View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12659_high_10 (Length: 441)

Name: NF12659_high_10
Description: NF12659
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12659_high_10
NF12659_high_10
[»] chr7 (9 HSPs)
chr7 (19-431)||(30120095-30120507)
chr7 (149-319)||(30131210-30131380)
chr7 (26-217)||(30123949-30124141)
chr7 (173-291)||(28180503-28180624)
chr7 (352-431)||(30125141-30125220)
chr7 (358-431)||(28180363-28180436)
chr7 (356-430)||(30131096-30131170)
chr7 (352-431)||(30165661-30165740)
chr7 (375-431)||(28181022-28181078)
[»] chr5 (2 HSPs)
chr5 (19-349)||(29261129-29261459)
chr5 (50-90)||(29688021-29688061)
[»] scaffold1051 (1 HSPs)
scaffold1051 (165-318)||(1971-2121)
[»] chr2 (3 HSPs)
chr2 (178-319)||(21430104-21430244)
chr2 (153-321)||(21426387-21426551)
chr2 (356-427)||(21426586-21426657)
[»] chr4 (10 HSPs)
chr4 (50-91)||(48852573-48852614)
chr4 (48-92)||(48875754-48875798)
chr4 (48-91)||(48870450-48870493)
chr4 (48-91)||(48886136-48886179)
chr4 (53-91)||(48898632-48898670)
chr4 (46-91)||(45372193-45372238)
chr4 (50-91)||(49044320-49044361)
chr4 (54-91)||(50672412-50672449)
chr4 (253-281)||(45366194-45366222)
chr4 (47-91)||(48170704-48170748)
[»] chr8 (4 HSPs)
chr8 (235-280)||(43165016-43165061)
chr8 (352-431)||(41311187-41311266)
chr8 (356-428)||(43164868-43164940)
chr8 (19-91)||(43165169-43165241)
[»] chr3 (1 HSPs)
chr3 (54-91)||(47452031-47452068)


