View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12660_low_38 (Length: 271)

Name: NF12660_low_38
Description: NF12660
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12660_low_38
NF12660_low_38
[»] scaffold1434 (1 HSPs)
scaffold1434 (4-259)||(840-1095)
[»] scaffold0125 (2 HSPs)
scaffold0125 (4-259)||(17591-17846)
scaffold0125 (172-245)||(6895-6968)
[»] chr2 (56 HSPs)
chr2 (4-259)||(30211855-30212110)
chr2 (4-170)||(45528849-45529015)
chr2 (20-182)||(24674816-24674978)
chr2 (16-182)||(24709360-24709526)
chr2 (16-182)||(44379849-44380015)
chr2 (16-182)||(44386519-44386685)
chr2 (16-187)||(23086771-23086943)
chr2 (16-215)||(24833523-24833722)
chr2 (16-182)||(9609463-9609629)
chr2 (16-182)||(10868177-10868343)
chr2 (16-182)||(16924587-16924753)
chr2 (16-182)||(16981479-16981645)
chr2 (16-182)||(16998327-16998493)
chr2 (16-182)||(17063044-17063210)
chr2 (16-182)||(24261697-24261863)
chr2 (16-182)||(27370596-27370762)
chr2 (16-182)||(41609294-41609460)
chr2 (16-182)||(45676799-45676965)
chr2 (16-183)||(23138364-23138530)
chr2 (16-182)||(27217342-27217509)
chr2 (16-215)||(24878945-24879144)
chr2 (16-182)||(23188335-23188501)
chr2 (16-182)||(23599598-23599764)
chr2 (138-254)||(36734058-36734174)
chr2 (16-183)||(23550154-23550320)
chr2 (16-114)||(11358824-11358922)
chr2 (16-206)||(20832286-20832475)
chr2 (16-206)||(31829959-31830148)
chr2 (16-114)||(1063143-1063241)
chr2 (16-182)||(21145981-21146147)
chr2 (16-182)||(23061626-23061792)
chr2 (173-254)||(20005635-20005716)
chr2 (173-254)||(28344643-28344724)
chr2 (110-235)||(30800257-30800381)
chr2 (16-184)||(23265541-23265708)
chr2 (133-203)||(19647543-19647613)
chr2 (56-182)||(27385700-27385826)
chr2 (173-254)||(45536232-45536313)
chr2 (16-108)||(22757413-22757505)
chr2 (16-151)||(24653703-24653838)
chr2 (28-182)||(21326228-21326382)
chr2 (65-182)||(22325841-22325958)
chr2 (173-254)||(23801718-23801799)
chr2 (16-184)||(27366029-27366196)
chr2 (16-178)||(23293290-23293451)
chr2 (128-187)||(28350545-28350604)
chr2 (16-101)||(23276184-23276269)
chr2 (173-215)||(10743608-10743650)
chr2 (140-182)||(12830368-12830410)
chr2 (138-204)||(19802721-19802785)
chr2 (173-215)||(23968109-23968151)
chr2 (17-107)||(24944769-24944859)
chr2 (173-215)||(25142732-25142774)
chr2 (173-214)||(23613666-23613707)
chr2 (173-214)||(25085884-25085925)
chr2 (172-235)||(30800665-30800729)
[»] chr7 (62 HSPs)
chr7 (4-244)||(21661587-21661827)
chr7 (18-215)||(15203531-15203728)
chr7 (16-182)||(14332082-14332248)
chr7 (16-182)||(23517188-23517354)
chr7 (19-182)||(8707290-8707453)
chr7 (16-183)||(12254457-12254624)
chr7 (16-215)||(14347489-14347688)
chr7 (16-182)||(10870680-10870846)
chr7 (16-182)||(11237632-11237798)
chr7 (16-182)||(15161476-15161642)
chr7 (16-182)||(18552177-18552343)
chr7 (16-182)||(17735-17902)
chr7 (16-182)||(8198313-8198479)
chr7 (16-182)||(11553521-11553687)
chr7 (16-182)||(12687186-12687352)
chr7 (16-182)||(13685748-13685914)
chr7 (16-184)||(11388824-11388991)
chr7 (16-215)||(14037459-14037658)
chr7 (16-182)||(15163840-15164005)
chr7 (20-182)||(18177427-18177589)
chr7 (16-182)||(44791770-44791936)
chr7 (16-206)||(11306663-11306852)
chr7 (16-178)||(13634140-13634302)
chr7 (173-254)||(33060747-33060828)
chr7 (16-184)||(13665252-13665419)
chr7 (16-114)||(8212528-8212626)
chr7 (16-206)||(26118981-26119170)
chr7 (173-254)||(38300106-38300187)
chr7 (173-254)||(42565116-42565197)
chr7 (16-114)||(49152052-49152150)
chr7 (17-117)||(12207198-12207298)
chr7 (16-111)||(12455460-12455555)
chr7 (16-117)||(6413262-6413363)
chr7 (174-246)||(33555730-33555802)
chr7 (17-114)||(19146965-19147062)
chr7 (17-114)||(20746364-20746461)
chr7 (16-184)||(16072695-16072862)
chr7 (16-111)||(1804-1899)
chr7 (16-117)||(16950868-16950969)
chr7 (16-117)||(26288433-26288534)
chr7 (17-113)||(14264642-14264738)
chr7 (20-114)||(14129627-14129721)
chr7 (20-114)||(14433445-14433539)
chr7 (20-114)||(15340250-15340344)
chr7 (170-215)||(17000169-17000214)
chr7 (173-215)||(3288306-3288348)
chr7 (174-224)||(13314727-13314777)
chr7 (173-215)||(14179830-14179872)
chr7 (173-215)||(15118629-15118671)
chr7 (173-215)||(20251699-20251741)
chr7 (136-204)||(1493576-1493642)
chr7 (171-224)||(9256001-9256054)
chr7 (171-224)||(9314196-9314249)
chr7 (138-215)||(11085871-11085947)
chr7 (38-111)||(13021113-13021186)
chr7 (20-101)||(14286777-14286858)
chr7 (136-204)||(16928891-16928957)
chr7 (170-215)||(18073755-18073800)
chr7 (138-215)||(23556715-23556792)
chr7 (173-214)||(46385461-46385502)
chr7 (136-188)||(15114228-15114280)
chr7 (173-246)||(36300268-36300337)
[»] chr5 (61 HSPs)
chr5 (19-254)||(21404392-21404627)
chr5 (16-206)||(20468686-20468876)
chr5 (23-215)||(26739304-26739497)
chr5 (16-215)||(21343950-21344149)
chr5 (16-182)||(22333479-22333645)
chr5 (16-182)||(27669082-27669248)
chr5 (16-182)||(41770470-41770636)
chr5 (16-204)||(21662631-21662818)
chr5 (16-215)||(22344701-22344900)
chr5 (16-182)||(15000331-15000497)
chr5 (16-182)||(16356130-16356296)
chr5 (16-182)||(22134296-22134462)
chr5 (16-182)||(27518035-27518201)
chr5 (16-182)||(27609982-27610148)
chr5 (16-182)||(29476665-29476831)
chr5 (16-182)||(34566122-34566288)
chr5 (16-182)||(40708408-40708574)
chr5 (16-182)||(19769588-19769754)
chr5 (16-182)||(27685992-27686157)
chr5 (16-117)||(21564544-21564645)
chr5 (16-184)||(21984897-21985065)
chr5 (15-175)||(23470864-23471024)
chr5 (16-182)||(23573370-23573536)
chr5 (16-182)||(37292088-37292254)
chr5 (16-184)||(24736203-24736370)
chr5 (16-184)||(24737377-24737544)
chr5 (16-184)||(24750146-24750313)
chr5 (16-178)||(26681872-26682034)
chr5 (16-178)||(26953479-26953641)
chr5 (16-184)||(21625145-21625312)
chr5 (16-114)||(22502357-22502455)
chr5 (26-114)||(14887596-14887684)
chr5 (22-182)||(18775405-18775565)
chr5 (16-215)||(20573117-20573315)
chr5 (16-111)||(23080681-23080776)
chr5 (17-184)||(23442886-23443052)
chr5 (176-254)||(19227362-19227440)
chr5 (16-114)||(20341957-20342055)
chr5 (16-114)||(37546092-37546190)
chr5 (16-184)||(6403140-6403307)
chr5 (26-206)||(24799002-24799181)
chr5 (26-114)||(25847750-25847838)
chr5 (17-184)||(21496242-21496408)
chr5 (16-111)||(22380880-22380975)
chr5 (26-184)||(28895544-28895701)
chr5 (26-184)||(28924370-28924527)
chr5 (138-215)||(16221360-16221437)
chr5 (142-215)||(16222849-16222921)
chr5 (138-211)||(19923665-19923738)
chr5 (138-215)||(19926388-19926465)
chr5 (16-117)||(22236512-22236613)
chr5 (20-100)||(17269929-17270009)
chr5 (171-215)||(18745411-18745455)
chr5 (138-214)||(21556566-21556641)
chr5 (66-182)||(25422828-25422944)
chr5 (172-215)||(16224555-16224598)
chr5 (172-215)||(20197192-20197235)
chr5 (173-224)||(22112213-22112264)
chr5 (138-215)||(16641563-16641640)
chr5 (136-204)||(23669570-23669636)
chr5 (175-215)||(14025331-14025371)
[»] scaffold0730 (1 HSPs)
scaffold0730 (4-215)||(5991-6202)
[»] scaffold0058 (2 HSPs)
scaffold0058 (4-217)||(59173-59386)
scaffold0058 (20-117)||(18912-19009)
[»] chr3 (75 HSPs)
chr3 (4-202)||(15016189-15016387)
chr3 (179-259)||(6003500-6003580)
chr3 (16-204)||(15208184-15208372)
chr3 (16-204)||(15247140-15247328)
chr3 (16-182)||(320548-320714)
chr3 (16-182)||(6600062-6600228)
chr3 (16-182)||(10004915-10005081)
chr3 (16-182)||(10905525-10905691)
chr3 (16-182)||(12497563-12497729)
chr3 (16-182)||(13252005-13252171)
chr3 (16-182)||(15403159-15403325)
chr3 (16-182)||(16635088-16635254)
chr3 (16-182)||(43162412-43162578)
chr3 (16-182)||(48424762-48424928)
chr3 (16-215)||(16807575-16807774)
chr3 (16-182)||(15348894-15349060)
chr3 (16-182)||(15590041-15590207)
chr3 (16-182)||(15725582-15725748)
chr3 (16-182)||(26793048-26793214)
chr3 (16-215)||(11297172-11297372)
chr3 (16-182)||(14877148-14877314)
chr3 (20-182)||(16370729-16370890)
chr3 (17-182)||(16691475-16691640)
chr3 (16-184)||(31944796-31944963)
chr3 (16-215)||(15338551-15338750)
chr3 (20-178)||(16757238-16757396)
chr3 (20-182)||(20062707-20062869)
chr3 (15-184)||(14974178-14974347)
chr3 (16-184)||(31689261-31689428)
chr3 (16-183)||(9522033-9522200)
chr3 (17-183)||(9514058-9514224)
chr3 (16-182)||(16492830-16492996)
chr3 (20-182)||(53385671-53385833)
chr3 (170-254)||(48631644-48631728)
chr3 (16-111)||(16330297-16330392)
chr3 (16-182)||(17489165-17489331)
chr3 (186-254)||(3526825-3526893)
chr3 (16-111)||(16338698-16338793)
chr3 (43-182)||(16810689-16810828)
chr3 (89-182)||(6609775-6609868)
chr3 (16-93)||(10383380-10383457)
chr3 (16-117)||(15227039-15227140)
chr3 (173-254)||(48043115-48043195)
chr3 (16-184)||(13972758-13972925)
chr3 (16-184)||(14085997-14086164)
chr3 (16-180)||(14571176-14571339)
chr3 (16-111)||(11961672-11961767)
chr3 (173-244)||(25202478-25202549)
chr3 (138-224)||(36526476-36526562)
chr3 (16-184)||(18134984-18135151)
chr3 (136-215)||(13028766-13028845)
chr3 (69-170)||(11852890-11852991)
chr3 (16-117)||(12854496-12854596)
chr3 (173-246)||(12917031-12917104)
chr3 (16-184)||(11304411-11304578)
chr3 (173-243)||(3160355-3160426)
chr3 (16-114)||(13323290-13323388)
chr3 (20-114)||(16381569-16381663)
chr3 (136-215)||(1981639-1981719)
chr3 (171-215)||(11260158-11260202)
chr3 (16-184)||(15953606-15953773)
chr3 (172-215)||(5216192-5216235)
chr3 (136-215)||(15446490-15446569)
chr3 (172-215)||(35064364-35064407)
chr3 (173-215)||(17050271-17050313)
chr3 (172-214)||(17533231-17533273)
chr3 (172-214)||(40808558-40808600)
chr3 (173-215)||(52311922-52311964)
chr3 (138-215)||(13937957-13938034)
chr3 (136-204)||(15008991-15009057)
chr3 (16-85)||(16412931-16413000)
chr3 (138-203)||(17690369-17690434)
chr3 (136-204)||(19444958-19445024)
chr3 (173-234)||(21845262-21845323)
chr3 (170-215)||(54330171-54330216)
[»] scaffold0035 (2 HSPs)
scaffold0035 (16-205)||(38610-38800)
scaffold0035 (20-191)||(43293-43464)
[»] chr8 (67 HSPs)
chr8 (16-215)||(23948618-23948817)
chr8 (16-215)||(20396978-20397177)
chr8 (175-259)||(22707976-22708060)
chr8 (16-182)||(19900306-19900472)
chr8 (16-182)||(21250704-21250870)
chr8 (16-182)||(20018603-20018769)
chr8 (17-215)||(22121028-22121226)
chr8 (16-183)||(21167390-21167557)
chr8 (22-204)||(22433118-22433299)
chr8 (16-182)||(17674876-17675042)
chr8 (16-182)||(22046136-22046302)
chr8 (16-182)||(22179411-22179577)
chr8 (16-204)||(20387852-20388041)
chr8 (16-182)||(19112452-19112618)
chr8 (16-182)||(21922588-21922754)
chr8 (20-182)||(15440943-15441105)
chr8 (20-182)||(15533142-15533304)
chr8 (20-170)||(19485727-19485877)
chr8 (16-182)||(19977729-19977895)
chr8 (16-182)||(21394718-21394884)
chr8 (16-182)||(21789211-21789377)
chr8 (16-182)||(32599906-32600072)
chr8 (16-215)||(16408898-16409098)
chr8 (16-114)||(12304588-12304686)
chr8 (16-206)||(14564878-14565067)
chr8 (16-114)||(16265471-16265569)
chr8 (16-182)||(22031794-22031960)
chr8 (16-114)||(27347053-27347151)
chr8 (16-182)||(30313997-30314163)
chr8 (16-114)||(804529-804627)
chr8 (16-114)||(6603485-6603583)
chr8 (16-114)||(6678938-6679036)
chr8 (16-182)||(22133894-22134060)
chr8 (138-243)||(21678444-21678548)
chr8 (26-114)||(12912834-12912922)
chr8 (17-184)||(20007611-20007777)
chr8 (16-114)||(28982184-28982282)
chr8 (16-114)||(28987404-28987502)
chr8 (128-215)||(3274243-3274330)
chr8 (43-170)||(22165071-22165198)
chr8 (163-246)||(23884492-23884575)
chr8 (20-117)||(22179011-22179108)
chr8 (16-184)||(21325263-21325430)
chr8 (17-184)||(20010754-20010920)
chr8 (173-243)||(21676133-21676202)
chr8 (20-114)||(29304283-29304377)
chr8 (16-117)||(19851238-19851339)
chr8 (16-117)||(19857274-19857375)
chr8 (173-254)||(20516644-20516725)
chr8 (57-180)||(23649846-23649969)
chr8 (16-117)||(31417327-31417428)
chr8 (16-72)||(22987073-22987129)
chr8 (30-101)||(22062249-22062320)
chr8 (89-216)||(22984909-22985036)
chr8 (16-114)||(23654757-23654855)
chr8 (161-215)||(31721937-31721991)
chr8 (142-215)||(20458352-20458425)
chr8 (172-215)||(5081708-5081751)
chr8 (172-215)||(22208724-22208767)
chr8 (171-214)||(22485033-22485076)
chr8 (173-215)||(22257832-22257874)
chr8 (170-224)||(22345509-22345563)
chr8 (170-224)||(22357169-22357223)
chr8 (173-215)||(36731178-36731220)
chr8 (170-215)||(21400307-21400352)
chr8 (170-215)||(21794800-21794845)
chr8 (175-215)||(5762285-5762325)
[»] scaffold0004 (6 HSPs)
scaffold0004 (16-206)||(111724-111914)
scaffold0004 (16-184)||(203881-204048)
scaffold0004 (16-184)||(117296-117463)
scaffold0004 (16-184)||(385545-385712)
scaffold0004 (138-224)||(73435-73521)
scaffold0004 (138-215)||(319346-319422)
[»] scaffold0877 (1 HSPs)
scaffold0877 (16-215)||(673-874)
[»] scaffold0217 (1 HSPs)
scaffold0217 (109-246)||(29020-29157)
[»] scaffold1832 (1 HSPs)
scaffold1832 (16-204)||(1002-1190)
[»] chr6 (64 HSPs)
chr6 (16-215)||(19167350-19167549)
chr6 (173-259)||(3006524-3006610)
chr6 (16-182)||(2875358-2875524)
chr6 (16-182)||(24313723-24313889)
chr6 (16-179)||(16550716-16550879)
chr6 (16-179)||(16627272-16627435)
chr6 (26-204)||(23078007-23078185)
chr6 (16-182)||(29592475-29592641)
chr6 (16-181)||(25610416-25610581)
chr6 (19-183)||(27331991-27332155)
chr6 (19-183)||(27392731-27392895)
chr6 (16-182)||(1543639-1543805)
chr6 (17-184)||(1640353-1640521)
chr6 (16-215)||(28949118-28949317)
chr6 (20-182)||(16963926-16964088)
chr6 (16-182)||(17032122-17032288)
chr6 (16-182)||(27186996-27187162)
chr6 (16-182)||(27262078-27262244)
chr6 (20-182)||(28263756-28263918)
chr6 (20-182)||(28342505-28342667)
chr6 (16-203)||(22433535-22433723)
chr6 (16-182)||(12497586-12497752)
chr6 (56-182)||(19864274-19864400)
chr6 (16-182)||(21833536-21833702)
chr6 (16-182)||(25112112-25112278)
chr6 (16-184)||(8766703-8766870)
chr6 (16-124)||(24364030-24364138)
chr6 (17-184)||(17025861-17026027)
chr6 (16-182)||(16928195-16928361)
chr6 (16-182)||(18408498-18408664)
chr6 (172-253)||(18459588-18459669)
chr6 (16-184)||(21471160-21471327)
chr6 (26-117)||(18794315-18794406)
chr6 (16-170)||(12511149-12511303)
chr6 (138-254)||(1816849-1816965)
chr6 (17-184)||(18787447-18787613)
chr6 (75-182)||(18932372-18932479)
chr6 (16-183)||(22079213-22079380)
chr6 (16-117)||(21564687-21564788)
chr6 (20-117)||(28292931-28293028)
chr6 (173-246)||(31166557-31166630)
chr6 (16-184)||(11288153-11288320)
chr6 (16-111)||(10469404-10469498)
chr6 (17-184)||(25750368-25750534)
chr6 (16-182)||(14131734-14131899)
chr6 (16-182)||(18198088-18198254)
chr6 (16-105)||(5839774-5839863)
chr6 (17-182)||(22763011-22763175)
chr6 (16-177)||(25765844-25766005)
chr6 (89-183)||(20595044-20595138)
chr6 (89-182)||(1537625-1537718)
chr6 (179-244)||(1819321-1819386)
chr6 (138-215)||(21681575-21681652)
chr6 (138-214)||(23018346-23018422)
chr6 (172-215)||(21676784-21676827)
chr6 (16-184)||(19878857-19879024)
chr6 (171-215)||(23658568-23658612)
chr6 (127-215)||(25959071-25959159)
chr6 (172-215)||(19650571-19650614)
chr6 (172-234)||(10446489-10446551)
chr6 (133-195)||(18659814-18659876)
chr6 (173-215)||(20408758-20408800)
chr6 (173-214)||(15890131-15890172)
chr6 (136-188)||(19566252-19566304)
[»] scaffold0411 (1 HSPs)
scaffold0411 (16-215)||(15492-15691)
[»] scaffold0037 (1 HSPs)
scaffold0037 (16-215)||(117318-117517)
[»] scaffold0100 (1 HSPs)
scaffold0100 (16-215)||(26132-26331)
[»] scaffold0005 (4 HSPs)
scaffold0005 (16-215)||(165122-165321)
scaffold0005 (16-182)||(308386-308552)
scaffold0005 (16-102)||(279243-279329)
scaffold0005 (20-114)||(260103-260197)
[»] chr4 (57 HSPs)
chr4 (16-215)||(14651971-14652170)
chr4 (16-182)||(8386108-8386274)
chr4 (16-182)||(14304127-14304293)
chr4 (16-182)||(23955443-23955609)
chr4 (16-182)||(27711032-27711198)
chr4 (16-182)||(8053773-8053939)
chr4 (16-182)||(15364082-15364248)
chr4 (16-182)||(18296901-18297067)
chr4 (16-182)||(19778943-19779109)
chr4 (16-182)||(29039554-29039720)
chr4 (16-182)||(40472736-40472902)
chr4 (180-259)||(14353455-14353535)
chr4 (16-204)||(14851516-14851704)
chr4 (17-205)||(15415390-15415576)
chr4 (16-183)||(14927409-14927576)
chr4 (16-182)||(12476296-12476462)
chr4 (16-182)||(12523372-12523538)
chr4 (16-182)||(14267049-14267215)
chr4 (16-182)||(14680263-14680429)
chr4 (16-182)||(16355595-16355761)
chr4 (16-114)||(3265207-3265305)
chr4 (16-114)||(20890747-20890845)
chr4 (16-114)||(29453950-29454048)
chr4 (17-182)||(7090159-7090324)
chr4 (16-182)||(18227596-18227762)
chr4 (26-111)||(11207654-11207739)
chr4 (16-184)||(15003774-15003941)
chr4 (16-184)||(15319279-15319445)
chr4 (16-115)||(18164545-18164644)
chr4 (16-111)||(33222685-33222780)
chr4 (16-166)||(18607980-18608130)
chr4 (16-114)||(44662276-44662374)
chr4 (16-117)||(15352036-15352137)
chr4 (26-101)||(1649697-1649772)
chr4 (16-183)||(14159188-14159354)
chr4 (173-246)||(9622813-9622886)
chr4 (173-243)||(15782708-15782779)
chr4 (172-225)||(14477941-14477994)
chr4 (16-117)||(15326305-15326406)
chr4 (16-117)||(15359467-15359568)
chr4 (173-243)||(18463317-18463388)
chr4 (128-204)||(13879132-13879207)
chr4 (173-215)||(10706088-10706130)
chr4 (173-215)||(10919858-10919900)
chr4 (173-215)||(11426136-11426178)
chr4 (172-214)||(12623756-12623798)
chr4 (173-215)||(16616001-16616043)
chr4 (173-215)||(19565408-19565450)
chr4 (173-215)||(26920979-26921021)
chr4 (173-215)||(30139750-30139792)
chr4 (173-215)||(46741721-46741763)
chr4 (173-215)||(50161875-50161917)
chr4 (173-215)||(53629674-53629716)
chr4 (173-214)||(40238988-40239029)
chr4 (175-215)||(9639588-9639628)
chr4 (16-124)||(15070167-15070275)
chr4 (171-215)||(26446757-26446801)
[»] scaffold0379 (4 HSPs)
scaffold0379 (16-184)||(13390-13558)
scaffold0379 (138-233)||(8448-8543)
scaffold0379 (138-233)||(15640-15735)
scaffold0379 (172-215)||(11350-11393)
[»] scaffold0234 (1 HSPs)
scaffold0234 (16-184)||(25484-25651)
[»] chr1 (44 HSPs)
chr1 (172-259)||(20707708-20707795)
chr1 (16-182)||(16351081-16351247)
chr1 (16-182)||(20136489-20136655)
chr1 (16-215)||(19761348-19761545)
chr1 (16-215)||(50612898-50613096)
chr1 (16-215)||(50620726-50620924)
chr1 (16-182)||(19106078-19106244)
chr1 (16-182)||(33391511-33391677)
chr1 (20-182)||(41354955-41355117)
chr1 (16-182)||(51333975-51334141)
chr1 (16-179)||(21836664-21836827)
chr1 (16-182)||(21830014-21830180)
chr1 (16-182)||(21162991-21163157)
chr1 (16-183)||(20249560-20249727)
chr1 (16-183)||(21747245-21747412)
chr1 (16-182)||(16079115-16079281)
chr1 (16-114)||(20294191-20294289)
chr1 (16-114)||(31550663-31550761)
chr1 (16-114)||(37676855-37676953)
chr1 (16-184)||(19665358-19665525)
chr1 (23-114)||(20075551-20075642)
chr1 (16-114)||(20395478-20395576)
chr1 (16-117)||(21736529-21736630)
chr1 (175-254)||(34393123-34393202)
chr1 (20-117)||(20243976-20244073)
chr1 (20-101)||(22433602-22433683)
chr1 (16-117)||(20940545-20940646)
chr1 (138-215)||(37191759-37191836)
chr1 (170-215)||(21238721-21238766)
chr1 (170-215)||(24718968-24719013)
chr1 (172-215)||(8275492-8275535)
chr1 (173-243)||(21187720-21187791)
chr1 (173-224)||(45499912-45499963)
chr1 (172-215)||(50546315-50546358)
chr1 (173-215)||(18122498-18122540)
chr1 (173-215)||(20589257-20589299)
chr1 (173-215)||(20593795-20593837)
chr1 (173-215)||(21045430-21045472)
chr1 (173-215)||(24722876-24722918)
chr1 (170-215)||(16057722-16057767)
chr1 (173-214)||(21099243-21099284)
chr1 (171-215)||(25250524-25250567)
chr1 (174-214)||(35895453-35895493)
chr1 (171-215)||(44892929-44892973)
[»] scaffold0007 (2 HSPs)
scaffold0007 (16-113)||(86917-87014)
scaffold0007 (138-235)||(18316-18415)
[»] scaffold0165 (3 HSPs)
scaffold0165 (16-182)||(26334-26500)
scaffold0165 (170-243)||(32258-32331)
scaffold0165 (17-114)||(972-1069)
[»] scaffold0020 (1 HSPs)
scaffold0020 (16-182)||(179944-180110)
[»] scaffold0962 (1 HSPs)
scaffold0962 (16-204)||(103-290)
[»] scaffold0359 (1 HSPs)
scaffold0359 (16-204)||(16692-16880)
[»] scaffold0476 (1 HSPs)
scaffold0476 (16-183)||(9069-9236)
[»] scaffold0431 (1 HSPs)
scaffold0431 (16-215)||(7071-7270)
[»] scaffold0459 (1 HSPs)
scaffold0459 (16-182)||(141-307)
[»] scaffold0220 (2 HSPs)
scaffold0220 (16-182)||(1235-1401)
scaffold0220 (138-215)||(14452-14529)
[»] scaffold0180 (1 HSPs)
scaffold0180 (16-182)||(33165-33331)
[»] scaffold0044 (2 HSPs)
scaffold0044 (16-182)||(14087-14253)
scaffold0044 (16-182)||(347-513)
[»] scaffold0031 (1 HSPs)
scaffold0031 (16-182)||(64444-64610)
[»] scaffold0028 (5 HSPs)
scaffold0028 (16-182)||(42881-43047)
scaffold0028 (16-182)||(62016-62182)
scaffold0028 (16-184)||(2540-2708)
scaffold0028 (16-215)||(8179-8378)
scaffold0028 (16-184)||(50927-51094)
[»] scaffold0048 (1 HSPs)
scaffold0048 (138-254)||(68358-68473)
[»] scaffold0138 (1 HSPs)
scaffold0138 (16-215)||(16878-17076)
[»] scaffold0012 (2 HSPs)
scaffold0012 (16-183)||(228769-228936)
scaffold0012 (17-183)||(219831-219997)
[»] scaffold0737 (1 HSPs)
scaffold0737 (16-182)||(395-561)
[»] scaffold0676 (1 HSPs)
scaffold0676 (16-182)||(5741-5907)
[»] scaffold0454 (1 HSPs)
scaffold0454 (16-182)||(6665-6831)
[»] scaffold0206 (1 HSPs)
scaffold0206 (16-182)||(30638-30804)
[»] scaffold0198 (1 HSPs)
scaffold0198 (16-182)||(27694-27860)
[»] scaffold0109 (2 HSPs)
scaffold0109 (16-182)||(33986-34152)
scaffold0109 (16-182)||(8323-8489)
[»] scaffold0042 (2 HSPs)
scaffold0042 (16-182)||(40202-40368)
scaffold0042 (16-182)||(65134-65299)
[»] scaffold0022 (1 HSPs)
scaffold0022 (26-204)||(127622-127800)
[»] scaffold0761 (1 HSPs)
scaffold0761 (16-153)||(5022-5159)
[»] scaffold0069 (1 HSPs)
scaffold0069 (16-184)||(39303-39470)
[»] scaffold0010 (3 HSPs)
scaffold0010 (16-204)||(1927-2115)
scaffold0010 (16-184)||(42746-42913)
scaffold0010 (16-184)||(47812-47979)
[»] scaffold0894 (1 HSPs)
scaffold0894 (16-183)||(865-1032)
[»] scaffold0396 (1 HSPs)
scaffold0396 (16-183)||(3758-3925)
[»] scaffold0358 (1 HSPs)
scaffold0358 (16-182)||(6000-6166)
[»] scaffold0106 (2 HSPs)
scaffold0106 (16-182)||(13766-13932)
scaffold0106 (16-117)||(31202-31303)
[»] scaffold0084 (1 HSPs)
scaffold0084 (15-181)||(4949-5115)
[»] scaffold0040 (2 HSPs)
scaffold0040 (16-183)||(14603-14770)
scaffold0040 (163-215)||(110218-110270)
[»] scaffold0546 (1 HSPs)
scaffold0546 (16-182)||(4818-4984)
[»] scaffold0001 (4 HSPs)
scaffold0001 (16-178)||(447790-447952)
scaffold0001 (16-183)||(161838-162006)
scaffold0001 (138-206)||(30750-30818)
scaffold0001 (138-206)||(36057-36125)
[»] scaffold0064 (3 HSPs)
scaffold0064 (16-184)||(29182-29351)
scaffold0064 (16-184)||(41173-41342)
scaffold0064 (89-182)||(63385-63478)
[»] scaffold0282 (1 HSPs)
scaffold0282 (16-204)||(16829-17017)
[»] scaffold1102 (1 HSPs)
scaffold1102 (171-254)||(1613-1696)
[»] scaffold0089 (1 HSPs)
scaffold0089 (16-114)||(17126-17224)
[»] scaffold0023 (2 HSPs)
scaffold0023 (16-182)||(37159-37325)
scaffold0023 (20-117)||(19155-19252)
[»] scaffold1355 (1 HSPs)
scaffold1355 (19-180)||(405-566)
[»] scaffold0249 (1 HSPs)
scaffold0249 (16-184)||(5415-5582)
[»] scaffold0052 (1 HSPs)
scaffold0052 (38-182)||(11644-11788)
[»] scaffold0034 (2 HSPs)
scaffold0034 (16-184)||(5331-5498)
scaffold0034 (17-184)||(14320-14486)
[»] scaffold0924 (1 HSPs)
scaffold0924 (17-184)||(3617-3783)
[»] scaffold0556 (1 HSPs)
scaffold0556 (16-183)||(3640-3806)
[»] scaffold0333 (1 HSPs)
scaffold0333 (16-183)||(15219-15386)
[»] scaffold0320 (1 HSPs)
scaffold0320 (16-111)||(2390-2485)
[»] scaffold0120 (1 HSPs)
scaffold0120 (31-182)||(10658-10809)
[»] scaffold0009 (1 HSPs)
scaffold0009 (16-111)||(248411-248506)
[»] scaffold0413 (1 HSPs)
scaffold0413 (16-182)||(732-898)
[»] scaffold0324 (1 HSPs)
scaffold0324 (16-182)||(16684-16850)
[»] scaffold0161 (1 HSPs)
scaffold0161 (16-178)||(1106-1268)
[»] scaffold0060 (1 HSPs)
scaffold0060 (16-114)||(42578-42676)
[»] scaffold0056 (1 HSPs)
scaffold0056 (56-182)||(12764-12890)
[»] scaffold0395 (1 HSPs)
scaffold0395 (16-184)||(6312-6480)
[»] scaffold0114 (4 HSPs)
scaffold0114 (16-117)||(32141-32242)
scaffold0114 (20-117)||(35847-35944)
scaffold0114 (20-101)||(43313-43394)
scaffold0114 (20-115)||(19916-20011)
[»] scaffold1032 (1 HSPs)
