89 - 206
Target Start/End: Original strand, 6975817 - 6975924
Alignment:
Q  89 gtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatggcttttgtgggattttctagtgaaattttagcatgaaa 188  Q
    |||| |||||||||||||||||||||||||||||  ||| |||| |||||          |||  |||||||||||||||||| |||||| |||||||||    
T  6975817 gtcttgtggtattcaaaatcattcaaatttcgaagaattatttactaaat----------tggaatttgtgggattttctagtaaaatttgagcatgaaa 6975906  T
Q  189 aagtctttcatgaaaaca 206  Q
     |||||||||||||||||    
T  6975907 cagtctttcatgaaaaca 6975924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 23 - 147
Target Start/End: Complemental strand, 23753587 - 23753463
Alignment:
Q  23 aagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaa 122  Q
    |||||||||||||||||       ||| || ||||||||||||||||| || |||| ||       |||| |||||||||||||||||||||||||||||    
T  23753587 aagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaa 23753488  T
Q  123 ttattgtttaataaatcagattttg 147  Q
      ||||||||||||||  |||||||    
T  23753487 ggattgtttaataaattggattttg 23753463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 89 - 158
Target Start/End: Complemental strand, 39842619 - 39842550
Alignment:
Q  89 gtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatggcttttgt 158  Q
    |||| ||| |||||||||||||||||||||||||  |||||||||||||| ||||||||| || ||||||    
T  39842619 gtctcgtgatattcaaaatcattcaaatttcgaagaattgtttaataaattagattttgacggattttgt 39842550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 153 - 214
Target Start/End: Original strand, 44276510 - 44276571
Alignment:
Q  153 ttttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatattt 214  Q
    |||||||||||||||||||||||||||| || |||||| ||||||||||| |||||| ||||    
T  44276510 ttttgtgggattttctagtgaaattttaacaagaaaaaatctttcatgaagacatgagattt 44276571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 89 - 151
Target Start/End: Complemental strand, 539539 - 539477
Alignment:
Q  89 gtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatgg 151  Q
    |||| |||||||||||||||||||||||||||||  ||| ||||||||||  |||||||||||    
T  539539 gtcttgtggtattcaaaatcattcaaatttcgaaggattatttaataaattggattttgatgg 539477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 160 - 224
Target Start/End: Original strand, 45862983 - 45863047
Alignment:
Q  160 ggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaagattg 224  Q
    ||||||| ||||| ||||||| || |||||||||||||||||||| |||| ||||||| ||||||    
T  45862983 ggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattg 45863047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 153 - 224
Target Start/End: Complemental strand, 15492938 - 15492867
Alignment:
Q  153 ttttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaagattg 224  Q
    |||||| |||| |||||||||||||||| || |||||| |||||||||||  ||| | ||||||| ||||||    
T  15492938 ttttgtaggatattctagtgaaattttaacaagaaaaaatctttcatgaagtcataagatttcttgagattg 15492867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 161 - 207
Target Start/End: Original strand, 12103733 - 12103779
Alignment:
Q  161 gattttctagtgaaattttagcatgaaaaagtctttcatgaaaacat 207  Q
    |||||||||||||||||||| || ||| |||||||||||||| ||||    
T  12103733 gattttctagtgaaattttaacaagaataagtctttcatgaagacat 12103779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 145
Target Start/End: Complemental strand, 23535983 - 23535890
Alignment:
Q  51 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattt 145  Q
    ||||| |||||||||| |||||| |||||||       |||| ||||||||||||||||||||||||| |||  || ||||||| ||| ||||||    
T  23535983 tgtggcattcaatcaa-actcttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttagaaggatcgtttaattaattagattt 23535890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 160 - 224
Target Start/End: Complemental strand, 23753470 - 23753407
Alignment:
Q  160 ggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaagattg 224  Q
    ||||||| ||||| ||||||| || |||||||||||||||| ||| |||| ||||||| ||||||    
T  23753470 ggattttgtagtgtaattttaacaagaaaaagtctttcatg-aaagatgagatttcttgagattg 23753407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 136; Significance: 6e-71; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 23 - 224
Target Start/End: Original strand, 24776362 - 24776563
Alignment:
Q  23 aagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaa 122  Q
    |||||||||||||||||       ||| |||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||    
T  24776362 aagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaa 24776461  T
Q  123 ttattgtttaataaatcagattttgatggcttttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaagat 222  Q
      ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||    
T  24776462 ggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggat 24776561  T
Q  223 tg 224  Q
    ||    
T  24776562 tg 24776563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 23 - 224
Target Start/End: Original strand, 16269698 - 16269899
Alignment:
Q  23 aagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaa 122  Q
    |||||||||||||||||       ||| |||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||    
T  16269698 aagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaa 16269797  T
Q  123 ttattgtttaataaatcagattttgatggcttttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaagat 222  Q
      ||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||| |||    
T  16269798 ggattgtttaataaatcagattttgatggattttgtgggattttatagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggat 16269897  T
Q  223 tg 224  Q
    ||    
T  16269898 tg 16269899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 23 - 224
Target Start/End: Original strand, 20605243 - 20605444
Alignment:
Q  23 aagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaa 122  Q
    |||||||||||||||||       ||| |||||||||||||||||||||||||||||||       ||||||||||||||||||||||| ||||||||||    
T  20605243 aagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattaaaatttcgaa 20605342  T
Q  123 ttattgtttaataaatcagattttgatggcttttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaagat 222  Q
      ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||    
T  20605343 ggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggat 20605442  T
Q  223 tg 224  Q
    ||    
T  20605443 tg 20605444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 23 - 224
Target Start/End: Complemental strand, 31170827 - 31170626
Alignment:
Q  23 aagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaa 122  Q
    |||||||||||||||||       ||| |||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||| ||    
T  31170827 aagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttccaa 31170728  T
Q  123 ttattgtttaataaatcagattttgatggcttttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaagat 222  Q
      ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||    
T  31170727 ggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggat 31170628  T
Q  223 tg 224  Q
    ||    
T  31170627 tg 31170626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 23 - 224
Target Start/End: Original strand, 12407387 - 12407588
Alignment:
Q  23 aagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaa 122  Q
    |||||||||||||||||       ||| |||||||||||||| ||||||||||||||||       |||||||||||||||||||||||||||||| |||    
T  12407387 aagattctttgtcatttaaaaaaagtcttgtggtattcaatcgagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaattttgaa 12407486  T
Q  123 ttattgtttaataaatcagattttgatggcttttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaagat 222  Q
      ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||    
T  12407487 ggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttaccatgaaaaagtctttcatgaaaacatgagatttcttaagat 12407586  T
Q  223 tg 224  Q
    ||    
T  12407587 tg 12407588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 17 - 224
Target Start/End: Complemental strand, 14198785 - 14198579
Alignment:
Q  17 caatcaaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaat 116  Q
    |||||||| ||||||||||||||       ||| |||||||||||||||||||||||||||||||       ||| ||||||||||||||||||||||||    
T  14198785 caatcaaa-attctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtccagtggtattcaaaatcattcaaat 14198687  T
Q  117 ttcgaattattgtttaataaatcagattttgatggcttttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttct 216  Q
    ||||||  ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||    
T  14198686 ttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaattctttcatgaaaacatgagatttct 14198587  T
Q  217 taagattg 224  Q
    || |||||    
T  14198586 taggattg 14198579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 51 - 224
Target Start/End: Complemental strand, 305640 - 305467
Alignment:
Q  51 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatg 150  Q
    |||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| ||||    
T  305640 tgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaattttgaatgattgtttaataaatcagatttcgatg 305541  T
Q  151 gcttttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaagattg 224  Q
    | ||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||| |||||    
T  305540 gattttgtgagattttctagtgaaattttagaatgaaaaagtctttcatgaaaacatgagatttcttaggattg 305467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 56 - 224
Target Start/End: Original strand, 35317102 - 35317270
Alignment:
Q  56 tattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatggcttt 155  Q
    ||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||| |||    
T  35317102 tattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattt 35317201  T
Q  156 tgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaagattg 224  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| ||||    
T  35317202 tgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttcttaacattg 35317270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 23 - 224
Target Start/End: Original strand, 43847653 - 43847854
Alignment:
Q  23 aagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaa 122  Q
    |||||||||||||||||       ||| |||||||||||||||||||||||||||||||       ||||||| ||||||||||||||||||||||||||    
T  43847653 aagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagttgtattcaaaatcattcaaatttcgaa 43847752  T
Q  123 ttattgtttaataaatcagattttgatggcttttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaagat 222  Q
      |||||||||||||||||| |||||||| |||||||| ||||||||||||||||||||||||||||||||| |||||||||||||| |||||||| |||    
T  43847753 ggattgtttaataaatcagaatttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctgtcatgaaaacatgagatttcttaggat 43847852  T
Q  223 tg 224  Q
    ||    
T  43847853 tg 43847854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 23 - 224
Target Start/End: Complemental strand, 5093250 - 5093049
Alignment:
Q  23 aagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaa 122  Q
    |||||||||||||||||       ||| ||||||||||||||||||| |||||||||||       ||||||| |||||||||||||||||||||| |||    
T  5093250 aagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagacgcttaatcacttaaaaaaagtctagtagtattcaaaatcattcaaattttgaa 5093151  T
Q  123 ttattgtttaataaatcagattttgatggcttttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaagat 222  Q
      ||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| |||||||| |||    
T  5093150 ggattgtttaataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtctttcataaaaacatgagatttcttaggat 5093051  T
Q  223 tg 224  Q
    ||    
T  5093050 tg 5093049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 23 - 224
Target Start/End: Complemental strand, 22551966 - 22551765
Alignment:
Q  23 aagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaa 122  Q
    |||||||||||||||||       ||| |||||||||||||||||||| ||||||||||       ||||||||||||||||||| ||||||||||||||    
T  22551966 aagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagacttttaatcacttaaaaaaagtctagtggtattcaaaattattcaaatttcgaa 22551867  T
Q  123 ttattgtttaataaatcagattttgatggcttttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaagat 222  Q
    | |||||||| ||||| | |||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||| |||    
T  22551866 tgattgtttattaaattaaattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtatttcatgaaaacatgagatttcttatgat 22551767  T
Q  223 tg 224  Q
    ||    
T  22551766 tg 22551765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 17 - 219
Target Start/End: Original strand, 32125252 - 32125456
Alignment:
Q  17 caatcaaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaat---cacttnnnnnnngtctagtggtattcaaaatcattca 113  Q
    |||||||| ||||||||||||||       ||||||||||||||||||||||||||||||   || ||       ||| |||||||||||||||||||||    
T  32125252 caatcaaa-attctttgtcatttaaaaaaagtcatgtggtattcaatcaagactcttaatgatcatttaaaaaaagtcaagtggtattcaaaatcattca 32125350  T
Q  114 aatttcgaattattgtttaataaatcagattttgatggcttttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatt 213  Q
    |||||||||  ||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||| |||| |||    
T  32125351 aatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtaaaattttagcatgaaaaagtctttcatgaaaatatgagatt 32125450  T
Q  214 tcttaa 219  Q
    ||||||    
T  32125451 tcttaa 32125456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 56 - 204
Target Start/End: Original strand, 1789482 - 1789630
Alignment:
Q  56 tattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatggcttt 155  Q
    ||||||||||| ||||||||||||||       ||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||| |||    
T  1789482 tattcaatcaaaactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattt 1789581  T
Q  156 tgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaa 204  Q
    |||||||||||||| ||||||||||||||||||||||||||||| ||||    
T  1789582 tgtgggattttctaatgaaattttagcatgaaaaagtctttcatcaaaa 1789630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 23 - 184
Target Start/End: Original strand, 44765782 - 44765943
Alignment:
Q  23 aagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaa 122  Q
    |||||||||||||||||       ||| |||||||||||||| ||||||||||||||||       ||||||||||||||||||||||||||||||||||    
T  44765782 aagattctttgtcatttaaaaaaagtcttgtggtattcaatcgagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaa 44765881  T
Q  123 ttattgtttaataaatcagattttgatggcttttgtgggattttctagtgaaattttagcat 184  Q
      |||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||    
T  44765882 agattgtttaataaataagattttgatggattttgtgggattttctagtgaaattttagcat 44765943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 54 - 224
Target Start/End: Original strand, 10657444 - 10657614
Alignment:
Q  54 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatggct 153  Q
    ||||||||||||||||| || |||||||       |||| |||||||||||||||||||||||||||||| ||||||||||||||  ||||||||||| |    
T  10657444 ggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggat 10657543  T
Q  154 tttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaagattg 224  Q
    ||||||||||||| ||||| ||||||| || |||||||| ||||||||||| |||| ||||||| ||||||    
T  10657544 tttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagatgaaatttcttgagattg 10657614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 51 - 224
Target Start/End: Original strand, 9120161 - 9120334
Alignment:
Q  51 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatg 150  Q
    |||| ||||||||||||| ||||||||||||        ||||||| |||||||||||||||| ||||  ||  |||||||||||||| |||||||||||    
T  9120161 tgtgttattcaatcaagattcttaatcacttaaaaaaaatctagtgatattcaaaatcattcagattttaaaggattgtttaataaattagattttgatg 9120260  T
Q  151 gcttttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaagattg 224  Q
    | ||||||||||||||||||||||||||||| ||| |||| |||||||||||||||||| |||||||| |||||    
T  9120261 gattttgtgggattttctagtgaaattttagtatggaaaaatctttcatgaaaacatgagatttcttaggattg 9120334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 54 - 224
Target Start/End: Original strand, 28844593 - 28844763
Alignment:
Q  54 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatggct 153  Q
    ||||||||||||||||| || |||||||       |||| |||||||||||||||||||||||||||||  |||||||||||||| |||||||||||| |    
T  28844593 ggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattagattttgatggat 28844692  T