Alignment Details
Target: chr7 (Bit Score: 397; Significance: 0; HSPs: 9)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 397; E-Value: 0
Query Start/End: Original strand, 19 - 431
Target Start/End: Complemental strand, 30120507 - 30120095
Alignment:
Q  19 gtttgtgtttttgcactctgacaaaggcttctatctatggaatccatccaccggagtccacaaacaaatacctaggtcacctatgactattggaatcaag 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30120507 gtttgtgtttttgcactctgacaaaggcttctatctatggaatccatccaccggagtccacaaacaaatacctaggtcacctatgactattggaatcaag 30120408  T
Q  119 cttaatattctcaatcgcgatattttaaggtttttgtatggctttgcatacgaaccgtcaactgatgattacttggtagttttagggtcctataaatgct 218  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30120407 cttaatattctcaatcgcaatattttaaggtttttgtatggctttgcatacgaaccgtcaactgatgattacttggtagttttagggtcctataaatgct 30120308  T
Q  219 ataatgactatgatcgggtatctagtttgattaccttggagattttctcattgagagctaataggtggaaacaagttgaggttggttttcatttacctta 318  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||    
T  30120307 ataatgactatgatcgggtatctggtttgattaccttggagattttctcattgagaactaataagtggaaacaagttgaggttggttttcatttacctta 30120208  T
Q  319 tatggtaattaatactaatcgtccttccaacaaagttgggttgttcttgaatggggctattcattgggtggttcataatcatgagaccaacatgaatgtt 418  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30120207 tatggtaattaatactaatcgtccttccaacaaagttgggttgttcttgaatggggctattcattgggtggttcataatcatgagaccaacatgaatgtt 30120108  T
Q  419 attattgcctttg 431  Q
    |||||||||||||    
T  30120107 attattgcctttg 30120095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 149 - 319
Target Start/End: Complemental strand, 30131380 - 30131210
Alignment:
Q  149 tttttgtatggctttgcatacgaaccgtcaactgatgattacttggtagttttagggtcctataaatgctataatgactatgatcgggtatctagtttga 248  Q
    |||||||||||||| ||||| ||||| |||||||||||||||||||||||||||||||||||| ||||| || ||| |||||||||| |||||||||       
T  30131380 tttttgtatggcttggcatatgaaccatcaactgatgattacttggtagttttagggtcctatgaatgcgatgatggctatgatcggatatctagttcac 30131281  T
Q  249 ttaccttggagattttctcattgagagctaataggtggaaacaagttgaggttggttttcatttaccttat 319  Q
    ||  ||||| |||||||||||||||||||| ||| || |||||| || |||||| || |||||| ||||||    
T  30131280 ttgacttggggattttctcattgagagctattagctgaaaacaaattcaggttgcttctcatttgccttat 30131210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 26 - 217
Target Start/End: Complemental strand, 30124141 - 30123949
Alignment:
Q  26 tttttgcactctgacaaaggcttctatctatggaatccatccaccggagtccacaaacaaatacctaggtcacctatgactattggaatcaagcttaata 125  Q
    |||||||| |||||||||||||||||  ||||||||||||||||||||||| || | ||||||||||||||  |||| ||||||| | || | | |||||    
T  30124141 tttttgcagtctgacaaaggcttctagttatggaatccatccaccggagtctaccagcaaatacctaggtcttctataactattgtattcgatcataata 30124042  T
Q  126 ttctcaatcgcgatattttaaggtttttgtatggctttgcatacgaa-ccgtcaactgatgattacttggtagttttagggtcctataaatgc 217  Q
     || |||||   ||||| |   ||||||||||| |||||| |||||| |||| |||  ||||||||||||||||||| |||||||| ||||||    
T  30124041 atcccaatcataatattctcgtgtttttgtatgcctttgcttacgaacccgttaacatatgattacttggtagttttggggtcctacaaatgc 30123949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 173 - 291
Target Start/End: Complemental strand, 28180624 - 28180503
Alignment:
Q  173 ccgtcaactgatgattacttggtagttttagggtcctataaatgc---tataatgactatgatcgggtatctagtttgattaccttggagattttctcat 269  Q
    |||||||||||||||||||||||||||||||||||||||||||||    || ||| || ||||| |||||||||||  |||   || |||||||||||||    
T  28180624 ccgtcaactgatgattacttggtagttttagggtcctataaatgcggtgatgatggctttgatccggtatctagttcaattgaattagagattttctcat 28180525  T
Q  270 tgagagctaataggtggaaaca 291  Q
    |||||||||||| |||||||||    
T  28180524 tgagagctaataagtggaaaca 28180503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 352 - 431
Target Start/End: Complemental strand, 30125220 - 30125141
Alignment:
Q  352 agttgggttgttcttgaatggggctattcattgggtggttcataatcatgagaccaacatgaatgttattattgcctttg 431  Q
    |||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||| | |||||||| |||||||||    
T  30125220 agttgggttgttcttgaatgggactattcattggctggttcataatcatgagaccaacaaggatgttattgttgcctttg 30125141  T

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Target: chr7; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 358 - 431
Target Start/End: Complemental strand, 28180436 - 28180363
Alignment:
Q  358 gttgttcttgaatggggctattcattgggtggttcataatcatgagaccaacatgaatgttattattgcctttg 431  Q
    |||| |||| || ||||||||||||||| |||||||||||||||||||||| | |||||||||||||| |||||    
T  28180436 gttgctcttaaacggggctattcattggttggttcataatcatgagaccaagaggaatgttattattgtctttg 28180363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 356 - 430
Target Start/End: Complemental strand, 30131170 - 30131096
Alignment:
Q  356 gggttgttcttgaatggggctattcattgggtggttcataatcatgagaccaacatgaatgttattattgccttt 430  Q
    |||||||||||||||||||||||||||||| ||||| ||||| ||||||| |  | | |||||||||| ||||||    
T  30131170 gggttgttcttgaatggggctattcattggctggtttataattatgagacaagaagggatgttattatagccttt 30131096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 431
Target Start/End: Original strand, 30165661 - 30165740
Alignment:
Q  352 agttgggttgttcttgaatggggctattcattgggtggttcataatcatgagaccaacatgaatgttattattgcctttg 431  Q
    |||||||| |||||| |||||  ||||||||||| ||||| ||||| || ||||  | ||| ||||||||||||||||||    
T  30165661 agttgggtcgttcttcaatggttctattcattggctggtttataattatcagactgaaatggatgttattattgcctttg 30165740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 375 - 431
Target Start/End: Complemental strand, 28181078 - 28181022
Alignment:
Q  375 ctattcattgggtggttcataatcatgagaccaacatgaatgttattattgcctttg 431  Q
    ||||||||||| ||||| ||||| |||||||||| ||   |||||||||||||||||    
T  28181078 ctattcattggctggtttataattatgagaccaaaattggtgttattattgcctttg 28181022  T