scaffold1032 (16-184)||(2278-2445)
[»] scaffold0947 (1 HSPs)
scaffold0947 (16-184)||(2844-3011)
[»] scaffold0298 (1 HSPs)
scaffold0298 (16-184)||(19709-19876)
[»] scaffold0235 (1 HSPs)
scaffold0235 (16-184)||(22089-22256)
[»] scaffold0203 (2 HSPs)
scaffold0203 (16-184)||(14664-14831)
scaffold0203 (16-184)||(9290-9457)
[»] scaffold0126 (1 HSPs)
scaffold0126 (16-184)||(45570-45737)
[»] scaffold0124 (2 HSPs)
scaffold0124 (16-184)||(10614-10781)
scaffold0124 (16-177)||(812-972)
[»] scaffold0113 (2 HSPs)
scaffold0113 (16-184)||(26278-26445)
scaffold0113 (16-115)||(16470-16569)
[»] scaffold0019 (2 HSPs)
scaffold0019 (16-184)||(135845-136012)
scaffold0019 (173-215)||(11644-11686)
[»] scaffold0093 (2 HSPs)
scaffold0093 (16-111)||(26059-26154)
scaffold0093 (45-111)||(36727-36793)
[»] scaffold1939 (1 HSPs)
scaffold1939 (173-254)||(484-566)
[»] scaffold0507 (1 HSPs)
scaffold0507 (16-117)||(6769-6870)
[»] scaffold0403 (1 HSPs)
scaffold0403 (66-182)||(6142-6258)
[»] scaffold0244 (1 HSPs)
scaffold0244 (16-184)||(1149-1316)
[»] scaffold0076 (1 HSPs)
scaffold0076 (16-184)||(34090-34257)
[»] scaffold0074 (2 HSPs)
scaffold0074 (17-93)||(2956-3032)
scaffold0074 (127-183)||(2891-2947)
[»] scaffold0054 (1 HSPs)
scaffold0054 (16-184)||(60653-60820)
[»] scaffold0026 (3 HSPs)
scaffold0026 (17-117)||(36994-37094)
scaffold0026 (138-215)||(22537-22614)
scaffold0026 (16-53)||(26698-26735)
[»] scaffold0222 (1 HSPs)
scaffold0222 (16-115)||(3681-3780)
[»] scaffold0130 (1 HSPs)
scaffold0130 (17-184)||(11153-11319)
[»] scaffold0011 (3 HSPs)
scaffold0011 (89-215)||(36831-36958)
scaffold0011 (72-184)||(148321-148432)
scaffold0011 (16-184)||(196097-196264)
[»] scaffold0585 (1 HSPs)
scaffold0585 (16-117)||(7449-7550)
[»] scaffold0101 (2 HSPs)
scaffold0101 (89-182)||(7689-7782)
scaffold0101 (16-52)||(7629-7665)
[»] scaffold0049 (1 HSPs)
scaffold0049 (19-184)||(52279-52443)
[»] scaffold0309 (1 HSPs)
scaffold0309 (17-181)||(9527-9690)
[»] scaffold0266 (1 HSPs)
scaffold0266 (16-184)||(13812-13979)
[»] scaffold0205 (1 HSPs)
scaffold0205 (198-254)||(5311-5367)
[»] scaffold0483 (1 HSPs)
scaffold0483 (16-187)||(10496-10666)
[»] scaffold0878 (1 HSPs)
scaffold0878 (138-224)||(3202-3288)
[»] scaffold0108 (1 HSPs)
scaffold0108 (16-114)||(46922-47020)
[»] scaffold1550 (1 HSPs)
scaffold1550 (65-182)||(4-121)
[»] scaffold0216 (1 HSPs)
scaffold0216 (102-215)||(7608-7720)
[»] scaffold0207 (1 HSPs)
scaffold0207 (138-215)||(12774-12851)
[»] scaffold0156 (1 HSPs)
scaffold0156 (16-117)||(27018-27119)
[»] scaffold0104 (1 HSPs)
scaffold0104 (16-117)||(320-421)
[»] scaffold0326 (2 HSPs)
scaffold0326 (16-184)||(3768-3935)
scaffold0326 (16-184)||(18950-19117)
[»] scaffold0149 (3 HSPs)
scaffold0149 (16-184)||(13602-13769)
scaffold0149 (172-215)||(32793-32836)
scaffold0149 (105-178)||(34979-35051)
[»] scaffold0029 (3 HSPs)
scaffold0029 (74-182)||(124815-124923)
scaffold0029 (16-111)||(112357-112452)
scaffold0029 (16-77)||(117274-117335)
[»] scaffold0092 (1 HSPs)
scaffold0092 (173-243)||(38129-38200)
[»] scaffold1243 (1 HSPs)
scaffold1243 (28-90)||(268-330)
[»] scaffold0518 (1 HSPs)
scaffold0518 (23-117)||(10616-10710)
[»] scaffold0139 (2 HSPs)
scaffold0139 (173-219)||(39794-39840)
scaffold0139 (20-184)||(27245-27408)
[»] scaffold0036 (1 HSPs)
scaffold0036 (173-215)||(77600-77642)
[»] scaffold0574 (1 HSPs)
scaffold0574 (16-117)||(4552-4653)
[»] scaffold0555 (1 HSPs)
scaffold0555 (138-215)||(8245-8321)
[»] scaffold0337 (1 HSPs)
scaffold0337 (173-243)||(3500-3572)
[»] scaffold0177 (1 HSPs)
scaffold0177 (16-85)||(17748-17817)
[»] scaffold0083 (1 HSPs)
scaffold0083 (127-204)||(10364-10441)
[»] scaffold0385 (1 HSPs)
scaffold0385 (173-224)||(852-904)
[»] scaffold0039 (2 HSPs)
scaffold0039 (171-215)||(9346-9390)
scaffold0039 (20-100)||(96176-96256)
[»] scaffold1160 (1 HSPs)
scaffold1160 (172-215)||(911-954)
[»] scaffold0853 (1 HSPs)
scaffold0853 (172-215)||(283-326)
[»] scaffold0682 (1 HSPs)
scaffold0682 (16-99)||(1-84)
[»] scaffold0450 (1 HSPs)
scaffold0450 (138-213)||(2179-2254)
[»] scaffold0241 (1 HSPs)
scaffold0241 (138-205)||(3799-3865)
[»] scaffold0231 (1 HSPs)
scaffold0231 (172-215)||(16838-16881)
[»] scaffold0213 (1 HSPs)
scaffold0213 (172-215)||(19860-19903)
[»] scaffold0071 (1 HSPs)
scaffold0071 (136-215)||(15623-15702)
[»] scaffold0600 (1 HSPs)
scaffold0600 (20-114)||(1204-1298)
[»] scaffold0550 (1 HSPs)
scaffold0550 (173-215)||(5245-5287)
[»] scaffold0429 (1 HSPs)
scaffold0429 (136-214)||(1607-1685)
[»] scaffold0414 (1 HSPs)
scaffold0414 (173-215)||(10419-10461)
[»] scaffold0407 (2 HSPs)
scaffold0407 (173-215)||(4281-4323)
scaffold0407 (173-215)||(10747-10789)
[»] scaffold0063 (1 HSPs)
scaffold0063 (173-215)||(63094-63136)
[»] scaffold0021 (1 HSPs)
scaffold0021 (141-215)||(168146-168220)
[»] scaffold0577 (1 HSPs)
scaffold0577 (138-215)||(9425-9501)
[»] scaffold0447 (1 HSPs)
scaffold0447 (138-215)||(12825-12902)
[»] scaffold0383 (1 HSPs)
scaffold0383 (138-215)||(10820-10897)
[»] scaffold0323 (1 HSPs)
scaffold0323 (66-151)||(8651-8736)
[»] scaffold0116 (1 HSPs)
scaffold0116 (171-223)||(35108-35161)
[»] scaffold0609 (1 HSPs)
scaffold0609 (136-204)||(991-1058)
[»] scaffold0509 (2 HSPs)
scaffold0509 (171-215)||(2145-2189)
scaffold0509 (171-215)||(8573-8617)
[»] scaffold0328 (1 HSPs)
scaffold0328 (171-211)||(18139-18179)


Alignment Details
Target: scaffold1434 (Bit Score: 216; Significance: 1e-119; HSPs: 1)
Name: scaffold1434
Description:

Target: scaffold1434; HSP #1
Raw Score: 216; E-Value: 1e-119
Query Start/End: Original strand, 4 - 259
Target Start/End: Original strand, 840 - 1095
Alignment:
Q  4 agtggagaagcagagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctg 103  Q
    |||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||    
T  840 agtgaagaagctgagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggctggtgaaagtttgacgtaggagttggagagaaagatgctg 939  T
Q  104 gagtcgtatccagatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccctaatttattatttagttattt 203  Q
    |||| ||||||||| |||||| |||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||    
T  940 gagttgtatccagagttatttgaatgaggtacattttcgaggacgaaaatattctaagtgggggagaattgttacgccctaatttattgtttagttattt 1039  T
Q  204 tatcgagtttagtgtcattttgaataatttatgtgaataattgcgatgtgtgatgt 259  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1040 tatcgagtttagtgtcattttgaataatttatgtgaataattgcgatgtgtgatgt 1095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 196; Significance: 1e-107; HSPs: 2)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 4 - 259
Target Start/End: Original strand, 17591 - 17846
Alignment:
Q  4 agtggagaagcagagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctg 103  Q
    |||| |||||| |||||||||||||||||||||||||||| |||||||||||||||  || |||||||||||||||| ||||||| ||||||||||||||    
T  17591 agtgaagaagctgagaggcaaggagatacctcttgtgaaaatcgtttggggaggagttgctggtgaaagtttgacgtgggagttgaagagcaagatgctg 17690  T
Q  104 gagtcgtatccagatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccctaatttattatttagttattt 203  Q
    ||||||||| |||| |||||| |||||| ||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  17691 gagtcgtattcagagttatttgaatgaggtacattttcaaggacgaaaatattctaagtgggggagaattgtaacaccctaatttattatttagttattt 17790  T
Q  204 tatcgagtttagtgtcattttgaataatttatgtgaataattgcgatgtgtgatgt 259  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  17791 tatcgagtttagtgtcatttggaataatttatgtgaataattgcgatgtgtgatgt 17846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125; HSP #2
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 172 - 245
Target Start/End: Original strand, 6895 - 6968
Alignment:
Q  172 ttgtaacgccctaatttattatttagttattttatcgagtttagtgtcattttgaataatttatgtgaataatt 245  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6895 ttgtaacgccctaatttattatttagttattttatcgagtttagtgtcattttgaataatttatgtgaataatt 6968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 192; Significance: 1e-104; HSPs: 56)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 4 - 259
Target Start/End: Original strand, 30211855 - 30212110
Alignment:
Q  4 agtggagaagcagagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctg 103  Q
    |||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||  |||||||||||||||||| ||    
T  30211855 agtgaagaagctgagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggctggtgaaagtttgacgtgagagttggagagcaagatgttg 30211954  T
Q  104 gagtcgtatccagatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccctaatttattatttagttattt 203  Q
    |||| ||||||||| |||||| |||||| ||||||||||||||| |||||||||||||||||||||| || |||| |||| |||||||||||||||||||    
T  30211955 gagttgtatccagagttatttgaatgaggtacattttcgaggacaaaaatattctaagtgggggagagttataacacccttatttattatttagttattt 30212054  T
Q  204 tatcgagtttagtgtcattttgaataatttatgtgaataattgcgatgtgtgatgt 259  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  30212055 tatcgagtttagtgtcattttgaataatttatgtgaataattgcgatgtctgatgt 30212110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 4 - 170
Target Start/End: Complemental strand, 45529015 - 45528849
Alignment:
Q  4 agtggagaagcagagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctg 103  Q
    |||| |||||| | |||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| || |||||| ||||| |||||||||    
T  45529015 agtgaagaagctgggaggcaaggagatacctcttgtgaaagtcgtttgggaaggagcggctggtgaaagtttgatgtgggagttagagagtaagatgctg 45528916  T
Q  104 gagtcgtatccagatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggaga 170  Q
    |||||||||||||| |||||| |||||| ||||||||||||||||||||||||||||||||||||||    
T  45528915 gagtcgtatccagagttatttgaatgaggtacattttcgaggacgaaaatattctaagtgggggaga 45528849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 20 - 182
Target Start/End: Complemental strand, 24674978 - 24674816
Alignment:
Q  20 ggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatccagatt 119  Q
    |||||||||||||| ||||||| |||||||||||  |||||| | |||||||| ||||||| |||| | ||||| |||||||||||||| |||||||| |    
T  24674978 ggcaaggagataccccttgtgagagtcgtttgggacggagcgactggtgaaagcttgacgtgggagcttgagagtaagatgctggagtcttatccagagt 24674879  T
Q  120 tatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccc 182  Q
    | |||  ||||| || |||||||||||||||||| || ||||| ||||||| |||||||||||    
T  24674878 tgtttgcatgaggtaaattttcgaggacgaaaatcttataagttggggagagttgtaacgccc 24674816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 16 - 182
Target Start/End: Complemental strand, 24709526 - 24709360
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    ||||||||||||||||||||| |||| ||||||||||   |||||| | |||||||| ||||||| |||| | ||||| |||||||||||||| ||||||    
T  24709526 gagaggcaaggagatacctctcgtgagagtcgtttggacgggagcgactggtgaaagcttgacgtgggagcttgagagtaagatgctggagtcttatcca 24709427  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccc 182  Q
    || || |||   |||| || |||||||||||||||||| || ||||||||||||| |||||||||||    
T  24709426 gagttgtttgcttgaggtaaattttcgaggacgaaaatcttttaagtgggggagagttgtaacgccc 24709360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 16 - 182
Target Start/End: Original strand, 44379849 - 44380015
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    ||||||||||||||||||||| |||| ||||||||||  ||||||| | |||||||| |||||||||||| | | ||| |||||||||||||| ||||||    
T  44379849 gagaggcaaggagatacctctcgtgagagtcgtttggttaggagcgactggtgaaagcttgacgtaggagcttgggagtaagatgctggagtcttatcca 44379948  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccc 182  Q
    || || |||   | || || |||||||||||||||||| || ||||||||||||| |||||||||||    
T  44379949 gagttgtttacttaaggtaaattttcgaggacgaaaatcttttaagtgggggagagttgtaacgccc 44380015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 16 - 182
Target Start/End: Original strand, 44386519 - 44386685
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    ||||||||||||||||||||| |||| ||||||||||  ||||||| | |||||||| |||||||||||| | | ||| |||||||||||||| ||||||    
T  44386519 gagaggcaaggagatacctctcgtgagagtcgtttggttaggagcgactggtgaaagcttgacgtaggagcttgggagtaagatgctggagtcttatcca 44386618  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccc 182  Q
    || || |||   | || || |||||||||||||||||| || ||||||||||||| |||||||||||    
T  44386619 gagttgtttacttaaggtaaattttcgaggacgaaaatcttttaagtgggggagagttgtaacgccc 44386685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 16 - 187
Target Start/End: Complemental strand, 23086943 - 23086771
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    ||||||||||||||||||||| || ||||||||||||||||||||||| | |||||||||||| | |||| ||||||| || ||| ||||||| |||| |    
T  23086943 gagaggcaaggagatacctctagtaaaagtcgtttggggaggagcggctgatgaaagtttgacatgggagctggagagtaaaatgatggagtcttatcaa 23086844  T
Q  116 gatttatttcaatg-agatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccctaatt 187  Q
    || ||||||  ||| ||  | ||||||||||||||||||  | ||||| ||||||| ||||||||||||||||    
T  23086843 gagttatttgcatgaagtaatattttcgaggacgaaaattctttaagttggggagagttgtaacgccctaatt 23086771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 16 - 215
Target Start/End: Original strand, 24833523 - 24833722
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    ||||||||| ||||||| |||||||||||||||||||| ||||| ||| || ||||| || |||| ||||||||  |||||||||| ||| || ||||||    
T  24833523 gagaggcaaagagatacttcttgtgaaagtcgtttgggaaggaggggctggagaaagcttaacgtgggagttgggaagcaagatgcaggattcttatcca 24833622  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccctaatttattatttagttattttatcgagtttag 215  Q
    || || |||  ||||  |||||||||||||| ||||||  | ||||| ||||||| ||||||||||||| || |||| ||  ||||||||| ||||||||    
T  24833623 gagttgtttgcatgacgtacattttcgaggatgaaaattctataagttggggagagttgtaacgccctatttaattaattgattattttattgagtttag 24833722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 16 - 182
Target Start/End: Complemental strand, 9609629 - 9609463
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    ||||||||||||||||||||| |||| ||||||||||   |||||| | |||||||| ||||||| |||| | ||||| |||||||||||||| ||||||    
T  9609629 gagaggcaaggagatacctctcgtgagagtcgtttggtcgggagcgactggtgaaagcttgacgtgggagcttgagagtaagatgctggagtcttatcca 9609530  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccc 182  Q
    || || |||   |||| || ||||||||||||||||||  | ||||||||||||| |||||||||||    
T  9609529 gagttgtttgcttgaggtaaattttcgaggacgaaaatcctttaagtgggggagagttgtaacgccc 9609463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 16 - 182
Target Start/End: Complemental strand, 10868343 - 10868177
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    ||||||||||||||||||||| |||| | ||||||||   |||||| | |||||||| ||||||| |||| | ||||| |||||||||||||| ||||||    
T  10868343 gagaggcaaggagatacctctcgtgagaatcgtttggtcgggagcgactggtgaaagcttgacgtgggagcttgagagtaagatgctggagtcttatcca 10868244  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccc 182  Q
    || || |||   |||| || |||||||||||||||||| || ||||||||||||| |||||||||||    
T  10868243 gagttgtttgcttgaggtaaattttcgaggacgaaaatcttttaagtgggggagagttgtaacgccc 10868177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 16 - 182
Target Start/End: Complemental strand, 16924753 - 16924587
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    ||||||||||||||||||||| |||| ||||||||||   |||||| | |||||||| ||||||| |||| | ||||| |||||||||||||| ||||||    
T  16924753 gagaggcaaggagatacctctcgtgagagtcgtttggtcgggagcgactggtgaaagcttgacgtgggagcttgagagtaagatgctggagtcttatcca 16924654  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccc 182  Q
    || || |||   |||| || ||||||||||||||||||  | ||||||||||||| |||||||||||    
T  16924653 gagttgtttgcttgaggtaaattttcgaggacgaaaatcctttaagtgggggagagttgtaacgccc 16924587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 16 - 182
Target Start/End: Complemental strand, 16981645 - 16981479
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    ||||||||||||||||||||| |||| ||||||||||   |||||| | |||||||| ||||||| |||| | ||||| |||||||||||||| ||||||    
T  16981645 gagaggcaaggagatacctctcgtgagagtcgtttggtcgggagcgactggtgaaagcttgacgtgggagcttgagagtaagatgctggagtcttatcca 16981546  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccc 182  Q
    || || |||   |||| || ||||||||||||||||||  | ||||||||||||| |||||||||||    
T  16981545 gagttgtttgcttgaggtaaattttcgaggacgaaaatcctttaagtgggggagagttgtaacgccc 16981479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 16 - 182
Target Start/End: Complemental strand, 16998493 - 16998327
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    ||||||||||||||||||||| |||| ||||||||||   |||||| | |||||||| ||||||| |||| | ||||| |||||||||||||| ||||||    
T  16998493 gagaggcaaggagatacctctcgtgagagtcgtttggtcgggagcgactggtgaaagcttgacgtgggagcttgagagtaagatgctggagtcttatcca 16998394  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccc 182  Q
    || || |||   |||| || ||||||||||||||||||  | ||||||||||||| |||||||||||    
T  16998393 gagttgtttgcttgaggtaaattttcgaggacgaaaatcctttaagtgggggagagttgtaacgccc 16998327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 16 - 182
Target Start/End: Complemental strand, 17063210 - 17063044
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    ||||||||||||||||||||| |||| ||||||||||   |||||| | |||||||| ||||||| |||| | ||||| |||||||||||||| ||||||    
T  17063210 gagaggcaaggagatacctctcgtgagagtcgtttggtcgggagcgactggtgaaagcttgacgtgggagcttgagagtaagatgctggagtcttatcca 17063111  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccc 182  Q
    || || |||   |||| || ||||||||||||||||||  | ||||||||||||| |||||||||||    
T  17063110 gagttgtttgcttgaggtaaattttcgaggacgaaaatcctttaagtgggggagagttgtaacgccc 17063044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 16 - 182
Target Start/End: Complemental strand, 24261863 - 24261697
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    ||||||||||||||||||||| |||| ||||||||||   |||||| | |||||||| ||||||| |||| | ||||| |||||||||||||| ||||||    
T  24261863 gagaggcaaggagatacctctcgtgagagtcgtttggacgggagcgactggtgaaagcttgacgtgggagcttgagagtaagatgctggagtcttatcca 24261764  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccc 182  Q
    || || ||    |||| || |||||||||||||||||| || ||||||||||||| |||||||||||    
T  24261763 gagttgttcgcttgaggtaaattttcgaggacgaaaatcttttaagtgggggagagttgtaacgccc 24261697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 16 - 182
Target Start/End: Complemental strand, 27370762 - 27370596
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    |||| |||||||||||||||| |||| ||||||||||   |||||| | |||||||| ||||||| |||| | ||||| |||||||||||||| ||||||    
T  27370762 gagaagcaaggagatacctctcgtgagagtcgtttggacgggagcgactggtgaaagcttgacgtgggagcttgagagtaagatgctggagtcttatcca 27370663  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccc 182  Q
    || || |||   |||| || |||||||||||||||||| || ||||||||||||| |||||||||||    
T  27370662 gagttgtttgcttgaggtaaattttcgaggacgaaaatcttttaagtgggggagagttgtaacgccc 27370596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 16 - 182
Target Start/End: Original strand, 41609294 - 41609460
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    ||||||||||||||||||||| |||| ||||||||||   |||||| | |||||||| ||||||| |||| | ||||| |||||||||||||  ||||||    
T  41609294 gagaggcaaggagatacctctcgtgagagtcgtttggacgggagcgactggtgaaagcttgacgtgggagcttgagagtaagatgctggagttttatcca 41609393  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccc 182  Q
    || || |||   |||| || |||||||||||||||||| || ||||||||||||| |||||||||||    
T  41609394 gagttgtttgcttgaggtaaattttcgaggacgaaaatcttttaagtgggggagagttgtaacgccc 41609460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 16 - 182
Target Start/End: Original strand, 45676799 - 45676965
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    |||||||||||| ||||| ||||||| |||||||||||  |||||| | |||||||||||||||| |||| | ||||| |||||||||||||| ||||||    
T  45676799 gagaggcaaggaaataccccttgtgagagtcgtttgggacggagcgactggtgaaagtttgacgtgggagcttgagagtaagatgctggagtcttatcca 45676898  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccc 182  Q
    || || |||  ||||| || ||||||||||| |||||| || ||||| ||||||| || ||||||||    
T  45676899 gagttgtttgcatgaggtaaattttcgaggatgaaaatcttataagttggggagagttataacgccc 45676965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 16 - 183
Target Start/End: Complemental strand, 23138530 - 23138364
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    ||||||||| |||||||||||||||| ||||||||||| ||||||| | |||||||| || |||| |||| | ||||| ||||||||||| || ||||||    
T  23138530 gagaggcaatgagatacctcttgtgagagtcgtttgggaaggagcgactggtgaaagcttaacgtgggagctagagagtaagatgctggaatcatatcca 23138431  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccct 183  Q
    || || |||  ||||| || |||||||||||||||||| || | ||| ||||||| ||||||||||||    
T  23138430 gagttgtttgcatgaggtaaattttcgaggacgaaaatcttat-agttggggagagttgtaacgccct 23138364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 16 - 182
Target Start/End: Complemental strand, 27217509 - 27217342
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    ||||||||||||||||||||| |||| ||||||||||   |||||| | |||||||| ||||||| |||| | ||||| |||||||||||||| ||||||    
T  27217509 gagaggcaaggagatacctctcgtgagagtcgtttggtcgggagcgactggtgaaagcttgacgtgggagcttgagagtaagatgctggagtcttatcca 27217410  T
Q  116 gatttatttcaatgagat-acattttcgaggacgaaaatattctaagtgggggagaattgtaacgccc 182  Q
    || || |||   |||| | | |||||||||||||||||| || ||||||||||||| |||||||||||    
T  27217409 gagttgtttgcttgaggtaaaattttcgaggacgaaaatcttttaagtgggggagagttgtaacgccc 27217342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 16 - 215
Target Start/End: Original strand, 24878945 - 24879144
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    ||||||||||||||||| ||| |||| ||||||||||  ||||||| | |||||||| ||||||| |||| | ||||| || ||| ||||||| |||| |    
T  24878945 gagaggcaaggagatacatctcgtgagagtcgtttggacaggagcgactggtgaaagcttgacgtgggagcttgagagtaaaatgttggagtcttatcta 24879044  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccctaatttattatttagttattttatcgagtttag 215  Q
    || || |||   |||| || |||||||||||||||||| || ||||||||||||| |||||||||||   ||| ||| ||  |||||| |||||||||||    
T  24879045 gagttgtttgcttgaggtaaattttcgaggacgaaaatcttttaagtgggggagagttgtaacgcccacttttgttaattgtttatttaatcgagtttag 24879144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 16 - 182
Target Start/End: Complemental strand, 23188501 - 23188335
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    |||||||||||||||||| ||||| | |||||||||||  ||||   | |||||||| ||||||| |||| | ||||| |||||||||||||| ||||||    
T  23188501 gagaggcaaggagataccccttgttagagtcgtttgggctggagtaactggtgaaagcttgacgtgggagcttgagagtaagatgctggagtcttatcca 23188402  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccc 182  Q
    || || |||   | || || |||||||||||||||||| || ||||||||||||| |||||||||||    
T  23188401 gagttgtttgcttaaggtaaattttcgaggacgaaaatcttttaagtgggggagagttgtaacgccc 23188335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 16 - 182
Target Start/End: Complemental strand, 23599764 - 23599598
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    |||||||||||||||||| ||||| | |||||||||||  ||||   | |||||||| ||||||| |||| | ||||| |||||||||||||| ||||||    
T  23599764 gagaggcaaggagataccccttgttagagtcgtttgggctggagtaactggtgaaagcttgacgtgggagcttgagagtaagatgctggagtcttatcca 23599665  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccc 182  Q
    || || |||   | || || |||||||||||||||||| || ||||||||||||| |||||||||||    
T  23599664 gagttgtttgcttaaggtaaattttcgaggacgaaaatcttttaagtgggggagagttgtaacgccc 23599598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 138 - 254
Target Start/End: Original strand, 36734058 - 36734174
Alignment:
Q  138 tttcgaggacgaaaatattctaagtgggggagaattgtaacgccctaatttattatttagttattttatcgagtttagtgtcattttgaataatttatgt 237  Q
