View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1265_low_36 (Length: 250)
Name: NF1265_low_36
Description: NF1265
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1265_low_36 |
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Alignment Details
Target: chr3 (Bit Score: 154; Significance: 9e-82; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 154; E-Value: 9e-82
Query Start/End: Original strand, 1 - 166
Target Start/End: Original strand, 2441050 - 2441215
Alignment:
| Q |
1 |
atatatatatactttcattaaccttgctgtgtagtatcattatgatggtggaattgactgccattaacaagcagctcttgtgtgtcctccctcccttaag |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| |
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| T |
2441050 |
atatatatatactttcattaaccttgctgtgtagtatcattatgatggtggaattgactgccattaacaagcagttcttgtgtgtcctccctaccttaag |
2441149 |
T |
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| Q |
101 |
ctcttctggccattcactttacgacccgccacttcctacgcttccgtttgatttggtggcagagat |
166 |
Q |
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||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2441150 |
ctcttctggccattcactttatgacccgccacttcctacgcttccgtttgatttggtggcagagat |
2441215 |
T |
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