View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF12660_high_29 (Length: 254)
Name: NF12660_high_29
Description: NF12660
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12660_high_29 |
 | |
|
| [»] scaffold0477 (1 HSPs) |
| |
|
| [»] scaffold0288 (1 HSPs) |
| | |
|
| [»] chr3 (1 HSPs) |
| |
|
| [»] scaffold0475 (1 HSPs) |
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Alignment Details
Target: scaffold0477 (Bit Score: 197; Significance: 1e-107; HSPs: 1)
Name: scaffold0477
Description:
Target: scaffold0477; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 18 - 254
Target Start/End: Original strand, 4247 - 4483
Alignment:
| Q |
18 |
aggaacctgagtcggttgtttatgtgaattttggaagcattacagttatgactccagatcaactgttagagtttgcttggggtttgaccaattgtaagaa |
117 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
4247 |
aggaacctgagtcggttgtttatgtgaattttggaagcattacagttatgactccagatcaactgttagagtttgcttgggttttgaccaattgtaagaa |
4346 |
T |
|
| Q |
118 |
atcctttttgtggatcattaggcctgaccttgtcattggcggctcgtttattttgtcatctgagtttgagaatgaaatttcagatagaggcctaattgtg |
217 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
4347 |
atcctttttgtggatcattaggcctgaccttgtcattggcggctcgtttattttgtcatctgagtttgagaatgaaatttcagatagaggcctaattgcg |
4446 |
T |
|
| Q |
218 |
ggttggtgctcgcaagagaaagtattgaaccatcctt |
254 |
Q |
| |
|
| ||||| | |||||| ||||| ||||||| |||| |
|
|
| T |
4447 |
agctggtgtccacaagagcaagtactgaaccaccctt |
4483 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0288 (Bit Score: 140; Significance: 2e-73; HSPs: 1)
Name: scaffold0288
Description:
Target: scaffold0288; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 18 - 213
Target Start/End: Original strand, 3280 - 3475
Alignment:
| Q |
18 |
aggaacctgagtcggttgtttatgtgaattttggaagcattacagttatgactccagatcaactgttagagtttgcttggggtttgaccaattgtaagaa |
117 |
Q |
| |
|
||||||||||||| ||||||||||||||||| || ||||||||||||||||||||| ||||||||||||| ||||||||||||||| || || | ||||| |
|
|
| T |
3280 |
aggaacctgagtctgttgtttatgtgaatttcggcagcattacagttatgactccaaatcaactgttagaatttgcttggggtttggccgatagcaagaa |
3379 |
T |
|
| Q |
118 |
atcctttttgtggatcattaggcctgaccttgtcattggcggctcgtttattttgtcatctgagtttgagaatgaaatttcagatagaggcctaat |
213 |
Q |
| |
|
| | ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||| |
|
|
| T |
3380 |
accgtttttgtggatcattaggcctgatcttgtcattggcggctcgtttattttgtcatcagaatttgagaatgaaatttcagatagaggcctaat |
3475 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 136; Significance: 5e-71; HSPs: 30)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 29 - 212
Target Start/End: Original strand, 4299393 - 4299576
Alignment:
| Q |
29 |
tcggttgtttatgtgaattttggaagcattacagttatgactccagatcaactgttagagtttgcttggggtttgaccaattgtaagaaatcctttttgt |
128 |
Q |
| |
|
||||||||||||||||||||||| ||| ||||||||||||||||||| |||||||||||| |||||||||||||| ||||||| | |||| | ||||||| |
|
|
| T |
4299393 |
tcggttgtttatgtgaattttggcagcgttacagttatgactccagagcaactgttagagattgcttggggtttggccaattgcaggaaaccatttttgt |
4299492 |
T |
|
| Q |
129 |
ggatcattaggcctgaccttgtcattggcggctcgtttattttgtcatctgagtttgagaatgaaatttcagatagaggcctaa |
212 |
Q |
| |
|
||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
4299493 |
ggatcattaggccagaccttgtcattggcggcttgtttattttgtcatctgagtttgagaatgaaatttcaaatagaggcctaa |
4299576 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 18 - 249
Target Start/End: Original strand, 4259715 - 4259946
Alignment:
| Q |
18 |
aggaacctgagtcggttgtttatgtgaattttggaagcattacagttatgactccagatcaactgttagagtttgcttggggtttgaccaattgtaagaa |
117 |
Q |
| |
|
||||||||||||| |||||||| ||||||||||| ||||||||||||||||||||||||||| | ||||||||||||||||| ||| ||||| | ||||| |
|
|
| T |
4259715 |
aggaacctgagtctgttgtttacgtgaattttggcagcattacagttatgactccagatcaatttttagagtttgcttggggattggccaatagcaagaa |
4259814 |
T |
|
| Q |
118 |
atcctttttgtggatcattaggcctgaccttgtcattggcggctcgtttattttgtcatctgagtttgagaatgaaatttcagatagaggcctaattgtg |
217 |
Q |
| |
|
| |||||||||||||||||||||||||||| | ||||| ||||| ||||||||||||||||||||||||| ||||||||| |||||||||||||| | | |
|
|
| T |
4259815 |
accctttttgtggatcattaggcctgacctcattattggtggctcctttattttgtcatctgagtttgagagtgaaatttcggatagaggcctaatcgcg |
4259914 |
T |
|
| Q |
218 |
ggttggtgctcgcaagagaaagtattgaacca |
249 |
Q |
| |
|
| ||||| |||||||| ||||| ||||||| |
|
|
| T |
4259915 |
agctggtgtccgcaagagcaagtactgaacca |
4259946 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 33 - 213
Target Start/End: Complemental strand, 4622698 - 4622518
Alignment:
| Q |
33 |
ttgtttatgtgaattttggaagcattacagttatgactccagatcaactgttagagtttgcttggggtttgaccaattgtaagaaatcctttttgtggat |
132 |
Q |
| |
|
||||||| ||||||||||| ||||||||||| ||||||| ||||||||| ||||||||||||||||||||| | || | |||||| ||||||||||||| |
|
|
| T |
4622698 |
ttgtttacgtgaattttggcagcattacagtgatgactcgagatcaactattagagtttgcttggggtttggctgatagcaagaaaccctttttgtggat |
4622599 |
T |
|
| Q |
133 |
cattaggcctgaccttgtcattggcggctcgtttattttgtcatctgagtttgagaatgaaatttcagatagaggcctaat |