    |||||||||||||| | || |||| |||  ||| ||||||| ||||| ||||||||||| |||||||||||||||||||||| ||||| ||||||||| |    
T  36734058 tttcgaggacgaaattcttttaagggggatagagttgtaacaccctattttattatttatttattttatcgagtttagtgtctttttgtataatttattt 36734157  T
Q  238 gaataattgcgatgtgt 254  Q
    ||||||||| |||||||    
T  36734158 gaataattgtgatgtgt 36734174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 16 - 183
Target Start/End: Complemental strand, 23550320 - 23550154
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    ||||||||| |||||||||||||||| ||||||||||| ||||||| | |||||||| || |||| |||  | ||||| |||||| |||| || ||||||    
T  23550320 gagaggcaatgagatacctcttgtgagagtcgtttgggaaggagcgactggtgaaagcttaacgtgggaaatagagagtaagatgatggaatcatatcca 23550221  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccct 183  Q
    || || |||  ||||| || |||||||||||||||||| || | ||| ||||||| ||||||||||||    
T  23550220 gagttgtttgcatgaggtaaattttcgaggacgaaaatcttat-agttggggagagttgtaacgccct 23550154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 16 - 114
Target Start/End: Original strand, 11358824 - 11358922
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcc 114  Q
    |||||| || |||||||||||||||| |||||||||||| |||||||| |||||||||||||| | |||| ||||||| ||||||| ||||||||||||    
T  11358824 gagaggtaaagagatacctcttgtgagagtcgtttggggtggagcggctggtgaaagtttgacttgggagctggagagtaagatgcgggagtcgtatcc 11358922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 16 - 206
Target Start/End: Complemental strand, 20832475 - 20832286
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    |||||| || |||||||||||||||| |||||||||||| |||||||| |||||||||||||| | |||| ||||||| | ||||| ||||||||||||     
T  20832475 gagaggtaaagagatacctcttgtgagagtcgtttggggtggagcggctggtgaaagtttgacttgggagctggagagtaggatgcgggagtcgtatccg 20832376  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccctaatttattatttagttattttat 206  Q
    || || |||   |||| ||   ||||||||||| ||||  | ||| | ||||||| ||||||||||||| ||  ||||||| |||||||||    
T  20832375 gagttgtttgcttgaggtaagatttcgaggacg-aaattctgtaatttggggagagttgtaacgccctagttatttatttaattattttat 20832286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 16 - 206
Target Start/End: Complemental strand, 31830148 - 31829959
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    |||||| || |||||||||||||||| |||||||||||| |||||| | |||||||||||||| | |||| ||||||| ||||||| ||||||||||||     
T  31830148 gagaggtaaagagatacctcttgtgagagtcgtttggggtggagcgactggtgaaagtttgacttgggagctggagagtaagatgcgggagtcgtatccg 31830049  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccctaatttattatttagttattttat 206  Q
    || || |||   |||| ||   ||||||||||| ||||  | ||| | ||||||| ||||||||||||| ||  ||||||| |||||||||    
T  31830048 gagttgtttgcttgaggtaagatttcgaggacg-aaattctgtaatttggggagagttgtaacgccctagttatttatttaattattttat 31829959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 16 - 114
Target Start/End: Complemental strand, 1063241 - 1063143
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcc 114  Q
    |||||| || |||||||||||||||| |||||||||||| |||||| | |||||||||||||| | |||| ||||||| ||||||| ||||||||||||    
T  1063241 gagaggtaaagagatacctcttgtgagagtcgtttggggtggagcgactggtgaaagtttgacttgggagctggagagtaagatgcgggagtcgtatcc 1063143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 16 - 182
Target Start/End: Original strand, 21145981 - 21146147
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    ||||||||||||||||||||| |||| ||||||||||   || ||| |  ||||||| | ||||| |||| | ||||| |||||| ||||||| ||||||    
T  21145981 gagaggcaaggagatacctctcgtgagagtcgtttggacgggggcgactcgtgaaagctagacgtgggagcttgagagtaagatgatggagtcttatcca 21146080  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccc 182  Q
    || || |||   | || || |||||||||||||||||| || ||||||||||||| |||||||||||    
T  21146081 gagttgtttgcttaaggtaaattttcgaggacgaaaatcttttaagtgggggagagttgtaacgccc 21146147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 16 - 182
Target Start/End: Complemental strand, 23061792 - 23061626
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    |||||||||||||||||||||||||| |||||||||||   || || | |||||||| || |||| |||| |  |||| ||||||||||| || ||||||    
T  23061792 gagaggcaaggagatacctcttgtgagagtcgtttgggacagaacgactggtgaaagcttaacgtgggagctacagagtaagatgctggaatcttatcca 23061693  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccc 182  Q
    || || |||   |||| || ||||||||||| |||||| || ||||| ||||||| |||||||||||    
T  23061692 gagttgtttgtttgaggtaaattttcgaggatgaaaatcttataagttggggagagttgtaacgccc 23061626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 173 - 254
Target Start/End: Original strand, 20005635 - 20005716
Alignment:
Q  173 tgtaacgccctaatttattatttagttattttatcgagtttagtgtcattttgaataatttatgtgaataattgcgatgtgt 254  Q
    |||||| ||||| ||||||||||| |||||||||||||||||||||| ||||| ||||||||| |||||||||| |||||||    
T  20005635 tgtaacaccctattttattatttatttattttatcgagtttagtgtctttttgtataatttatttgaataattgtgatgtgt 20005716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 173 - 254
Target Start/End: Original strand, 28344643 - 28344724
Alignment:
Q  173 tgtaacgccctaatttattatttagttattttatcgagtttagtgtcattttgaataatttatgtgaataattgcgatgtgt 254  Q
    |||||||| ||| ||||||||||| |||||||||||||||||||||| ||||| ||||||||| |||||||||| |||||||    
T  28344643 tgtaacgctctattttattatttatttattttatcgagtttagtgtctttttgtataatttatttgaataattgtgatgtgt 28344724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 110 - 235
Target Start/End: Complemental strand, 30800381 - 30800257
Alignment:
Q  110 tatccagatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccctaatttattatttagttattttatcga 209  Q
    |||||||| || ||| |||||| |||||||||||||||||||||||| ||||||||||||| || ||||||||| |||  ||||||| ||||||||| |     
T  30800381 tatccagagttgtttgaatgaggtacattttcgaggacgaaaatattttaagtgggggagagttataacgccct-attatttatttaattattttattgg 30800283  T
Q  210 gtttagtgtcattttgaataatttat 235  Q
    |||||| ||| ||| || ||||||||    
T  30800282 gtttagagtcctttagagtaatttat 30800257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 16 - 184
Target Start/End: Complemental strand, 23265708 - 23265541
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    |||||||||||| |||||||| ||||| || |||||||| ||||   | |||||||||||||| | |||| ||||||| ||||||| |||||| ||||||    
T  23265708 gagaggcaaggatatacctctagtgaaggttgtttggggtggagtaactggtgaaagtttgacttgggagctggagagtaagatgcgggagtcttatcca 23265609  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgcccta 184  Q
    || || ||| | |||| ||   ||||||||||| ||||  ||||||| ||||||| |||||||||||||    
T  23265608 gagttgtttgattgaggtaagatttcgaggacg-aaattctctaagttggggagagttgtaacgcccta 23265541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 133 - 203
Target Start/End: Complemental strand, 19647613 - 19647543
Alignment:
Q  133 tacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccctaatttattatttagttattt 203  Q
    ||||||||  |||||||||||||||||||||||||||| ||||||||||||| ||||||||||| ||||||    
T  19647613 tacattttttaggacgaaaatattctaagtgggggagagttgtaacgccctattttattatttatttattt 19647543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 56 - 182
Target Start/End: Original strand, 27385700 - 27385826
Alignment:
Q  56 ggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatccagatttatttcaatgagatacattttcgaggacgaaaatat 155  Q
    |||||| | |||||||| ||||||| |||| | ||||| |||||||||||||| |||||||| || |||   |||| || |||||||||||||||||| |    
T  27385700 ggagcgactggtgaaagcttgacgtgggagcttgagagtaagatgctggagtcttatccagagttgtttgcttgaggtaaattttcgaggacgaaaatct 27385799  T
Q  156 tctaagtgggggagaattgtaacgccc 182  Q
    | ||||| ||||||| |||||||||||    
T  27385800 tttaagttggggagagttgtaacgccc 27385826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 173 - 254
Target Start/End: Complemental strand, 45536313 - 45536232
Alignment:
Q  173 tgtaacgccctaatttattatttagttattttatcgagtttagtgtcattttgaataatttatgtgaataattgcgatgtgt 254  Q
    |||||||| ||| ||||||||||| |||||||||||||||||||||| ||||| ||||||||| ||| |||||| |||||||    
T  45536313 tgtaacgcgctattttattatttatttattttatcgagtttagtgtctttttgtataatttatttgattaattgtgatgtgt 45536232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 16 - 108
Target Start/End: Original strand, 22757413 - 22757505
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtc 108  Q
    |||||||||||||||| ||||||||  |||||||||||  |||||| | |||||||| ||||||| |||| ||||||| ||||||||||||||    
T  22757413 gagaggcaaggagatatctcttgtgcgagtcgtttgggatggagcgactggtgaaagcttgacgtgggagctggagagtaagatgctggagtc 22757505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 151
Target Start/End: Complemental strand, 24653838 - 24653703
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    |||||||||||| |||||||| ||||| || |||||||| ||||   ||||||| |||||||| | |||| ||||||| ||||||| |||||||||||||    
T  24653838 gagaggcaaggatatacctctagtgaaggttgtttggggtggagtaaccggtgagagtttgacttgggagctggagagtaagatgcgggagtcgtatcca 24653739  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaa 151  Q
    || || ||| | |||| ||   ||||||||||||||    
T  24653738 gagttgtttgattgaggtaagatttcgaggacgaaa 24653703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 28 - 182
Target Start/End: Original strand, 21326228 - 21326382
Alignment:
Q  28 gatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatccagatttatttcaa 127  Q
    |||||| ||||| | |||||||| ||  |||||| | |||||||| || |||| |||| | ||||| ||||||||||| || |||||||| || |||       
T  21326228 gataccccttgttagagtcgtttaggacggagcgactggtgaaagcttaacgtgggagcttgagagtaagatgctggaatcttatccagagttgtttgct 21326327  T
Q  128 tgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccc 182  Q
    |||| || |||||||||||||||||| || ||||| ||||||| |||||||||||    
T  21326328 tgaggtaaattttcgaggacgaaaatcttataagttggggagagttgtaacgccc 21326382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 65 - 182
Target Start/End: Original strand, 22325841 - 22325958
Alignment:
Q  65 ggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatccagatttatttcaatgagatacattttcgaggacgaaaatattctaagtgg 164  Q
    |||||||| ||||||| |||| | ||||| |||||||||||||| |||||||| || |||   | || |  |||||||||||||||||| || |||||||    
T  22325841 ggtgaaagcttgacgtgggagcttgagagtaagatgctggagtcttatccagagttgtttgcttaaggtgaattttcgaggacgaaaatcttttaagtgg 22325940  T
Q  165 gggagaattgtaacgccc 182  Q
    |||||| |||||||||||    
T  22325941 gggagagttgtaacgccc 22325958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 173 - 254
Target Start/End: Complemental strand, 23801799 - 23801718
Alignment:
Q  173 tgtaacgccctaatttattatttagttattttatcgagtttagtgtcattttgaataatttatgtgaataattgcgatgtgt 254  Q
    |||||| ||||| ||||||||||| ||||||||| |||||||||||| ||||| ||||| ||| |||||||||| |||||||    
T  23801799 tgtaacaccctattttattatttatttattttattgagtttagtgtctttttgtataatgtatttgaataattgtgatgtgt 23801718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 184
Target Start/End: Original strand, 27366029 - 27366196
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    |||||| || |||||||| ||||||| |||||||||||| |||||| | || |||||||| || | |||| |||| || ||||||| ||||||||| |||    
T  27366029 gagaggtaaagagataccgcttgtgagagtcgtttggggtggagcgactggagaaagtttaacttgggagctggaaagtaagatgcgggagtcgtaccca 27366128  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgcccta 184  Q
    || || |||   |||| ||   ||||||||||| ||||  ||||||| ||||||| |||||||||||||    
T  27366129 gagttgtttgtttgaggtaagatttcgaggacg-aaatcctctaagttggggagagttgtaacgcccta 27366196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 16 - 178
Target Start/End: Complemental strand, 23293451 - 23293290
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    |||||||||||| |||||||| ||||| || ||| |||| ||||   ||||||| |||||||| | |||| ||||||| ||||||| |||||||||||||    
T  23293451 gagaggcaaggatatacctctagtgaaggttgttgggggtggagtaaccggtgagagtttgacttgggagctggagagtaagatgcgggagtcgtatcca 23293352  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaac 178  Q
     | || ||| | |||| ||   ||||||||||| ||||  ||||||| ||||||| |||||||    
T  23293351 aagttgtttgattgaggtaagatttcgaggacg-aaattctctaagttggggagagttgtaac 23293290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 187
Target Start/End: Complemental strand, 28350604 - 28350545
Alignment:
Q  128 tgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccctaatt 187  Q
    |||| |||||||||||||||||||||  | ||||| ||||||| ||||||||||||||||    
T  28350604 tgaggtacattttcgaggacgaaaattctttaagttggggagagttgtaacgccctaatt 28350545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 101
Target Start/End: Complemental strand, 23276269 - 23276184
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgc 101  Q
    |||||||||||| |||||||| ||||| || |||||||| ||||   | |||||||||||||| | |||| ||||||| |||||||    
T  23276269 gagaggcaaggatatacctctagtgaaggttgtttggggtggagtaactggtgaaagtttgacttgggagctggagagtaagatgc 23276184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 215
Target Start/End: Original strand, 10743608 - 10743650
Alignment:
Q  173 tgtaacgccctaatttattatttagttattttatcgagtttag 215  Q
    |||||||||||| ||||||||||| ||||||||| ||||||||    
T  10743608 tgtaacgccctattttattatttatttattttattgagtttag 10743650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 182
Target Start/End: Complemental strand, 12830410 - 12830368
Alignment:
Q  140 tcgaggacgaaaatattctaagtgggggagaattgtaacgccc 182  Q
    |||||||||||||| || ||||||||||||| |||||||||||    
T  12830410 tcgaggacgaaaatcttttaagtgggggagagttgtaacgccc 12830368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 204
Target Start/End: Complemental strand, 19802785 - 19802721
Alignment:
Q  138 tttcgaggacgaaaatattctaagtgggggagaattgtaacgccctaatttattatttagttatttt 204  Q
    |||||||||||||| | || ||||| ||||||| |||||||||||||| |||||||||| |||||||    
T  19802785 tttcgaggacgaaattctt-taagttggggagagttgtaacgccctaa-ttattatttaattatttt 19802721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 215
Target Start/End: Original strand, 23968109 - 23968151
Alignment:
Q  173 tgtaacgccctaatttattatttagttattttatcgagtttag 215  Q
    |||||||||||| ||||||||||| ||||||||| ||||||||    
T  23968109 tgtaacgccctattttattatttatttattttattgagtttag 23968151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 107
Target Start/End: Complemental strand, 24944859 - 24944769
Alignment:
Q  17 agaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagt 107  Q
    ||||||||||| |||||||| ||||| || |||||||| ||||   | ||||| |||||||| | |||| ||||||| ||||||| |||||    
T  24944859 agaggcaaggatatacctctagtgaaggttgtttggggtggagtaactggtgagagtttgacttgggagctggagagtaagatgcgggagt 24944769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 215
Target Start/End: Complemental strand, 25142774 - 25142732
Alignment:
Q  173 tgtaacgccctaatttattatttagttattttatcgagtttag 215  Q
    |||||||||||| ||||||||||| ||||||||| ||||||||    
T  25142774 tgtaacgccctattttattatttatttattttattgagtttag 25142732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 173 - 214
Target Start/End: Complemental strand, 23613707 - 23613666
Alignment:
Q  173 tgtaacgccctaatttattatttagttattttatcgagttta 214  Q
    |||||||||||| ||||||||||| ||||||||| |||||||    
T  23613707 tgtaacgccctattttattatttatttattttattgagttta 23613666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 173 - 214
Target Start/End: Complemental strand, 25085925 - 25085884
Alignment:
Q  173 tgtaacgccctaatttattatttagttattttatcgagttta 214  Q
    |||||||||||| ||||||||||| ||||||||| |||||||    
T  25085925 tgtaacgccctattttattatttatttattttattgagttta 25085884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 172 - 235
Target Start/End: Complemental strand, 30800729 - 30800665
Alignment:
Q  172 ttgtaacgccctaatttatt-atttagttattttatcgagtttagtgtcattttgaataatttat 235  Q
    ||||||||||||| |||||| ||||| |||||||||  ||||||| ||| ||| |||||||||||    
T  30800729 ttgtaacgccctattttatttatttaattattttatttagtttagagtcctttagaataatttat 30800665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 181; Significance: 7e-98; HSPs: 62)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 181; E-Value: 7e-98
Query Start/End: Original strand, 4 - 244
Target Start/End: Complemental strand, 21661827 - 21661587
Alignment:
Q  4 agtggagaagcagagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctg 103  Q
    |||| |||||| ||||||||||||||| |||||||||||||| |||||||||| || ||| |||||||||||||||| ||||||||||||||||||||||    
T  21661827 agtgaagaagctgagaggcaaggagatgcctcttgtgaaagttgtttggggagaagtggctggtgaaagtttgacgtgggagttggagagcaagatgctg 21661728  T
Q  104 gagtcgtatccagatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccctaatttattatttagttattt 203  Q
    |||||||||||| | |||||| |||||| |||||||||||||||||||||||||||||| ||||||| ||||||| ||||||||||||||||||||||||    
T  21661727 gagtcgtatccaaagttatttgaatgaggtacattttcgaggacgaaaatattctaagttggggagagttgtaacaccctaatttattatttagttattt 21661628  T
Q  204 tatcgagtttagtgtcattttgaataatttatgtgaataat 244  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  21661627 tatcgagtttagtgtcattttgaataatttatgtgaataat 21661587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 18 - 215
Target Start/End: Complemental strand, 15203728 - 15203531
Alignment:
Q  18 gaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatccaga 117  Q
    |||||||||||||||||||||||||| ||||||||| ||||||||| |||||||| || |||| ||||||||| |||||||| || ||||| ||||||||    
T  15203728 gaggcaaggagatacctcttgtgaaattcgtttgggaaggagcggctggtgaaagcttaacgtgggagttggaaagcaagatactagagtcttatccaga 15203629  T
Q  118 tttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccctaatttattatttagttattttatcgagtttag 215  Q
     || |||  ||||| |||||||||||||||||||||  | ||||| ||||||| ||||||||||||| || |||||||  ||||||||| ||||||||    
T  15203628 gttgtttgcatgaggtacattttcgaggacgaaaattctataagttggggagagttgtaacgccctatttaattatttgattattttattgagtttag 15203531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 16 - 182
Target Start/End: Complemental strand, 14332248 - 14332082
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    ||||||||||||||||||||| |||| ||||||||||   |||||| | |||||||| ||||||| |||| | ||||| |||||||||||||| ||||||    
T  14332248 gagaggcaaggagatacctctcgtgagagtcgtttggtcgggagcgactggtgaaagcttgacgtgggagcttgagagtaagatgctggagtcttatcca 14332149  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccc 182  Q
    || || |||   |||| || |||||||||||||||||| || ||||||||||||| |||||||||||    
T  14332148 gagttgtttgcttgaggtaaattttcgaggacgaaaatcttttaagtgggggagagttgtaacgccc 14332082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 16 - 182
Target Start/End: Original strand, 23517188 - 23517354
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    ||||||||||||||||||||| |||| ||||||||||   |||||| | |||||||| ||||||| |||| | ||||| |||||||||||||| ||||||    
T  23517188 gagaggcaaggagatacctctcgtgagagtcgtttggacgggagcgactggtgaaagcttgacgtgggagcttgagagtaagatgctggagtcttatcca 23517287  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccc 182  Q
    || || |||   |||| || |||||||||||||||||| || ||||||||||||| |||||||||||    
T  23517288 gagttgtttgcttgaggtaaattttcgaggacgaaaatcttttaagtgggggagagttgtaacgccc 23517354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 19 - 182
Target Start/End: Complemental strand, 8707453 - 8707290
Alignment:
Q  19 aggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatccagat 118  Q
    |||||||||||||||||| |||| ||||||||||   |||||| | |||||||| ||||||| |||| | ||||| |||||||||||||| ||||||||     
T  8707453 aggcaaggagatacctctcgtgagagtcgtttggacgggagcgactggtgaaagcttgacgtgggagcttgagagtaagatgctggagtcttatccagag 8707354  T
Q  119 ttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccc 182  Q
    || |||   |||| || |||||||||||||||||| || ||||||||||||| |||||||||||    
T  8707353 ttgtttgcttgaggtaaattttcgaggacgaaaatcttttaagtgggggagagttgtaacgccc 8707290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 16 - 183
Target Start/End: Original strand, 12254457 - 12254624
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    ||||||||| |||||||||||||||||||||||||||| ||||||| | |||||||| || |||| |||| | ||||| ||||||||||| || ||||||    
T  12254457 gagaggcaaagagatacctcttgtgaaagtcgtttgggaaggagcgactggtgaaagcttaacgtgggagctagagagtaagatgctggaatcttatcca 12254556  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccct 183  Q
    || || |||  ||||| || |||||||||||||||||  || ||||| ||||||| |||||| |||||    
T  12254557 gagttgtttgcatgaggtaaattttcgaggacgaaaaccttataagttggggagagttgtaatgccct 12254624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 16 - 215
Target Start/End: Complemental strand, 14347688 - 14347489
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    ||||||||| ||||||||||||||||||||| ||||||  |||||| | | |||||| || || | |||||||||||| |||||||||||||| ||||||    
T  14347688 gagaggcaaagagatacctcttgtgaaagtcatttgggatggagcgactgatgaaagcttaacatgggagttggagagtaagatgctggagtcttatcca 14347589  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccctaatttattatttagttattttatcgagtttag 215  Q
    || || |||   |||| || |||||||||||||||||| || ||||| ||||||| |||||||||||   || |||| ||| ||||||| | ||||||||    
T  14347588 gagttgtttgcttgaggtaaattttcgaggacgaaaatcttataagttggggagagttgtaacgcccattttgattaattaattattttgttgagtttag 14347489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 16 - 182
Target Start/End: Complemental strand, 10870846 - 10870680
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    ||||||||||||||||||||| |||| ||||||||||   |||||| | |||||||| ||||||| |||| | ||||| ||||||||||||||||||| |    
T  10870846 gagaggcaaggagatacctctcgtgagagtcgtttggtcgggagcgactggtgaaagcttgacgtgggagcttgagagtaagatgctggagtcgtatcaa 10870747  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccc 182  Q
    || || |||   | || || |||||||||||||||||| || ||||||||||||| |||||||||||    
T  10870746 gagttgtttacttaaggtaaattttcgaggacgaaaatcttttaagtgggggagagttgtaacgccc 10870680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 16 - 182
Target Start/End: Original strand, 11237632 - 11237798
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    ||||||||||||||||||||| |||| ||||||||||   |||||| | |||||||| ||||||| |||| | ||||| |||||||||||||| ||||||    
T  11237632 gagaggcaaggagatacctctcgtgagagtcgtttggacgggagcgactggtgaaagcttgacgtgggagcttgagagtaagatgctggagtcttatcca 11237731  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccc 182  Q
    || || |||   |||| || |||||||||||||||||| || ||||||||||||| ||| |||||||    
T  11237732 gagttgtttgcttgaggtaaattttcgaggacgaaaatcttttaagtgggggagagttgaaacgccc 11237798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 16 - 182
Target Start/End: Original strand, 15161476 - 15161642
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    ||||||||||||||||||||| |||| ||||||||||   |||||| | |||||||| ||||||| |||| | ||||| |||||||||||||| ||||||    
T  15161476 gagaggcaaggagatacctctcgtgagagtcgtttggacgggagcgactggtgaaagcttgacgtgggagcttgagagtaagatgctggagtcttatcca 15161575  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccc 182  Q
    || || |||   |||| || |||||||||||||||||| || |||| |||||||| |||||||||||    
T  15161576 gagttgtttgcttgaggtaaattttcgaggacgaaaatcttttaagagggggagagttgtaacgccc 15161642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 16 - 182
Target Start/End: Original strand, 18552177 - 18552343
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    ||||| ||||||||||||||| |||| ||||||||||   |||||| | |||||||| ||||||| |||| | ||||| |||||||||||||| ||||||    
T  18552177 gagagacaaggagatacctctcgtgagagtcgtttggacgggagcgactggtgaaagcttgacgtgggagcttgagagtaagatgctggagtcttatcca 18552276  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccc 182  Q
    || || |||   |||| || |||||||||||||||||| || ||||||||||||| |||||||||||    
T  18552277 gagttgtttgcttgaggtaaattttcgaggacgaaaatcttttaagtgggggagagttgtaacgccc 18552343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 16 - 182
Target Start/End: Original strand, 17735 - 17902