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Target: chr5 (Bit Score: 275; Significance: 1e-153; HSPs: 2)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 275; E-Value: 1e-153
Query Start/End: Original strand, 19 - 349
Target Start/End: Original strand, 29261129 - 29261459
Alignment:
Q  19 gtttgtgtttttgcactctgacaaaggcttctatctatggaatccatccaccggagtccacaaacaaatacctaggtcacctatgactattggaatcaag 118  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  29261129 gtttgtgtttttgcactctgacaaaggcttctatctatggaatccatcaaccggagtccacaaacaaatacctagatcacctatgactattggaatcaag 29261228  T
Q  119 cttaatattctcaatcgcgatattttaaggtttttgtatggctttgcatacgaaccgtcaactgatgattacttggtagttttagggtcctataaatgct 218  Q
    |||||||||||||||| | |||||||||||||||| |||||||||||||| ||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  29261229 cttaatattctcaatcacaatattttaaggtttttctatggctttgcatatgaaccgtcaactgatgattacttcgtagttttaaggtcctataaatgct 29261328  T
Q  219 ataatgactatgatcgggtatctagtttgattaccttggagattttctcattgagagctaataggtggaaacaagttgaggttggttttcatttacctta 318  Q
    ||||||||||||||||||||||||| |||||| ||||||| |||||||||||||||||||||| || |||||||||||| ||||||||||||||||||||    
T  29261329 ataatgactatgatcgggtatctagattgattcccttggatattttctcattgagagctaataagtagaaacaagttgatgttggttttcatttacctta 29261428  T
Q  319 tatggtaattaatactaatcgtccttccaac 349  Q
    |||||||||||||||||||||||||||||||    
T  29261429 tatggtaattaatactaatcgtccttccaac 29261459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 50 - 90
Target Start/End: Original strand, 29688021 - 29688061
Alignment:
Q  50 tatctatggaatccatccaccggagtccacaaacaaatacc 90  Q
    |||||||||||||||||||||||||| |||| |||||||||    
T  29688021 tatctatggaatccatccaccggagttcacagacaaatacc 29688061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1051 (Bit Score: 44; Significance: 7e-16; HSPs: 1)
Name: scaffold1051
Description:

Target: scaffold1051; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 165 - 318
Target Start/End: Complemental strand, 2121 - 1971
Alignment:
Q  165 catacgaaccgtcaactgatgattacttggtagttttagggtcctataaatgctataatgactatgatcgggtatctagtttgattaccttggagatttt 264  Q
    |||| |||||||||||||||||||||||||||||||| |||| |||  ||| | || || ||| |     || |||| |||| | |  ||||||||||||    
T  2121 catatgaaccgtcaactgatgattacttggtagttttggggtactaccaatacgatgataacttttt---ggaatctggtttaactgacttggagatttt 2025  T
Q  265 ctcattgagagctaataggtggaaacaagttgaggttggttttcatttacctta 318  Q
    ||||||||||||||||| |||||||||| ||||| |||||| || ||| |||||    
T  2024 ctcattgagagctaataagtggaaacaaattgagtttggttctcctttgcctta 1971  T