213 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
4622598 |
cattaggcctgaccttgtcatgggcggctcgtttattttgtcatctgagtttgagaatgaaatttcaggtagaggcctaat |
4622518 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 32 - 254
Target Start/End: Complemental strand, 4461680 - 4461458
Alignment:
| Q |
32 |
gttgtttatgtgaattttggaagcattacagttatgactccagatcaactgttagagtttgcttggggtttgaccaattgtaagaaatcctttttgtgga |
131 |
Q |
| |
|
||||| ||||| |||||||| ||||| |||||||||||||| |||||||||||||||||||||||||||||| | || | |||||| ||||||| |||| |
|
|
| T |
4461680 |
gttgtctatgtaaattttggcagcatcacagttatgactcctgatcaactgttagagtttgcttggggtttggctgatagcaagaaaccctttttatgga |
4461581 |
T |
|
| Q |
132 |
tcattaggcctgaccttgtcattggcggctcgtttattttgtcatctgagtttgagaatgaaatttcagatagaggcctaattgtgggttggtgctcgca |
231 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| | | ||||| |||| |
|
|
| T |
4461580 |
tcattaggcctgatcttgtcattggcggctcgtttattttgtcatctgagtttgtgaatgaaatttcagatagaggcctaatagcaagctggtgtccgca |
4461481 |
T |
|
| Q |
232 |
agagaaagtattgaaccatcctt |
254 |
Q |
| |
|
|||| ||||| ||||||| |||| |
|
|
| T |
4461480 |
agagcaagtactgaaccaccctt |
4461458 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 32 - 254
Target Start/End: Complemental strand, 4564268 - 4564046
Alignment:
| Q |
32 |
gttgtttatgtgaattttggaagcattacagttatgactccagatcaactgttagagtttgcttggggtttgaccaattgtaagaaatcctttttgtgga |
131 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| ||| | |||||||| || ||||||||||| ||| ||||||| || ||| |||||||||||| |
|
|
| T |
4564268 |
gttgtttatgtgaattttggaagcattacagttatgacaccaaaacaactgttggaatttgcttgggggttggccaattgcaataaaccctttttgtgga |
4564169 |
T |
|
| Q |
132 |
tcattaggcctgaccttgtcattggcggctcgtttattttgtcatctgagtttgagaatgaaatttcagatagaggcctaattgtgggttggtgctcgca |
231 |
Q |
| |
|
||||||||||||||||||||||||| ||||| | |||||||||||||||||| |||||||||||||||||||||| |||||| ||||||| | || |
|
|
| T |
4564168 |
tcattaggcctgaccttgtcattggtggctcagtcgttttgtcatctgagtttgtgaatgaaatttcagatagaggcttaattgcaagttggtgtccaca |
4564069 |
T |
|
| Q |
232 |
agagaaagtattgaaccatcctt |
254 |
Q |
| |
|
||||||||||||||||| |||| |
|
|
| T |
4564068 |
ggagaaagtattgaaccaccctt |
4564046 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 32 - 254
Target Start/End: Complemental strand, 4571529 - 4571307
Alignment:
| Q |
32 |
gttgtttatgtgaattttggaagcattacagttatgactccagatcaactgttagagtttgcttggggtttgaccaattgtaagaaatcctttttgtgga |
131 |
Q |
| |
|
|||||||||||||||||||| |||| |||||||||||| |||| |||||||||||||||| |||||||| | ||| | ||| || ||||||||||| |
|
|
| T |
4571529 |
gttgtttatgtgaattttgggagcaggacagttatgacttcagaaaaactgttagagtttgcatggggtttagcaaatagcaagcaactctttttgtgga |
4571430 |
T |
|
| Q |
132 |
tcattaggcctgaccttgtcattggcggctcgtttattttgtcatctgagtttgagaatgaaatttcagatagaggcctaattgtgggttggtgctcgca |
231 |
Q |
| |
|
|||||||||| || ||||||||||| ||||| || |||||||||| ||||||| ||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
4571429 |
tcattaggcccgatcttgtcattggtggctcagttgttttgtcatcggagtttgtgaatgaaatttcagatagaggcctaattgctggttggtgctcgca |
4571330 |
T |
|
| Q |
232 |
agagaaagtattgaaccatcctt |
254 |
Q |
| |
|
||||||||||||||||||||||| |
|
|
| T |
4571329 |
agagaaagtattgaaccatcctt |
4571307 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 18 - 254
Target Start/End: Complemental strand, 4626522 - 4626286
Alignment:
| Q |
18 |
aggaacctgagtcggttgtttatgtgaattttggaagcattacagttatgactccagatcaactgttagagtttgcttggggtttgaccaattgtaagaa |
117 |
Q |
| |
|
||||||| |||| |||||||||||||| ||||| ||| ||| ||||||||||||| | |||||||||||||||||||||||||| | || | ||||| |
|
|
| T |
4626522 |
aggaaccaaagtctgttgtttatgtgaactttggcagcgttatagttatgactccacagaaactgttagagtttgcttggggtttggctgatagcaagaa |
4626423 |
T |
|
| Q |
118 |
atcctttttgtggatcattaggcctgaccttgtcattggcggctcgtttattttgtcatctgagtttgagaatgaaatttcagatagaggcctaattgtg |
217 |
Q |
| |
|
| ||||||||||||||||||||||||| ||||| ||||| ||||| ||||||| |||||| ||||||||||||||||||||||||||||||||||| | |
|
|
| T |
4626422 |
accctttttgtggatcattaggcctgatcttgtgattggtggctcatttatttcgtcatccgagtttgagaatgaaatttcagatagaggcctaatcgca |
4626323 |
T |
|
| Q |
218 |
ggttggtgctcgcaagagaaagtattgaaccatcctt |
254 |
Q |
| |
|
| ||||| |||||||||||||| |||||||||||| |
|
|
| T |
4626322 |
agctggtgtccgcaagagaaagtactgaaccatcctt |
4626286 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 18 - 184
Target Start/End: Original strand, 4256185 - 4256351
Alignment:
| Q |
18 |
aggaacctgagtcggttgtttatgtgaattttggaagcattacagttatgactccagatcaactgttagagtttgcttggggtttgaccaattgtaagaa |
117 |
Q |
| |
|
||||||||||||| |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| | ||||| |
|
|
| T |
4256185 |
aggaacctgagtctgttgtttacgtgaattttggcagcattacagttatgactccagatcaactgttagagtttgcttggggattggccaatagcaagaa |
4256284 |
T |
|
| Q |
118 |
atcctttttgtggatcattaggcctgaccttgtcattggcggctcgtttattttgtcatctgagttt |
184 |
Q |
| |
|
| | |||||||| ||||||||||||||||| |||||||| ||||| ||||||||||||||||||||| |