Q  154 tttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaagattg 224  Q
    ||||||| ||||| ||||| |||||||  | ||||||||||||||| |||| |||| ||||||| ||||||    
T  28844693 tttgtggaattttgtagtgtaattttaataagaaaaagtctttcataaaaagatgagatttcttgagattg 28844763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 54 - 224
Target Start/End: Original strand, 33135661 - 33135830
Alignment:
Q  54 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatggct 153  Q
    ||||||||||||||||| || |||||||       |||| |||||||||||||||||||||||||||||  ||||||||||||||  ||||||||||| |    
T  33135661 ggtattcaatcaagacttttcatcacttaaaaaaagtctcgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggat 33135760  T
Q  154 tttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaagattg 224  Q
    ||||||||||||| ||||| ||||||| || ||||||||||||||| |||| |||| ||||||| ||||||    
T  33135761 tttgtgggattttgtagtgtaattttaacaagaaaaagtctttcat-aaaaaatgagatttcttgagattg 33135830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 94 - 224
Target Start/End: Original strand, 18177345 - 18177475
Alignment:
Q  94 gtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatggcttttgtgggattttctagtgaaattttagcatgaaaaagtc 193  Q
    |||||||||||||||||||||||||||||  |||||||||| |||  ||||||||||| |||||||||||||| ||||| ||||||| || |||||||||    
T  18177345 gtggtattcaaaatcattcaaatttcgaaggattgtttaattaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtc 18177444  T
Q  194 tttcatgaaaacatgatatttcttaagattg 224  Q
    ||| || |||| |||| ||||||| ||||||    
T  18177445 tttaataaaaagatgagatttcttgagattg 18177475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 94 - 224
Target Start/End: Original strand, 25288237 - 25288367
Alignment:
Q  94 gtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatggcttttgtgggattttctagtgaaattttagcatgaaaaagtc 193  Q
    |||||||||||||||||||||||||||||  ||||||||||||||  ||||||||||  |||||||||||||| ||||| ||||||| || || || |||    
T  25288237 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgggattttgtagtgtaattttaacaagagaacgtc 25288336  T
Q  194 tttcatgaaaacatgatatttcttaagattg 224  Q
    ||||||||||| |||| ||||||| ||||||    
T  25288337 tttcatgaaaagatgagatttcttgagattg 25288367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 89 - 199
Target Start/End: Original strand, 26788859 - 26788969
Alignment:
Q  89 gtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatggcttttgtgggattttctagtgaaattttagcatgaaa 188  Q
    |||| ||||||||||||||||||||||||| |||  ||||||||||||||  ||||||||||| |||||||||||||| ||||| ||||||| || ||||    
T  26788859 gtcttgtggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 26788958  T
Q  189 aagtctttcat 199  Q
    |||||||||||    
T  26788959 aagtctttcat 26788969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 106 - 224
Target Start/End: Original strand, 43078653 - 43078771
Alignment:
Q  106 atcattcaaatttcgaattattgtttaataaatcagattttgatggcttttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaac 205  Q
    |||||||||||||||||| ||||||||||||||  |||||| |||| |||||||||||||| ||||| ||||||| |||||||||||||||||| ||||     
T  43078653 atcattcaaatttcgaatgattgtttaataaattggattttcatggattttgtgggattttatagtgtaattttaacatgaaaaagtctttcataaaaag 43078752  T
Q  206 atgatatttcttaagattg 224  Q
    || | ||||||| ||||||    
T  43078753 ataagatttcttgagattg 43078771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 55 - 147
Target Start/End: Complemental strand, 26601371 - 26601279
Alignment:
Q  55 gtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttg 147  Q
    |||||||||||||||||||||||||||       |||  ||||||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  26601371 gtattcaatcaagactcttaatcacttaaaaaaagtcacgtggtattcaaaatcattcaaatttcgaatgtttgtttaataaatcagattttg 26601279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 54 - 224
Target Start/End: Complemental strand, 28740455 - 28740295
Alignment:
Q  54 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatggct 153  Q
    ||||||||||||||||| || |||||||       |||| |||||||||||||||||||||||||||||  ||||||||||||||  ||||||||||| |    
T  28740455 ggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggat 28740356  T
Q  154 tttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaagattg 224  Q
    ||||||          ||| ||||||| || ||||||||||||||| |||| |||| ||||||| ||||||    
T  28740355 tttgtg----------gtgtaattttaacaagaaaaagtctttcataaaaagatgagatttcttgagattg 28740295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 56 - 224
Target Start/End: Complemental strand, 13833592 - 13833434
Alignment:
Q  56 tattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatggcttt 155  Q
    ||||||||||||||| || |||||||       ||||  |||||||||||||||||||||||| |||  ||||||||||||||          ||| |||    
T  13833592 tattcaatcaagacttttcatcacttaaaaaaagtcttctggtattcaaaatcattcaaattttgaaggattgtttaataaat----------tggattt 13833503  T
Q  156 tgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaagattg 224  Q
    ||||||||||| ||||| ||||||| || ||||||||||||||||| || |||| ||||||| ||||||    
T  13833502 tgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgacaagatgagatttcttgagattg 13833434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 54 - 158
Target Start/End: Original strand, 7026642 - 7026746
Alignment:
Q  54 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatggct 153  Q
    ||||||||||||||||| || |||| ||       |||| |||||||||||||||||||||||||||||  ||||||||||||||  ||||||||||| |    
T  7026642 ggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggat 7026741  T
Q  154 tttgt 158  Q
    |||||    
T  7026742 tttgt 7026746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 98 - 224
Target Start/End: Complemental strand, 10125418 - 10125302
Alignment:
Q  98 tattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatggcttttgtgggattttctagtgaaattttagcatgaaaaagtctttc 197  Q
    |||||||||||||||||||||| ||  ||||||||||||||          ||  |||||||||||||| ||||||||||||| || |||||||||||||    
T  10125418 tattcaaaatcattcaaatttcaaaggattgtttaataaat----------tgaattttgtgggattttttagtgaaattttaacaagaaaaagtctttc 10125329  T
Q  198 atgaaaacatgatatttcttaagattg 224  Q
    || |||||| || ||||||||||||||    
T  10125328 ataaaaacacgagatttcttaagattg 10125302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 89 - 224
Target Start/End: Original strand, 3463745 - 3463870
Alignment:
Q  89 gtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatggcttttgtgggattttctagtgaaattttagcatgaaa 188  Q
    |||| |||||||| |||||||||||| |||| ||  ||||||||||||||  ||||||||||| ||||||          |||| ||||||| || ||||    
T  3463745 gtcttgtggtatttaaaatcattcaattttcaaaggattgtttaataaattggattttgatggattttgt----------agtgtaattttaacaagaaa 3463834  T
Q  189 aagtctttcatgaaaacatgatatttcttaagattg 224  Q
    |||||||||||||||| |||| ||||||| ||||||    
T  3463835 aagtctttcatgaaaatatgagatttcttgagattg 3463870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 54 - 147
Target Start/End: Original strand, 3574885 - 3574978
Alignment:
Q  54 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttg 147  Q
    ||||||||||||||||| || |||||||       |||| ||| |||||||||||||||||||||||||  ||||||||||||||  |||||||    
T  3574885 ggtattcaatcaagacttttcatcacttaaaaaaagtcttgtgatattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 3574978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 95 - 158
Target Start/End: Original strand, 379016 - 379079
Alignment:
Q  95 tggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatggcttttgt 158  Q
    |||||||||||||||||||||||| |||  ||||||||||||||  ||||||||| | ||||||    
T  379016 tggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttgatagattttgt 379079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 160 - 217
Target Start/End: Complemental strand, 6224633 - 6224576
Alignment:
Q  160 ggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttctt 217  Q
    ||||||| ||||| ||||||| || |||||||||||||||||||| |||| |||||||    
T  6224633 ggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 6224576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 89 - 138
Target Start/End: Complemental strand, 21370687 - 21370638
Alignment:
Q  89 gtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaat 138  Q
    |||| ||||||||||||||||||||||||| ||| |||||||| ||||||    
T  21370687 gtcttgtggtattcaaaatcattcaaattttgaagtattgtttgataaat 21370638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 89 - 147
Target Start/End: Complemental strand, 6224684 - 6224626
Alignment:
Q  89 gtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttg 147  Q
    |||| |||||||||||||| ||||||||||||||  ||| ||||||||||  |||||||    
T  6224684 gtcttgtggtattcaaaattattcaaatttcgaaggattatttaataaattggattttg 6224626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 160 - 224
Target Start/End: Complemental strand, 215303 - 215240
Alignment:
Q  160 ggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaagattg 224  Q
    ||||||| ||||| ||||||| || |||||||||||||||||||| |||| ||||| | ||||||    
T  215303 ggattttgtagtgtaattttaaca-gaaaaagtctttcatgaaaagatgagatttcatgagattg 215240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 54 - 115
Target Start/End: Complemental strand, 215397 - 215336
Alignment:
Q  54 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaa 115  Q
    ||||||||||||||||| || |||||||       |||| ||||||||||||||||||||||    
T  215397 ggtattcaatcaagacttttcatcacttaaaaaaagtctcgtggtattcaaaatcattcaaa 215336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 133; Significance: 4e-69; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 51 - 224
Target Start/End: Complemental strand, 24501985 - 24501812
Alignment:
Q  51 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatg 150  Q
    |||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  24501985 tgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatg 24501886  T
Q  151 gcttttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaagattg 224  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||    
T  24501885 gattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattg 24501812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 23 - 224
Target Start/End: Complemental strand, 2705019 - 2704818
Alignment:
Q  23 aagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaa 122  Q
    |||||||||||||||||       ||| |||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||    
T  2705019 aagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaa 2704920  T
Q  123 ttattgtttaataaatcagattttgatggcttttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaagat 222  Q
    | |||||||||||||||| |||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| |||    
T  2704919 tgattgtttaataaatcaaattttgatggattttgtgggattttctagtgatattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggat 2704820  T
Q  223 tg 224  Q
    ||    
T  2704819 tg 2704818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 23 - 224
Target Start/End: Complemental strand, 26374630 - 26374429
Alignment:
Q  23 aagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaa 122  Q
    |||||||||||||||||       ||| |||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||    
T  26374630 aagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaa 26374531  T
Q  123 ttattgtttaataaatcagattttgatggcttttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaagat 222  Q
      |||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||    
T  26374530 ggattgtttaataaataagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggat 26374431  T
Q  223 tg 224  Q
    ||    
T  26374430 tg 26374429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 51 - 224
Target Start/End: Complemental strand, 42938289 - 42938116
Alignment:
Q  51 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatg 150  Q
    |||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  42938289 tgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatg 42938190  T
Q  151 gcttttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaagattg 224  Q
    | |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| |||||    
T  42938189 gattttgtgggattttctagtgaaattttagcctgaaaaagtctttcatgaaaacatgagatttcttaggattg 42938116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 51 - 224
Target Start/End: Complemental strand, 42735449 - 42735276
Alignment:
Q  51 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatg 150  Q
    ||||||||||||| |||||||||||||||||       |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  42735449 tgtggtattcaattaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaagtattgtttaataaatcagattttgatg 42735350  T
Q  151 gcttttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaagattg 224  Q
    | |||||||||||||||||||||||||||||| |||||||||||||||| ||||||||| |||||||| |||||    
T  42735349 gattttgtgggattttctagtgaaattttagcttgaaaaagtctttcataaaaacatgagatttcttaggattg 42735276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 51 - 224
Target Start/End: Complemental strand, 7507071 - 7506898
Alignment:
Q  51 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatg 150  Q
    |||||||||||||||||||||||||||||||       |||||||||||||||||| ||||||||||| |||  ||||||||||||||||||||||||||    
T  7507071 tgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaaccattcaaattttgaaggattgtttaataaatcagattttgatg 7506972  T
Q  151 gcttttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaagattg 224  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| |||||    
T  7506971 gattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgtaaacatgagatttcttaggattg 7506898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 51 - 224
Target Start/End: Original strand, 42937387 - 42937558
Alignment:
Q  51 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatg 150  Q
    ||||||||||||||  |||||||||||||||       ||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  42937387 tgtggtattcaatc--gactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatg 42937484  T
Q  151 gcttttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaagattg 224  Q
    | |||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||| |||||    
T  42937485 gattttgtgggattttctagtgaaattttagcattaaaaagtctttcatgaaaacatgagatttcttatgattg 42937558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 23 - 224
Target Start/End: Complemental strand, 5576821 - 5576619
Alignment:
Q  23 aagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnn-gtctagtggtattcaaaatcattcaaatttcga 121  Q
    |||||||||||||||||       ||| |||||||||||||||||||||||||||||||        ||| |||||||||||||||||||||||||||||    
T  5576821 aagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaagtcaagtggtattcaaaatcattcaaatttcga 5576722  T
Q  122 attattgtttaataaatcagattttgatggcttttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaaga 221  Q
    |  ||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||| ||    
T  5576721 agaattgtttaataaaccagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttcttagga 5576622  T
Q  222 ttg 224  Q
    |||    
T  5576621 ttg 5576619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 51 - 223
Target Start/End: Complemental strand, 10392409 - 10392237
Alignment:
Q  51 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatg 150  Q
    |||| ||||||||||||||| ||||||||||       ||||||||||||||| ||||||||||||||||||  ||||||||||||||||||||||||||    
T  10392409 tgtgatattcaatcaagacttttaatcacttaagaaaagtctagtggtattcagaatcattcaaatttcgaaggattgtttaataaatcagattttgatg 10392310  T
Q  151 gcttttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaagatt 223  Q
    | |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||| ||| ||||    
T  10392309 gattttgtgggattttctagtgaaattttagcatgaaaaaatctttcatgaaaacatgagatttattaggatt 10392237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 23 - 224
Target Start/End: Complemental strand, 23115368 - 23115168
Alignment:
Q  23 aagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaa 122  Q
    |||||||||||||||||       ||| |||||||||||||||||||||||||||||||       ||||||||||||||||| |||||||||||| |||    
T  23115368 aagattctttgtcatttaaaaaatgtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaa-tcattcaaatttggaa 23115270  T
Q  123 ttattgtttaataaatcagattttgatggcttttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaagat 222  Q
      ||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||| ||| |||| |||    