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    |||||||||||||||||| ||||| | |||||||||||  |||||| | |||||||| ||||||| |||| | ||||| |||||||||||||| ||||||    
T  17735 gagaggcaaggagataccccttgttagagtcgtttgggctggagcgactggtgaaagcttgacgtgggagcttgagagtaagatgctggagtcttatcca 17834  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggaga-attgtaacgccc 182  Q
    || || |||   |||| || |||||||||||||||||| || |||||||||||||  |||||||||||    
T  17835 gagttgtttgcttgaggtaaattttcgaggacgaaaatcttttaagtgggggagagtttgtaacgccc 17902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 16 - 182
Target Start/End: Complemental strand, 8198479 - 8198313
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    ||||||||||||||||||||| || | ||||||||||   |||||| | |||||||| ||||||| |||| | ||||| |||||||||||||| ||||||    
T  8198479 gagaggcaaggagatacctctcgtaagagtcgtttggtcgggagcgactggtgaaagcttgacgtgggagcttgagagtaagatgctggagtcttatcca 8198380  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccc 182  Q
    || || ||    |||| || |||||||||||||||||| || ||||||||||||| |||||||||||    
T  8198379 gagttgttcgcttgaggtaaattttcgaggacgaaaatcttttaagtgggggagagttgtaacgccc 8198313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 16 - 182
Target Start/End: Original strand, 11553521 - 11553687
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    |||||| || ||||||||||| |||| ||||||||||   |||||| | |||||||| ||||||| |||| | ||||| |||||||||||||| ||||||    
T  11553521 gagaggtaaagagatacctctcgtgagagtcgtttggacgggagcgactggtgaaagcttgacgtgggagcttgagagtaagatgctggagtcttatcca 11553620  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccc 182  Q
    || || |||   |||| || |||||||||||||||||| || ||||||||||||| |||||||||||    
T  11553621 gagttgtttgcttgaggtaaattttcgaggacgaaaatcttttaagtgggggagagttgtaacgccc 11553687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 16 - 182
Target Start/End: Complemental strand, 12687352 - 12687186
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    ||||||||| ||||||||||| |||| ||||||||||   |||||| | |||||||| ||||||| |||| | | ||| |||||||||||||| ||||||    
T  12687352 gagaggcaaagagatacctctcgtgagagtcgtttggtcgggagcgactggtgaaagcttgacgtgggagcttgggagtaagatgctggagtcttatcca 12687253  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccc 182  Q
    || || |||   |||| || |||||||||||||||||| || ||||||||||||| |||||||||||    
T  12687252 gaattgttttcttgaggtaaattttcgaggacgaaaatcttttaagtgggggagagttgtaacgccc 12687186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 16 - 182
Target Start/End: Complemental strand, 13685914 - 13685748
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    ||||||||||||||||||||| |||| ||||||||||   |||||| | |||||||  ||||||| |||| | ||||| |||||||||||||| ||||||    
T  13685914 gagaggcaaggagatacctctcgtgagagtcgtttggacgggagcgactggtgaaaacttgacgtgggagcttgagagtaagatgctggagtcttatcca 13685815  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccc 182  Q
    || || |||   |||| || |||||||||||||||||| || |||| |||||||| |||||||||||    
T  13685814 gagttgtttgcttgaggtaaattttcgaggacgaaaatcttttaagagggggagagttgtaacgccc 13685748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 16 - 184
Target Start/End: Original strand, 11388824 - 11388991
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    |||||| || |||||||||||||||| |||||||||||| |||||| | |||||||||||||| | |||| ||||||| ||||||| |||||| ||||||    
T  11388824 gagaggtaaagagatacctcttgtgagagtcgtttggggtggagcgactggtgaaagtttgacttgggagctggagagtaagatgcgggagtcttatcca 11388923  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgcccta 184  Q
    || || ||||  |||| ||   ||||||||||| ||||  ||||||| ||||||| |||||||||||||    
T  11388924 gagttgtttccttgaggtaagatttcgaggacg-aaattctctaagttggggagagttgtaacgcccta 11388991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 16 - 215
Target Start/End: Complemental strand, 14037658 - 14037459
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    ||||||||| ||||||||||||||||||||| |||||| |||||||   | ||||||  | || | ||||||||| || |||||||||||||| ||||||    
T  14037658 gagaggcaaagagatacctcttgtgaaagtcatttgggaaggagcgaatgatgaaagcataacatgggagttggaaagtaagatgctggagtcttatcca 14037559  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccctaatttattatttagttattttatcgagtttag 215  Q
    || || |||   |||| || |||||||||||||||||| || ||||| ||||||| |||||||||||   || |||| ||| ||||||| | ||||||||    
T  14037558 gagttgtttgcttgaggtaaattttcgaggacgaaaatcttataagttggggagagttgtaacgcccattttgattaattaattattttgttgagtttag 14037459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 16 - 182
Target Start/End: Original strand, 15163840 - 15164005
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    ||||||||| |||||||||||||||| ||||||||||| ||||||| | |||||||| || |||| |||| | ||||| ||||||||||| || |||||     
T  15163840 gagaggcaaagagatacctcttgtgagagtcgtttgggaaggagcgactggtgaaagcttaacgtgggagctagagagtaagatgctggaatcttatccg 15163939  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccc 182  Q
    || || |||  ||||| || |||||||||||||||||| || |||||  |||||| |||||||||||    
T  15163940 gagttgtttgcatgaggtaaattttcgaggacgaaaatcttttaagt-tgggagagttgtaacgccc 15164005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 20 - 182
Target Start/End: Complemental strand, 18177589 - 18177427
Alignment:
Q  20 ggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatccagatt 119  Q
    ||||||||||||||||| |||| ||||||||||   |||||| | |||||||| ||||||| |||| | ||||  |||||||||||||| ||||| || |    
T  18177589 ggcaaggagatacctctcgtgagagtcgtttggtcgggagcgactggtgaaagcttgacgtgggagcttgagaataagatgctggagtcttatccggagt 18177490  T
Q  120 tatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccc 182  Q
    | |||   |||| || |||||||||||||||||| || ||||||||||||| |||||||||||    
T  18177489 tgtttgcttgaggtaaattttcgaggacgaaaatcttttaagtgggggagagttgtaacgccc 18177427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 16 - 182
Target Start/End: Original strand, 44791770 - 44791936
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    ||||||||||||||||||||| || | ||||||||||   |||||| | |||||||| ||||||| |||| | ||||| |||||||||||||| ||||||    
T  44791770 gagaggcaaggagatacctctcgtcagagtcgtttggtcgggagcgactggtgaaagcttgacgtgggagcttgagagtaagatgctggagtcttatcca 44791869  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccc 182  Q
    || || |||   |||| || |||||||||||||||| |  | ||||||||||||| |||||||||||    
T  44791870 gagttgtttgcttgaggtaaattttcgaggacgaaagtcctttaagtgggggagagttgtaacgccc 44791936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 16 - 206
Target Start/End: Original strand, 11306663 - 11306852
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    |||||| || |||||||||||||||| |||||||||||| |||||| | |||||||||||||| | |||| ||||||| ||||||| ||||||||||||     
T  11306663 gagaggtaaagagatacctcttgtgagagtcgtttggggtggagcgactggtgaaagtttgacttgggagctggagagtaagatgcgggagtcgtatccg 11306762  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccctaatttattatttagttattttat 206  Q
    || || |||   |||| ||   ||||||||||| ||||  | ||| | ||||||| ||||||||||||| ||  ||||||| |||||||||    
T  11306763 gagttgtttgcttgaggtaagatttcgaggacg-aaattctgtaatttggggagagttgtaacgccctagttatttatttaattattttat 11306852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 16 - 178
Target Start/End: Original strand, 13634140 - 13634302
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    |||||||||||||||||| ||||| | |||||||||||  |||||| | |||||||| ||||||| |||| | ||||| |||||||||||||| ||||||    
T  13634140 gagaggcaaggagataccccttgttagagtcgtttgggctggagcgactggtgaaagcttgacgtgggagcttgagagtaagatgctggagtcttatcca 13634239  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaac 178  Q
    || || |||   |||| || ||||| |||||||||||| || |||||  |||||| |||||||    
T  13634240 gagttgtttgcttgaggtaaatttttgaggacgaaaatcttttaagttcgggagagttgtaac 13634302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 173 - 254
Target Start/End: Complemental strand, 33060828 - 33060747
Alignment:
Q  173 tgtaacgccctaatttattatttagttattttatcgagtttagtgtcattttgaataatttatgtgaataattgcgatgtgt 254  Q
    |||||||||||| ||||||||||| |||||||||||||||||||||| ||||| ||||||||| |||||||||| |||||||    
T  33060828 tgtaacgccctattttattatttatttattttatcgagtttagtgtctttttgtataatttatttgaataattgtgatgtgt 33060747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 16 - 184
Target Start/End: Complemental strand, 13665419 - 13665252
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    ||||||||| || |||||||| ||||| || |||||||| ||||   ||||||| |||||||| | |||| ||||||| ||||||| |||||||||||||    
T  13665419 gagaggcaaagatatacctctagtgaaggttgtttggggtggagtaaccggtgagagtttgacttgggagctggagagtaagatgcgggagtcgtatcca 13665320  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgcccta 184  Q
    || || ||| | |||| ||   ||||||||||| ||||  ||||||| |||||||||||||||||||||    
T  13665319 gagttgtttgattgaggtaagatttcgaggacg-aaattctctaagttggggagaattgtaacgcccta 13665252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 16 - 114
Target Start/End: Original strand, 8212528 - 8212626
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcc 114  Q
    |||||| || |||||||||||||||| |||||||||||| |||||| | |||||||||||||| | |||| ||||||| ||||||| ||||||||||||    
T  8212528 gagaggtaaagagatacctcttgtgagagtcgtttggggtggagcgactggtgaaagtttgacttgggagctggagagtaagatgcgggagtcgtatcc 8212626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 16 - 206
Target Start/End: Original strand, 26118981 - 26119170
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    |||||| || |||||||||||||||| |||||||||||| |||||| | | |||||||||||| | |||| ||||||| ||||||| ||||||||||||     
T  26118981 gagaggtaaagagatacctcttgtgagagtcgtttggggtggagcgactgatgaaagtttgacttgggagctggagagtaagatgcgggagtcgtatccg 26119080  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccctaatttattatttagttattttat 206  Q
    || || |||   |||| ||   ||||||||||| ||||  | ||| | ||||||| ||||||||||||| ||  ||||||| |||||||||    
T  26119081 gagttgtttgcttgaggtaagatttcgaggacg-aaattctgtaatttggggagagttgtaacgccctagttatttatttaattattttat 26119170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 173 - 254
Target Start/End: Complemental strand, 38300187 - 38300106
Alignment:
Q  173 tgtaacgccctaatttattatttagttattttatcgagtttagtgtcattttgaataatttatgtgaataattgcgatgtgt 254  Q
    |||||||||||| ||||||||||| ||||||||| |||||||||||| ||||| ||||||||| |||||||||| |||||||    
T  38300187 tgtaacgccctattttattatttatttattttattgagtttagtgtctttttgtataatttatttgaataattgtgatgtgt 38300106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 173 - 254
Target Start/End: Original strand, 42565116 - 42565197
Alignment:
Q  173 tgtaacgccctaatttattatttagttattttatcgagtttagtgtcattttgaataatttatgtgaataattgcgatgtgt 254  Q
    |||||||| ||| ||||||||||| |||||||||||||||||||||| ||||| ||||||||| |||||||||| |||||||    
T  42565116 tgtaacgcactattttattatttatttattttatcgagtttagtgtctttttgtataatttatttgaataattgtgatgtgt 42565197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 16 - 114
Target Start/End: Complemental strand, 49152150 - 49152052
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcc 114  Q
    |||||| || |||||||||||||||| |||||||||||| |||||| | |||||||||||||| | |||| ||||||| || |||| ||||||||||||    
T  49152150 gagaggtaaagagatacctcttgtgagagtcgtttggggtggagcgactggtgaaagtttgacttgggagctggagagtaaaatgcgggagtcgtatcc 49152052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 17 - 117
Target Start/End: Original strand, 12207198 - 12207298
Alignment:
Q  17 agaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatccag 116  Q
    |||||||||||||||||||| || ||||| ||||||||||||||  | |||||||||||||| | |||| || |||| |||||| ||||||| |||||||    
T  12207198 agaggcaaggagatacctctagtaaaagttgtttggggaggagcatctggtgaaagtttgacatgggagctgcagagtaagatgttggagtcttatccag 12207297  T
Q  117 a 117  Q
    |    
T  12207298 a 12207298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 111
Target Start/End: Complemental strand, 12455555 - 12455460
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgta 111  Q
    |||||| || |||||||||||||||| |||||||||||| |||||| | |||||||||||||| | |||| ||||||  ||||||| |||||||||    
T  12455555 gagaggtaaagagatacctcttgtgagagtcgtttggggtggagcgactggtgaaagtttgacttgggagatggagaataagatgcgggagtcgta 12455460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 16 - 117
Target Start/End: Complemental strand, 6413363 - 6413262
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    |||||||||||| ||||| ||||||| |||||||||||  |||||| | |||||||||||||| | |||| ||||||| ||||||| ||| || ||||||    
T  6413363 gagaggcaaggaaataccccttgtgagagtcgtttgggacggagcgactggtgaaagtttgacttgggagctggagagtaagatgcgggattcttatcca 6413264  T
Q  116 ga 117  Q
    ||    
T  6413263 ga 6413262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 174 - 246
Target Start/End: Original strand, 33555730 - 33555802
Alignment:
Q  174 gtaacgccctaatttattatttagttattttatcgagtttagtgtcattttgaataatttatgtgaataattg 246  Q
    ||||||||||| ||||||||||| |||||||||||||||||||||| |||   ||||||||| ||||||||||    
T  33555730 gtaacgccctattttattatttatttattttatcgagtttagtgtcttttaatataatttatttgaataattg 33555802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 17 - 114
Target Start/End: Complemental strand, 19147062 - 19146965
Alignment:
Q  17 agaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcc 114  Q
    ||||||||||| |||||||| ||||| || |||||||| ||||   |||||||||||||||| | |||| ||||||| ||||||| |||||| |||||    
T  19147062 agaggcaaggatatacctctagtgaaggttgtttggggtggagtaaccggtgaaagtttgacttgggagctggagagtaagatgcgggagtcttatcc 19146965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 17 - 114
Target Start/End: Complemental strand, 20746461 - 20746364
Alignment:
Q  17 agaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcc 114  Q
    ||||||||||| |||||||| ||||| || |||||||| ||||   |||||||||||||||| | |||| ||||||| ||||||| |||||| |||||    
T  20746461 agaggcaaggatatacctctagtgaaggttgtttggggtggagtaaccggtgaaagtttgacttgggagctggagagtaagatgcgggagtcttatcc 20746364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 16 - 184
Target Start/End: Original strand, 16072695 - 16072862
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    |||||||||||| |||||||| ||||| || |||||||| ||||   | |||||||||||||| | |||| ||||||| ||||||| ||| || ||||||    
T  16072695 gagaggcaaggatatacctctagtgaaggttgtttggggtggagtaactggtgaaagtttgacttgggagctggagagtaagatgcgggaatcttatcca 16072794  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgcccta 184  Q
    || || |||   |||| ||   ||||||||||| ||||  |||||||  |||||| |||||||||||||    
T  16072795 gagttgtttgcttgaggtaatatttcgaggacg-aaattctctaagtttgggagagttgtaacgcccta 16072862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 111
Target Start/End: Original strand, 1804 - 1899
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgta 111  Q
    |||||||||||| |||||||| |||||||| |||||||| ||||   | ||||| |||||||| | |||| ||||||| ||||||| |||||||||    
T  1804 gagaggcaaggacatacctctagtgaaagttgtttggggtggagtaactggtgagagtttgacttgggagctggagagtaagatgcgggagtcgta 1899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 117
Target Start/End: Original strand, 16950868 - 16950969
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    |||||||||||| |||||||| |||||||| |||||||| ||||   | ||||||||||| || | |||| ||||||| ||||| | ||||||||| |||    
T  16950868 gagaggcaaggacatacctctagtgaaagttgtttggggtggagtaactggtgaaagtttcacttgggagctggagagtaagatacgggagtcgtaccca 16950967  T
Q  116 ga 117  Q
    ||    
T  16950968 ga 16950969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 117
Target Start/End: Original strand, 26288433 - 26288534
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    |||||||||||| |||||||| |||||||| |||||||| ||||   | ||||| |||||||| | |||| ||||||| ||||||  ||||||||| |||    
T  26288433 gagaggcaaggacatacctctagtgaaagttgtttggggtggagtaactggtgagagtttgacttgggagctggagagtaagatgtgggagtcgtaccca 26288532  T
Q  116 ga 117  Q
    ||    
T  26288533 ga 26288534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 17 - 113
Target Start/End: Original strand, 14264642 - 14264738
Alignment:
Q  17 agaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatc 113  Q
    ||||||||||| |||||||| ||||| || ||||||||| | |   |||||||||||||||| | |||| ||||||| ||||||| |||||| ||||    
T  14264642 agaggcaaggatatacctctagtgaaggttgtttggggaagtgtaaccggtgaaagtttgacttgggagctggagagtaagatgcgggagtcttatc 14264738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 114
Target Start/End: Complemental strand, 14129721 - 14129627
Alignment:
Q  20 ggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcc 114  Q
    |||||||| ||||| ||||||| |||| ||||||| |||||| | |||||||||||||| | |||| |||| || ||||||| ||| || |||||    
T  14129721 ggcaaggaaataccccttgtgagagtcatttggggtggagcgactggtgaaagtttgacttgggagctggaaagtaagatgcgggattcatatcc 14129627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 114
Target Start/End: Complemental strand, 14433539 - 14433445
Alignment:
Q  20 ggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcc 114  Q
    |||||||| ||||| ||||||| |||| ||||||| |||||| | |||||||||||||| | |||| |||| || ||||||| ||| || |||||    
T  14433539 ggcaaggaaataccccttgtgagagtcatttggggtggagcgactggtgaaagtttgacttgggagctggaaagtaagatgcgggattcatatcc 14433445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 114
Target Start/End: Complemental strand, 15340344 - 15340250
Alignment:
Q  20 ggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcc 114  Q
    |||||||| ||||| ||||||| ||||||||||| ||||||| | |||||||| ||||| | |||| |||| || ||||||| ||| || |||||    
T  15340344 ggcaaggaaataccccttgtgagagtcgtttgggaaggagcgactggtgaaagcttgacttgggagctggaaagtaagatgcgggattcatatcc 15340250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 170 - 215
Target Start/End: Complemental strand, 17000214 - 17000169
Alignment:
Q  170 aattgtaacgccctaatttattatttagttattttatcgagtttag 215  Q
    ||||||||||||||| ||||||||||| ||||||||| ||||||||    
T  17000214 aattgtaacgccctattttattatttatttattttattgagtttag 17000169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 215
Target Start/End: Complemental strand, 3288348 - 3288306
Alignment:
Q  173 tgtaacgccctaatttattatttagttattttatcgagtttag 215  Q
    |||||||||||| ||||||||||| ||||||||| ||||||||    
T  3288348 tgtaacgccctattttattatttatttattttattgagtttag 3288306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 224
Target Start/End: Original strand, 13314727 - 13314777
Alignment:
Q  174 gtaacgccctaatttattatttagttattttatcgagtttagtgtcatttt 224  Q
    ||||||||||| ||||||||||| ||||||||| |||||||| ||| ||||    
T  13314727 gtaacgccctattttattatttatttattttattgagtttagagtcttttt 13314777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 215
Target Start/End: Original strand, 14179830 - 14179872
Alignment:
Q  173 tgtaacgccctaatttattatttagttattttatcgagtttag 215  Q
    |||||||||||| ||||||||||| ||||||||| ||||||||    
T  14179830 tgtaacgccctattttattatttatttattttattgagtttag 14179872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 215
Target Start/End: Original strand, 15118629 - 15118671
Alignment:
Q  173 tgtaacgccctaatttattatttagttattttatcgagtttag 215  Q
    |||||||||||| ||||||||||| ||||||||| ||||||||    
T  15118629 tgtaacgccctattttattatttatttattttattgagtttag 15118671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 215
Target Start/End: Original strand, 20251699 - 20251741
Alignment:
Q  173 tgtaacgccctaatttattatttagttattttatcgagtttag 215  Q
    |||||||||||| ||||||||||| ||||||||| ||||||||    
T  20251699 tgtaacgccctattttattatttatttattttattgagtttag 20251741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 136 - 204
Target Start/End: Original strand, 1493576 - 1493642
Alignment:
Q  136 attttcgaggacgaaaatattctaagtgggggagaattgtaacgccctaatttattatttagttatttt 204  Q
    ||||||||||||||||||  | ||||| ||||||| ||||||||||| ||||  ||||||| |||||||    
T  1493576 attttcgaggacgaaaattctttaagttggggagagttgtaacgccccaatt--ttatttaattatttt 1493642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 171 - 224
Target Start/End: Complemental strand, 9256054 - 9256001
Alignment:
Q  171 attgtaacgccctaatttattatttagttattttatcgagtttagtgtcatttt 224  Q
    |||||||| ||||| ||||||||||| ||||||||| |||||||| ||| ||||    
T  9256054 attgtaacaccctattttattatttatttattttattgagtttagagtcttttt 9256001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 171 - 224
Target Start/End: Original strand, 9314196 - 9314249
Alignment:
Q  171 attgtaacgccctaatttattatttagttattttatcgagtttagtgtcatttt 224  Q
    |||||||| ||||| ||||||||||| ||||||||| |||||||| ||| ||||    
T  9314196 attgtaacaccctattttattatttatttattttattgagtttagagtcttttt 9314249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 138 - 215
Target Start/End: Complemental strand, 11085947 - 11085871
Alignment:
Q  138 tttcgaggacgaaaatattctaagtgggggagaattgtaacgccctaatttattatttagttattttatcgagtttag 215  Q
    |||||||||||||| | || |||| |||| ||| ||||||||||||  || |||||||| ||||||||| ||||||||    
T  11085947 tttcgaggacgaaattcttttaag-ggggtagagttgtaacgccctctttaattatttaattattttatggagtttag 11085871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 38 - 111
Target Start/End: Complemental strand, 13021186 - 13021113
Alignment:
Q  38 gtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgta 111  Q
    |||| |||||||||||  |||||| |  ||||||||||||| | |||| ||||||| ||||||| |||||||||    
T  13021186 gtgagagtcgtttgggatggagcgactagtgaaagtttgacttgggagctggagagtaagatgcgggagtcgta 13021113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 20 - 101
Target Start/End: Original strand, 14286777 - 14286858
Alignment:
Q  20 ggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgc 101  Q
    |||||||| ||||| ||||||| |||||||||||  |||||| | |||||||| ||||| | |||| |||| || |||||||    
T  14286777 ggcaaggaaataccccttgtgagagtcgtttgggacggagcgactggtgaaagcttgacttgggagctggaaagtaagatgc 14286858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 136 - 204
Target Start/End: Original strand, 16928891 - 16928957
Alignment:
Q  136 attttcgaggacgaaaatattctaagtgggggagaattgtaacgccctaatttattatttagttatttt 204  Q
    ||||||||||||||||||  | ||||| ||||||| ||||||||||| ||||  ||||||| |||||||    
T  16928891 attttcgaggacgaaaattctttaagttggggagagttgtaacgccccaatt--ttatttaattatttt 16928957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 170 - 215
Target Start/End: Original strand, 18073755 - 18073800
Alignment:
Q  170 aattgtaacgccctaatttattatttagttattttatcgagtttag 215  Q
    ||||||||| ||||| ||||||||||| ||||||||| ||||||||    
T  18073755 aattgtaacaccctattttattatttatttattttattgagtttag 18073800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 138 - 215
Target Start/End: Complemental strand, 23556792 - 23556715
Alignment:
Q  138 tttcgaggacgaaaatattctaagtgggggagaattgtaacgccctaatttattatttagttattttatcgagtttag 215  Q
    |||||||||||||| | || |||| |||| ||| |||| |||||||| || |||||||  ||||||||| ||||||||    
T  23556792 tttcgaggacgaaattcttttaaggggggtagagttgtgacgccctatttaattatttgattattttattgagtttag 23556715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 173 - 214
Target Start/End: Original strand, 46385461 - 46385502
Alignment:
Q  173 tgtaacgccctaatttattatttagttattttatcgagttta 214  Q
    |||||||||||| ||||||||||| ||||||||| |||||||    
T  46385461 tgtaacgccctattttattatttatttattttattgagttta 46385502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 136 - 188
Target Start/End: Complemental strand, 15114280 - 15114228
Alignment:
Q  136 attttcgaggacgaaaatattctaagtgggggagaattgtaacgccctaattt 188  Q
    ||||||||||||||||||  | ||||| ||||||| ||||||||||| |||||    
T  15114280 attttcgaggacgaaaattctttaagttggggagagttgtaacgccccaattt 15114228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 173 - 246
Target Start/End: Original strand, 36300268 - 36300337
Alignment:
Q  173 tgtaacgccctaatttattatttagttattttatcgagtttagtgtcattttgaataatttatgtgaataattg 246  Q