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Target: chr2 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 3)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 178 - 319
Target Start/End: Original strand, 21430104 - 21430244
Alignment:
Q  178 aactgatgattacttggtagttttagggtcctataaatgctataatgactatgatcgggtatctagtttgattaccttggagattttctcattgagagct 277  Q
    |||||||||||||||||||||||| | ||||||  ||| | ||||| ||| |||   |||||||||||  |||  ||| |||||||||||||||||||||    
T  21430104 aactgatgattacttggtagttttcgagtcctacgaattcaataatcactctgagtcggtatctagttcaattgacttagagattttctcattgagagct 21430203  T
Q  278 aataggtggaaacaagttgaggttggttttcatttaccttat 319  Q
    |||   |||||| || ||||||||| || |||||| ||||||    
T  21430204 aatcaatggaaa-aaattgaggttgcttctcatttgccttat 21430244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 153 - 321
Target Start/End: Original strand, 21426387 - 21426551
Alignment:
Q  153 tgtatggctttgcatacgaaccgtcaactgatgattacttggtagttttagggtcctataaatgctataatgactatgatcgggtatctagtttgattac 252  Q
    |||||| ||| ||||||||||||||||    |||||||||||||||||| |||||||| |||    || || |||  || |  ||| ||||||  |||      
T  21426387 tgtatgccttggcatacgaaccgtcaa----tgattacttggtagttttggggtcctacaaagttgatgatcacttggagcctgtacctagttcaattga 21426482  T
Q  253 cttggagattttctcattgagagctaataggtggaaacaagttgaggttggttttcatttaccttatat 321  Q
    |||| |||||||||||||||||||| |||  ||||||||| ||||||||| || |||||| ||||||||    
T  21426483 cttgaagattttctcattgagagctcataaatggaaacaaattgaggttgcttctcatttgccttatat 21426551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 356 - 427
Target Start/End: Original strand, 21426586 - 21426657
Alignment:
Q  356 gggttgttcttgaatggggctattcattgggtggttcataatcatgagaccaacatgaatgttattattgcc 427  Q
    |||| |||||| |||||||||||||||||| |||||||||||  ||||||||||  | ||||||||||||||    
T  21426586 gggtcgttcttaaatggggctattcattggctggttcataattctgagaccaaccgggatgttattattgcc 21426657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 38; Significance: 0.000000000003; HSPs: 10)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 50 - 91
Target Start/End: Original strand, 48852573 - 48852614
Alignment:
Q  50 tatctatggaatccatccaccggagtccacaaacaaatacct 91  Q
    |||||||||||||||||||||||||| |||||||||||||||    
T  48852573 tatctatggaatccatccaccggagttcacaaacaaatacct 48852614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 48 - 92
Target Start/End: Original strand, 48875754 - 48875798
Alignment:
Q  48 tctatctatggaatccatccaccggagtccacaaacaaataccta 92  Q
    |||| ||||||||||||||||||||| | ||||||||||||||||    
T  48875754 tctacctatggaatccatccaccggatttcacaaacaaataccta 48875798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 48 - 91
Target Start/End: Original strand, 48870450 - 48870493
Alignment:
Q  48 tctatctatggaatccatccaccggagtccacaaacaaatacct 91  Q
    |||| ||||||||||||||||||||| | |||||||||||||||    
T  48870450 tctacctatggaatccatccaccggatttcacaaacaaatacct 48870493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 48 - 91
Target Start/End: Original strand, 48886136 - 48886179
Alignment:
Q  48 tctatctatggaatccatccaccggagtccacaaacaaatacct 91  Q
    |||| ||||||||||||||||||||| | |||||||||||||||    
T  48886136 tctacctatggaatccatccaccggatttcacaaacaaatacct 48886179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 53 - 91
Target Start/End: Original strand, 48898632 - 48898670
Alignment:
Q  53 ctatggaatccatccaccggagtccacaaacaaatacct 91  Q
    ||||||||||||||||||||||  |||||||||||||||    
T  48898632 ctatggaatccatccaccggagctcacaaacaaatacct 48898670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 46 - 91
Target Start/End: Complemental strand, 45372238 - 45372193
Alignment:
Q  46 cttctatctatggaatccatccaccggagtccacaaacaaatacct 91  Q
    |||||||||||||||||||||||| || || || ||||||||||||    
T  45372238 cttctatctatggaatccatccactggtgttcagaaacaaatacct 45372193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 50 - 91
Target Start/End: Complemental strand, 49044361 - 49044320
Alignment:
Q  50 tatctatggaatccatccaccggagtccacaaacaaatacct 91  Q
    ||||||||||||||||||||  |||| |||||||||||||||    
T  49044361 tatctatggaatccatccactagagttcacaaacaaatacct 49044320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 54 - 91
Target Start/End: Original strand, 50672412 - 50672449
Alignment:
Q  54 tatggaatccatccaccggagtccacaaacaaatacct 91  Q
    |||||||||||||||| ||||| |||||||||||||||    
T  50672412 tatggaatccatccacaggagttcacaaacaaatacct 50672449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 253 - 281
Target Start/End: Complemental strand, 45366222 - 45366194
Alignment:
Q  253 cttggagattttctcattgagagctaata 281  Q
    |||||||||||||||||||||||||||||    
T  45366222 cttggagattttctcattgagagctaata 45366194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 47 - 91
Target Start/End: Complemental strand, 48170748 - 48170704
Alignment:
Q  47 ttctatctatggaatccatccaccggagtccacaaacaaatacct 91  Q
    ||||| |||||||||||||||||| |||| || ||||||||||||    
T  48170748 ttctacctatggaatccatccacccgagttcataaacaaatacct 48170704  T