|
|
| T |
4256285 |
accatttttgtgtatcattaggcctgacctcgtcattggtggctcctttattttgtcatctgagttt |
4256351 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 35 - 254
Target Start/End: Complemental strand, 4516875 - 4516656
Alignment:
| Q |
35 |
gtttatgtgaattttggaagcattacagttatgactccagatcaactgttagagtttgcttggggtttgaccaattgtaagaaatcctttttgtggatca |
134 |
Q |
| |
|
||||||||||||||||||||||| || || |||||||||||||||||||||||||| |||||||||||| |||| | |||||| | ||||||||||| | |
|
|
| T |
4516875 |
gtttatgtgaattttggaagcatcacggtcatgactccagatcaactgttagagttcgcttggggtttggccaacagcaagaaaccttttttgtggatta |
4516776 |
T |
|
| Q |
135 |
ttaggcctgaccttgtcattggcggctcgtttattttgtcatctgagtttgagaatgaaatttcagatagaggcctaattgtgggttggtgctcgcaaga |
234 |
Q |
| |
|
|||||||||||||||||||||| |||||| ||||||||||||| || |||| |||||||| ||| ||||||||| |||| | | ||||| ||||||| |
|
|
| T |
4516775 |
ttaggcctgaccttgtcattggtggctcggttattttgtcatccgattttgtgaatgaaacttcggatagaggcgtaatagcaagctggtgtccgcaaga |
4516676 |
T |
|
| Q |
235 |
gaaagtattgaaccatcctt |
254 |
Q |
| |
|
|||||| ||||||||||||| |
|
|
| T |
4516675 |
gaaagtgttgaaccatcctt |
4516656 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 32 - 254
Target Start/End: Complemental strand, 4586193 - 4585971
Alignment:
| Q |
32 |
gttgtttatgtgaattttggaagcattacagttatgactccagatcaactgttagagtttgcttggggtttgaccaattgtaagaaatcctttttgtgga |
131 |
Q |
| |
|
|||||||||||||||||||| |||| |||||||||||| |||| |||| ||||||||||||||||||||| ||||| | ||| || ||||| |||| |
|
|
| T |
4586193 |
gttgtttatgtgaattttgggagcacaacagttatgactacagaaaaactattagagtttgcttggggtttggccaatagcaagcaacattttttatgga |
4586094 |
T |
|
| Q |
132 |
tcattaggcctgaccttgtcattggcggctcgtttattttgtcatctgagtttgagaatgaaatttcagatagaggcctaattgtgggttggtgctcgca |
231 |
Q |
| |
|
||||||| ||||| ||||||||||| || || || ||||||||||||||||| |||||||||||||||||||||||||||| | |||||||||| |||| |
|
|
| T |
4586093 |
tcattagacctgatcttgtcattggtggttccttggttttgtcatctgagtttaagaatgaaatttcagatagaggcctaatcgcgggttggtgcccgca |
4585994 |
T |
|
| Q |
232 |
agagaaagtattgaaccatcctt |
254 |
Q |
| |
|
|||| ||||||||||||| |||| |
|
|
| T |
4585993 |
agagcaagtattgaaccaccctt |
4585971 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 18 - 254
Target Start/End: Original strand, 4613279 - 4613515
Alignment:
| Q |
18 |
aggaacctgagtcggttgtttatgtgaattttggaagcattacagttatgactccagatcaactgttagagtttgcttggggtttgaccaattgtaagaa |
117 |
Q |
| |
|
||||||| |||| |||||||||||||||||||| ||||| || ||||||||| |||| |||| ||||||||||||||||||||| | ||| | ||| | |
|
|
| T |
4613279 |
aggaaccgaagtccgttgtttatgtgaattttgggagcatgaccgttatgactgcagaaaaactattagagtttgcttggggtttggcgaatagcaagca |
4613378 |
T |
|
| Q |
118 |
atcctttttgtggatcattaggcctgaccttgtcattggcggctcgtttattttgtcatctgagtttgagaatgaaatttcagatagaggcctaattgtg |
217 |
Q |
| |
|
| ||||||||||||||||||||||||| ||||||||||||||||| || |||||||||| ||||||| ||||||||||||||||||||||||||| | | |
|
|
| T |
4613379 |
accctttttgtggatcattaggcctgatcttgtcattggcggctcagttgttttgtcatcagagtttgtgaatgaaatttcagatagaggcctaatcgcg |
4613478 |
T |
|
| Q |
218 |
ggttggtgctcgcaagagaaagtattgaaccatcctt |
254 |
Q |
| |
|
| ||||| | |||||| ||||||| ||||| |||| |
|
|
| T |
4613479 |
agctggtgtcctcaagagcaagtattaaaccaccctt |
4613515 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 32 - 254
Target Start/End: Complemental strand, 3172298 - 3172076
Alignment:
| Q |
32 |
gttgtttatgtgaattttggaagcattacagttatgactccagatcaactgttagagtttgcttggggtttgaccaattgtaagaaatcctttttgtgga |
131 |
Q |
| |
|
||||||||||| |||||||| ||||| | ||||||| ||| ||| || | |||||||||||||||||||| |||| | |||||| |||||||||||| |
|
|
| T |
3172298 |
gttgtttatgtaaattttggcagcatcatagttatgtctcaagagaaattattagagtttgcttggggtttagccaacagcaagaaaccctttttgtgga |
3172199 |
T |
|
| Q |
132 |
tcattaggcctgaccttgtcattggcggctcgtttattttgtcatctgagtttgagaatgaaatttcagatagaggcctaattgtgggttggtgctcgca |
231 |
Q |
| |
|
| ||||||||||| ||||||||||| |||||| || |||||||||| ||||||| ||||||||||||||||||||||||||| | ||||||| |||| |
|
|
| T |
3172198 |
ttattaggcctgatcttgtcattggtggctcggttgttttgtcatcggagtttgtgaatgaaatttcagatagaggcctaatagcaagttggtgtccgca |
3172099 |
T |
|
| Q |
232 |
agagaaagtattgaaccatcctt |
254 |
Q |
| |
|
||||||||| ||||||||||||| |
|
|
| T |
3172098 |
agagaaagtgttgaaccatcctt |
3172076 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 32 - 254
Target Start/End: Complemental strand, 4557682 - 4557460
Alignment:
| Q |
32 |
gttgtttatgtgaattttggaagcattacagttatgactccagatcaactgttagagtttgcttggggtttgaccaattgtaagaaatcctttttgtgga |
131 |
Q |
| |
|
|||||||||||||||||||| ||||| ||||||||||| |||| |||||||||||||||| |||||||| | ||| | ||| || |||||||||||| |
|
|
| T |
4557682 |
gttgtttatgtgaattttgggagcatgacagttatgacggcagaaaaactgttagagtttgcatggggtttagcaaatagcaagcaaccctttttgtgga |
4557583 |
T |
|
| Q |
132 |
tcattaggcctgaccttgtcattggcggctcgtttattttgtcatctgagtttgagaatgaaatttcagatagaggcctaattgtgggttggtgctcgca |
231 |
Q |
| |
|