    |||||||||||| |||||||||||    ||||||||||||||||| | |||   ||||||||| ||||||||||    
T  36300268 tgtaacgccctattttattattta----ttttatcgagtttagtgccttttaatataatttatttgaataattg 36300337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 156; Significance: 6e-83; HSPs: 61)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 156; E-Value: 6e-83
Query Start/End: Original strand, 19 - 254
Target Start/End: Complemental strand, 21404627 - 21404392
Alignment:
Q  19 aggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatccagat 118  Q
    ||||||||||||||||||||||||||||||||||| ||||||||| | |||||||||||||| |||||||||||| ||||||||||||||||||| |||     
T  21404627 aggcaaggagatacctcttgtgaaagtcgtttgggaaggagcggctgatgaaagtttgacgtgggagttggagagtaagatgctggagtcgtatctagag 21404528  T
Q  119 ttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccctaatttattatttagttattttatcgagtttagtgt 218  Q
    |||||| || ||| ||||||||| |||||||||||||||||||||||||||| ||||||||||||| ||||||||||| |||||||||| ||||||||||    
T  21404527 ttatttgaaagaggtacattttcaaggacgaaaatattctaagtgggggagagttgtaacgccctattttattatttatttattttatcaagtttagtgt 21404428  T
Q  219 cattttgaataatttatgtgaataattgcgatgtgt 254  Q
    | ||| | |||||||||||||||||||  |||||||    
T  21404427 cttttggcataatttatgtgaataattatgatgtgt 21404392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 16 - 206
Target Start/End: Original strand, 20468686 - 20468876
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    ||||||||||||||||||||||||||| |||||||||| ||||||| | ||||||||||| |||| ||||||||| || |||||||||||||| | ||||    
T  20468686 gagaggcaaggagatacctcttgtgaaggtcgtttgggaaggagcgactggtgaaagtttaacgtgggagttggaaagtaagatgctggagtcttttcca 20468785  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccctaatttattatttagttattttat 206  Q
    || || |||  ||||| |||||||||||||||||||||  | ||||| ||| |||| ||||||||||||||  |||||||  |||||||||    
T  20468786 gagttgtttacatgaggtacattttcgaggacgaaaattctgtaagttgggcagaaatgtaacgccctaatgaattatttgattattttat 20468876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 23 - 215
Target Start/End: Original strand, 26739304 - 26739497
Alignment:
Q  23 aaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatccagatttat 122  Q
    ||||| |||||||||||||||||||||||||  |||||| | |||||||| || |||| |||||||||||| |||||||||||||| |||||||| || |    
T  26739304 aaggaaatacctcttgtgaaagtcgtttgggacggagcgactggtgaaagcttaacgtgggagttggagagtaagatgctggagtcttatccagaattgt 26739403  T
Q  123 ttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccctaatt-tattatttagttattttatcgagtttag 215  Q
    ||  ||||| || ||||||||||||||||||||| ||||| ||||||| ||||||||||||  ||  |||||||| ||||||| | ||||||||    
T  26739404 ttgcatgaggtaaattttcgaggacgaaaatattataagttggggagacttgtaacgccctctttgaattatttaattattttgttgagtttag 26739497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 16 - 215
Target Start/End: Original strand, 21343950 - 21344149
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    ||||||||| ||||||||||||||||||||||||||||  ||||||   ||||||||  | |||| ||||||||| || |||||||||||||| ||||||    
T  21343950 gagaggcaaagagatacctcttgtgaaagtcgtttgggacggagcgattggtgaaagcctaacgtgggagttggaaagtaagatgctggagtcttatcca 21344049  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccctaatttattatttagttattttatcgagtttag 215  Q
    || || |||   |||| || |||||||||||||||||| || ||||| ||||||| ||||||||||||  || |||||||| ||||||| | ||||||||    
T  21344050 gagttgtttgcttgaggtaaattttcgaggacgaaaatcttataagttggggagagttgtaacgccctctttgattatttaattattttgttgagtttag 21344149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 16 - 182
Target Start/End: Original strand, 22333479 - 22333645
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    ||||||||||||||||||||| |||| ||||||||||   |||||| | |||||||| ||||||| |||| | ||||| |||||||||||||| ||||||    
T  22333479 gagaggcaaggagatacctctcgtgagagtcgtttggacgggagcgactggtgaaagcttgacgtgggagcttgagagtaagatgctggagtcttatcca 22333578  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccc 182  Q
    || || |||   |||| || |||||||||||||||||| || ||||||||||||| |||||||||||    
T  22333579 gagttgtttgcttgaggtaaattttcgaggacgaaaatcttttaagtgggggagagttgtaacgccc 22333645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 16 - 182
Target Start/End: Original strand, 27669082 - 27669248
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    ||||||||||||||||||||| |||| ||||||||||   |||||| | |||||||| ||||||| |||| | ||||| |||||||||||||| ||||||    
T  27669082 gagaggcaaggagatacctctcgtgagagtcgtttggtcgggagcgactggtgaaagcttgacgtgggagcttgagagtaagatgctggagtcttatcca 27669181  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccc 182  Q
    || || |||   |||| || |||||||||||||||||| || ||||||||||||| |||||||||||    
T  27669182 gagttttttacttgaggtaaattttcgaggacgaaaatcttttaagtgggggagagttgtaacgccc 27669248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 16 - 182
Target Start/End: Complemental strand, 41770636 - 41770470
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    ||||||||||||||||||||| |||| ||||||||||   |||||| | |||||||| ||||||| |||| | ||||| |||||||||||||| ||||||    
T  41770636 gagaggcaaggagatacctctcgtgagagtcgtttggtcgggagcgactggtgaaagcttgacgtgggagcttgagagtaagatgctggagtcttatcca 41770537  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccc 182  Q
    || || |||   |||| || |||||||||||||||||| || ||||||||||||| |||||||||||    
T  41770536 gagttgtttacttgaggtaaattttcgaggacgaaaatcttttaagtgggggagagttgtaacgccc 41770470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 16 - 204
Target Start/End: Original strand, 21662631 - 21662818
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    |||||||||||||||| |||| |||||||| |||||||||||||   | ||||| |||||||||| |||||||||||| |||||| ||||||| ||||||    
T  21662631 gagaggcaaggagatatctctagtgaaagttgtttggggaggagaaactggtgagagtttgacgtgggagttggagagtaagatgttggagtcttatcca 21662730  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccctaatttattatttagttatttt 204  Q
    || || ||| | |||| ||  |||||||||||||||||  | ||||| ||||||| |||||| ||||||| || ||||||| |||||||    
T  21662731 gagttgtttgattgaggtatgttttcgaggacgaaaattctttaagttggggagagttgtaatgccctaa-ttcttatttaattatttt 21662818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 16 - 215
Target Start/End: Complemental strand, 22344900 - 22344701
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    |||||||||||||||||||||  ||| ||||||||||   |||||||| |||||||| ||||||| |||| | ||||| || ||||||||||| ||||||    
T  22344900 gagaggcaaggagatacctctcatgagagtcgtttggacgggagcggctggtgaaagcttgacgtgggagcttgagagtaaaatgctggagtcttatcca 22344801  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccctaatttattatttagttattttatcgagtttag 215  Q
    || || |||   |||| || |||||||||||||||||| || ||||||||||||| |||||||||||   ||| ||| ||  |||||| |||||||||||    
T  22344800 gagttgtttgcttgaggtaaattttcgaggacgaaaatcttttaagtgggggagagttgtaacgcccacttttgttaattgtttatttaatcgagtttag 22344701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 16 - 182
Target Start/End: Original strand, 15000331 - 15000497
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    ||||||||||||||||||||| |||| ||||||||||   ||| || | |||||||| ||||||| |||| | ||||| |||||||||||||| ||||||    
T  15000331 gagaggcaaggagatacctctcgtgagagtcgtttggacgggaacgactggtgaaagcttgacgtgggagcttgagagtaagatgctggagtcttatcca 15000430  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccc 182  Q
    || || |||   |||| || |||||||||||||||||| || ||||||||||||| |||||||||||    
T  15000431 gagttgtttgcttgaggtaaattttcgaggacgaaaatcttttaagtgggggagagttgtaacgccc 15000497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 16 - 182
Target Start/End: Complemental strand, 16356296 - 16356130
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    ||||||||||||||||||||| |||| ||||||||||   |||||| | |||||||| ||||||| |||| | ||||| |||||||||||||| ||||||    
T  16356296 gagaggcaaggagatacctctcgtgagagtcgtttggtcgggagcgactggtgaaagcttgacgtgggagcttgagagtaagatgctggagtcttatcca 16356197  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccc 182  Q
    || || |||   |||| || ||||||||||||||||||  | ||||||||||||| |||||||||||    
T  16356196 gagttgtttgcttgaggtaaattttcgaggacgaaaatcctttaagtgggggagagttgtaacgccc 16356130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 16 - 182
Target Start/End: Complemental strand, 22134462 - 22134296
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    ||||||||||||||||||||| |||| ||||||||||   |||||| | |||||||| ||||||| |||| | ||||| |||||||||||||| ||||||    
T  22134462 gagaggcaaggagatacctctcgtgagagtcgtttggacgggagcgactggtgaaagcttgacgtgggagcttgagagtaagatgctggagtcttatcca 22134363  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccc 182  Q
    || || |||   |||| || ||||||||||| |||||| || ||||||||||||| |||||||||||    
T  22134362 gagttgtttgcttgaggtaaattttcgaggatgaaaatcttttaagtgggggagagttgtaacgccc 22134296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 16 - 182
Target Start/End: Complemental strand, 27518201 - 27518035
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    ||||||||||||||||||||| |||| ||||||||||   |||||| | |||||||| ||||||| |||| | ||||| |||||||||||||| ||||||    
T  27518201 gagaggcaaggagatacctctcgtgagagtcgtttggtcgggagcgactggtgaaagcttgacgtgggagcttgagagtaagatgctggagtcttatcca 27518102  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccc 182  Q
    || || |||   |||| || ||||||||||||||||||  | ||||||||||||| |||||||||||    
T  27518101 gagttgtttgcttgaggtaaattttcgaggacgaaaatcctttaagtgggggagagttgtaacgccc 27518035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 16 - 182
Target Start/End: Complemental strand, 27610148 - 27609982
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    ||||||||||||||||||||| |||| ||||||||||   |||||| | |||||||| ||||||| |||| | ||||| |||||||||||||| ||||||    
T  27610148 gagaggcaaggagatacctctcgtgagagtcgtttggtcgggagcgactggtgaaagcttgacgtgggagcttgagagtaagatgctggagtcttatcca 27610049  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccc 182  Q
    || || |||   | || || |||||||||||||||||| || ||||||||||||| |||||||||||    
T  27610048 gagttgtttacttaaggtaaattttcgaggacgaaaatcttttaagtgggggagagttgtaacgccc 27609982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 16 - 182
Target Start/End: Original strand, 29476665 - 29476831
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    ||||||||||||||||||| | |||| ||||||||||   |||||| | |||||||| ||||||| |||| | ||||| |||||||||||||| ||||||    
T  29476665 gagaggcaaggagatacctatcgtgagagtcgtttggacgggagcgactggtgaaagcttgacgtgggagcttgagagtaagatgctggagtcttatcca 29476764  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccc 182  Q
    || || |||   |||| || |||||||||||||||||| || ||||||||||||| |||||||||||    
T  29476765 gagttgtttgcttgaggtaaattttcgaggacgaaaatcttttaagtgggggagagttgtaacgccc 29476831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 16 - 182
Target Start/End: Complemental strand, 34566288 - 34566122
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    ||||||||||||||||||||| |||| ||||||||||   |||||| | |||||||| ||||||| |||| | ||||| |||||||||||||| ||||||    
T  34566288 gagaggcaaggagatacctctcgtgagagtcgtttggtcgggagcgactggtgaaagcttgacgtgggagcttgagagtaagatgctggagtcttatcca 34566189  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccc 182  Q
    || || |||   |||| || ||||||||||||||||||  | ||||||||||||| |||||||||||    
T  34566188 gagttgtttgcttgaggtaaattttcgaggacgaaaatcctttaagtgggggagagttgtaacgccc 34566122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 16 - 182
Target Start/End: Complemental strand, 40708574 - 40708408
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    ||||||||||||||||||||| |||| ||||||||||   |||||| | |||||||| ||||||| |||| | ||||| |||||||||||||| ||||||    
T  40708574 gagaggcaaggagatacctctcgtgagagtcgtttggtcgggagcgactggtgaaagcttgacgtgggagcttgagagtaagatgctggagtcttatcca 40708475  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccc 182  Q
    || || |||   |||| || ||||||||||||||||||  | ||||||||||||| |||||||||||    
T  40708474 gagttgtttgcttgaggtaaattttcgaggacgaaaatcctttaagtgggggagagttgtaacgccc 40708408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 16 - 182
Target Start/End: Complemental strand, 19769754 - 19769588
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    ||||||||||||||||||||| |||| ||||||||||   |||||| | |||||||| ||||||| |||| |  |||| |||||| ||||||| ||||||    
T  19769754 gagaggcaaggagatacctctcgtgagagtcgtttggtcgggagcgactggtgaaagcttgacgtgggagcttaagagtaagatgatggagtcttatcca 19769655  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccc 182  Q
    || || |||   |||| || |||||||||||||||||| || ||||||||||||| |||||||||||    
T  19769654 gagttgtttacttgaggtaaattttcgaggacgaaaatcttttaagtgggggagagttgtaacgccc 19769588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 16 - 182
Target Start/End: Original strand, 27685992 - 27686157
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    ||||||||||||||||||||| |||| ||||||||||   |||||| | |||||||| ||||||| |||| | ||||| |||||||||||||| ||||||    
T  27685992 gagaggcaaggagatacctctcgtgagagtcgtttggacgggagcgactggtgaaagcttgacgtgggagcttgagagtaagatgctggagtcttatcca 27686091  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccc 182  Q
    || || |||   |||| || |||||||||||||||||| || |||| |||||||| |||||||||||    
T  27686092 gagttgtttgcttgaggta-attttcgaggacgaaaatcttttaagagggggagagttgtaacgccc 27686157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 16 - 117
Target Start/End: Original strand, 21564544 - 21564645
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    ||||||||||||||||||||| || ||||||||||||||||||||||| |||||||||||||| | |||  ||||||| |||||||||||||| ||||||    
T  21564544 gagaggcaaggagatacctctagtaaaagtcgtttggggaggagcggctggtgaaagtttgacatgggaactggagagtaagatgctggagtcttatcca 21564643  T
Q  116 ga 117  Q
    ||    
T  21564644 ga 21564645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 16 - 184
Target Start/End: Original strand, 21984897 - 21985065
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    ||||||||||||||||| |||||||| |||||||||||  |||||| | |||||||| || |||| |||| | ||||| ||||||||||| || |||| |    
T  21984897 gagaggcaaggagatacttcttgtgagagtcgtttgggacggagcgactggtgaaagcttaacgtgggagctagagagtaagatgctggaatcttatcta 21984996  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgcccta 184  Q
    || || |||   |||| || |||||||||||||||||| || ||||| ||||||| |||||||||||||    
T  21984997 gagttgtttgcttgaggtaaattttcgaggacgaaaatcttataagttggggagagttgtaacgcccta 21985065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 15 - 175
Target Start/End: Complemental strand, 23471024 - 23470864
Alignment:
Q  15 agagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcc 114  Q
    |||||||||| || |||||||||||||||||||||||||  |||||||| |||||||| || |||| |||||||||||| ||||||||||| || |||||    
T  23471024 agagaggcaaagacatacctcttgtgaaagtcgtttgggacggagcggctggtgaaagcttaacgtgggagttggagagtaagatgctggaatcttatcc 23470925  T
Q  115 agatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgt 175  Q
    ||| || |||  | ||| || ||||| ||||||||||||  | ||||| ||||||| ||||    
T  23470924 agagttgtttgcacgaggtaaatttttgaggacgaaaatcctataagttggggagagttgt 23470864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 16 - 182
Target Start/End: Complemental strand, 23573536 - 23573370
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    |||||||||||||||||| ||||||| |||||||||| | |||||| | |||||||| ||||||| |||| | | ||| |||||||| ||||| |||| |    
T  23573536 gagaggcaaggagataccccttgtgagagtcgtttggagcggagcgactggtgaaagcttgacgtgggagcttgggagtaagatgctagagtcttatcta 23573437  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccc 182  Q
    || || |||   |||| || |||||||||||||||||| || ||||| ||||||| |||||||||||    
T  23573436 gagttgtttgcttgaggtaaattttcgaggacgaaaatcttataagttggggagagttgtaacgccc 23573370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 16 - 182
Target Start/End: Original strand, 37292088 - 37292254
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    |||||||||||||||||||||||||| ||||||||||   |||||| | |||||||| ||||||| |||| | || || ||||||||||||||  |||||    
T  37292088 gagaggcaaggagatacctcttgtgagagtcgtttggacgggagcgactggtgaaagcttgacgtgggagcttgaaagtaagatgctggagtctcatcca 37292187  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccc 182  Q
    || || |||   |||| || |||||||||||||||||| |  |||||| |||||| |||||||||||    
T  37292188 gagttgtttgcttgaggtaaattttcgaggacgaaaatctcttaagtgagggagagttgtaacgccc 37292254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 16 - 184
Target Start/End: Original strand, 24736203 - 24736370
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    |||||| || |||||||||||||||| ||| |||||||| |||||| | |||||||||||||| | |||| ||||||| ||||||| |||||||||||||    
T  24736203 gagaggtaaagagatacctcttgtgagagttgtttggggtggagcgactggtgaaagtttgacttgggagctggagagtaagatgcaggagtcgtatcca 24736302  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgcccta 184  Q
    || || |||   |||| ||   ||||||||||| ||||  ||||||| ||||||| |||||||||||||    
T  24736303 gagttgtttacttgaggtaatatttcgaggacg-aaattctctaagttggggagagttgtaacgcccta 24736370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 16 - 184
Target Start/End: Original strand, 24737377 - 24737544
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    |||||| || |||||||||||||||| ||| |||||||| |||||| | |||||||||||||| | |||| ||||||| ||||||| |||||||||||||    
T  24737377 gagaggtaaagagatacctcttgtgagagttgtttggggtggagcgactggtgaaagtttgacttgggagctggagagtaagatgcaggagtcgtatcca 24737476  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgcccta 184  Q
    || || |||   |||| ||   ||||||||||| ||||  ||||||| ||||||| |||||||||||||    
T  24737477 gagttgtttacttgaggtaatatttcgaggacg-aaattctctaagttggggagagttgtaacgcccta 24737544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 16 - 184
Target Start/End: Original strand, 24750146 - 24750313
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    |||||| || |||||||||||||||| ||| |||||||| |||||| | |||||||||||||| | |||| ||||||| ||||||| |||||||||||||    
T  24750146 gagaggtaaagagatacctcttgtgagagttgtttggggtggagcgactggtgaaagtttgacttgggagctggagagtaagatgcaggagtcgtatcca 24750245  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgcccta 184  Q
    || || |||   |||| ||   ||||||||||| ||||  ||||||| ||||||| |||||||||||||    
T  24750246 gagttgtttacttgaggtaatatttcgaggacg-aaattctctaagttggggagagttgtaacgcccta 24750313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 16 - 178
Target Start/End: Complemental strand, 26682034 - 26681872
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    |||||||||||| ||||| ||||| | |||||||||||   ||||| | |||||||| ||||||| |||| | ||||| |||||||||||||| ||||||    
T  26682034 gagaggcaaggaaataccccttgttagagtcgtttgggctagagcgactggtgaaagcttgacgtgggagcttgagagtaagatgctggagtcttatcca 26681935  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaac 178  Q
    || || |||   ||||||| ||||||||||||||| || || ||||| ||||||| |||||||    
T  26681934 gagttgtttgcttgagataaattttcgaggacgaatatcttttaagttggggagagttgtaac 26681872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 16 - 178
Target Start/End: Complemental strand, 26953641 - 26953479
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    |||||||||||| ||||| ||||| | |||||||||||   ||||| | |||||||| ||||||| |||| | ||||| |||||||||||||| ||||||    
T  26953641 gagaggcaaggaaataccccttgttagagtcgtttgggctagagcgactggtgaaagcttgacgtgggagcttgagagtaagatgctggagtcttatcca 26953542  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaac 178  Q
    || || |||   ||||||| ||||||||||||||| || || ||||| ||||||| |||||||    
T  26953541 gagttgtttgcttgagataaattttcgaggacgaatatcttttaagttggggagagttgtaac 26953479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 16 - 184
Target Start/End: Complemental strand, 21625312 - 21625145
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    |||||||||||| |||||||| ||||| || |||||||||||||   | |||||||||||||||| |||| ||||||| ||||||| |||||| ||||||    
T  21625312 gagaggcaaggatatacctctagtgaaggttgtttggggaggagtaactggtgaaagtttgacgtgggagctggagagtaagatgcgggagtcttatcca 21625213  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgcccta 184  Q
    || || |||   |||| ||   ||||||||||| ||||  ||||||| ||||||| |||||||||||||    
T  21625212 gagttgtttgcttgaggtaatatttcgaggacg-aaattctctaagttggggagagttgtaacgcccta 21625145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 16 - 114
Target Start/End: Complemental strand, 22502455 - 22502357
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcc 114  Q
    |||||| ||| ||||||||||||||| |||||||| ||| |||||||| |||||||||||||| | |||| ||||||| ||||||| ||||||||||||    
T  22502455 gagaggtaagaagatacctcttgtgagagtcgttttgggtggagcggctggtgaaagtttgacttgggagctggagagtaagatgcgggagtcgtatcc 22502357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 26 - 114
Target Start/End: Original strand, 14887596 - 14887684
Alignment:
Q  26 gagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcc 114  Q
    |||||||||||||||| |||||||||||| |||||| | |||||||||||||| | |||| ||||||| ||||||| ||||||||||||    
T  14887596 gagatacctcttgtgagagtcgtttggggtggagcgactggtgaaagtttgacttgggagctggagagtaagatgcgggagtcgtatcc 14887684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 22 - 182
Target Start/End: Complemental strand, 18775565 - 18775405
Alignment:
Q  22 caaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatccagattta 121  Q
    |||||| ||||| ||||| | | |||||||||  |||||| | | |||||| ||||||| |||| | ||||| |||||||||||||| |||||||| ||     
T  18775565 caaggaaataccccttgtcagaatcgtttgggctggagcgactgatgaaagcttgacgtgggagcttgagagtaagatgctggagtcttatccagagttg 18775466  T
Q  122 tttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccc 182  Q
    |||   |||| || |||||||| ||||||||| || ||||||||||||| |||||||||||    
T  18775465 tttgcttgaggtaaattttcgaagacgaaaatcttttaagtgggggagagttgtaacgccc 18775405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 16 - 215
Target Start/End: Complemental strand, 20573315 - 20573117
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    |||||| || || |||||||||||||||||||| ||||  |||||| | |||||||| || || | |||| | ||||| | |||||||||||| ||||||    
T  20573315 gagaggtaaagatatacctcttgtgaaagtcgtctgggacggagcgactggtgaaagcttaacatgggagctagagagtacgatgctggagtcttatcca 20573216  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccctaatttattatttagttattttatcgagtttag 215  Q
    || || |||   |||| || |||||||||||||||||| || ||||| ||||||| ||||||| ||||  || ||||| || ||||||| | ||||||||    
T  20573215 gagttgtttgcttgaggtaaattttcgaggacgaaaatcttataagttggggagagttgtaac-ccctctttgattatataattattttgttgagtttag 20573117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 16 - 111
Target Start/End: Original strand, 23080681 - 23080776
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgta 111  Q
    |||||||||||||||||||||| ||| |||||||||||  |||||| | |||||||||||||| | |||| ||||||| ||||||| |||||||||    
T  23080681 gagaggcaaggagatacctcttctgagagtcgtttgggatggagcgactggtgaaagtttgacttgggagctggagagtaagatgcgggagtcgta 23080776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 17 - 184
Target Start/End: Original strand, 23442886 - 23443052
Alignment:
Q  17 agaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatccag 116  Q
    ||||| ||||| |||||||| ||||| || |||||||| ||||   |||||||||||||||| |||||| ||||||| ||||||| |||||| |||||||    
T  23442886 agaggtaaggatatacctctagtgaaggttgtttggggtggagtaaccggtgaaagtttgacttaggagctggagagtaagatgcgggagtcttatccag 23442985  T
Q  117 atttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgcccta 184  Q
    | ||||||   || | ||   ||||||||||| ||||  ||||||| ||||||| |||||||||||||    
T  23442986 agttatttgcttgtggtaatatttcgaggacg-aaattctctaagttggggagagttgtaacgcccta 23443052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 176 - 254
Target Start/End: Original strand, 19227362 - 19227440
Alignment:
Q  176 aacgccctaatttattatttagttattttatcgagtttagtgtcattttgaataatttatgtgaataattgcgatgtgt 254  Q
    ||||||||| ||||||||||| ||||||||||||||||||| || ||||| ||||||||| |||||||||| |||||||    
T  19227362 aacgccctattttattatttatttattttatcgagtttagtttctttttgtataatttatttgaataattgtgatgtgt 19227440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 16 - 114
Target Start/End: Complemental strand, 20342055 - 20341957
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcc 114  Q
    |||||| || |||||||||||||||| |||||||||||| |||||| | |||||||||||||| | |||  ||||||| ||||||| ||||||||||||    
T  20342055 gagaggtaaagagatacctcttgtgagagtcgtttggggtggagcgactggtgaaagtttgacttgggaactggagagtaagatgcgggagtcgtatcc 20341957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 16 - 114
Target Start/End: Original strand, 37546092 - 37546190
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcc 114  Q
    |||||| || || ||||||||||||| |||||||||||| |||||| | |||||||||||||| | |||| ||||||| ||||||| ||||||||||||    
T  37546092 gagaggtaaagaaatacctcttgtgagagtcgtttggggtggagcgactggtgaaagtttgacttgggagctggagagtaagatgcgggagtcgtatcc 37546190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 16 - 184
Target Start/End: Original strand, 6403140 - 6403307
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    |||||||||||| |||||||| ||||| || |||||||| ||||   ||||||| |||||||| | |||| ||||||| ||||||| ||||||||||||     
T  6403140 gagaggcaaggatatacctctagtgaaggttgtttggggtggagtaaccggtgagagtttgacttgggagctggagagtaagatgcgggagtcgtatccg 6403239  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgcccta 184  Q
    || || |||   |||| ||   ||||||||||| ||||  ||||||| ||||||| |||||||||||||    
T  6403240 gagttgtttgtttgaggtaagatttcgaggacg-aaattctctaagttggggagagttgtaacgcccta 6403307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 26 - 206
Target Start/End: Original strand, 24799002 - 24799181
Alignment:
Q  26 gagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatccagatttatttc 125  Q
    ||||| |||||||| | |||||||||||| |||||| | |||||||||||||| | |||| ||||||| ||||||| |||||||||||| || || |||     
T  24799002 gagattcctcttgttagagtcgtttggggtggagcgactggtgaaagtttgacttgggagctggagagtaagatgcgggagtcgtatccggagttgtttg 24799101  T
Q  126 aatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccctaatttattatttagttattttat 206  Q
      |||| ||   ||||||||||| ||||  | ||| | ||||||| ||||||||||||| ||  ||||||| |||||||||    
T  24799102 tttgaggtaagatttcgaggacg-aaattctgtaatttggggagagttgtaacgccctagttatttatttaattattttat 24799181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 26 - 114
Target Start/End: Complemental strand, 25847838 - 25847750
Alignment:
Q  26 gagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcc 114  Q
    |||||||||||||||| | |||||||||| |||||| | |||||||||||||| | |||| ||||||| ||||||| ||||||||||||    
T  25847838 gagatacctcttgtgagattcgtttggggtggagcgactggtgaaagtttgacttgggagctggagagtaagatgcgggagtcgtatcc 25847750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 17 - 184
Target Start/End: Complemental strand, 21496408 - 21496242
Alignment:
Q  17 agaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatccag 116  Q
    ||||||||||| |||||||| || || || |||||||||||||   | |||||||||||||| | |||| ||||||| ||||||| |||||| ||||| |    
T  21496408 agaggcaaggatatacctctagttaaggttgtttggggaggagtaactggtgaaagtttgacttgggagctggagagtaagatgcgggagtcttatccgg 21496309  T
Q  117 atttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgcccta 184  Q
    | || |||   |||| ||   ||||||||||| ||||  ||||||| ||||||| |||||||||||||    
T  21496308 agttgtttgcttgaggtaatatttcgaggacg-aaattctctaagttggggagagttgtaacgcccta 21496242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 16 - 111
Target Start/End: Complemental strand, 22380975 - 22380880
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgta 111  Q
    |||||| || |||||||||||||||| |||||||||||| |||||| |  ||||||||||||| | |||| |||| || ||||||| |||||||||    
T  22380975 gagaggtaaagagatacctcttgtgagagtcgtttggggtggagcgactagtgaaagtttgacttgggagctggaaagtaagatgcgggagtcgta 22380880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 26 - 184
Target Start/End: Original strand, 28895544 - 28895701
Alignment:
Q  26 gagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatccagatttatttc 125  Q
    |||||||||||||| | ||| |||||||| |||||  |||||||||||||||| | |||  |||| || |||||||  || |||||||| || || |||     
T  28895544 gagatacctcttgtaagagttgtttggggtggagcaaccggtgaaagtttgacttgggaactggaaagtaagatgcaagaatcgtatcctgagttgtttg 28895643  T
Q  126 aatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgcccta 184  Q
      |||| ||   ||||||||||| ||||  ||||||| ||||||| |||||||||||||    
T  28895644 tttgaggtaagatttcgaggacg-aaattctctaagttggggagagttgtaacgcccta 28895701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 26 - 184
Target Start/End: Original strand, 28924370 - 28924527
Alignment:
Q  26 gagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatccagatttatttc 125  Q
    |||||||||||||| | ||| |||||||| |||||  |||||||||||||||| | |||  |||| || |||||||  || |||||||| || || |||     
T  28924370 gagatacctcttgtaagagttgtttggggtggagcaaccggtgaaagtttgacttgggaactggaaagtaagatgcaagaatcgtatcctgagttgtttg 28924469  T
Q  126 aatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgcccta 184  Q
      |||| ||   ||||||||||| ||||  ||||||| ||||||| |||||||||||||    
T  28924470 tttgaggtaagatttcgaggacg-aaattctctaagttggggagagttgtaacgcccta 28924527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 138 - 215
Target Start/End: Complemental strand, 16221437 - 16221360
Alignment:
Q  138 tttcgaggacgaaaatattctaagtgggggagaattgtaacgccctaatttattatttagttattttatcgagtttag 215  Q
    |||||||||| ||| | || |||| | || ||| ||||||||||||| ||||||||||| ||||||||| ||||||||    
T  16221437 tttcgaggacaaaattcttttaagggaggtagagttgtaacgccctattttattatttatttattttattgagtttag 16221360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 142 - 215
Target Start/End: Complemental strand, 16222921 - 16222849
Alignment:
Q  142 gaggacgaaaatattctaagtgggggagaattgtaacgccctaatttattatttagttattttatcgagtttag 215  Q
    |||||||||| | || |||| |||| ||| ||||||||||||| ||||||||||| ||||||||| ||||||||    
T  16222921 gaggacgaaattcttttaag-ggggtagagttgtaacgccctattttattatttatttattttattgagtttag 16222849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 138 - 211
Target Start/End: Complemental strand, 19923738 - 19923665
Alignment:
Q  138 tttcgaggacgaaaatattctaagtgggggagaattgtaacgccctaatttattatttagttattttatcgagt 211  Q
    |||||||||||||| | || |||| |||  ||| ||||||||||||| ||||||||||| ||||||||| ||||    
T  19923738 tttcgaggacgaaattcttttaagggggatagagttgtaacgccctattttattatttatttattttattgagt 19923665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 138 - 215
Target Start/End: Complemental strand, 19926465 - 19926388
Alignment:
Q  138 tttcgaggacgaaaatattctaagtgggggagaattgtaacgccctaatttattatttagttattttatcgagtttag 215  Q
    |||||||||||||| | || |||| |||  ||| ||||||||||||| ||| ||||||| ||||||||| ||||||||    
T  19926465 tttcgaggacgaaattcttttaagggggatagagttgtaacgccctattttgttatttatttattttattgagtttag 19926388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 117
Target Start/End: Original strand, 22236512 - 22236613
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    |||||||||||| |||||||| ||||| || |||||||| || |   ||||||| |||||||| | |||| | ||||| ||||||| |||||||||| ||    
T  22236512 gagaggcaaggatatacctctagtgaaggttgtttggggtggggtaaccggtgagagtttgacttgggagctagagagtaagatgcgggagtcgtattca 22236611  T
Q  116 ga 117  Q
    ||    
T  22236612 ga 22236613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 100
Target Start/End: Original strand, 17269929 - 17270009
Alignment:
Q  20 ggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatg 100  Q
    |||||||| |||||  | |||| |||||||||||| |||||| | |||||||||||||| | |||| ||||||| ||||||    
T  17269929 ggcaaggaaatacccttggtgagagtcgtttggggcggagcgactggtgaaagtttgacttgggagctggagagtaagatg 17270009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 171 - 215
Target Start/End: Complemental strand, 18745455 - 18745411
Alignment:
Q  171 attgtaacgccctaatttattatttagttattttatcgagtttag 215  Q
    |||||||||||||| ||||||||||| ||||||||| ||||||||    
T  18745455 attgtaacgccctattttattatttatttattttattgagtttag 18745411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 138 - 214
Target Start/End: Original strand, 21556566 - 21556641
Alignment:
Q  138 tttcgaggacgaaaatattctaagtgggggagaattgtaacgccctaatttattatttagttattttatcgagttta 214  Q
    |||||||||||||| | || |||| |||| ||| ||||||||||||| |||| |||||| ||||||||| |||||||    
T  21556566 tttcgaggacgaaattcttttaag-ggggtagagttgtaacgccctattttaatatttatttattttattgagttta 21556641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 66 - 182
Target Start/End: Complemental strand, 25422944 - 25422828
Alignment:
Q  66 gtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatccagatttatttcaatgagatacattttcgaggacgaaaatattctaagtggg 165  Q
    ||||||| || |||| |||| | ||||| ||||||||| | || |||||||| || |||   |||| || |||||||| ||||||||| || ||||| ||    
T  25422944 gtgaaagcttaacgtgggagctagagagtaagatgctgaaatcttatccagagttgtttgcttgaggtaaattttcgacgacgaaaatcttataagttgg 25422845  T
Q  166 ggagaattgtaacgccc 182  Q
    ||||| |||||||||||    
T  25422844 ggagagttgtaacgccc 25422828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 172 - 215
Target Start/End: Complemental strand, 16224598 - 16224555
Alignment:
Q  172 ttgtaacgccctaatttattatttagttattttatcgagtttag 215  Q
    ||||||||||||| ||||||||||| ||||||||| ||||||||    
T  16224598 ttgtaacgccctattttattatttatttattttattgagtttag 16224555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 172 - 215
Target Start/End: Original strand, 20197192 - 20197235
Alignment:
Q  172 ttgtaacgccctaatttattatttagttattttatcgagtttag 215  Q
    ||||||||||||| ||||||||||| ||||||||| ||||||||    
T  20197192 ttgtaacgccctattttattatttatttattttattgagtttag 20197235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 173 - 224
Target Start/End: Complemental strand, 22112264 - 22112213
Alignment:
Q  173 tgtaacgccctaatttattatttagttattttatcgagtttagtgtcatttt 224  Q
    |||||||||||| ||||||||||| ||||||||| |||||||| ||| ||||    
T  22112264 tgtaacgccctattttattatttatttattttattgagtttagagtcttttt 22112213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 138 - 215
Target Start/End: Complemental strand, 16641640 - 16641563
Alignment:
Q  138 tttcgaggacgaaaatattctaagtgggggagaattgtaacgccctaatttattatttagttattttatcgagtttag 215  Q
    |||||||||||||| | || ||||  ||| ||| |||||| |||||| |||| |||||| ||||||||| ||||||||    
T  16641640 tttcgaggacgaaattcttttaaggtgggtagagttgtaatgccctattttaatatttaattattttattgagtttag 16641563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 136 - 204
Target Start/End: Complemental strand, 23669636 - 23669570
Alignment:
Q  136 attttcgaggacgaaaatattctaagtgggggagaattgtaacgccctaatttattatttagttatttt 204  Q
    ||||||||||||||||||  | ||||| ||||||| ||||||||||| ||||  ||||||| |||||||    
T  23669636 attttcgaggacgaaaatcctttaagttggggagagttgtaacgcccgaatt--ttatttaattatttt 23669570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 175 - 215
Target Start/End: Original strand, 14025331 - 14025371
Alignment:
Q  175 taacgccctaatttattatttagttattttatcgagtttag 215  Q
    |||||||||| ||||||||||| ||||||||| ||||||||    
T  14025331 taacgccctattttattatttatttattttattgagtttag 14025371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0730 (Bit Score: 128; Significance: 3e-66; HSPs: 1)
Name: scaffold0730
Description:

Target: scaffold0730; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 4 - 215
Target Start/End: Original strand, 5991 - 6202
Alignment:
Q  4 agtggagaagcagagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctg 103  Q
    |||| |||||| || ||||||||||||||||||||||||||| ||||||||||||||||  || |||| |||||||| |||||||||||| |||||||||    
T  5991 agtgaagaagctgaaaggcaaggagatacctcttgtgaaagtagtttggggaggagcggttggcgaaaatttgacgtgggagttggagagtaagatgctg 6090  T
Q  104 gagtcgtatccagatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccctaatttattatttagttattt 203  Q
    ||||| |||||||| || |||  ||||| |||||||||||||||||||||||||||||||||||||| |||||| |||||| ||||||||||| ||||||    
T  6091 gagtcatatccagagttgtttgcatgaggtacattttcgaggacgaaaatattctaagtgggggagagttgtaatgccctattttattatttatttattt 6190  T
Q  204 tatcgagtttag 215  Q
    ||| ||||||||    
T  6191 tattgagtttag 6202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 118; Significance: 3e-60; HSPs: 2)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 4 - 217
Target Start/End: Original strand, 59173 - 59386
Alignment:
Q  4 agtggagaagcagagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctg 103  Q
    |||| |||||| |||||||||||| ||||||||||||||| ||||||||| ||||||||| ||||||||||||| || ||| |||||||| |||||||||    
T  59173 agtgaagaagctgagaggcaaggatatacctcttgtgaaaatcgtttgggaaggagcggctggtgaaagtttgaagtgggaattggagagtaagatgctg 59272  T
Q  104 gagtcgtatccagatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccctaatttattatttagttattt 203  Q
    |||||||||||  | |||||| ||||||||  |||||| |||||||||||||||||||||||||  | |||||||| |||| ||||||||||| ||||||    
T  59273 gagtcgtatccgtagttatttgaatgagatgtattttcaaggacgaaaatattctaagtggggggaagttgtaacgtcctattttattatttatttattt 59372  T
Q  204 tatcgagtttagtg 217  Q
    |||| |||||||||    
T  59373 tatcaagtttagtg 59386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 20 - 117
Target Start/End: Complemental strand, 19009 - 18912
Alignment:
Q  20 ggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatccaga 117  Q
    |||||||| ||||| ||||||| |||||||||||  |||||| | ||||||||||| || | |||| |||| || ||||||| ||| || ||||||||    
T  19009 ggcaaggaaataccccttgtgagagtcgtttgggacggagcgactggtgaaagtttaacttgggagatggatagtaagatgcgggattcttatccaga 18912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 111; Significance: 4e-56; HSPs: 75)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 4 - 202
Target Start/End: Original strand, 15016189 - 15016387
Alignment:
Q  4 agtggagaagcagagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctg 103  Q
    |||| |||||| ||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||| | | |||||||| ||| || ||    
T  15016189 agtgaagaagctgagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcagctggtgaaagtttgacgtggaaattggagagtaagttgttg 15016288  T
Q  104 gagtcgtatccagatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccctaatttattatttagttatt 202  Q
    ||||| |||||| | || |||  ||||| |||||||||||||||||||||||||||||||||||||| |||||||| | || ||||||||||| |||||    
T  15016289 gagtcatatccaaagttgtttgcatgaggtacattttcgaggacgaaaatattctaagtgggggagagttgtaacgtcgtattttattatttatttatt 15016387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 179 - 259
Target Start/End: Complemental strand, 6003580 - 6003500
Alignment:
Q  179 gccctaatttattatttagttattttatcgagtttagtgtcattttgaataatttatgtgaataattgcgatgtgtgatgt 259  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  6003580 gccctaatttattatttagttattttatcgagtttagtgtcattttgaataatttatgtgaataattacgatgtgtgatgt 6003500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 16 - 204
Target Start/End: Complemental strand, 15208372 - 15208184
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    ||||||||| ||| |||||||||||||||||||||||| ||||| ||| |||||||| || |||| |||||||||||| |||||||||||||| |||||     
T  15208372 gagaggcaaagaggtacctcttgtgaaagtcgtttgggaaggagtggctggtgaaagcttaacgtgggagttggagagtaagatgctggagtcttatccg 15208273  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccctaatttattatttagttatttt 204  Q
    || || |||  | ||| || ||||||||||||||||||  | ||||| |||| || ||||||||||||  || |||||||  |||||||    
T  15208272 gagttgtttgcaagaggtaaattttcgaggacgaaaatcctataagttggggggatttgtaacgccctctttaattatttgattatttt 15208184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 16 - 204
Target Start/End: Complemental strand, 15247328 - 15247140
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    ||||||||| |||||| ||||||||||||||||||||| ||||| ||| |||||||| || | || |||||||||||| |||||||||||||| ||||||    
T  15247328 gagaggcaaagagatatctcttgtgaaagtcgtttgggaaggagtggctggtgaaagcttaatgtgggagttggagagtaagatgctggagtcttatcca 15247229  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccctaatttattatttagttatttt 204  Q
    || || |||  | ||| || ||||||||||||||||||  | ||||| |||| || ||||||||||||  || |||||||  |||||||    
T  15247228 gagttgtttgcacgaggtaaattttcgaggacgaaaatcctataagttggggggagttgtaacgccctctttaattatttgattatttt 15247140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 16 - 182
Target Start/End: Complemental strand, 320714 - 320548
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    ||||||||| |||||||||||| |||||||||||||||  |||||| | |||||||| || | || |||| | ||||| |||||||||||||| ||||||    
T  320714 gagaggcaaagagatacctcttatgaaagtcgtttgggacggagcgactggtgaaagcttaatgtgggagatagagagtaagatgctggagtcttatcca 320615  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccc 182  Q
    || || |||  ||||| || |||||||||||||||||| || ||||| ||||||| |||||||||||    
T  320614 gagttgtttgcatgaggtaaattttcgaggacgaaaatcttataagttggggagagttgtaacgccc 320548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 16 - 182
Target Start/End: Complemental strand, 6600228 - 6600062
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    ||||||||| ||||||||||| |||||||||||||||   |||||| | |||||||| ||||||| |||| | ||||| ||||||||||| |||||||||    
T  6600228 gagaggcaaagagatacctctcgtgaaagtcgtttggtcgggagcgactggtgaaagcttgacgtgggagcttgagagtaagatgctggaatcgtatcca 6600129  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccc 182  Q
    || || |||   | || || |||||||||||||||||| || ||||||||||||| |||||||||||    
T  6600128 gagttgtttacttaaggtaaattttcgaggacgaaaatcttttaagtgggggagagttgtaacgccc 6600062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 16 - 182
Target Start/End: Complemental strand, 10005081 - 10004915
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    ||||||||||||||||||||| |||| ||||||||||   |||||| | |||||||| ||||||| |||  | ||||| |||||||||||||| ||||||    
T  10005081 gagaggcaaggagatacctctcgtgagagtcgtttggtcgggagcgactggtgaaagcttgacgtgggaacttgagagtaagatgctggagtcttatcca 10004982  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccc 182  Q
    || || |||   |||| || |||||||||||||||||| || ||||||||||||| |||||||||||    
T  10004981 gagttgtttgcttgaggtaaattttcgaggacgaaaatcttttaagtgggggagagttgtaacgccc 10004915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 16 - 182
Target Start/End: Complemental strand, 10905691 - 10905525
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    ||||||||||||||||||||| |||| ||||||||||   |||||| | |||||||| ||||||| |||  | ||||| |||||||||||||| ||||||    
T  10905691 gagaggcaaggagatacctctcgtgagagtcgtttggtcgggagcgactggtgaaagcttgacgtgggaacttgagagtaagatgctggagtcttatcca 10905592  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccc 182  Q
    || || |||   |||| || |||||||||||||||||| || ||||||||||||| |||||||||||    
T  10905591 gagttgtttgcttgaggtaaattttcgaggacgaaaatcttttaagtgggggagagttgtaacgccc 10905525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 16 - 182
Target Start/End: Complemental strand, 12497729 - 12497563
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    |||||||||||| ||||| ||||||| |||||||||||  |||||| | |||||||| ||||||| |||| | ||||| |||||||||||||| ||||||    
T  12497729 gagaggcaaggaaataccccttgtgagagtcgtttgggacggagcgactggtgaaagcttgacgtgggagctagagagtaagatgctggagtcttatcca 12497630  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccc 182  Q
    || || |||   |||| || |||||||||||||||||| || ||||| ||||||| |||||||||||    
T  12497629 gagttgtttgcttgaggtaaattttcgaggacgaaaatcttttaagttggggagagttgtaacgccc 12497563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 16 - 182
Target Start/End: Complemental strand, 13252171 - 13252005
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    ||||||||||||||||||||| |||| ||||||||||   |||||| | |||||||| ||||||| |||| | ||||| |||||||||||||| || |||    
T  13252171 gagaggcaaggagatacctctcgtgagagtcgtttggtcgggagcgactggtgaaagcttgacgtgggagcttgagagtaagatgctggagtcttaccca 13252072  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccc 182  Q
    || || |||   |||| || |||||||||||||||||| || ||||||||||||| |||||||||||    
T  13252071 gagttgtttgcttgaggtaaattttcgaggacgaaaatcttttaagtgggggagagttgtaacgccc 13252005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 16 - 182
Target Start/End: Original strand, 15403159 - 15403325
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    ||||||||||||||||||||| |||| ||||||||||   |||||| | |||||||| ||||||| |||| | ||||| || ||||||||||| ||||||    
T  15403159 gagaggcaaggagatacctctcgtgagagtcgtttggacgggagcgactggtgaaagcttgacgtgggagcttgagagtaaaatgctggagtcttatcca 15403258  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccc 182  Q
    || || |||   |||| || |||||||||||||||||| || ||||||||||||| |||||||||||    
T  15403259 gagttgtttgcttgaggtaaattttcgaggacgaaaatcttttaagtgggggagagttgtaacgccc 15403325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 16 - 182
Target Start/End: Complemental strand, 16635254 - 16635088
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    ||||||||||||||||||||| |||| ||||||||||   |||||| | |||||||| ||||||| |||| | ||||| |||||||||||||| ||||||    
T  16635254 gagaggcaaggagatacctctcgtgagagtcgtttggtcgggagcgactggtgaaagcttgacgtgggagcttgagagtaagatgctggagtcttatcca 16635155  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccc 182  Q
    || || |||   |||| || ||||||||||||||||||  | ||||||||||||| |||||||||||    
T  16635154 gagttgtttgcttgaggtaaattttcgaggacgaaaatcctttaagtgggggagagttgtaacgccc 16635088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 16 - 182
Target Start/End: Complemental strand, 43162578 - 43162412
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    ||||||||||||||||||||| |||| ||||||||||   |||||| | |||||||| ||||||| |||| | ||||| |||||||||||||| ||||||    
T  43162578 gagaggcaaggagatacctctcgtgagagtcgtttggtcgggagcgactggtgaaagcttgacgtgggagcttgagagtaagatgctggagtcttatcca 43162479  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccc 182  Q
    || || |||   |||| || ||||||||||||||||||  | ||||||||||||| |||||||||||    
T  43162478 gagttgtttgcttgaggtaaattttcgaggacgaaaatcctttaagtgggggagagttgtaacgccc 43162412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 16 - 182
Target Start/End: Complemental strand, 48424928 - 48424762
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    ||||||||||||||||||||| |||| ||||||||||   |||||| | |||||||| ||||||| |||| | ||||| |||||||||||||| ||||||    
T  48424928 gagaggcaaggagatacctctcgtgagagtcgtttggtcgggagcgactggtgaaagcttgacgtgggagcttgagagtaagatgctggagtcttatcca 48424829  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccc 182  Q
    || || |||   |||| || ||||||||||||||||||  | ||||||||||||| |||||||||||    
T  48424828 gagttgtttgcttgaggtaaattttcgaggacgaaaatcctttaagtgggggagagttgtaacgccc 48424762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 16 - 215
Target Start/End: Original strand, 16807575 - 16807774
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    |||||||||||||||||| ||||| | ||||||| |||  |||||| | |||||||| ||||| | |||| | ||||| |||||||||||||| ||||||    
T  16807575 gagaggcaaggagataccccttgttagagtcgttagggctggagcgactggtgaaagcttgacatgggagcttgagagtaagatgctggagtcttatcca 16807674  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccctaatttattatttagttattttatcgagtttag 215  Q
    || || |||   ||||||| |||||||||||||||||| || ||||| ||||||| ||| || |||| | ||  ||||||| |||||| |||||||||||    
T  16807675 gaattgtttgcttgagataaattttcgaggacgaaaatcttttaagttggggagagttgcaatgcccaatttgtttatttatttatttaatcgagtttag 16807774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 16 - 182
Target Start/End: Original strand, 15348894 - 15349060