T  23115269 ggattgtttaataaatcagattttgatggattttgtgggattttctaatgaaattttggcatgaaaaagtctttcatgaaaacatgagattccttaggat 23115170  T
Q  223 tg 224  Q
    ||    
T  23115169 tg 23115168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 23 - 224
Target Start/End: Original strand, 41479103 - 41479294
Alignment:
Q  23 aagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaa 122  Q
    |||||||||||||||||       ||| |||||||||||||||||||||||||||||||       ||||| ||||||||||||||||||||||||||||    
T  41479103 aagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctaatggtattcaaaatcattcaaatttcgaa 41479202  T
Q  123 ttattgtttaataaatcagattttgatggcttttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaagat 222  Q
    | ||||||||||||||||||          ||||||||||||||||||| |||||||||||||||||| |||||||||||||||||| |||||||| |||    
T  41479203 tgattgtttaataaatcaga----------ttttgtgggattttctagtaaaattttagcatgaaaaaatctttcatgaaaacatgagatttcttaggat 41479292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 54 - 224
Target Start/End: Complemental strand, 10295550 - 10295379
Alignment:
Q  54 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatggct 153  Q
    ||||||||||||||||| || |||||||       |||| |||||||||||||||||||||||||||||  ||||||||||||||  ||||||||||| |    
T  10295550 ggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggat 10295451  T
Q  154 ttt-gtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaagattg 224  Q
    ||| |||||||||| ||||| ||||||| || |||||||||||||||||||| |||| ||||||| ||||||    
T  10295450 ttttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattg 10295379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 54 - 224
Target Start/End: Complemental strand, 14782304 - 14782134
Alignment:
Q  54 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatggct 153  Q
    ||||||||||||||||| || |||| ||       |||| ||||||||||||||||||||||||| |||  ||||||||||||||  ||||||||||| |    
T  14782304 ggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttgatggat 14782205  T
Q  154 tttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaagattg 224  Q
    ||||||||||||| ||||| ||||||| || |||||||||||||||||||| |||| ||||||| ||||||    
T  14782204 tttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattg 14782134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 54 - 224
Target Start/End: Original strand, 26856104 - 26856274
Alignment:
Q  54 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatggct 153  Q
    ||||||||||||||||| || |||||||       |||| ||||||||||||||||||||||||||||| |||||||||||||||  ||||||||||| |    
T  26856104 ggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaagtattgtttaataaattggattttgatggat 26856203  T
Q  154 tttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaagattg 224  Q
    ||||||||||||| ||||| ||||||| || ||||||||||||||  |||| || | ||||||| ||||||    
T  26856204 tttgtgggattttgtagtgtaattttaacaagaaaaagtctttcagaaaaaaataagatttcttgagattg 26856274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 55 - 224
Target Start/End: Original strand, 43959695 - 43959854
Alignment:
Q  55 gtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatggctt 154  Q
    |||||||||||||| ||||||||||||       | ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||    
T  43959695 gtattcaatcaagattcttaatcacttcaaaaaagactagtggtattcaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggatt 43959794  T
Q  155 ttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaagattg 224  Q
    |||||          ||||||||||||||||||||||||||| || ||||||||| |||||||| |||||    
T  43959795 ttgtg----------gtgaaattttagcatgaaaaagtctttaattaaaacatgagatttcttatgattg 43959854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 54 - 224
Target Start/End: Complemental strand, 44725979 - 44725809
Alignment:
Q  54 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatggct 153  Q
    ||||||||||||||||| || |||| ||       |||| ||||||||||||||||||||||||| |||  ||||||||||||||  ||||||||||| |    
T  44725979 ggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttgatggat 44725880  T
Q  154 tttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaagattg 224  Q
    ||||||||||||| ||||| ||||||| || |||||||||||||||||||| |||| ||||||| ||||||    
T  44725879 tttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattg 44725809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 51 - 224
Target Start/End: Complemental strand, 43166862 - 43166689
Alignment:
Q  51 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatg 150  Q
    |||||||||||||||||||||||  ||| ||       |||| |||||||||||||||||||||||||||||  ||||||||||||||  ||||||||||    
T  43166862 tgtggtattcaatcaagactctttgtcattttaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatg 43166763  T
Q  151 gcttttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaagattg 224  Q
    | |||||||||||||| | ||| ||||||| || |||||||| ||||||||||| |||| ||||||| ||||||    
T  43166762 gattttgtgggattttgttgtgtaattttaacaagaaaaagtttttcatgaaaagatgagatttcttgagattg 43166689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 89 - 224
Target Start/End: Complemental strand, 9288591 - 9288456
Alignment:
Q  89 gtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatggcttttgtgggattttctagtgaaattttagcatgaaa 188  Q
    |||| |||||||||||||||||||||||||||||  ||||||||||||||  ||||||||||  |||||||||||||| ||||| ||||||| || ||||    
T  9288591 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgggattttgtagtgtaattttaacaagaaa 9288492  T
Q  189 aagtctttcatgaaaacatgatatttcttaagattg 224  Q
    |||||||||||||||| |||| ||||||| ||||||    
T  9288491 aagtctttcatgaaaagatgagatttcttgagattg 9288456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 54 - 224
Target Start/End: Complemental strand, 19718050 - 19717880
Alignment:
Q  54 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatggct 153  Q
    ||||||||||||||||| || |||| ||       |||| |||||||||||||||||||||||||||||  ||||||||||||||  |||||| |||| |    
T  19718050 ggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaagaattgtttaataaattggattttaatggat 19717951  T
Q  154 tttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaagattg 224  Q
    ||||||||||||| ||||| ||||||| || |||||||||||| ||||||| |||| ||||||| ||||||    
T  19717950 tttgtgggattttgtagtgtaattttaacaagaaaaagtcttttatgaaaagatgagatttcttgagattg 19717880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 94 - 217
Target Start/End: Original strand, 4403184 - 4403307
Alignment:
Q  94 gtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatggcttttgtgggattttctagtgaaattttagcatgaaaaagtc 193  Q
    |||||||||||||||||||||||||||||  ||||||||||||||  | ||||||||| |||||||||||||| ||||| ||||||| || |||||||||    
T  4403184 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgggttttgatggattttgtgggattttttagtgtaattttaacaagaaaaagtc 4403283  T
Q  194 tttcatgaaaacatgatatttctt 217  Q
    ||||||||||| |||| |||||||    
T  4403284 tttcatgaaaatatgagatttctt 4403307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 54 - 204
Target Start/End: Complemental strand, 18958896 - 18958746
Alignment:
Q  54 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatggct 153  Q
    ||||||||||||||||| || |||| ||       |||| |||||||||||||||||||||||||||||  ||||||||||||||  |||||| |||| |    
T  18958896 ggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttaatggat 18958797  T
Q  154 tttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaa 204  Q
    ||||||||||||| ||||| ||||||| || ||||||||||||||||||||    
T  18958796 tttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaa 18958746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 54 - 224
Target Start/End: Complemental strand, 39467637 - 39467467
Alignment:
Q  54 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatggct 153  Q
    ||||||||||||||||| || |||| ||       |||| |||||||||||||||||||||||||||||  ||||||||||||||   |||||||||| |    
T  39467637 ggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgaattttgatggat 39467538  T
Q  154 tttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaagattg 224  Q
    ||| ||||||||| ||||| ||||||| || |||||| ||||||||||||| |||| |||| || ||||||    
T  39467537 tttatgggattttgtagtgtaattttaacaagaaaaaatctttcatgaaaagatgagattttttgagattg 39467467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 96 - 224
Target Start/End: Complemental strand, 4950143 - 4950015
Alignment:
Q  96 ggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatggcttttgtgggattttctagtgaaattttagcatgaaaaagtctt 195  Q
    ||||||||||||||||||| |||| ||  ||| |||||||||| ||||||||||||  ||||||| ||||||||||||||||||||||||||||| | ||    
T  4950143 ggtattcaaaatcattcaagtttcaaaagattatttaataaattagattttgatggaatttgtggaattttctagtgaaattttagcatgaaaaaatatt 4950044  T
Q  196 tcatgaaaacatgatatttcttaagattg 224  Q
    ||||| |||||| | ||||||||| ||||    
T  4950043 tcatgcaaacataagatttcttaaaattg 4950015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 23 - 206
Target Start/End: Complemental strand, 32711482 - 32711311
Alignment:
Q  23 aagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaa 122  Q
    |||||||||||||||||       ||| |||||||||||||||||||||||||||||||       ||||||||||||||||||||||| ||||||||||    
T  32711482 aagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcatttaaatttcgaa 32711383  T
Q  123 ttattgtttaataaatcagattttgatggcttttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaaca 206  Q
      |||||||||||||||||||          ||||||| |   |||| ||||||||||||||||||||||||||||||||||||    
T  32711382 ggattgtttaataaatcagat----------tttgtggaa--atctattgaaattttagcatgaaaaagtctttcatgaaaaca 32711311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 54 - 224
Target Start/End: Original strand, 32497562 - 32497722
Alignment:
Q  54 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatggct 153  Q
    ||||||||||||||||| || |||||||       |||| |||||||||||||||||||||||||||||| ||||||||||||||          ||| |    
T  32497562 ggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaat----------tggat 32497651  T
Q  154 tttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaagattg 224  Q
    ||||||||||||| ||||| ||||||| || || ||||||||||||||||| |||| ||||||| ||||||    
T  32497652 tttgtgggattttgtagtgtaattttaacaagagaaagtctttcatgaaaagatgagatttcttgagattg 32497722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 54 - 224
Target Start/End: Complemental strand, 18306130 - 18305970
Alignment:
Q  54 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatggct 153  Q
    ||||||||||||||||| || |||| ||       |||| |||||||||||||||||||||||||||||  ||||||||||||||          ||| |    
T  18306130 ggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaagattgtttaataaat----------tggat 18306041  T
Q  154 tttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaagattg 224  Q
    ||||||||||||| ||||| ||||||| || |||||||||||||||||||| |||| ||||||| ||||||    
T  18306040 tttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattg 18305970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 54 - 224
Target Start/End: Original strand, 7466372 - 7466532
Alignment:
Q  54 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatggct 153  Q
    ||||||||||||||||| || ||| |||       |||| ||||||||||||||||||||||||| |||  ||||||||||||||          ||| |    
T  7466372 ggtattcaatcaagacttttcatcgcttaaaaaaagtcttgtggtattcaaaatcattcaaattttgaagaattgtttaataaat----------tggat 7466461  T
Q  154 tttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaagattg 224  Q
    ||||||||||||| ||||| ||||||| || |||||||||||||||||||| |||| ||||||| ||||||    
T  7466462 tttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattg 7466532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 97 - 217
Target Start/End: Complemental strand, 39189940 - 39189822
Alignment:
Q  97 gtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatggcttttgtgggattttctagtgaaattttagcatgaaaaagtcttt 196  Q
    |||||||| |||||||||||||||||  ||||||||||||||  || |||||||| |||||  | |||||||||| |||||||| || |||||| |||||    
T  39189940 gtattcaacatcattcaaatttcgaaggattgtttaataaat-tgaatttgatggattttgatgaattttctagt-aaattttaacaagaaaaaatcttt 39189843  T
Q  197 catgaaaacatgatatttctt 217  Q
    ||||||||||||| |||||||    
T  39189842 catgaaaacatgagatttctt 39189822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 97 - 204
Target Start/End: Complemental strand, 13478376 - 13478269
Alignment:
Q  97 gtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatggcttttgtgggattttctagtgaaattttagcatgaaaaagtcttt 196  Q
    |||||||||||| || ||||||||||  |||||||||||||| |||||| | ||| |||||| ||||||| |||  |||||||||||||| |||||||||    
T  13478376 gtattcaaaatcttttaaatttcgaaggattgtttaataaattagatttcgttggattttgtaggattttttagctaaattttagcatgataaagtcttt 13478277  T
Q  197 catgaaaa 204  Q
     |||||||    
T  13478276 tatgaaaa 13478269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 95 - 203
Target Start/End: Complemental strand, 8410526 - 8410416
Alignment:
Q  95 tggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatggcttttgtggga--ttttctagtgaaattttagcatgaaaaagt 192  Q
    ||||||||||||||||| |||||| |||  |||||||| |||||  || |||||||| ||||||||||  |||| |||||||||||||| |||| |||||    
T  8410526 tggtattcaaaatcattgaaatttggaaggattgtttactaaattggactttgatggattttgtgggattttttttagtgaaattttagtatgacaaagt 8410427  T
Q  193 ctttcatgaaa 203  Q
    |||||| ||||    
T  8410426 ctttcacgaaa 8410416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 54 - 158
Target Start/End: Original strand, 16362233 - 16362337
Alignment:
Q  54 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatggct 153  Q
    ||||||||||||||||| || || ||||       |||| |||||||||||||||||||||||||||||  ||||||||||||||  ||||||||||| |    
T  16362233 ggtattcaatcaagacttttcattacttaaaaaaagtctcgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggat 16362332  T
Q  154 tttgt 158  Q
    |||||    
T  16362333 tttgt 16362337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 54 - 147
Target Start/End: Original strand, 31623732 - 31623825
Alignment:
Q  54 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttg 147  Q
    ||||||||||||||||| || |||||||       |||| |||||||||||||||||||||||||||||  ||||||||||||||  |||||||    
T  31623732 ggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 31623825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 89 - 147
Target Start/End: Complemental strand, 4031392 - 4031334
Alignment:
Q  89 gtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttg 147  Q
    |||| |||||||||||||||||||||||||||||  ||||||||||||||  |||||||    
T  4031392 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 4031334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 94 - 224
Target Start/End: Complemental strand, 42305914 - 42305794
Alignment:
Q  94 gtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatggcttttgtgggattttctagtgaaattttagcatgaaaaagtc 193  Q
    |||||||||||||| ||||||||||||||  |||||||||| |||  |||||| ||          ||||||| ||||| ||||||| || |||||||||    
T  42305914 gtggtattcaaaataattcaaatttcgaaggattgtttaatcaattggattttaat----------ggattttgtagtgtaattttaacaagaaaaagtc 42305825  T
Q  194 tttcatgaaaacatgatatttcttaagattg 224  Q
     |||||||||| |||| ||||||| ||||||    
T  42305824 attcatgaaaaaatgagatttcttgagattg 42305794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 89 - 158
Target Start/End: Original strand, 37857191 - 37857260
Alignment:
Q  89 gtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatggcttttgt 158  Q
    |||| |||||||||||| ||||||||||||  ||  ||||||||||||||  ||||||||||| ||||||    
T  37857191 gtcttgtggtattcaaattcattcaaattttaaaggattgtttaataaattggattttgatggattttgt 37857260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 160 - 204
Target Start/End: Complemental strand, 4031341 - 4031297
Alignment:
Q  160 ggattttctagtgaaattttagcatgaaaaagtctttcatgaaaa 204  Q
    ||||||| ||||| ||||||| || ||||||||||||||||||||    
T  4031341 ggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaa 4031297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 160 - 224
Target Start/End: Original strand, 31623818 - 31623882
Alignment:
Q  160 ggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaagattg 224  Q
    ||||||| ||||| ||||||| || |||||||| ||||||||||| || | ||||||| ||||||    
T  31623818 ggattttgtagtgtaattttaacaagaaaaagtttttcatgaaaagataagatttcttgagattg 31623882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0400 (Bit Score: 132; Significance: 1e-68; HSPs: 1)
Name: scaffold0400
Description:

Target: scaffold0400; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 23 - 224
Target Start/End: Complemental strand, 15234 - 15033
Alignment:
Q  23 aagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaa 122  Q
    |||||||||||||||||       ||| ||| |||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||    
T  15234 aagattctttgtcatttaaaaaaagtcttgtagtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaa 15135  T
Q  123 ttattgtttaataaatcagattttgatggcttttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaagat 222  Q
      ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||    
T  15134 ggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgaaatttcttaggat 15035  T
Q  223 tg 224  Q
    ||    
T  15034 tg 15033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0365 (Bit Score: 132; Significance: 1e-68; HSPs: 1)
Name: scaffold0365
Description:

Target: scaffold0365; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 23 - 224
Target Start/End: Complemental strand, 15877 - 15676
Alignment:
Q  23 aagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaa 122  Q
    |||||||||||||||||       ||| ||| |||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||    
T  15877 aagattctttgtcatttaaaaaaagtcttgtagtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaa 15778  T
Q  123 ttattgtttaataaatcagattttgatggcttttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaagat 222  Q
      ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||    
T  15777 ggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgaaatttcttaggat 15678  T
Q  223 tg 224  Q
    ||    
T  15677 tg 15676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 128; Significance: 3e-66; HSPs: 45)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 23 - 224
Target Start/End: Complemental strand, 19452009 - 19451808
Alignment:
Q  23 aagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaa 122  Q
    |||||||||||||||||       ||| ||||||||| |||||||||||||||||||||       ||||||||||||||||||||||||||||||||||    
T  19452009 aagattctttgtcatttaaaaaaagtcttgtggtatttaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaa 19451910  T
Q  123 ttattgtttaataaatcagattttgatggcttttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaagat 222  Q
      || |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||    
T  19451909 ggatcgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttatgat 19451810  T
Q  223 tg 224  Q
    ||    
T  19451809 tg 19451808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 47 - 224
Target Start/End: Complemental strand, 45760186 - 45760009
Alignment:
Q  47 gtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagatttt 146  Q
    |||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||| ||||||  ||||||||||||||||||||||    
T  45760186 gtcatgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaacttcgaaggattgtttaataaatcagatttt 45760087  T
Q  147 gatggcttttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaagattg 224  Q
    ||||| |||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| |||||||| |||||    
T  45760086 gatggattttgtgggattttctagtgaaattttagcatgaaaaagtatttgatgaaaacatgagatttcttaggattg 45760009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 124; E-Value: 8e-64
Query Start/End: Original strand, 23 - 224
Target Start/End: Original strand, 21222146 - 21222347
Alignment:
Q  23 aagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaa 122  Q
    |||||||||||||||||       ||| |||||||||||||||||||||||||||||||       |||||| |||||||||||||||||||||||||||    
T  21222146 aagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagaggtattcaaaatcattcaaatttcgaa 21222245  T
Q  123 ttattgtttaataaatcagattttgatggcttttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaagat 222  Q
      |||||||||||||| |||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||| |||    
T  21222246 ggattgtttaataaataagattttgatggattttgtgggattttttagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggat 21222345  T
Q  223 tg 224  Q
    ||    
T  21222346 tg 21222347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 23 - 224
Target Start/End: Complemental strand, 6304454 - 6304252
Alignment:
Q  23 aagattctttgtcatttnnnnnnngtcatgtggtattcaatcaaga-ctcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcga 121  Q
    |||||||||||||||||       ||| |||||||||||| ||| | |||||||||||||       |||||||||||||||||||||||||||||||||    
T  6304454 aagattctttgtcatttaaaaaaagtcttgtggtattcaaccaaaaactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcga 6304355  T
Q  122 attattgtttaataaatcagattttgatggcttttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaaga 221  Q
    |  ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||    
T  6304354 aggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgaaatttcttatga 6304255  T
Q  222 ttg 224  Q
    |||    
T  6304254 ttg 6304252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 51 - 224
Target Start/End: Complemental strand, 49198441 - 49198269
Alignment:
Q  51 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatg 150  Q
    ||||||||||||| |||||||||||||||||       ||  ||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  49198441 tgtggtattcaat-aagactcttaatcacttaaaaaaagttcagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatg 49198343  T
Q  151 gcttttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaagattg 224  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  49198342 gattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaggattg 49198269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 23 - 218
Target Start/End: Original strand, 35279671 - 35279866
Alignment:
Q  23 aagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaa 122  Q
    |||||||||||||||||       ||| |||||||||||||||||||| ||||||||||       ||||||||||||||||||||||| ||||||||||    
T  35279671 aagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactattaatcacttaaaaaaagtctagtggtattcaaaatcatttaaatttcgaa 35279770  T
Q  123 ttattgtttaataaatcagattttgatggcttttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttctta 218  Q
      ||||||||||||||||||||||||||| |||||||||||||||||||||||||| | |||||||||||||||||||||||||||| ||||||||    
T  35279771 ggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaatttcaacatgaaaaagtctttcatgaaaacatgagatttctta 35279866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 51 - 205
Target Start/End: Original strand, 45535971 - 45536125
Alignment:
Q  51 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatg 150  Q
    ||||||||||||||||||||||||||| |||       ||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  45535971 tgtggtattcaatcaagactcttaatcgcttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaagattgtttaataaatcagattttgatg 45536070  T
Q  151 gcttttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaac 205  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45536071 gattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaac 45536125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 51 - 224
Target Start/End: Complemental strand, 50192724 - 50192550
Alignment:
Q  51 tgtggtattcaatcaagactcttaatcacttnnnnnnn-gtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgat 149  Q
    |||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||| |||  |||||||||||||||||||||||||    
T  50192724 tgtggtattcaatcaagactcttaatcacttaaaaaaaagtctagtggtattcaaaatcattcaaattttgaaggattgtttaataaatcagattttgat 50192625  T
Q  150 ggcttttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaagattg 224  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| |||||    
T  50192624 ggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagattttttaggattg 50192550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 47 - 224
Target Start/End: Original strand, 47780734 - 47780911
Alignment:
Q  47 gtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagatttt 146  Q
    |||||||||||||||||||||||||||||||||||       |||||||| |||||||||||||||||| ||  ||  ||||||||||||||||||||||    
T  47780734 gtcatgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtgatattcaaaatcattcaaaattaaaaggattgtttaataaatcagatttt 47780833  T
Q  147 gatggcttttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaagattg 224  Q
    ||||| |||||||||||||||||||||||||||| ||||||||||| |||||||||||||||| ||||||||||||||    
T  47780834 gatggattttgtgggattttctagtgaaattttaacatgaaaaagtttttcatgaaaacatgagatttcttaagattg 47780911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 55 - 224
Target Start/End: Complemental strand, 35679297 - 35679128
Alignment:
Q  55 gtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatggctt 154  Q
    |||||||||||||||||||||||||||       |||  |||||||||||||||||||||||||||||  ||||||||||||||||||||||||||| ||    
T  35679297 gtattcaatcaagactcttaatcacttaaaaaaagtcatgtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggatt 35679198  T
Q  155 ttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaagattg 224  Q
    |  ||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||    
T  35679197 tgatgggattttctagtgaaattttagcatgaaaaagtctttcatgaagacatgagatttcttaagattg 35679128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 50 - 218
Target Start/End: Original strand, 49418110 - 49418278
Alignment:
Q  50 atgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgat 149  Q
    |||||||||||||| |||||||||||||||||       ||||||||||||||||||||||||||||||| ||  |||||||||||||||||||||||||    
T  49418110 atgtggtattcaattaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcaaaggattgtttaataaatcagattttgat 49418209  T
Q  150 ggcttttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttctta 218  Q
    || ||||||||||||||||| |||||||||||||||||||| ||||||||||||| |||| ||||||||    
T  49418210 ggattttgtgggattttctattgaaattttagcatgaaaaaatctttcatgaaaatatgagatttctta 49418278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 51 - 224
Target Start/End: Complemental strand, 28824545 - 28824373
Alignment:
Q  51 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatg 150  Q
    |||||||||||||||||||||||||||||||       |||| |||||||||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  28824545 tgtggtattcaatcaagactcttaatcacttaaaaacagtcttgtggtattcaaaatcattcaaatttcgaag-attgtttaataaatcagattttgatg 28824447  T
Q  151 gcttttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaagattg 224  Q
    | |||||||||||||||||| ||||||||| ||||||||||||||| || ||||||||| |||||||| |||||    
T  28824446 gattttgtgggattttctagggaaattttaacatgaaaaagtcttttataaaaacatgagatttcttaggattg 28824373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 23 - 224
Target Start/End: Complemental strand, 47654553 - 47654351
Alignment:
Q  23 aagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnn-gtctagtggtattcaaaatcattcaaatttcga 121  Q
    |||||||||||||||||       ||| |||||||||||||||| ||||||||||||||        ||||||||||||||||||| |||||||||||||    
T  47654553 aagattctttgtcatttaaaagaagtcttgtggtattcaatcaaaactcttaatcacttaaaaaaaagtctagtggtattcaaaattattcaaatttcga 47654454  T
Q  122 attattgtttaataaatcagattttgatggcttttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaaga 221  Q
    |  ||||||||||||||||||||||||||| |||||||| ||||||||| ||||||||||||||||||||| |||||||||||||||| |||||||| ||    
T  47654453 aggattgtttaataaatcagattttgatggattttgtggaattttctagggaaattttagcatgaaaaagtatttcatgaaaacatgagatttcttagga 47654354  T
Q  222 ttg 224  Q
    |||    
T  47654353 ttg 47654351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 51 - 214
Target Start/End: Complemental strand, 32589126 - 32588963
Alignment:
Q  51 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatg 150  Q
    ||||| ||||||||||||||||| |||||||       |||| ||||||||||||||||||||||||| |||  ||||||||||||||| ||||||||||    
T  32589126 tgtggcattcaatcaagactcttcatcacttaaaagaagtcttgtggtattcaaaatcattcaaattttgaaggattgtttaataaatcggattttgatg 32589027  T
Q  151 gcttttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatattt 214  Q
    | ||||||| |||||||||||||||||||||||| |||||||||||||||||||||||| ||||    
T  32589026 gattttgtgagattttctagtgaaattttagcataaaaaagtctttcatgaaaacatgagattt 32588963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 23 - 189
Target Start/End: Original strand, 730147 - 730314
Alignment:
Q  23 aagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnn-gtctagtggtattcaaaatcattcaaatttcga 121  Q
    |||||||||||||||||       ||| |||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||    
T  730147 aagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaagtctagtggtattcaaaatcattcaaatttcga 730246  T
Q  122 attattgtttaataaatcagattttgatggcttttgtgggattttctagtgaaattttagcatgaaaa 189  Q
       ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||    
T  730247 cgaattgtttaataaatcagattttgatggattttgtgagattttctagtgaaattttagcatgaaaa 730314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 51 - 224
Target Start/End: Original strand, 29556131 - 29556305
Alignment:
Q  51 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatg 150  Q
    |||| ||||||||||||||||||||||||||        ||||||| |||||||||||||||||||||||||  |||||||||||||| |||||||||||    
T  29556131 tgtgttattcaatcaagactcttaatcacttaaaaaaaatctagtgttattcaaaatcattcaaatttcgaaagattgtttaataaattagattttgatg 29556230  T
Q  151 gcttttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaa-acatgatatttcttaagattg 224  Q
    | |||| |||||||||||| |||||||||||| ||||||||||||| |||||| |||||| |||||||| |||||    
T  29556231 gattttatgggattttctaatgaaattttagcttgaaaaagtcttttatgaaacacatgagatttcttaggattg 29556305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 94 - 218
Target Start/End: Complemental strand, 31572327 - 31572203
Alignment:
Q  94 gtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatggcttttgtgggattttctagtgaaattttagcatgaaaaagtc 193  Q
    |||||||||||||||||| ||||||||||  ||||||||||||||||||||||||||| |||||||||||||| |||||||||||||| |||||||||||    
T  31572327 gtggtattcaaaatcatttaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttatagtgaaattttaggatgaaaaagtc 31572228  T
Q  194 tttcatgaaaacatgatatttctta 218  Q
    |||||||||| ||||| ||||||||    
T  31572227 tttcatgaaatcatgagatttctta 31572203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 89 - 224
Target Start/End: Complemental strand, 48177597 - 48177462
Alignment:
Q  89 gtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatggcttttgtgggattttctagtgaaattttagcatgaaa 188  Q
    |||| |||||||||||||||||||||||||||||| ||||||||||||||  ||||||||||| |||||||||||||| ||||| ||||||| || ||||    
T  48177597 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 48177498  T
Q  189 aagtctttcatgaaaacatgatatttcttaagattg 224  Q
    |||||||||||||||| |||| ||||||| ||||||    
T  48177497 aagtctttcatgaaaagatgagatttcttgagattg 48177462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 48 - 195
Target Start/End: Original strand, 48524343 - 48524490
Alignment:
Q  48 tcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttg 147  Q
    |||||||||||| |||||| ||||||||||||||       |||| ||| ||||||||||||||||||||| |||  ||||||||||||||||| |||||    
T  48524343 tcatgtggtatttaatcaaaactcttaatcacttaaaaaaagtcttgtgatattcaaaatcattcaaattttgaaagattgtttaataaatcagtttttg 48524442  T
Q  148 atggcttttgtgggattttctagtgaaattttagcatgaaaaagtctt 195  Q
    |||| |||||||||||||||||||||||||||| ||||||||||||||    
T  48524443 atggattttgtgggattttctagtgaaattttaacatgaaaaagtctt 48524490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 54 - 224
Target Start/End: Original strand, 6312604 - 6312774
Alignment:
Q  54 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatggct 153  Q
    ||||||||||||||||| || |||| ||       |||| |||||||||||||||||||||||||||||  ||||||||||||||  ||||||||||| |    
T  6312604 ggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggat 6312703  T
Q  154 tttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaagattg 224  Q
    ||||||||||||| ||||| ||||||| || |||||||||||||||||||| |||| ||||||| ||||||    
T  6312704 tttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattg 6312774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 54 - 224
Target Start/End: Complemental strand, 29396558 - 29396388
Alignment:
Q  54 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatggct 153  Q
    ||||||||||||||||| || |||| ||       |||| |||||||||||||||||||||||||||||  ||||||||||||||  ||||||||||| |    
T  29396558 ggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggat 29396459  T
Q  154 tttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaagattg 224  Q
    ||||||||||||| ||||| ||||||| || |||||||||||||||||||| |||| ||||||| ||||||    
T  29396458 tttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattg 29396388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 51 - 224
Target Start/End: Complemental strand, 37014813 - 37014640
Alignment:
Q  51 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatg 150  Q
    |||||||||||||||| | |||| |||||||       |||| ||| |||||||||||||||||||||| ||  ||||||| ||||||   |||||||||    
T  37014813 tgtggtattcaatcaatattcttcatcacttaaaaaaagtcttgtgatattcaaaatcattcaaatttctaaagattgttttataaattgaattttgatg 37014714  T
Q  151 gcttttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaagattg 224  Q
    | |||||| ||||||||||||||||||||||||||||||||||| |||| ||||||||| ||||||||||||||    
T  37014713 gattttgtcggattttctagtgaaattttagcatgaaaaagtctctcataaaaacatgagatttcttaagattg 37014640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 54 - 224
Target Start/End: Original strand, 51701610 - 51701780
Alignment:
Q  54 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatggct 153  Q
    ||||||||||||||||| || |||| ||       |||| |||||||||||||||||||||||||||||  ||||||||||||||  ||||||||||| |    
T  51701610 ggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggat 51701709  T
Q  154 tttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaagattg 224  Q
    ||||||||||||| ||||| ||||||| || |||||||||||||||||||| |||| |||| || ||||||    
T  51701710 tttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagattttttgagattg 51701780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 89 - 217
Target Start/End: Complemental strand, 9577567 - 9577439
Alignment:
Q  89 gtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatggcttttgtgggattttctagtgaaattttagcatgaaa 188  Q
    |||| ||| ||||||||||||||||||||| |||  ||||||||||||||  ||||||||||| ||||||| ||||||||||||||||||||| ||||||    
T  9577567 gtcttgtgatattcaaaatcattcaaatttagaaggattgtttaataaattggattttgatggattttgtgagattttctagtgaaattttagaatgaaa 9577468  T
Q  189 aagtctttcatgaaaacatgatatttctt 217  Q
    || |||||||||||||||||| |||||||    
T  9577467 aaatctttcatgaaaacatgagatttctt 9577439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 89 - 224
Target Start/End: Original strand, 25612222 - 25612357
Alignment:
Q  89 gtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatggcttttgtgggattttctagtgaaattttagcatgaaa 188  Q
    |||| |||||||||||||||||||||||||| ||  ||||||||||||||  ||||||||||| |||||||||||||| ||||  ||||||| || ||||    
T  25612222 gtcttgtggtattcaaaatcattcaaatttcaaaggattgtttaataaattggattttgatggattttgtgggattttgtagtataattttaacaagaaa 25612321  T
Q  189 aagtctttcatgaaaacatgatatttcttaagattg 224  Q
    |||||||||||||||| |||| ||||||| ||||||    
T  25612322 aagtctttcatgaaaagatgagatttcttgagattg 25612357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 54 - 204
Target Start/End: Original strand, 46328072 - 46328222
Alignment:
Q  54 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatggct 153  Q
    ||||||||||||||||| || |||||||       |||| |||||||||||||||||||||||||||||  |||||||||| |||  ||||||||||| |    
T  46328072 ggtattcaatcaagacttttcatcacttacaaaaagtctcgtggtattcaaaatcattcaaatttcgaaggattgtttaattaattggattttgatggat 46328171  T
Q  154 tttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaa 204  Q
    ||||||||||||| ||||| ||||||| || ||||||||||||||| ||||    
T  46328172 tttgtgggattttgtagtgtaattttaacaagaaaaagtctttcataaaaa 46328222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 94 - 224
Target Start/End: Complemental strand, 9322630 - 9322500
Alignment:
Q  94 gtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatggcttttgtgggattttctagtgaaattttagcatgaaaaagtc 193  Q
    ||||||||||||||||||||||||| |||  ||||||||||||||   |||||||||| |||| ||||||||| ||||| ||||||| || |||||||||    
T  9322630 gtggtattcaaaatcattcaaatttagaaggattgtttaataaattgaattttgatggattttatgggattttgtagtgtaattttaacaagaaaaagtc 9322531  T
Q  194 tttcatgaaaacatgatatttcttaagattg 224  Q
    ||||||||||| |||| ||||||| ||||||    
T  9322530 tttcatgaaaagatgagatttcttgagattg 9322500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 94 - 224
Target Start/End: Complemental strand, 15835183 - 15835053
Alignment:
Q  94 gtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatggcttttgtgggattttctagtgaaattttagcatgaaaaagtc 193  Q
    |||||||||||||||||||||||| | ||  ||||||||||||||  ||||||||||| |||| ||||||||| ||||| ||||||| || |||||||||    
T  15835183 gtggtattcaaaatcattcaaattgcaaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaattttaacaagaaaaagtc 15835084  T
Q  194 tttcatgaaaacatgatatttcttaagattg 224  Q
    ||||||||||| |||| ||||||| ||||||    
T  15835083 tttcatgaaaagatgagatttcttgagattg 15835053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 51 - 224
Target Start/End: Original strand, 33025539 - 33025703
Alignment:
Q  51 tgtggtattcaatcaaga-ctcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgat 149  Q
    |||||||||||||||| | |||||||||||||       |||| ||||||||||||||||||||||||| |||  ||||||||||| ||||||||||       
T  33025539 tgtggtattcaatcaaaaactcttaatcacttaaaaaaagtcttgtggtattcaaaatcattcaaattttgaaggattgtttaatacatcagatttt--- 33025635  T
Q  150 ggcttttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaagattg 224  Q
           ||||||||||||| | ||||||||||||||||||||||||||||||||||||| |||||||| |||||    
T  33025636 -------gtgggattttctaataaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttatgattg 33025703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 23 - 224
Target Start/End: Complemental strand, 28387594 - 28387393
Alignment:
Q  23 aagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaa 122  Q
    |||||||||||||||||       ||| || ||||||||||||||||| || |||| ||        ||| |||||||||||| ||||||||||||||||    
T  28387594 aagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaaatcttgtggtattcaaattcattcaaatttcgaa 28387495  T
Q  123 ttattgtttaataaatcagattttgatggcttttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaagat 222  Q
      ||||||||||||||  ||||||||||| |||||||||||||| ||||  ||||||| ||  |||||||||||||| |||| |||| ||||||| ||||    
T  28387494 ggattgtttaataaattggattttgatggattttgtgggattttgtagtttaattttaacaaaaaaaagtctttcataaaaagatgagatttcttgagat 28387395  T
Q  223 tg 224  Q
    ||    
T  28387394 tg 28387393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 54 - 224
Target Start/End: Complemental strand, 38536259 - 38536099
Alignment:
Q  54 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatggct 153  Q
    ||||||||||||||||| || || ||||       |||| |||||||||||||| ||||||||||| ||  ||||||||||||||  |||||||||        
T  38536259 ggtattcaatcaagacttttcattacttaacaaaagtcttgtggtattcaaaattattcaaatttcaaaggattgtttaataaattggattttgat---- 38536164  T
Q  154 tttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaagattg 224  Q
          ||||||| ||||| ||||||| || |||||||||||||||||||| |||| ||||||| ||||||    
T  38536163 ------ggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattg 38536099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 54 - 224
Target Start/End: Complemental strand, 38558477 - 38558317
Alignment:
Q  54 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatggct 153  Q
    ||||||||||||||||| || || ||||       |||| |||||||||||||| ||||||||||| ||  ||||||||||||||  |||||||||        
T  38558477 ggtattcaatcaagacttttcattacttaacaaaagtcttgtggtattcaaaattattcaaatttcaaaggattgtttaataaattggattttgat---- 38558382  T
Q  154 tttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaagattg 224  Q
          ||||||| ||||| ||||||| || |||||||||||||||||||| |||| ||||||| ||||||    
T  38558381 ------ggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattg 38558317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 97 - 188
Target Start/End: Original strand, 955823 - 955904
Alignment:
Q  97 gtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatggcttttgtgggattttctagtgaaattttagcatgaaa 188  Q
    ||||||||||||||||||||||||||   ||||||||||||||||||||||||          |||||||||||||||||||||||||||||    
T  955823 gtattcaaaatcattcaaatttcgaagggttgtttaataaatcagattttgat----------ggattttctagtgaaattttagcatgaaa 955904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 56 - 224
Target Start/End: Original strand, 29219318 - 29219476
Alignment:
Q  56 tattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatggcttt 155  Q
    ||||||||||||||| || |||||||       |||| ||||||||||||||||||||||||  |||  ||||||||||||||  |||||||||          
T  29219318 tattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaattaagaaggattgtttaataaattggattttgat------ 29219411  T
Q  156 tgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaagattg 224  Q
        ||||||| ||||| ||||||| || |||||||| ||||||||||| |||| ||||||| ||||||    
T  29219412 ----ggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagatgagatttcttgagattg 29219476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 94 - 214
Target Start/End: Complemental strand, 48668905 - 48668795
Alignment:
Q  94 gtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatggcttttgtgggattttctagtgaaattttagcatgaaaaagtc 193  Q
    |||||||||||||| ||||||||||||||  ||||||||||||||          ||| |||||||||||| | ||||| ||||||| || |||||||||    
T  48668905 gtggtattcaaaattattcaaatttcgaaagattgtttaataaat----------tggattttgtgggattctgtagtgtaattttaacaagaaaaagtc 48668816  T
Q  194 tttcatgaaaacatgatattt 214  Q
    ||||||||||| |||| ||||    
T  48668815 tttcatgaaaagatgagattt 48668795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 54 - 147
Target Start/End: Original strand, 18798521 - 18798614
Alignment:
Q  54 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttg 147  Q
    ||||||||||||||||| || |||| ||       |||| |||||||||||||||||||||||||||||  ||||||||||||||  |||||||    
T  18798521 ggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 18798614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 114 - 216
Target Start/End: Original strand, 38319996 - 38320098
Alignment:
Q  114 aatttcgaattattgtttaataaatcagattttgatggcttttgt-gggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatat 212  Q
    ||||| |||| |||||||| |||||  ||||||||| | |||||| ||| |||| ||||||| ||||||||  ||||||||||||||||||| |||||||    
T  38319996 aattttgaatgattgtttactaaataggattttgatagattttgttgggtttttttagtgaa-ttttagcacaaaaaagtctttcatgaaaatatgatat 38320094  T
Q  213 ttct 216  Q
    ||||    
T  38320095 ttct 38320098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 54 - 138
Target Start/End: Original strand, 49230916 - 49231000
Alignment:
Q  54 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaat 138  Q
    ||||||||||||||||| || |||||||       |||| |||||||||||||||||||||||||||||  ||| ||||||||||    
T  49230916 ggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattatttaataaat 49231000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 89 - 180
Target Start/End: Original strand, 51085860 - 51085951
Alignment:
Q  89 gtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatggcttttgtgggattttctagtgaaatttta 180  Q
    |||| |||||||||||||| |||||||||| |||  ||| || |||||||  ||||||||||  |||||||| ||||||| |||||||||||    
T  51085860 gtctcgtggtattcaaaataattcaaattttgaaggattattaaataaattggattttgatgaattttgtggaattttcttgtgaaatttta 51085951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 23 - 111
Target Start/End: Original strand, 22183369 - 22183457
Alignment:
Q  23 aagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcatt 111  Q
    |||||||||||||||||       ||| |||||||||||||||||| ||||||||||||       |||||||||||||||||||||||    
T  22183369 aagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagattcttaatcacttaaaaaaagtctagtggtattcaaaatcatt 22183457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 54 - 209
Target Start/End: Complemental strand, 5495266 - 5495121
Alignment:
Q  54 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatggct 153  Q
    ||||||||||||||||| || |||||||       |||| |||||||||||||||||| ||||||| ||  ||| ||||||||||          ||| |    
T  5495266 ggtattcaatcaagacttttcatcacttaaaaaaagtctcgtggtattcaaaatcatttaaatttcaaaggattatttaataaat----------tggat 5495177  T
Q  154 tttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatga 209  Q
    ||||||||||||| ||||| ||||||| || ||||||||| || ||||||| ||||    
T  5495176 tttgtgggattttgtagtgtaattttaacaagaaaaagtcctttatgaaaagatga 5495121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 97 - 147
Target Start/End: Complemental strand, 31622586 - 31622536
Alignment:
Q  97 gtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttg 147  Q
    ||||||||||||||||||||||| ||  ||||||||||||||| |||||||    
T  31622586 gtattcaaaatcattcaaatttcaaaagattgtttaataaatcggattttg 31622536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 160 - 216
Target Start/End: Original strand, 18798607 - 18798663
Alignment:
Q  160 ggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttct 216  Q
    ||||||| ||||| ||||||| || |||||||||||||||||||| |||| ||||||    
T  18798607 ggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 18798663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 51 - 190
Target Start/End: Original strand, 47784414 - 47784542
Alignment:
Q  51 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatg 150  Q
    |||||||||||||||||||||||  ||| ||       |||| |||||||||||||| ||||||| ||| ||  ||||||||||||||          ||    
T  47784414 tgtggtattcaatcaagactctttgtca-tttaaaaaagtcttgtggtattcaaaattattcaaacttctaaagattgtttaataaat----------tg 47784502  T
Q  151 gcttttgtgggattttctagtgaaattttagcatgaaaaa 190  Q
    | ||||||| ||||||||||| ||||||||||||||||||    
T  47784503 gattttgtgagattttctagttaaattttagcatgaaaaa 47784542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 81
Target Start/End: Original strand, 953818 - 953876
Alignment:
Q  23 aagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcactt 81  Q
    |||||||||||||||||       ||| |||||||||| ||||||||||||||||||||    
T  953818 aagattctttgtcatttaaaaaaagtcttgtggtattcgatcaagactcttaatcactt 953876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 125; Significance: 2e-64; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 51 - 224
Target Start/End: Complemental strand, 38777 - 38605
Alignment:
Q  51 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatg 150  Q
    |||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||  |||||||||||| |||||||||||||    
T  38777 tgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataa-tcagattttgatg 38679  T
Q  151 gcttttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaagattg 224  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||    
T  38678 gattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattg 38605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 125; Significance: 2e-64; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 51 - 224
Target Start/End: Original strand, 102129 - 102302
Alignment:
Q  51 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatg 150  Q
    |||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  102129 tgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaagattgtttaataaatcagattttgatg 102228  T
Q  151 gcttttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaagattg 224  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||| |||| |||| |||||||| |||||    
T  102229 gattttgtgggattttctagtgaaattttagcatgaaaaagtctttcataaaaatatgagatttcttatgattg 102302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 113; Significance: 3e-57; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 51 - 224
Target Start/End: Complemental strand, 39068 - 38895
Alignment:
Q  51 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatg 150  Q
    ||||||||||||| |||||||||||||||||       |||||||| ||||||||||||||||||||| |||  ||||||||||||||||||||||||||    
T  39068 tgtggtattcaataaagactcttaatcacttaaaagaagtctagtgatattcaaaatcattcaaatttggaaggattgtttaataaatcagattttgatg 38969  T
Q  151 gcttttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaagattg 224  Q
    | ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| |||| |||||    
T  38968 gattttgtgggattttctagtgaaattttggcatgaaaaagtctttcatgaaaacatgagattccttaggattg 38895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 110; Significance: 2e-55; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 23 - 218
Target Start/End: Original strand, 100217 - 100412
Alignment:
Q  23 aagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaa 122  Q
    |||||||||||||||||       ||| ||||||| |||||||||||||||||||||||       ||||||||||||||||||||||||||||||| ||    
T  100217 aagattctttgtcatttaaaaaaagtcttgtggtactcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcaaa 100316  T
Q  123 ttattgtttaataaatcagattttgatggcttttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttctta 218  Q
      |||||||||||||||| |||||||||| ||||||||| |||||||||||||||||| || ||||||||||||||||||||||||| ||||||||    
T  100317 ggattgtttaataaatcaaattttgatggattttgtgggtttttctagtgaaattttaacaagaaaaagtctttcatgaaaacatgagatttctta 100412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0276 (Bit Score: 92; Significance: 1e-44; HSPs: 1)
Name: scaffold0276
Description:

Target: scaffold0276; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 51 - 223
Target Start/End: Complemental strand, 712 - 540
Alignment:
Q  51 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatg 150  Q
    |||||||||||||||| ||||||||||||||        | ||||||||||||||||||||||||||| |||  |||||||||||||||| |||||||||    
T  712 tgtggtattcaatcaaaactcttaatcacttaaattttttttagtggtattcaaaatcattcaaatttggaaggattgtttaataaatcatattttgatg 613  T
Q  151 gcttttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaagatt 223  Q
    | |||||||| |||||||||||||||||| | |||||||||||||| | |||||||||| |||||||| ||||    
T  612 gattttgtggaattttctagtgaaattttggtatgaaaaagtctttgacgaaaacatgagatttcttaggatt 540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 94 - 224
Target Start/End: Complemental strand, 58206 - 58076
Alignment:
Q  94 gtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatggcttttgtgggattttctagtgaaattttagcatgaaaaagtc 193  Q
    |||||||||||||||||||||||||||||| ||||||||||||||  ||||||||||| |||||||||||||| ||||  ||||||| || || ||| ||    
T  58206 gtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtataattttaacaagagaaaatc 58107  T
Q  194 tttcatgaaaacatgatatttcttaagattg 224  Q
    ||||||||||| |||| ||||||| ||||||    
T  58106 tttcatgaaaagatgagatttcttgagattg 58076  T