|||||||||| || |||||||| || ||||| || |||||||||| ||||||| |||||||||||||||||||||||||| | ||| |||||| |||| |
|
|
| T |
4557582 |
tcattaggcccgatcttgtcatcggtggctcagttgttttgtcatcggagtttgtcaatgaaatttcagatagaggcctaatcgcgggctggtgcccgca |
4557483 |
T |
|
| Q |
232 |
agagaaagtattgaaccatcctt |
254 |
Q |
| |
|
|||| ||||||| |||||||||| |
|
|
| T |
4557482 |
agagcaagtattaaaccatcctt |
4557460 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 32 - 254
Target Start/End: Complemental strand, 4598728 - 4598506
Alignment:
| Q |
32 |
gttgtttatgtgaattttggaagcattacagttatgactccagatcaactgttagagtttgcttggggtttgaccaattgtaagaaatcctttttgtgga |
131 |
Q |
| |
|
|||||||||||||||||||| ||||| || || |||||| |||| | ||||||| ||||||||||||||| ||||| | |||||| |||||||||||| |
|
|
| T |
4598728 |
gttgtttatgtgaattttgggagcataacggtgatgactgcagaaaagttgttagactttgcttggggtttggccaatagcaagaaaccctttttgtgga |
4598629 |
T |
|
| Q |
132 |
tcattaggcctgaccttgtcattggcggctcgtttattttgtcatctgagtttgagaatgaaatttcagatagaggcctaattgtgggttggtgctcgca |
231 |
Q |
| |
|
||||||||||||| ||||||||||| |||||| || |||||||||| ||||||| |||||||||||||||||||||| || ||| | ||||| ||| |
|
|
| T |
4598628 |
tcattaggcctgatcttgtcattggtggctcggttgttttgtcatcggagtttgtgaatgaaatttcagatagaggcttagttgcaagctggtgtctgca |
4598529 |
T |
|
| Q |
232 |
agagaaagtattgaaccatcctt |
254 |
Q |
| |
|
|||| ||||||| |||||||||| |
|
|
| T |
4598528 |
agagcaagtattaaaccatcctt |
4598506 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 32 - 254
Target Start/End: Complemental strand, 4602346 - 4602124
Alignment:
| Q |
32 |
gttgtttatgtgaattttggaagcattacagttatgactccagatcaactgttagagtttgcttggggtttgaccaattgtaagaaatcctttttgtgga |
131 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||||| || ||||| | ||||| || |||||||||||| ||||||| | ||| | |||||||||| |
|
|
| T |
4602346 |
gttgtttatgtgaattttggcagcattacagttatgacaccccatcaattattagaattcgcttggggtttggccaattgccataaaccatttttgtgga |
4602247 |
T |
|
| Q |
132 |
tcattaggcctgaccttgtcattggcggctcgtttattttgtcatctgagtttgagaatgaaatttcagatagaggcctaattgtgggttggtgctcgca |
231 |
Q |
| |
|
||||||||||||| ||||||||||| ||||| | |||||||||||||||||| |||||||||||||||||||||||||| | ||||||| | || |
|
|
| T |
4602246 |
tcattaggcctgatcttgtcattggtggctcagtgattttgtcatctgagtttacaaatgaaatttcagatagaggcctaatagcaagttggtgtccaca |
4602147 |
T |
|
| Q |
232 |
agagaaagtattgaaccatcctt |
254 |
Q |
| |
|
||||||||| |||||||| |||| |
|
|
| T |
4602146 |
agagaaagtgttgaaccaccctt |
4602124 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 18 - 254
Target Start/End: Complemental strand, 4580003 - 4579767
Alignment:
| Q |
18 |
aggaacctgagtcggttgtttatgtgaattttggaagcattacagttatgactccagatcaactgttagagtttgcttggggtttgaccaattgtaagaa |
117 |
Q |
| |
|
|||||||| ||| |||||||||||||||||||| ||| | |||||||||||| |||| |||||||||||||||| |||||||| | ||| | ||| | |
|
|
| T |
4580003 |
aggaacctaggtctgttgtttatgtgaattttgggagcttgacagttatgactgcagaaaaactgttagagtttgcatggggtttagcaaatagcaagca |
4579904 |
T |
|
| Q |
118 |
atcctttttgtggatcattaggcctgaccttgtcattggcggctcgtttattttgtcatctgagtttgagaatgaaatttcagatagaggcctaattgtg |
217 |
Q |
| |
|
| |||||||||||||||||||||| || |||||||| |||||||| | |||||||||| ||||||| ||||||||||||||||||||||||||| | |
|
|
| T |
4579903 |
accctttttgtggatcattaggcccgatcttgtcatcggcggctcagctgttttgtcatcggagtttgtgaatgaaatttcagatagaggcctaataacg |
4579804 |
T |
|
| Q |
218 |
ggttggtgctcgcaagagaaagtattgaaccatcctt |
254 |
Q |
| |
|
| ||||| |||||||| ||||| ||||||| |||| |
|
|
| T |
4579803 |
agctggtgtccgcaagagcaagtactgaaccaccctt |
4579767 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 32 - 254
Target Start/End: Original strand, 4514696 - 4514918
Alignment:
| Q |
32 |
gttgtttatgtgaattttggaagcattacagttatgactccagatcaactgttagagtttgcttggggtttgaccaattgtaagaaatcctttttgtgga |
131 |
Q |
| |
|
||||||||||| |||||||| ||||| || ||||| |||| || || ||||||||||||||||||||||| ||||| | |||||| ||||||| |||| |
|
|
| T |
4514696 |
gttgtttatgttaattttggtagcatcacgattatgtctccggagaaattgttagagtttgcttggggtttggccaatagcaagaaaacctttttatgga |
4514795 |
T |
|
| Q |
132 |
tcattaggcctgaccttgtcattggcggctcgtttattttgtcatctgagtttgagaatgaaatttcagatagaggcctaattgtgggttggtgctcgca |
231 |
Q |
| |
|
||||||||||||| ||||||||||| ||||| | ||||||| |||||||||| |||||||||| |||||||||||||||| | ||||||| | || |
|
|
| T |
4514796 |
tcattaggcctgatcttgtcattggtggctcagtggttttgtcgtctgagtttgtgaatgaaattgcagatagaggcctaatagcaagttggtgtccaca |
4514895 |
T |
|
| Q |
232 |
agagaaagtattgaaccatcctt |
254 |
Q |
| |
|
||||||||| |||||||| |||| |
|
|
| T |
4514896 |
agagaaagttttgaaccaccctt |
4514918 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 32 - 254
Target Start/End: Complemental strand, 4592788 - 4592566
Alignment:
| Q |
32 |
gttgtttatgtgaattttggaagcattacagttatgactccagatcaactgttagagtttgcttggggtttgaccaattgtaagaaatcctttttgtgga |
131 |
Q |
| |
|
||||||||||||||||| || ||| |||||||||||| | ||| || ||||||||||||||||||||||| ||||||| || ||| | |||||||||| |
|
|
| T |
4592788 |