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    ||||||||||||||||||||| || | ||||||||||   |||||| | |||||||| ||||||| |||| | ||||| |||||||||||||| ||||||    
T  15348894 gagaggcaaggagatacctctcgtaagagtcgtttggacgggagcgactggtgaaagcttgacgtgggagcttgagagtaagatgctggagtcttatcca 15348993  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccc 182  Q
    || || |||   | || || |||||||||||||||||| || ||||||||||||| |||||||||||    
T  15348994 gagttgtttgcttaaggtaaattttcgaggacgaaaatcttttaagtgggggagagttgtaacgccc 15349060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 16 - 182
Target Start/End: Original strand, 15590041 - 15590207
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    ||||||||||||||||||||| |||| ||||||||||   |||||| | |||||||| ||||||| |||| | ||||| |||||||||||||| |||| |    
T  15590041 gagaggcaaggagatacctctcgtgagagtcgtttggtcgggagcgactggtgaaagcttgacgtgggagcttgagagtaagatgctggagtcttatcta 15590140  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccc 182  Q
    || || |||   |||| || ||||||||||||||| || || ||||||||||||| |||||||||||    
T  15590141 gagttgtttgcttgaggtaaattttcgaggacgaagatcttttaagtgggggagagttgtaacgccc 15590207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 16 - 182
Target Start/End: Original strand, 15725582 - 15725748
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    ||||||||||||||||||||| |||| ||||||||||    ||||| | |||||||| ||||||| |||| | ||||| |||||||||||||| ||||||    
T  15725582 gagaggcaaggagatacctctcgtgagagtcgtttggacgagagcgactggtgaaagcttgacgtgggagcttgagagtaagatgctggagtcttatcca 15725681  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccc 182  Q
    || || |||   | || || |||||||||||||||||| || ||||||||||||| |||||||||||    
T  15725682 gagttgtttgcttaaggtaaattttcgaggacgaaaatcttttaagtgggggagagttgtaacgccc 15725748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 16 - 182
Target Start/End: Original strand, 26793048 - 26793214
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    ||||||||||||||||||||| |||| ||||||||||   |||||| | |||||||| ||||||| |||| | ||||| |||||||||||||| ||||||    
T  26793048 gagaggcaaggagatacctctcgtgagagtcgtttggacgggagcgactggtgaaagcttgacgtgggagcttgagagtaagatgctggagtcttatcca 26793147  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccc 182  Q
     | || |||   |||| || ||||||||||| |||||| || ||||||||||||| |||||||||||    
T  26793148 tagttgtttgcttgaggtaaattttcgaggaagaaaatcttttaagtgggggagagttgtaacgccc 26793214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 16 - 215
Target Start/End: Original strand, 11297172 - 11297372
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    |||||||||||||||||| ||||||| | |||||| ||  |||||| | | |||||| ||||||| |||| | ||||| |||||||||||||| |||| |    
T  11297172 gagaggcaaggagataccccttgtgagaatcgtttaggacggagcgactgatgaaagcttgacgtgggagcttgagagtaagatgctggagtcttatcta 11297271  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccctaattta-ttatttagttattttatcgagttta 214  Q
    ||||| |||   |||| || |||||||||||||||||| || ||||| ||||||| |||||||||||   |||| ||| ||| |||||| ||||||||||    
T  11297272 gatttgtttgcttgaggtaaattttcgaggacgaaaatcttttaagttggggagagttgtaacgcccacttttatttaattaattatttaatcgagttta 11297371  T
Q  215 g 215  Q
    |    
T  11297372 g 11297372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 16 - 182
Target Start/End: Original strand, 14877148 - 14877314
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    |||||||||||| ||||||||||||| ||||||||||   |||||| | |||||||| ||||||| |||| | ||||| |||||||||||||| |||| |    
T  14877148 gagaggcaaggatatacctcttgtgagagtcgtttggaacggagcgactggtgaaagcttgacgtgggagctagagagtaagatgctggagtcttatcta 14877247  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccc 182  Q
    || || |||   |||| || ||||| |||||||||||| || ||||| ||||||| |||||||||||    
T  14877248 gagttgtttgcttgaggtaaattttagaggacgaaaatcttataagttggggagagttgtaacgccc 14877314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 20 - 182
Target Start/End: Complemental strand, 16370890 - 16370729
Alignment:
Q  20 ggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatccagatt 119  Q
    |||||||| ||||| ||||||| ||||||||||| ||||||| | |||||||| ||||||| |||| | ||||| |||||||| ||||| |||||||| |    
T  16370890 ggcaaggaaataccccttgtgagagtcgtttggg-aggagcgactggtgaaagcttgacgtgggagcttgagagtaagatgctagagtcttatccagagt 16370792  T
Q  120 tatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccc 182  Q
    | |||  ||||| || |||||||||||||||||| || | ||| ||||||| |||||||||||    
T  16370791 tgtttgcatgaggtaaattttcgaggacgaaaatcttgttagttggggagagttgtaacgccc 16370729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 17 - 182
Target Start/End: Complemental strand, 16691640 - 16691475
Alignment:
Q  17 agaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatccag 116  Q
    ||||||||||||||| | ||||| | |||||||||||  |||||| | |||||||| || |||| |||| | ||||| |||||||||||||| |||||||    
T  16691640 agaggcaaggagatatcccttgttagagtcgtttgggctggagcgactggtgaaagcttaacgtgggagcttgagagtaagatgctggagtcttatccag 16691541  T
Q  117 atttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccc 182  Q
    | || |||   |||| || ||||||||||| |||||| || ||||||||||||| |||||||||||    
T  16691540 agttgtttgcttgaggtaaattttcgaggatgaaaatcttttaagtgggggagagttgtaacgccc 16691475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 16 - 184
Target Start/End: Complemental strand, 31944963 - 31944796
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    |||||||||||||||||| ||||||| |||||||||||  |||||| | |||||||||||||| | |||| ||||||| | ||||| |||||||||||||    
T  31944963 gagaggcaaggagataccccttgtgagagtcgtttgggacggagcgactggtgaaagtttgacttgggagctggagagtaggatgcgggagtcgtatcca 31944864  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgcccta 184  Q
    || || |||   |||| ||   ||||||||||| ||||  ||||||| ||||||| |||||||||||||    
T  31944863 gagttgtttgtttgaggtaagatttcgaggacg-aaattctctaagttggggagagttgtaacgcccta 31944796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 16 - 215
Target Start/End: Complemental strand, 15338750 - 15338551
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    ||||||||||||||||||||| |||| |||| |||||   |||||| | |||||||| ||||||| |||| | ||||| || ||||||||||| | ||||    
T  15338750 gagaggcaaggagatacctctcgtgagagtcatttggacgggagcgactggtgaaagcttgacgtgggagcttgagagtaaaatgctggagtcttgtcca 15338651  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccctaatttattatttagttattttatcgagtttag 215  Q
    || || |||   |||| || |||||||||||||||||| || |||||||| |||| |||||||||||   ||| ||| ||  |||||| |||||||||||    
T  15338650 gagttgtttgcttgaggtaaattttcgaggacgaaaatcttttaagtgggagagagttgtaacgcccacttttgttaattgcttatttaatcgagtttag 15338551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 20 - 178
Target Start/End: Original strand, 16757238 - 16757396
Alignment:
Q  20 ggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatccagatt 119  Q
    ||||| ||||||||||| |||| ||||||||||   |||||| | |||||||| ||||||| |||| | ||||| ||||||||||||||||||||| | |    
T  16757238 ggcaaagagatacctctcgtgagagtcgtttggtcgggagcgactggtgaaagcttgacgtgggagcttgagagtaagatgctggagtcgtatccatagt 16757337  T
Q  120 tatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaac 178  Q
    | |||   | || || |||||||||||||||||| || ||||||||||||| |||||||    
T  16757338 tgtttacttaaggtaaattttcgaggacgaaaatcttttaagtgggggagagttgtaac 16757396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 20 - 182
Target Start/End: Original strand, 20062707 - 20062869
Alignment:
Q  20 ggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatccagatt 119  Q
    ||||| ||||||||||| |||| ||||||||||   |||||| | |||||||| ||||||| |||| | ||||| ||||||||||||||  ||||||| |    
T  20062707 ggcaaagagatacctctcgtgagagtcgtttggtcgggagcgactggtgaaagcttgacgtgggagcttgagagtaagatgctggagtctaatccagagt 20062806  T
Q  120 tatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccc 182  Q
    | |||   |||| || ||||||||| |||||||| || ||||||||||||| |||||||||||    
T  20062807 tgtttgcttgaggtaaattttcgagtacgaaaatcttttaagtgggggagagttgtaacgccc 20062869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 15 - 184
Target Start/End: Complemental strand, 14974347 - 14974178
Alignment:
Q  15 agagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcc 114  Q
    ||||||||||||||||||||||||||| ||||||||||   ||| |  | |||||||| || |||| |||| | ||||| ||||||||||| || |||||    
T  14974347 agagaggcaaggagatacctcttgtgagagtcgtttggtacggatccactggtgaaagcttcacgtgggagctagagagtaagatgctggaatcttatcc 14974248  T
Q  115 agatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgcccta 184  Q
    ||| || |||  ||||| || |||||||||||||||||| || ||||| | ||||| |||| ||||||||    
T  14974247 agagttgtttgcatgaggtaaattttcgaggacgaaaatcttataagttgaggagagttgttacgcccta 14974178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 16 - 184
Target Start/End: Original strand, 31689261 - 31689428
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    |||||||||||||||||| | ||||| |||||||||||  |||||| | |||||||||||||| | |||| ||||||| | ||||| |||||||||||||    
T  31689261 gagaggcaaggagataccccctgtgagagtcgtttgggacggagcgactggtgaaagtttgacttgggagctggagagtaggatgcgggagtcgtatcca 31689360  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgcccta 184  Q
    || || |||   |||| ||   ||||||||||| ||||  ||||||| ||||||| |||||||||||||    
T  31689361 gagttgtttgtttgaggtaagatttcgaggacg-aaattctctaagttggggagagttgtaacgcccta 31689428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 16 - 183
Target Start/End: Complemental strand, 9522200 - 9522033
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    |||||||||||| ||||||||||||| |||||||||||  |||||| | |||||||| || |||| |||| | ||||| |||||| |||| || ||||||    
T  9522200 gagaggcaaggatatacctcttgtgagagtcgtttgggacggagcgactggtgaaagcttaacgtgggagctagagagtaagatgttggaatcttatcca 9522101  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccct 183  Q
    || || |||   |||| || |||||||||||||||||| || |||||  |||||| |||||| |||||    
T  9522100 gagttgtttgcttgaggtaaattttcgaggacgaaaatcttataagtttgggagagttgtaaagccct 9522033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 17 - 183
Target Start/End: Complemental strand, 9514224 - 9514058
Alignment:
Q  17 agaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatccag 116  Q
    ||||||||||| ||||||||||||| |||||||||||  |||||| | |||||||| || |||| |||| | ||||| |||||| |||| || |||||||    
T  9514224 agaggcaaggatatacctcttgtgagagtcgtttgggacggagcgactggtgaaagcttaacgtgggagctagagagtaagatgttggaatcttatccag 9514125  T
Q  117 atttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccct 183  Q
    | || |||   |||| || |||||||||||||||||| || |||||  |||||| |||||| |||||    
T  9514124 agttgtttgcttgaggtaaattttcgaggacgaaaatcttataagtttgggagagttgtaaagccct 9514058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 16 - 182
Target Start/End: Original strand, 16492830 - 16492996
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    |||||||||||||||||||||| ||| || ||||||||  | |||| | |||||||| |||||||  ||| | ||||| ||||||||||| || ||||||    
T  16492830 gagaggcaaggagatacctcttatgagagacgtttgggacgaagcgactggtgaaagcttgacgtgcgagctagagagtaagatgctggaatcatatcca 16492929  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccc 182  Q
    || || |||   |||| || ||||| |||||||||||| || ||||| ||||||| |||||||||||    
T  16492930 gagttgtttgcttgaggtaaattttagaggacgaaaatgttataagttggggagagttgtaacgccc 16492996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 20 - 182
Target Start/End: Original strand, 53385671 - 53385833
Alignment:
Q  20 ggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatccagatt 119  Q
    ||||| ||||||||||| |||| ||||||||||   |||||| | || ||||| ||||||| |||| | ||||| ||||||||||||||||||||||| |    
T  53385671 ggcaaagagatacctctcgtgagagtcgtttggtcgggagcgactggcgaaagcttgacgtgggagcttgagagtaagatgctggagtcgtatccagagt 53385770  T
Q  120 tatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccc 182  Q
    | |||   | || || ||| | |||||||||||| || ||||||||||||| |||||||||||    
T  53385771 tgtttacttaaggtaaattattgaggacgaaaatcttttaagtgggggagagttgtaacgccc 53385833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 170 - 254
Target Start/End: Complemental strand, 48631728 - 48631644
Alignment:
Q  170 aattgtaacgccctaatttattatttagttattttatcgagtttagtgtcattttgaataatttatgtgaataattgcgatgtgt 254  Q
    |||||||||||| || ||| ||||||| |||||||||||||||||||||| ||||| ||||||||| |||||||||| |||||||    
T  48631728 aattgtaacgccatattttcttatttaattattttatcgagtttagtgtctttttgtataatttatttgaataattgtgatgtgt 48631644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 16 - 111
Target Start/End: Original strand, 16330297 - 16330392
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgta 111  Q
    |||||| ||||||||||||||||||| |||||||||||| |||||| | |||||| ||||||| | |||| ||||||| ||||||| |||||||||    
T  16330297 gagaggtaaggagatacctcttgtgagagtcgtttggggtggagcgactggtgaaggtttgacttgggagctggagagtaagatgcgggagtcgta 16330392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 16 - 182
Target Start/End: Complemental strand, 17489331 - 17489165
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    |||||||||||||||||||||||||| |||||||||||   ||||| | |||||||| || |||| |||| | ||||| |||||| |||| || ||||||    
T  17489331 gagaggcaaggagatacctcttgtgagagtcgtttgggacagagcgactggtgaaagcttaacgtgggagctagagagtaagatgttggaatcttatcca 17489232  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccc 182  Q
    || || |||   |||| || |||||||| ||||| ||| || ||||| ||||||| |||||| ||||    
T  17489231 gagttgtttgcttgaggtaaattttcgacgacgacaatcttataagttggggagagttgtaaagccc 17489165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 186 - 254
Target Start/End: Original strand, 3526825 - 3526893
Alignment:
Q  186 tttattatttagttattttatcgagtttagtgtcattttgaataatttatgtgaataattgcgatgtgt 254  Q
    ||||||||||| |||||||||||||||||||||| ||||| ||||||||| |||||||||| |||||||    
T  3526825 tttattatttatttattttatcgagtttagtgtctttttgtataatttatttgaataattgtgatgtgt 3526893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 111
Target Start/End: Original strand, 16338698 - 16338793
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgta 111  Q
    |||||| ||||||||||||||||||| |||||| ||||| ||| || | |||||||||||||| | |||| ||||||| ||||||| |||||||||    
T  16338698 gagaggtaaggagatacctcttgtgagagtcgtctggggtggaacgactggtgaaagtttgacttgggagctggagagtaagatgcgggagtcgta 16338793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 43 - 182
Target Start/End: Complemental strand, 16810828 - 16810689
Alignment:
Q  43 agtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatccagatttatttcaatgagatacattttcg 142  Q
    |||||||||||  |||||| | |||||||| ||||||| |||| | ||||| |||||||| | ||| |||||||| || |||   |||| || |||||||    
T  16810828 agtcgtttgggacggagcgactggtgaaagcttgacgtgggagcttgagagtaagatgctagcgtcttatccagagttgtttgcttgaggtaaattttcg 16810729  T
Q  143 aggacgaaaatattctaagtgggggagaattgtaacgccc 182  Q
    ||||||||||| || ||||| ||||||| |||||||||||    
T  16810728 aggacgaaaatcttataagttggggagagttgtaacgccc 16810689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 89 - 182
Target Start/End: Complemental strand, 6609868 - 6609775
Alignment:
Q  89 gagagcaagatgctggagtcgtatccagatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccc 182  Q
    ||||| |||||||||||||| |||||||| || |||   |||| || |||||||||||||||||| || ||||||||||||| |||||||||||    
T  6609868 gagagtaagatgctggagtcttatccagagttgtttgcttgaggtaaattttcgaggacgaaaatcttttaagtgggggagagttgtaacgccc 6609775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 16 - 93
Target Start/End: Complemental strand, 10383457 - 10383380
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagag 93  Q
    |||||| || |||||||||||||||| |||||||||||| |||||||| |||||||||||||| | |||| |||||||    
T  10383457 gagaggtaaagagatacctcttgtgagagtcgtttggggtggagcggctggtgaaagtttgacttgggagctggagag 10383380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 16 - 117
Target Start/End: Complemental strand, 15227140 - 15227039
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    ||||||||| ||||||||||| || ||||| || |||||||||||  | |||||||||||||| | |||| ||||||| ||||| |||||||| ||||||    
T  15227140 gagaggcaaagagatacctctagtaaaagttgtgtggggaggagcatctggtgaaagtttgacatgggagctggagagtaagattctggagtcttatcca 15227041  T
Q  116 ga 117  Q
    ||    
T  15227040 ga 15227039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 173 - 254
Target Start/End: Original strand, 48043115 - 48043195
Alignment:
Q  173 tgtaacgccctaatttattatttagttattttatcgagtttagtgtcattttgaataatttatgtgaataattgcgatgtgt 254  Q
    |||||||||||| ||||||||||| |||||||||||||||||||||| |||||  |||||||| |||||||| | |||||||    
T  48043115 tgtaacgccctattttattattta-ttattttatcgagtttagtgtctttttgtttaatttatttgaataatggggatgtgt 48043195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 184
Target Start/End: Original strand, 13972758 - 13972925
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    |||||| || |||||||| ||||||| |||||||||||| |||||| | || |||||||| || | |||| |||| || ||||||| ||||||||| |||    
T  13972758 gagaggtaaagagataccgcttgtgagagtcgtttggggtggagcgactggagaaagtttaacttgggagctggaaagtaagatgcgggagtcgtaccca 13972857  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgcccta 184  Q
    || || |||   |||| ||   ||||||||||| ||||  ||||||| ||||||| |||||||||||||    
T  13972858 gagttgtttgtttgaggtaagatttcgaggacg-aaatcctctaagttggggagagttgtaacgcccta 13972925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 184
Target Start/End: Complemental strand, 14086164 - 14085997
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    |||||| || |||||||| ||||||| |||||||||||| |||||| | || |||||||| || | |||| |||| || ||||||| ||||||||| |||    
T  14086164 gagaggtaaagagataccgcttgtgagagtcgtttggggtggagcgactggagaaagtttaacttgggagctggaaagtaagatgcgggagtcgtaccca 14086065  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgcccta 184  Q
    || || |||   |||| ||   ||||||||||| ||||  ||||||| ||||||| |||||||||||||    
T  14086064 gagttgtttgtttgaggtaagatttcgaggacg-aaatcctctaagttggggagagttgtaacgcccta 14085997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 180
Target Start/End: Complemental strand, 14571339 - 14571176
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    |||||||||||| |||||||| ||||| || |||||||| ||||   |||||||||||||||| | |||| | ||||| ||||||| |||||| ||||||    
T  14571339 gagaggcaaggatatacctctagtgaaggttgtttggggtggagtaaccggtgaaagtttgacttgggagctagagagtaagatgcgggagtcttatcca 14571240  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgc 180  Q
    || || |||   |||| ||   ||||||||||| ||||  ||||||| ||||||| |||||||||    
T  14571239 gagttgtttgtttgaggtaatatttcgaggacg-aaattctctaagttggggagagttgtaacgc 14571176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 16 - 111
Target Start/End: Original strand, 11961672 - 11961767
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgta 111  Q
    |||||| || |||||||||||||||| |||||||||||| |||||| |  ||||||||||||| | |||| ||||||| ||||| | |||||||||    
T  11961672 gagaggtaaagagatacctcttgtgagagtcgtttggggtggagcgactagtgaaagtttgacttgggagctggagagtaagatccgggagtcgta 11961767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 173 - 244
Target Start/End: Complemental strand, 25202549 - 25202478
Alignment:
Q  173 tgtaacgccctaatttattatttagttattttatcgagtttagtgtcattttgaataatttatgtgaataat 244  Q
    ||||||| || | ||||||||||| |||||||||||||||||||||| ||||| ||||||||| ||||||||    
T  25202549 tgtaacgtcccattttattatttatttattttatcgagtttagtgtctttttgtataatttatttgaataat 25202478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 138 - 224
Target Start/End: Complemental strand, 36526562 - 36526476
Alignment:
Q  138 tttcgaggacgaaaatattctaagtgggggagaattgtaacgccctaatttattatttagttattttatcgagtttagtgtcatttt 224  Q
    |||||||||||||| | |||||||| ||||||| ||||||||||||| ||||||||||| ||||||  | |||||||| ||| ||||    
T  36526562 tttcgaggacgaaattcttctaagttggggagagttgtaacgccctattttattatttacttatttatttgagtttagagtcttttt 36526476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 16 - 184
Target Start/End: Original strand, 18134984 - 18135151
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    |||||||||||| ||||||||  |||| || |||||||| ||||   ||||||| |||||||| | |||| ||||||| |||||||  |||| |||| ||    
T  18134984 gagaggcaaggatatacctctaatgaaggttgtttggggtggagtaaccggtgagagtttgacttgggagctggagagtaagatgcgagagttgtataca 18135083  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgcccta 184  Q
    || || |||   |||| || | ||||||||||| ||||  ||||||| ||||||| |||||||||||||    
T  18135084 gagttgtttgtttgaggtaaaatttcgaggacg-aaattctctaagttggggagagttgtaacgcccta 18135151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 136 - 215
Target Start/End: Original strand, 13028766 - 13028845
Alignment:
Q  136 attttcgaggacgaaaatattctaagtgggggagaattgtaacgccctaatttattatttagttattttatcgagtttag 215  Q
    ||||||||||||||||||  | ||||||||||||| ||||||| ||||  || |||||||| ||||||||| ||||||||    
T  13028766 attttcgaggacgaaaattctataagtgggggagagttgtaacaccctctttaattatttaattattttatagagtttag 13028845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 69 - 170
Target Start/End: Complemental strand, 11852991 - 11852890
Alignment:
Q  69 aaagtttgacgtaggagttggagagcaagatgctggagtcgtatccagatttatttcaatgagatacattttcgaggacgaaaatattctaagtggggga 168  Q
    |||| ||||||| |||| | ||||| |||||||||||||| |||||||| || |||   |||| || |||||||||||||||||| || ||||| |||||    
T  11852991 aaagcttgacgtgggagctagagagtaagatgctggagtcttatccagagttttttgcttgaggtaaattttcgaggacgaaaatcttataagttgggga 11852892  T
Q  169 ga 170  Q
    ||    
T  11852891 ga 11852890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 117
Target Start/End: Original strand, 12854496 - 12854596
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    |||||||||||| |||||||| ||||  || ||||||||||||    | |||||||||||||| | |||| ||||||| |||||||||||||| ||||||    
T  12854496 gagaggcaaggatatacctctagtgatggttgtttggggaggaataactggtgaaagtttgacat-ggagctggagagtaagatgctggagtcttatcca 12854594  T
Q  116 ga 117  Q
    ||    
T  12854595 ga 12854596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 173 - 246
Target Start/End: Original strand, 12917031 - 12917104
Alignment:
Q  173 tgtaacgccctaatttattatttagttattttatcgagtttagtgtcattttgaataatttatgtgaataattg 246  Q
    ||||||||| || ||||||||||| |||||||||||||||||||| | |||   ||||||||| ||||||||||    
T  12917031 tgtaacgccatattttattatttatttattttatcgagtttagtgccttttaatataatttatttgaataattg 12917104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 16 - 184
Target Start/End: Original strand, 11304411 - 11304578
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    |||||||||||| |||||||| || || || |||||||| ||||   |  |||| |||||||| | |||| ||||||| ||||||| |||||| ||||||    
T  11304411 gagaggcaaggatatacctctagttaaggttgtttggggtggagtaactagtgagagtttgacttgggagctggagagtaagatgcgggagtcttatcca 11304510  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgcccta 184  Q
    ||  | ||| | |||| ||   ||||||||||| ||||  ||||||| ||||||| |||||||||||||    
T  11304511 gagctgtttgattgaggtaatatttcgaggacg-aaattctctaagttggggagagttgtaacgcccta 11304578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 173 - 243
Target Start/End: Original strand, 3160355 - 3160426
Alignment:
Q  173 tgtaacgccctaatttattatttagttattttatcgagtttagtgtcatttt-gaataatttatgtgaataa 243  Q
    |||||||||| | ||||||||||| |||||||||||||||||||| | |||| | ||||||||| |||||||    
T  3160355 tgtaacgcccaattttattatttatttattttatcgagtttagtgcctttttggtataatttatttgaataa 3160426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 114
Target Start/End: Original strand, 13323290 - 13323388
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcc 114  Q
    |||||| || |||||||||||||||| |||||||||||| |||||| |   |||||||||||| | | || ||||||| |||||||  || ||||||||    
T  13323290 gagaggtaaagagatacctcttgtgagagtcgtttggggtggagcgactactgaaagtttgacttggaagctggagagtaagatgcaagaatcgtatcc 13323388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 114