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Target: scaffold1504 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold1504
Description:

Target: scaffold1504; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 48 - 224
Target Start/End: Original strand, 894 - 1070
Alignment:
Q  48 tcatgtggtattcaatcaagactcttaatcacttnnnnnnn-gtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagatttt 146  Q
    ||||| ||||||||||||||||| || |||||||        |||| |||||||||||||||||||||||||||||  ||| |||||||||| |||||||    
T  894 tcatgaggtattcaatcaagacttttcatcacttaaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaagaattatttaataaat-agatttt 992  T
Q  147 gatggcttttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaagattg 224  Q
    ||||| |||||||||||||| ||||| ||||||| |  ||||||||||||||| |||| |||| ||||||| ||||||    
T  993 gatggattttgtgggattttgtagtgtaattttaactagaaaaagtctttcattaaaatatgagatttcttgagattg 1070  T

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Target: scaffold0054 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 96 - 224
Target Start/End: Complemental strand, 37035 - 36907
Alignment:
Q  96 ggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatggcttttgtgggattttctagtgaaattttagcatgaaaaagtctt 195  Q
    |||||||||||||||| ||||||||||  ||||||||||||||  ||||||||||| |||||||||||||| ||||| ||||||| || |||||||||||    
T  37035 ggtattcaaaatcattaaaatttcgaagcattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctt 36936  T
Q  196 tcatgaaaacatgatatttcttaagattg 224  Q
    ||||||||| || | ||||||| ||||||    
T  36935 tcatgaaaagataagatttcttgagattg 36907  T

