View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12659_high_28 (Length: 253)
Name: NF12659_high_28
Description: NF12659
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12659_high_28 |
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Alignment Details
Target: chr4 (Bit Score: 226; Significance: 1e-125; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 226; E-Value: 1e-125
Query Start/End: Original strand, 1 - 234
Target Start/End: Original strand, 36684684 - 36684917
Alignment:
| Q |
1 |
acttttttatacaacccaaatcctttaccacaatttcattgggaagctagatggctttggactgttcgattaagagagaaattttttaagattatgagag |
100 |
Q |
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| T |
36684684 |
acttttttatacaacccaaatcctttaccacaatttcattgggaagctagatggctttggactgttcgattaagagagaaaatttttaagattatgagag |
36684783 |
T |
|
| Q |
101 |
atcctctataatctaacggggtcttctgcatcgtaaagccaaatgtagagaatttaatttgtgttttatagacttttttaaatcttcttttaatatcgat |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36684784 |
atcctctataatctaacggggtcttctgcatcgtaaagccaaatgtagagaatttaatttgtgttttatagacttttttaaatcttcttttaatatcgat |
36684883 |
T |
|
| Q |
201 |
ctaaaccatcacggctcattaagttagtcccttt |
234 |
Q |
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|||||| ||||||||||||||||||||||||||| |
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| T |
36684884 |
ctaaactatcacggctcattaagttagtcccttt |
36684917 |
T |
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