gttgtttatgtgaatttcggcagccttacagttatgaatgaagagaaaatgttagagtttgcttggggtttggccaattgcaataaaccttttttgtgga |
4592689 |
T |
|
| Q |
132 |
tcattaggcctgaccttgtcattggcggctcgtttattttgtcatctgagtttgagaatgaaatttcagatagaggcctaattgtgggttggtgctcgca |
231 |
Q |
| |
|
||||||||||||| ||||||||||| ||| | || |||||||||| ||||||| |||||||||||||||||||||| |||| | | | ||||| | || |
|
|
| T |
4592688 |
tcattaggcctgatcttgtcattggtggcacaattgttttgtcatcggagtttgtgaatgaaatttcagatagaggcgtaatcgcgagctggtgtcctca |
4592589 |
T |
|
| Q |
232 |
agagaaagtattgaaccatcctt |
254 |
Q |
| |
|
|||| ||||||| ||||| |||| |
|
|
| T |
4592588 |
agagcaagtattaaaccaccctt |
4592566 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 32 - 254
Target Start/End: Complemental strand, 4617579 - 4617357
Alignment:
| Q |
32 |
gttgtttatgtgaattttggaagcattacagttatgactccagatcaactgttagagtttgcttggggtttgaccaattgtaagaaatcctttttgtgga |
131 |
Q |
| |
|
||||||||||||||||| || ||||||||||||||||| || || ||| | | || ||||||||||||||| ||||||| |||||||| |||||||||| |
|
|
| T |
4617579 |
gttgtttatgtgaatttcggcagcattacagttatgacacccgagcaattactggaatttgcttggggtttggccaattgcaagaaatcatttttgtgga |
4617480 |
T |
|
| Q |
132 |
tcattaggcctgaccttgtcattggcggctcgtttattttgtcatctgagtttgagaatgaaatttcagatagaggcctaattgtgggttggtgctcgca |
231 |
Q |
| |
|
|||| |||||||| ||||||||||| ||||| | ||||| |||||||||||| ||||||||| |||||||||||||||| | ||||||| | || |
|
|
| T |
4617479 |
tcataaggcctgatcttgtcattggtggctcagtgattttctcatctgagtttacaaatgaaattgcagatagaggcctaatagcaagttggtgtccaca |
4617380 |
T |
|
| Q |
232 |
agagaaagtattgaaccatcctt |
254 |
Q |
| |
|
||| ||||| |||||||| |||| |
|
|
| T |
4617379 |
agacaaagtgttgaaccaccctt |
4617357 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 32 - 210
Target Start/End: Complemental strand, 4506414 - 4506236
Alignment:
| Q |
32 |
gttgtttatgtgaattttggaagcattacagttatgactccagatcaactgttagagtttgcttggggtttgaccaattgtaagaaatcctttttgtgga |
131 |
Q |
| |
|
|||||||||||||||||||||||||| ||| ||||| |||| || || | ||||||||||||||||||||| ||||| | |||||| |||||||||||| |
|
|
| T |
4506414 |
gttgtttatgtgaattttggaagcatcacaattatgtctccggagaaatttttagagtttgcttggggtttggccaatagcaagaaaccctttttgtgga |
4506315 |
T |
|
| Q |
132 |
tcattaggcctgaccttgtcattggcggctcgtttattttgtcatctgagtttgagaatgaaatttcagatagaggcct |
210 |
Q |
| |
|
||||||||||||| ||||| ||||| ||||| | ||||||| || ||||||| |||||||||||||||||| |||| |
|
|
| T |
4506314 |
tcattaggcctgatcttgtaattggtggctcagtggttttgtcttcagagtttgcaaatgaaatttcagatagaagcct |
4506236 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #21
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 32 - 254
Target Start/End: Complemental strand, 4470360 - 4470138
Alignment:
| Q |
32 |
gttgtttatgtgaattttggaagcattacagttatgactccagatcaactgttagagtttgcttggggtttgaccaattgtaagaaatcctttttgtgga |
131 |
Q |
| |
|
||||| ||||| ||||| || ||| | ||||||||| ||||||| |||||||||||||||||||||||||| | ||| | ||| || |||||||||||| |
|
|
| T |
4470360 |
gttgtctatgtaaatttcggcagcgtcacagttatgtctccagagaaactgttagagtttgcttggggtttggcaaatagcaagcaaccctttttgtgga |
4470261 |
T |
|
| Q |
132 |
tcattaggcctgaccttgtcattggcggctcgtttattttgtcatctgagtttgagaatgaaatttcagatagaggcctaattgtgggttggtgctcgca |
231 |
Q |
| |
|
|||||||||| || |||||||||||||||||| | |||| ||||| ||| ||| |||| ||||||||||||||||||||| ||| ||||| | || |
|
|
| T |
4470260 |
tcattaggcccgatcttgtcattggcggctcggtagttttctcatcagagattgtaaatggaatttcagatagaggcctaatcgtgaactggtgtcctca |
4470161 |
T |
|
| Q |
232 |
agagaaagtattgaaccatcctt |
254 |
Q |
| |
|
|||| ||||| ||||||| |||| |
|
|
| T |
4470160 |
agagcaagtactgaaccaccctt |
4470138 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #22
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 32 - 249
Target Start/End: Complemental strand, 4574865 - 4574648
Alignment:
| Q |
32 |
gttgtttatgtgaattttggaagcattacagttatgactccagatcaactgttagagtttgcttggggtttgaccaattgtaagaaatcctttttgtgga |
131 |
Q |
| |
|
||||||||||| |||||||| ||||| || |||||| ||| ||| | || |||||||||||||||||||| |||| | || ||| |||||||||||| |
|
|
| T |
4574865 |
gttgtttatgtaaattttggcagcatcactgttatgtctcgagagaagctcgtagagtttgcttggggtttggccaacagcaaaaaaccctttttgtgga |
4574766 |
T |
|
| Q |
132 |
tcattaggcctgaccttgtcattggcggctcgtttattttgtcatctgagtttgagaatgaaatttcagatagaggcctaattgtgggttggtgctcgca |
231 |
Q |
| |
|
||||||||||||| ||||||||||| |||||| | |||| |||||||| ||| ||| ||||||||||||||||| ||||| | ||||||| | || |
|
|
| T |
4574765 |
tcattaggcctgatcttgtcattggtggctcggtggttttctcatctgattttttgaaagaaatttcagatagaggactaatagcaagttggtgtccaca |
4574666 |
T |
|
| Q |
232 |
agagaaagtattgaacca |
249 |
Q |
| |
|
|||||||||||||||||| |
|
|
| T |
4574665 |
agagaaagtattgaacca |
4574648 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #23
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 32 - 207
Target Start/End: Original strand, 4503972 - 4504147
Alignment:
| Q |
32 |
gttgtttatgtgaattttggaagcattacagttatgactccagatcaactgttagagtttgcttggggtttgaccaattgtaagaaatcctttttgtgga |
131 |
Q |
| |
|