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Target: scaffold0543 (Bit Score: 71; Significance: 4e-32; HSPs: 1)
Name: scaffold0543
Description:

Target: scaffold0543; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 94 - 224
Target Start/End: Original strand, 10637 - 10767
Alignment:
Q  94 gtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatggcttttgtgggattttctagtgaaattttagcatgaaaaagtc 193  Q
    |||||||||||||||||||||||||| ||  ||||||||||||||   |||||||||| |||| ||||||||| ||||| ||||||| || |||||||||    
T  10637 gtggtattcaaaatcattcaaatttcaaaggattgtttaataaattgaattttgatggattttatgggattttgtagtgtaattttaacaagaaaaagtc 10736  T
Q  194 tttcatgaaaacatgatatttcttaagattg 224  Q
    ||||||||||| |||| ||||||| ||||||    
T  10737 tttcatgaaaagatgagatttcttgagattg 10767  T

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Target: scaffold0110 (Bit Score: 71; Significance: 4e-32; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 94 - 224
Target Start/End: Complemental strand, 39747 - 39617
Alignment:
Q  94 gtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatggcttttgtgggattttctagtgaaattttagcatgaaaaagtc 193  Q
    |||||||||||||||||||||| ||||||  ||| ||||||||||  ||||||||||| |||||||||||||| ||||| ||||||| || |||||||||    
T  39747 gtggtattcaaaatcattcaaacttcgaaggattatttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtc 39648  T
Q  194 tttcatgaaaacatgatatttcttaagattg 224  Q
    ||||||||||| || | ||||||| ||||||    
T  39647 tttcatgaaaagataagatttcttgagattg 39617  T

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Target: scaffold0839 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0839
Description:

Target: scaffold0839; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 118 - 224
Target Start/End: Complemental strand, 3798 - 3692
Alignment:
Q  118 tcgaattattgtttaataaatcagattttgatggcttttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttctt 217  Q
    |||||| ||||||||||||||  ||||||||||| |||||||||||||| ||||| ||||||| || ||||| ||||||||| |||| || |||||| ||    
T  3798 tcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaggtctttcataaaaagattatatttttt 3699  T
Q  218 aagattg 224  Q
     ||||||    
T  3698 gagattg 3692  T

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Target: scaffold0347 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 153 - 224
Target Start/End: Original strand, 14896 - 14967
Alignment:
Q  153 ttttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaagattg 224  Q
    |||||||||||||| ||||| ||||||| || |||||||||||||||||||| |||| ||||||||||||||    
T  14896 ttttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttaagattg 14967  T

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Target: scaffold0306 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 54 - 158
Target Start/End: Original strand, 13919 - 14023
Alignment:
Q  54 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatggct 153  Q
    ||||||||||||||||| || |||||||       |||| |||||||||||||||||||||||||| ||  ||||||||||||||  ||||||||||| |    
T  13919 ggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcaaaagattgtttaataaattggattttgatggat 14018  T
Q  154 tttgt 158  Q
    |||||    
T  14019 tttgt 14023  T

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Target: scaffold0152 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 54 - 158
Target Start/End: Complemental strand, 21408 - 21304
Alignment:
Q  54 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatggct 153  Q
    ||||||||||||||||| || |||||||       |||| |||||||||||||||||||||||||| ||  ||||||||||||||  ||||||||||| |    
T  21408 ggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcaaaagattgtttaataaattggattttgatggat 21309  T
Q  154 tttgt 158  Q
    |||||    
T  21308 tttgt 21304  T

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Target: scaffold0922 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0922
Description:

Target: scaffold0922; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 54 - 151
Target Start/End: Original strand, 4237 - 4334
Alignment:
Q  54 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatgg 151  Q
    ||||||||||||||||| || |||| ||       |||| ||||||||||||||||||||||||| |||  ||||||||||||||  |||||||||||    
T  4237 ggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttgatgg 4334  T

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Target: scaffold0007 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 97 - 190
Target Start/End: Original strand, 199905 - 199998
Alignment:
Q  97 gtattcaaaatcattcaaatttcgaattattgtttaataaatcagattttgatggcttttgtgggattttctagtgaaattttagcatgaaaaa 190  Q
    ||||| |||||||||||||||| |||  | ||||||||||||   |||||||| | ||||||| |||||| |||||||| ||||| || |||||    
T  199905 gtatttaaaatcattcaaattttgaaagagtgtttaataaattgaattttgattgattttgtgagattttttagtgaaactttagtataaaaaa 199998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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