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Target: chr8 (Bit Score: 34; Significance: 0.0000000006; HSPs: 4)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 235 - 280
Target Start/End: Complemental strand, 43165061 - 43165016
Alignment:
Q  235 ggtatctagtttgattaccttggagattttctcattgagagctaat 280  Q
    ||||||||||| ||||  ||||||||||||||||||||||||||||    
T  43165061 ggtatctagttcgattgacttggagattttctcattgagagctaat 43165016  T

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Target: chr8; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 431
Target Start/End: Complemental strand, 41311266 - 41311187
Alignment:
Q  352 agttgggttgttcttgaatggggctattcattgggtggttcataatcatgagaccaacatgaatgttattattgcctttg 431  Q
    |||||||| ||||||||||||  ||||||||||| ||||| || || || ||||  | ||| ||||||||||||||||||    
T  41311266 agttgggtcgttcttgaatggttctattcattggctggtttatgatgataagactgaaatggatgttattattgcctttg 41311187  T

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Target: chr8; HSP #3
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 356 - 428
Target Start/End: Complemental strand, 43164940 - 43164868
Alignment:
Q  356 gggttgttcttgaatggggctattcattgggtggttcataatcatgagaccaacatgaatgttattattgcct 428  Q
    |||| ||||||||||||  ||||||||||| ||||| ||||| |||||||  | ||  |||||||||||||||    
T  43164940 gggtcgttcttgaatggttctattcattggctggtttataattatgagactgaaatagatgttattattgcct 43164868  T

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Target: chr8; HSP #4
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 91
Target Start/End: Complemental strand, 43165241 - 43165169
Alignment:
Q  19 gtttgtgtttttgcactctgacaaaggcttctatctatggaatccatccaccggagtccacaaacaaatacct 91  Q
    |||| |||||||  ||||| ||| || ||||||  |||||||||||||||| ||  |||||||||||||||||    
T  43165241 gtttctgtttttaaactcttacagagacttctacatatggaatccatccacaggcatccacaaacaaatacct 43165169  T

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Target: chr3 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 54 - 91
Target Start/End: Complemental strand, 47452068 - 47452031
Alignment:
Q  54 tatggaatccatccaccggagtccacaaacaaatacct 91  Q
    |||||||||||||||| ||||| |||||||||||||||    
T  47452068 tatggaatccatccactggagttcacaaacaaatacct 47452031  T

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