||||||||||| |||||||| ||||||||||||||| || |||| || ||||||||||||||||||||||| ||||| | |||||| | |||||||||| |
|
|
| T |
4503972 |
gttgtttatgtaaattttggcagcattacagttatgtcttaagataaattgttagagtttgcttggggtttggccaatagcaagaaaccttttttgtgga |
4504071 |
T |
|
| Q |
132 |
tcattaggcctgaccttgtcattggcggctcgtttattttgtcatctgagtttgagaatgaaatttcagatagagg |
207 |
Q |
| |
|
| ||||||||||| ||||| ||||| ||||| | ||||||||||| |||| |||||||| ||| ||||||| |
|
|
| T |
4504072 |
ttattaggcctgatcttgttattggtggctcagaggtgttgtcatctgattttgtgaatgaaacttctaatagagg |
4504147 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #24
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 32 - 254
Target Start/End: Original strand, 4266741 - 4266963
Alignment:
| Q |
32 |
gttgtttatgtgaattttggaagcattacagttatgactccagatcaactgttagagtttgcttggggtttgaccaattgtaagaaatcctttttgtgga |
131 |
Q |
| |
|
||||||||||| |||||||| ||||| ||||||||| | | ||| | || ||||||||||||||||||||| |||| | ||||| | |||||||||| |
|
|
| T |
4266741 |
gttgtttatgtaaattttggtagcatcacagttatgtcacgagagaagctcttagagtttgcttggggtttggccaacagcaagaacccttttttgtgga |
4266840 |
T |
|
| Q |
132 |
tcattaggcctgaccttgtcattggcggctcgtttattttgtcatctgagtttgagaatgaaatttcagatagaggcctaattgtgggttggtgctcgca |
231 |
Q |
| |
|
| ||||||||||| ||||||||||| ||||| || ||||||||||||| ||| || ||||||||||||||||| ||||| | ||||||| | || |
|
|
| T |
4266841 |
taattaggcctgatcttgtcattgggggctcagttgttttgtcatctgatttttttaaagaaatttcagatagaggactaatagcaagttggtgtccaca |
4266940 |
T |
|
| Q |
232 |
agagaaagtattgaaccatcctt |
254 |
Q |
| |
|
||| ||||| |||||||| |||| |
|
|
| T |
4266941 |
agataaagtgttgaaccaccctt |
4266963 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #25
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 35 - 254
Target Start/End: Complemental strand, 4568607 - 4568391
Alignment:
| Q |
35 |
gtttatgtgaattttggaagcattacagttatgactccagatcaactgttagagtttgcttggggtttgaccaattgtaagaaatcctttttgtggatca |
134 |
Q |
| |
|
|||||||||||||||||||||| || |||||||||||||| || ||||||||| |||| ||||| |||| | |||||| | ||||||||||||| |
|
|
| T |
4568607 |
gtttatgtgaattttggaagcactatggttatgactccagagca---gttagagttctcttgaggttttgccaacagcaagaaaccttttttgtggatca |
4568511 |
T |
|
| Q |
135 |
ttaggcctgaccttgtcattggcggctcgtttattttgtcatctgagtttgagaatgaaatttcagatagaggcctaattgtgggttggtgctcgcaaga |
234 |
Q |
| |
|
|||||||| | ||||||||||| ||||| ||||||||||||| ||||||| ||||| || ||| |||||||||| ||| | | ||||| ||||||| |
|
|
| T |
4568510 |
ttaggccttagcttgtcattggtggctcagttattttgtcatccgagtttgtgaatggaacttcggatagaggccaaatagcaagctggtgtccgcaaga |
4568411 |
T |
|
| Q |
235 |
gaaagtattgaaccatcctt |
254 |
Q |
| |
|
| |||| |||||||| |||| |
|
|
| T |
4568410 |
gcaagtgttgaaccaccctt |
4568391 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #26
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 27 - 254
Target Start/End: Complemental strand, 4458157 - 4457929
Alignment:
| Q |
27 |
agtcggttgtttatgtgaattttggaagcattacagttatgactccagatcaactgttagagtttgcttggggtttgaccaattgtaagaaatccttttt |
126 |
Q |
| |
|
|||| ||| ||||||| |||||||||||||| ||||||||| ||| ||| | || ||||| |||||||||| |||| |||| | |||||| ||||||| |
|
|
| T |
4458157 |
agtctgttatttatgtaaattttggaagcatcacagttatgtctcaagagaagctcttagaatttgcttgggttttggccaacagcaagaaaaccttttt |
4458058 |
T |
|
| Q |
127 |
-gtggatcattaggcctgaccttgtcattggcggctcgtttattttgtcatctgagtttgagaatgaaatttcagatagaggcctaattgtgggttggtg |
225 |
Q |
| |
|
|||||| | ||||||||| ||||||||||| |||||| || |||||||||| || |||| |||||||| ||| ||||||||| |||| | ||||||| |
|
|
| T |
4458057 |
tgtggataactaggcctgatcttgtcattggtggctcggttgttttgtcatcggattttgtgaatgaaacttctgatagaggcttaatagcaagttggtg |
4457958 |
T |
|
| Q |
226 |
ctcgcaagagaaagtattgaaccatcctt |
254 |
Q |
| |
|
| ||||| ||||| |||||||| |||| |
|
|
| T |
4457957 |
tccacaagataaagtgttgaaccaccctt |
4457929 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #27
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 32 - 254
Target Start/End: Complemental strand, 4481250 - 4481028
Alignment:
| Q |
32 |
gttgtttatgtgaattttggaagcattacagttatgactccagatcaactgttagagtttgcttggggtttgaccaattgtaagaaatcctttttgtgga |
131 |
Q |
| |
|
||||||||||| |||||||| ||||| ||| ||||| ||| ||| |||| |||||||||||||||||||| ||||| | || ||| ||||||||||| |
|
|
| T |
4481250 |
gttgtttatgtaaattttggcagcatcacaattatgtctcaagagaaactcttagagtttgcttggggttttgccaatagcaaaaaaaactttttgtgga |
4481151 |
T |
|
| Q |
132 |
tcattaggcctgaccttgtcattggcggctcgtttattttgtcatctgagtttgagaatgaaatttcagatagaggcctaattgtgggttggtgctcgca |
231 |
Q |
| |
|
| |||||| || | ||||||||||| ||||| | | ||||||||||||| | ||| ||||||||| ||||||||||||| | ||||||| | || |
|
|
| T |
4481150 |
ttattaggtctaatcttgtcattggtggctcagtggtgttgtcatctgagtatttgaaagaaatttcaaatagaggcctaatagcaagttggtgtccaca |
4481051 |
T |
|
| Q |
232 |
agagaaagtattgaaccatcctt |
254 |
Q |
| |
|
||||||||| |||||||| |||| |
|
|
| T |
4481050 |
agagaaagttttgaaccaccctt |
4481028 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #28
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 32 - 246
Target Start/End: Original strand, 4489930 - 4490144
Alignment:
| Q |
32 |
gttgtttatgtgaattttggaagcattacagttatgactccagatcaactgttagagtttgcttggggtttgaccaattgtaagaaatcctttttgtgga |
131 |
Q |
| |
|
||||||||||| |||||||| ||||| || |||||| ||| ||| | || ||||||||||| ||||||||| |||| | |||||| |||||||||||| |
|
|
| T |
4489930 |
gttgtttatgtaaattttggcagcatcactgttatgtctcgagagaagctattagagtttgcatggggtttggccaacagcaagaaaccctttttgtgga |
4490029 |
T |
|
| Q |
132 |
tcattaggcctgaccttgtcattggcggctcgtttattttgtcatctgagtttgagaatgaaatttcagatagaggcctaattgtgggttggtgctcgca |
231 |
Q |
| |
|
||||||||||||| ||||| ||||| ||||| | ||||||||||| ||| ||| ||||||||||||||||| ||||| | ||||||| | || |
|
|
| T |
4490030 |
tcattaggcctgatcttgttattggtggctcacaggtgttgtcatctgattttttgaaagaaatttcagatagaggactaatagcaagttggtgtccaca |
4490129 |
T |
|
| Q |
232 |
agagaaagtattgaa |
246 |
Q |
| |
|
|||||| |||||||| |
|
|
| T |
4490130 |
agagaaggtattgaa |
4490144 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #29
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 83 - 249
Target Start/End: Complemental strand, 4561011 - 4560846
Alignment:
| Q |
83 |
ttagagtttgcttggggtttgaccaattgtaagaaatcctttttgtggatcattaggcctgaccttgtcattggcggctcgtttattttgtcatctgagt |
182 |
Q |
| |
|
||||||||||||||||||||| |||| | |||||| | ||||| ||||||||||||||||| ||||||||||| |||||| | |||| |||||||| | |
|
|
| T |
4561011 |
ttagagtttgcttggggtttggccaacagcaagaaaccatttttatggatcattaggcctgatcttgtcattggtggctcggtggttttctcatctga-t |
4560913 |
T |
|
| Q |
183 |
ttgagaatgaaatttcagatagaggcctaattgtgggttggtgctcgcaagagaaagtattgaacca |
249 |
Q |
| |
|
|| ||| ||||||||||||||||| ||||| | ||||||| | |||||||||||||||||||| |
|
|
| T |
4560912 |
ttttgaaagaaatttcagatagaggactaatagcaagttggtgtccacaagagaaagtattgaacca |
4560846 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #30
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 128 - 207
Target Start/End: Original strand, 4391794 - 4391873
Alignment:
| Q |
128 |
tggatcattaggcctgaccttgtcattggcggctcgtttattttgtcatctgagtttgagaatgaaatttcagatagagg |
207 |
Q |
| |
|
||||||||||||| |||||||||||||||| | || | | |||||| || ||||| |||||||||||||||||||||||| |
|
|
| T |
4391794 |
tggatcattaggcttgaccttgtcattggcaggtcatgtgttttgttatatgagtatgagaatgaaatttcagatagagg |
4391873 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 126; Significance: 4e-65; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 25 - 246
Target Start/End: Complemental strand, 3086984 - 3086763
Alignment:
| Q |
25 |
tgagtcggttgtttatgtgaattttggaagcattacagttatgactccagatcaactgttagagtttgcttggggtttgaccaattgtaagaaatccttt |
124 |
Q |
| |
|
|||||| ||||||||||||| |||||| ||||||||||||||||||| ||| ||||| ||||||||||||||||||||| ||||| | |||||| | ||| |
|
|
| T |
3086984 |
tgagtctgttgtttatgtgagttttggcagcattacagttatgactcaagagcaactattagagtttgcttggggtttggccaatagcaagaaaccattt |
3086885 |
T |
|
| Q |
125 |
ttgtggatcattaggcctgaccttgtcattggcggctcgtttattttgtcatctgagtttgagaatgaaatttcagatagaggcctaattgtgggttggt |
224 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||||| |||||| ||||||||||||||||||| ||||||||||||||||| ||||| | | |||| |
|
|
| T |
3086884 |
ttgtggatcattaggcctgatcttgtcattggcggctcctttattatgtcatctgagtttgagaaagaaatttcagatagaggtctaatcgcaagctggt |
3086785 |
T |
|
| Q |
225 |
gctcgcaagagaaagtattgaa |
246 |
Q |
| |
|
| |||||||| |||||||||| |
|
|
| T |
3086784 |
gtccgcaagagcaagtattgaa |
3086763 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 103; Significance: 2e-51; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 32 - 254
Target Start/End: Complemental strand, 1281671 - 1281449
Alignment:
| Q |
32 |
gttgtttatgtgaattttggaagcattacagttatgactccagatcaactgttagagtttgcttggggtttgaccaattgtaagaaatcctttttgtgga |
131 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||||||| ||||| || |||||||||||| || | ||| | |||||| | |||||||||| |
|
|
| T |
1281671 |
gttgtttatgtgaatttcggaagcattacagttatgactccagagcaacttcaggaatttgcttggggtctggctaatagcaagaaaccatttttgtgga |
1281572 |
T |
|
| Q |
132 |
tcattaggcctgaccttgtcattggcggctcgtttattttgtcatctgagtttgagaatgaaatttcagatagaggcctaattgtgggttggtgctcgca |
231 |
Q |
| |
|
||| ||||||||| ||||||||||||||||| | |||||||||||||| |||| ||||||||||||||||||||||||||| | ||||||| | || |
|
|
| T |
1281571 |
tcactaggcctgatcttgtcattggcggctcagtgattttgtcatctgactttgcgaatgaaatttcagatagaggcctaatagcaagttggtgtccaca |
1281472 |
T |
|
| Q |
232 |
agagaaagtattgaaccatcctt |
254 |
Q |
| |
|
||||||||| |||||||| |||| |
|
|
| T |
1281471 |
agagaaagtgttgaaccaccctt |
1281449 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 101; Significance: 4e-50; HSPs: 3)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 29 - 213
Target Start/End: Complemental strand, 1674786 - 1674602
Alignment:
| Q |
29 |
tcggttgtttatgtgaattttggaagcattacagttatgactccagatcaactgttagagtttgcttggggtttgaccaattgtaagaaatcctttttgt |
128 |
Q |
| |
|
|||||||||||||||||||| || ||||||| |||||||||||||||||||| || |||||||||||||||||| || |||| |||||| | ||||||| |
|
|
| T |
1674786 |
tcggttgtttatgtgaatttcggtagcattattgttatgactccagatcaactattggagtttgcttggggtttggccgattgcaagaaaccttttttgt |
1674687 |
T |
|
| Q |
129 |
ggatcattaggcctgaccttgtcattggcggctcgtttattttgtcatctgagtttgagaatgaaatttcagatagaggcctaat |
213 |
Q |
| |
|
|||||| ||||||||| ||||||||||| ||||| | ||||||||||||||||| ||| ||||||||||||||||||||||| |
|
|
| T |
1674686 |
ggatcactaggcctgatcttgtcattggtggctcagtggttttgtcatctgagtttatgaaagaaatttcagatagaggcctaat |
1674602 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 32 - 254
Target Start/End: Original strand, 16685842 - 16686064
Alignment:
| Q |
32 |
gttgtttatgtgaattttggaagcattacagttatgactccagatcaactgttagagtttgcttggggtttgaccaattgtaagaaatcctttttgtgga |
131 |
Q |
| |
|
|||||||||||||||||||| ||||| |||||||||||| |||| |||| ||||||||||||||||||||||||||| | ||| || ||| |||| |
|
|
| T |
16685842 |
gttgtttatgtgaattttgggagcatgacagttatgactgcagaaaaactattagagtttgcttggggtttgaccaatagcaagcaacattttcaatgga |
16685941 |
T |
|
| Q |
132 |
tcattaggcctgaccttgtcattggcggctcgtttattttgtcatctgagtttgagaatgaaatttcagatagaggcctaattgtgggttggtgctcgca |
231 |
Q |
| |
|
|||||||| |||| ||||||||| |||| || | ||||||||||||||||| |||||||||| ||||||||| ||||||| | | | |||||| |||| |
|
|
| T |
16685942 |
tcattaggtctgatcttgtcatttgcggttccgtggttttgtcatctgagtttaagaatgaaatctcagatagaagcctaatcgcgagctggtgcccgca |
16686041 |
T |
|
| Q |
232 |
agagaaagtattgaaccatcctt |
254 |
Q |
| |
|
|||| ||||||| |||||||||| |
|
|
| T |
16686042 |
agagcaagtattaaaccatcctt |
16686064 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 81 - 254
Target Start/End: Original strand, 20863467 - 20863640
Alignment:
| Q |
81 |
tgttagagtttgcttggggtttgaccaattgtaagaaatcctttttgtggatcattaggcctgaccttgtcattggcggctcgtttattttgtcatctga |
180 |
Q |
| |
|
||||||||||||| ||||||||| |||| | |||||| ||||||||||||||||||||||||| ||||||||||| |||||| | ||||| ||||||| |
|
|
| T |
20863467 |
tgttagagtttgcatggggtttggccaacagcaagaaaccctttttgtggatcattaggcctgatcttgtcattggtggctcggtgattttttcatctgc |
20863566 |
T |
|
| Q |
181 |
gtttgagaatgaaatttcagatagaggcctaattgtgggttggtgctcgcaagagaaagtattgaaccatcctt |
254 |
Q |
| |
|
||||| ||||||||||||||||||||||||||| | | ||||||| | |||||||| || ||||||||||||| |
|
|
| T |
20863567 |
gtttgtgaatgaaatttcagatagaggcctaatcgcgagttggtgtccacaagagaaggtgttgaaccatcctt |
20863640 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 66; Significance: 3e-29; HSPs: 3)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 32 - 213
Target Start/End: Complemental strand, 24103556 - 24103375
Alignment:
| Q |
32 |
gttgtttatgtgaattttggaagcattacagttatgactccagatcaactgttagagtttgcttggggtttgaccaattgtaagaaatcctttttgtgga |
131 |
Q |
| |
|
||||||||||| |||||||| ||||| ||||||||| | | ||| | || ||||||||||||||||||||| ||||| | ||||| | |||||||||| |
|
|
| T |
24103556 |
gttgtttatgtaaattttggtagcatcacagttatgtcacgagagaagctcttagagtttgcttggggtttggccaatagcaagaacccttttttgtgga |
24103457 |
T |
|
| Q |
132 |
tcattaggcctgaccttgtcattggcggctcgtttattttgtcatctgagtttgagaatgaaatttcagatagaggcctaat |
213 |
Q |
| |
|
| ||||||||||| ||||||||||| ||||| || ||||||||||||| ||| || ||| ||||||||||||| ||||| |
|
|
| T |
24103456 |
taattaggcctgatcttgtcattgggggctcagttgttttgtcatctgatttttttaaagaagtttcagatagaggactaat |
24103375 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 105 - 213
Target Start/End: Original strand, 27999747 - 27999855
Alignment:
| Q |
105 |
ccaattgtaagaaatcctttttgtggatcattaggcctgaccttgtcattggcggctcgtttattttgtcatctgagtttgagaatgaaatttcagatag |
204 |
Q |
| |
|
||||||| |||||| | ||||||||||||| ||||||| | ||||||||||| ||||| | ||||||||||||||||| ||| |||||||||||||| |
|
|
| T |
27999747 |
ccaattgcaagaaaccttttttgtggatcactaggcctaatcttgtcattggtggctcagtggttttgtcatctgagtttaggaaagaaatttcagatag |
27999846 |
T |
|
| Q |
205 |
aggcctaat |
213 |
Q |
| |
|
||||||||| |
|
|
| T |
27999847 |
aggcctaat |
27999855 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 54
Target Start/End: Complemental strand, 24107001 - 24106965
Alignment:
| Q |
18 |
aggaacctgagtcggttgtttatgtgaattttggaag |
54 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||| |
|
|
| T |
24107001 |
aggaacctgagtttgttgtttatgtgaattttggaag |
24106965 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0475 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0475
Description:
Target: scaffold0475; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 113 - 209
Target Start/End: Original strand, 3165 - 3261
Alignment:
| Q |
113 |
aagaaatcctttttgtggatcattaggcctgaccttgtcattggcggctcgtttattttgtcatctgagtttgagaatgaaatttcagatagaggcc |
209 |
Q |
| |
|
|||||| ||||| |||||||||||||| ||||||||||||||||||| || | | ||||| || ||||||||||||||||| |||||||||||||| |
|
|
| T |
3165 |
aagaaaccctttgtgtggatcattaggtctgaccttgtcattggcggatcatgtgctttgttatatgagtttgagaatgaaacttcagatagaggcc |
3261 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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