Target Start/End: Original strand, 16381569 - 16381663
Alignment:
Q  20 ggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcc 114  Q
    |||||||| ||||| ||||||| |||||||||||| |||||| | |||||||| ||||| | |||| |||| || ||||||| ||| || |||||    
T  16381569 ggcaaggaaataccccttgtgagagtcgtttggggcggagcgactggtgaaagcttgacttgggagctggaaagtaagatgcgggattcatatcc 16381663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 215
Target Start/End: Original strand, 1981639 - 1981719
Alignment:
Q  136 attttcgaggacgaaaatattctaagtgggggagaattgtaacgccctaattt-attatttagttattttatcgagtttag 215  Q
    |||||||||||||||||| || ||||| ||||||| |||||||||||   ||| |||| ||| |||||| |||||||||||    
T  1981639 attttcgaggacgaaaatcttttaagttggggagagttgtaacgcccacttttaattaattaattatttaatcgagtttag 1981719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 171 - 215
Target Start/End: Complemental strand, 11260202 - 11260158
Alignment:
Q  171 attgtaacgccctaatttattatttagttattttatcgagtttag 215  Q
    ||||||||||||||||||| |||||| ||||||||| ||||||||    
T  11260202 attgtaacgccctaatttaatatttatttattttattgagtttag 11260158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 184
Target Start/End: Original strand, 15953606 - 15953773
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    |||||||||||| |||||||| ||||| || |||| ||| ||||   ||| |||||||||||| | |||| | ||||| ||||||| |||||| |||||     
T  15953606 gagaggcaaggatatacctctagtgaaggttgtttagggtggagtaaccgatgaaagtttgacttgggagctagagagtaagatgcgggagtcttatcct 15953705  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgcccta 184  Q
    || || |||   |||| ||   ||||||||||| ||||  ||||||| ||||||| |||||| ||||||    
T  15953706 gagttgtttgcttgaggtaatatttcgaggacg-aaattctctaagttggggagagttgtaatgcccta 15953773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 172 - 215
Target Start/End: Complemental strand, 5216235 - 5216192
Alignment:
Q  172 ttgtaacgccctaatttattatttagttattttatcgagtttag 215  Q
    ||||||||||||| ||||||||||| ||||||||| ||||||||    
T  5216235 ttgtaacgccctattttattatttatttattttattgagtttag 5216192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 136 - 215
Target Start/End: Original strand, 15446490 - 15446569
Alignment:
Q  136 attttcgaggacgaaaatattctaagtgggggagaattgtaacgccctaatttattatttagttattttatcgagtttag 215  Q
    |||||| |||||||||||  | |||| |||||||| ||||||||||||  || |||||||| ||||||| | ||||||||    
T  15446490 attttcaaggacgaaaattctataagcgggggagagttgtaacgccctctttaattatttacttattttctagagtttag 15446569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 172 - 215
Target Start/End: Original strand, 35064364 - 35064407
Alignment:
Q  172 ttgtaacgccctaatttattatttagttattttatcgagtttag 215  Q
    ||||||||||||| ||||||||||| ||||||||| ||||||||    
T  35064364 ttgtaacgccctattttattatttatttattttattgagtttag 35064407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 215
Target Start/End: Complemental strand, 17050313 - 17050271
Alignment:
Q  173 tgtaacgccctaatttattatttagttattttatcgagtttag 215  Q
    |||||||||||| ||||||||||| ||||||||| ||||||||    
T  17050313 tgtaacgccctattttattatttatttattttattgagtttag 17050271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 214
Target Start/End: Original strand, 17533231 - 17533273
Alignment:
Q  172 ttgtaacgccctaatttattatttagttattttatcgagttta 214  Q
    ||||||||||||| ||||||||||| ||||||||| |||||||    
T  17533231 ttgtaacgccctattttattatttatttattttattgagttta 17533273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 214
Target Start/End: Complemental strand, 40808600 - 40808558
Alignment:
Q  172 ttgtaacgccctaatttattatttagttattttatcgagttta 214  Q
    ||||||||||||| ||||||||||| ||||||||| |||||||    
T  40808600 ttgtaacgccctattttattatttatttattttattgagttta 40808558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 215
Target Start/End: Original strand, 52311922 - 52311964
Alignment:
Q  173 tgtaacgccctaatttattatttagttattttatcgagtttag 215  Q
    |||||||||||| ||||||||||| ||||||||| ||||||||    
T  52311922 tgtaacgccctattttattatttatttattttattgagtttag 52311964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 138 - 215
Target Start/End: Original strand, 13937957 - 13938034
Alignment:
Q  138 tttcgaggacgaaaatattctaagtgggggagaattgtaacgccctaatttattatttagttattttatcgagtttag 215  Q
    |||||||||||||| | || |||| |||||||| ||||||||||||  || |||||||  ||||||||  ||||||||    
T  13937957 tttcgaggacgaaattcttttaagggggggagagttgtaacgccctctttaattatttgattattttaatgagtttag 13938034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 136 - 204
Target Start/End: Original strand, 15008991 - 15009057
Alignment:
Q  136 attttcgaggacgaaaatattctaagtgggggagaattgtaacgccctaatttattatttagttatttt 204  Q
    ||||||||||||||||||  | ||||| ||||||| ||||||||||| ||||  ||||||| |||||||    
T  15008991 attttcgaggacgaaaattctttaagttggggagagttgtaacgccccaatt--ttatttaattatttt 15009057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 85
Target Start/End: Original strand, 16412931 - 16413000
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggag 85  Q
    ||||||||||||||||||||| |||| ||||||||||   |||||| | ||| |||| ||||||| ||||    
T  16412931 gagaggcaaggagatacctctcgtgagagtcgtttggacgggagcgactggttaaagcttgacgtgggag 16413000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 138 - 203
Target Start/End: Original strand, 17690369 - 17690434
Alignment:
Q  138 tttcgaggacgaaaatattctaagtgggggagaattgtaacgccctaatttattatttagttattt 203  Q
    |||||||||||||| | || |||| |||| ||| ||||||||||||| |||| |||||| ||||||    
T  17690369 tttcgaggacgaaattcttttaaggggggtagagttgtaacgccctattttaatatttatttattt 17690434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 136 - 204
Target Start/End: Complemental strand, 19445024 - 19444958
Alignment:
Q  136 attttcgaggacgaaaatattctaagtgggggagaattgtaacgccctaatttattatttagttatttt 204  Q
    ||||||||||||||||||  | ||||| ||||||| ||||||||||| ||||  ||||||| |||||||    
T  19445024 attttcgaggacgaaaattctttaagttggggagagttgtaacgccccaatt--ttatttaattatttt 19444958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 173 - 234
Target Start/End: Original strand, 21845262 - 21845323
Alignment:
Q  173 tgtaacgccctaatttattatttagttattttatcgagtttagtgtcattttgaataattta 234  Q
    |||||||||||| ||||||||||| |||||||||  ||||||| ||| ||||  ||||||||    
T  21845262 tgtaacgccctattttattatttatttattttattaagtttagagtctttttttataattta 21845323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 170 - 215
Target Start/End: Original strand, 54330171 - 54330216
Alignment:
Q  170 aattgtaacgccctaatttattatttagttattttatcgagtttag 215  Q
    |||||||||| |||| ||||||||||| ||||||||| ||||||||    
T  54330171 aattgtaacgtcctattttattatttatttattttattgagtttag 54330216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 107; Significance: 1e-53; HSPs: 2)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 16 - 205
Target Start/End: Original strand, 38610 - 38800
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    |||||||||||||||||||||||||||||| ||||||| ||||||||| |||||||||||||| | ||| ||||| || ||||||||||| |||||||||    
T  38610 gagaggcaaggagatacctcttgtgaaagttgtttgggaaggagcggctggtgaaagtttgacatgggaattggaaagtaagatgctggaatcgtatcca 38709  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccctaattta-ttatttagttatttta 205  Q
    || || ||| |||||| ||||||||||||||| |||||||||| |||| |||||| ||||||||||||| |||| ||||||| ||||||||    
T  38710 gagttgtttgaatgaggtacattttcgaggactaaaatattcttagtgtgggagagttgtaacgccctattttatttatttatttatttta 38800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #2
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 20 - 191
Target Start/End: Original strand, 43293 - 43464
Alignment:
Q  20 ggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatccagatt 119  Q
    ||||||||||||||||||||||||||||||| || || |||||  |||||||||||||||| ||| ||||| || ||||||||||| ||||||||||| |    
T  43293 ggcaaggagatacctcttgtgaaagtcgttttggaagaagcggttggtgaaagtttgacgtgggaattggaaagtaagatgctggaatcgtatccagagt 43392  T
Q  120 tatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccctaatttatt 191  Q
    | ||| |||||| ||||| ||||||||| |||||||||||||||||||||| ||||||||||||| ||||||    
T  43393 tgtttgaatgaggtacatattcgaggacaaaaatattctaagtgggggagagttgtaacgccctattttatt 43464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 100; Significance: 2e-49; HSPs: 67)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 16 - 215
Target Start/End: Complemental strand, 23948817 - 23948618
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||| |||| ||||||||| || |||||| ||||||| ||||||    
T  23948817 gagaggcaaggagatacctcttgtgaaagtcgtttgggaaggagcggctggtgaaagtttaacgtcggagttggaaagtaagatgttggagtcttatcca 23948718  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccctaatttattatttagttattttatcgagtttag 215  Q
     | || |||   |||| |||||||||||||||||||||  | ||||| ||||||| ||||||||||||| || |||||||  ||||||||| ||||||||    
T  23948717 aagttgttttcttgaggtacattttcgaggacgaaaattctataagttggggagagttgtaacgccctatttaattatttgattattttattgagtttag 23948618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 16 - 215
Target Start/End: Original strand, 20396978 - 20397177
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    ||||||||||||||||||||||||||| ||||||| |||||||||| | |||||||| || |||| ||||||||| || |||||| ||||||| ||||||    
T  20396978 gagaggcaaggagatacctcttgtgaaggtcgtttagggaggagcgactggtgaaaggttaacgtgggagttggaaagtaagatgatggagtcttatcca 20397077  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccctaatttat-tatttagttattttatcgagttta 214  Q
    || || |||  ||||| ||||||||||||||||||||| || ||||| ||||||| ||||||| |||| |||||| |||||| ||||||||| | |||||    
T  20397078 gagttttttgcatgaggtacattttcgaggacgaaaattttataagttggggagagttgtaacaccct-atttatctatttaattattttattgggttta 20397176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 175 - 259
Target Start/End: Original strand, 22707976 - 22708060
Alignment:
Q  175 taacgccctaatttattatttagttattttatcgagtttagtgtcattttgaataatttatgtgaataattgcgatgtgtgatgt 259  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  22707976 taacgccctaatttattatttagttattttatcgagtttattgtcattttgaataatttatgtgaataattgcgatgtgtgatgt 22708060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 16 - 182
Target Start/End: Complemental strand, 19900472 - 19900306
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    |||||||||||||||||||||||||| |||||||||||  |||||| | |||||||| ||||||| |||| | ||||| |||||||||||||| ||||||    
T  19900472 gagaggcaaggagatacctcttgtgagagtcgtttgggacggagcgactggtgaaagcttgacgtgggagctagagagtaagatgctggagtcttatcca 19900373  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccc 182  Q
    || ||  ||   |||| || ||||||||||||||||||||| ||||| ||||||| |||||||||||    
T  19900372 gagttgcttgcttgaggtaaattttcgaggacgaaaatattataagttggggagagttgtaacgccc 19900306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 16 - 182
Target Start/End: Complemental strand, 21250870 - 21250704
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    |||||||||||||||||||||||||| |||||||||||  |||||||| |||||||| ||||||| |||| | || || |||||||||||||| ||||||    
T  21250870 gagaggcaaggagatacctcttgtgagagtcgtttgggacggagcggctggtgaaagcttgacgtgggagctagaaagtaagatgctggagtcttatcca 21250771  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccc 182  Q
    || || |||   |||| || |||||||||||||||||| || ||||| ||||||| |||||||||||    
T  21250770 gagttgtttgcttgaggtaaattttcgaggacgaaaatcttataagttggggagagttgtaacgccc 21250704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 16 - 182
Target Start/End: Original strand, 20018603 - 20018769
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    ||||||||||||||||||||| |||| ||||||||||   |||||| | |||||||| ||||||| |||| | ||||| |||||||||||||| ||||||    
T  20018603 gagaggcaaggagatacctctcgtgagagtcgtttggtcgggagcgactggtgaaagcttgacgtgggagcttgagagtaagatgctggagtcttatcca 20018702  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccc 182  Q
    || || |||   |||| || |||||||||||||||||| || ||||||||||||| |||||||||||    
T  20018703 gagttgtttgcttgaggtaaattttcgaggacgaaaatcttttaagtgggggagagttgtaacgccc 20018769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 17 - 215
Target Start/End: Original strand, 22121028 - 22121226
Alignment:
Q  17 agaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatccag 116  Q
    |||||||||||||||||||| |||| ||||||||||   |||||| | |||||||| ||||||| |||| | ||||| |||||||||||||| |||||||    
T  22121028 agaggcaaggagatacctctcgtgagagtcgtttggacgggagcgactggtgaaagcttgacgtgggagcttgagagtaagatgctggagtcttatccag 22121127  T
Q  117 atttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccctaatttattatttagttattttatcgagtttag 215  Q
    | || |||   |||| || |||||||||||||||||| || ||||||||||||| |||||||||||   ||| ||| ||  |||||| |||||||||||    
T  22121128 agttgtttgcttgaggtaaattttcgaggacgaaaatcttttaagtgggggagagttgtaacgcccacttttgttaattgcttatttaatcgagtttag 22121226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 16 - 183
Target Start/End: Original strand, 21167390 - 21167557
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    |||||||||||||||||| ||||||| |||||||||||  |||||| | |||||||| ||||||| |||| | ||||| |||||||||||||| ||||||    
T  21167390 gagaggcaaggagataccccttgtgagagtcgtttgggacggagcgactggtgaaagcttgacgtgggagcttgagagtaagatgctggagtcttatcca 21167489  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccct 183  Q
     | || |||   |||| || |||||||||||||||||| || ||||| ||||||| ||||||||||||    
T  21167490 aagttgtttgcttgaggtaaattttcgaggacgaaaatcttataagttggggagagttgtaacgccct 21167557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 22 - 204
Target Start/End: Original strand, 22433118 - 22433299
Alignment:
Q  22 caaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatccagattta 121  Q
    ||||||||||||||| |||||||||| ||||||||||||| | |||||||||||||| | |||| ||||||| |||||| ||||||| |||||||| ||     
T  22433118 caaggagatacctctagtgaaagtcgcttggggaggagcgactggtgaaagtttgacatgggagctggagagtaagatgatggagtcttatccagagttg 22433217  T
Q  122 tttcaatgagat-acattttcgaggacgaaaatattctaagtgggggagaattgtaacgccctaatttattatttagttatttt 204  Q
    |||  ||||| | | ||||||||||||| ||||  ||||||| ||||||| |||||||||||||| || ||||||| |||||||    
T  22433218 tttgcatgaggtaatattttcgaggacg-aaattctctaagttggggagagttgtaacgccctaa-ttgttatttaattatttt 22433299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 16 - 182
Target Start/End: Original strand, 17674876 - 17675042
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    ||||||||||||||||||||| |||| ||||||||||   |||||| |  ||||||| ||||||| |||| | ||||| |||||||||||||| ||||||    
T  17674876 gagaggcaaggagatacctctcgtgagagtcgtttggacgggagcgactagtgaaagcttgacgtgggagcttgagagtaagatgctggagtcttatcca 17674975  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccc 182  Q
    || || |||   |||| || |||||||||||||||||| || ||||||||||||| |||||||||||    
T  17674976 gaattgtttgcttgaggtaaattttcgaggacgaaaatcttttaagtgggggagagttgtaacgccc 17675042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 16 - 182
Target Start/End: Complemental strand, 22046302 - 22046136
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    |||||||||||||||||| ||||| | |||||||||||  |||||| | |||||||| ||||||| |||| | ||||| |||||||| ||||| ||||||    
T  22046302 gagaggcaaggagataccccttgttagagtcgtttgggctggagcgactggtgaaagcttgacgtgggagcttgagagtaagatgcttgagtcttatcca 22046203  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccc 182  Q
    ||||| |||   |||| || |||||||||||||||||| || ||||| ||||||| |||||||||||    
T  22046202 gatttgtttgcttgaggtaaattttcgaggacgaaaatcttttaagttggggagagttgtaacgccc 22046136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 16 - 182
Target Start/End: Original strand, 22179411 - 22179577
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    ||||||||| |||||||||||||||||||||||||||| ||||||| | |||||||| || |||| |||| | ||||| ||||||||||| ||  |||||    
T  22179411 gagaggcaatgagatacctcttgtgaaagtcgtttgggaaggagcgactggtgaaagcttaacgtgggagctagagagtaagatgctggaatctaatcca 22179510  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccc 182  Q
    || || |||  ||||| || |||||| ||||||||||| || ||||| ||||||| |||||||||||    
T  22179511 gagttgtttgcatgaggtaaattttctaggacgaaaatcttataagttggggagagttgtaacgccc 22179577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 16 - 204
Target Start/End: Complemental strand, 20388041 - 20387852
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    ||||||||| ||||||||||  || ||||||||||||||||||||||  |||||||||||||| | |||  ||||||| |||||||||||||| ||||||    
T  20388041 gagaggcaacgagatacctccagtaaaagtcgtttggggaggagcggttggtgaaagtttgacatgggaactggagagtaagatgctggagtcttatcca 20387942  T
Q  116 gatttatttcaatgagat-acattttcgaggacgaaaatattc--taagtgggggagaattgtaacgccctaatttattatttagttatttt 204  Q
    || || |||  ||||| | | ||||||||||||||||| ||||  ||||| ||||||| ||||||||||||| ||| ||||||| |||||||    
T  20387941 gagttgtttgcatgaggtaatattttcgaggacgaaaa-attctttaagttggggagagttgtaacgccctagttt-ttatttaattatttt 20387852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 16 - 182
Target Start/End: Complemental strand, 19112618 - 19112452
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    ||||||||||||||||||||| |||| ||||||||||   |||||| | ||| |||| ||||||| |||| | ||||| |||||||||||||| ||||||    
T  19112618 gagaggcaaggagatacctctcgtgagagtcgtttggtcgggagcgactggtaaaagcttgacgtgggagcttgagagtaagatgctggagtcttatcca 19112519  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccc 182  Q
    || || |||   |||| || ||||||||||||||||||  | ||||||||||||| |||||||||||    
T  19112518 gagttgtttgcttgaggtaaattttcgaggacgaaaatcctttaagtgggggagagttgtaacgccc 19112452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 16 - 182
Target Start/End: Original strand, 21922588 - 21922754
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    |||||||||||||||||||||||||| |||||||||||  |||||| | |||||||| || |||| |||| |  |||| ||||||||||| || ||||||    
T  21922588 gagaggcaaggagatacctcttgtgagagtcgtttgggacggagcgactggtgaaagcttaacgtgggagctaaagagtaagatgctggaatcttatcca 21922687  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccc 182  Q
    || || |||  ||||| || |||||||||||| ||||| || ||||| ||||||| |||||||||||    
T  21922688 gagttgtttgcatgaggtaaattttcgaggacaaaaatcttataagttggggagagttgtaacgccc 21922754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 20 - 182
Target Start/End: Complemental strand, 15441105 - 15440943
Alignment:
Q  20 ggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatccagatt 119  Q
    |||||||||||| | ||||| | |||||||||||  |||||| | |||||||| ||||||| |||| | || || |||||||||||||| |||||||| |    
T  15441105 ggcaaggagatatcccttgttagagtcgtttgggctggagcgactggtgaaagcttgacgtgggagcttgaaagtaagatgctggagtcttatccagagt 15441006  T
Q  120 tatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccc 182  Q
    | |||   |||| || ||||||||||||||||||||| ||||||||||||| |||||| ||||    
T  15441005 tgtttgcttgaggtaaattttcgaggacgaaaatattttaagtgggggagagttgtaatgccc 15440943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 20 - 182
Target Start/End: Complemental strand, 15533304 - 15533142
Alignment:
Q  20 ggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatccagatt 119  Q
    |||||||||||| | ||||| | |||||||||||  |||||| | |||||||| ||||||| |||| | || || |||||||||||||| |||||||| |    
T  15533304 ggcaaggagatatcccttgttagagtcgtttgggctggagcgactggtgaaagcttgacgtgggagcttgaaagtaagatgctggagtcttatccagagt 15533205  T
Q  120 tatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccc 182  Q
    | |||   |||| || ||||||||||||||||||||| ||||||||||||| |||||| ||||    
T  15533204 tgtttgcttgaggtaaattttcgaggacgaaaatattttaagtgggggagagttgtaatgccc 15533142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 20 - 170
Target Start/End: Original strand, 19485727 - 19485877
Alignment:
Q  20 ggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatccagatt 119  Q
    ||||| ||||||||||| |||| ||||||||||   |||||| | |||||||| ||||||| |||| | ||||| ||||||||||||||||||||||| |    
T  19485727 ggcaaagagatacctctcgtgagagtcgtttggtcgggagcgactggtgaaagcttgacgtgggagcttgagagtaagatgctggagtcgtatccagagt 19485826  T
Q  120 tatttcaatgagatacattttcgaggacgaaaatattctaagtgggggaga 170  Q
    | |||   |||| || |||||||||||||||||| || |||||||||||||    
T  19485827 tgtttacttgaggtaaattttcgaggacgaaaatcttttaagtgggggaga 19485877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 16 - 182
Target Start/End: Complemental strand, 19977895 - 19977729
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    ||||||||||||||||||||||||||  |||||||||   |||||| |  ||||||| ||||||| |||| | ||||| |||||| ||||||| ||||||    
T  19977895 gagaggcaaggagatacctcttgtgagggtcgtttggaacggagcgactagtgaaagcttgacgtgggagctagagagtaagatgttggagtcttatcca 19977796  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccc 182  Q
    || || |||   |||| || |||||||||||||||||| || ||||| ||||||| |||||||||||    
T  19977795 gagttgtttgcttgaggtaaattttcgaggacgaaaatcttataagttggggagagttgtaacgccc 19977729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 16 - 182
Target Start/End: Original strand, 21394718 - 21394884
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    ||||||||| |||||||||||| ||| |||||||||||  |||||| | |||||||| ||||||| |||| | ||||| |||||||||||||| ||||||    
T  21394718 gagaggcaaagagatacctcttctgagagtcgtttgggacggagcgactggtgaaagcttgacgtgggagctagagagtaagatgctggagtcttatcca 21394817  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccc 182  Q
    || || |||   | || || |||||||||||| ||||| || ||||| ||||||| |||||||||||    
T  21394818 gagttgtttgctttaggtaaattttcgaggacaaaaatcttataagttggggagagttgtaacgccc 21394884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 16 - 182
Target Start/End: Original strand, 21789211 - 21789377
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    ||||||||| |||||||||||| ||| |||||||||||  |||||| | |||||||| ||||||| |||| | ||||| |||||||||||||| ||||||    
T  21789211 gagaggcaaagagatacctcttctgagagtcgtttgggacggagcgactggtgaaagcttgacgtgggagctagagagtaagatgctggagtcttatcca 21789310  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccc 182  Q
    || || |||   | || || |||||||||||| ||||| || ||||| ||||||| |||||||||||    
T  21789311 gagttgtttgctttaggtaaattttcgaggacaaaaatcttataagttggggagagttgtaacgccc 21789377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 16 - 182
Target Start/End: Complemental strand, 32600072 - 32599906
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    |||||||||| ||||| | ||||| | | |||||||||  |||||| | |||||||| || |||| |||| | ||||| |||||||||||||| ||||||    
T  32600072 gagaggcaagtagatatcccttgttagattcgtttgggctggagcgactggtgaaagcttaacgtgggagcttgagagtaagatgctggagtcttatcca 32599973  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccc 182  Q
    || ||||||   |||| || |||||||||||||||||| || ||||||||||||| |||||||||||    
T  32599972 gagttatttgcttgaggtaaattttcgaggacgaaaatcttttaagtgggggagagttgtaacgccc 32599906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 16 - 215
Target Start/End: Original strand, 16408898 - 16409098
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    ||||||||| || ||||| ||||| | |||||||||||  |||||| | |||||||| ||||||| |||| | ||||| |||||||| ||||| ||||||    
T  16408898 gagaggcaaagaaataccccttgttagagtcgtttgggacggagcgactggtgaaagcttgacgtgggagctagagagtaagatgctcgagtcttatcca 16408997  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccctaattta-ttatttagttattttatcgagttta 214  Q
    || || |||   |||| || |||||||||||||||||| || ||||| ||||||| |||||||||||   |||| ||| ||| |||||| ||||||||||    
T  16408998 gagttgtttgcttgaggtaaattttcgaggacgaaaatcttttaagttggggagagttgtaacgcccacttttatttaattaattatttaatcgagttta 16409097  T
Q  215 g 215  Q
    |    
T  16409098 g 16409098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 16 - 114
Target Start/End: Complemental strand, 12304686 - 12304588
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcc 114  Q
    |||||| ||||||||||||||||||| ||||||||| || |||||||| |||||||||||||| | |||| ||||||| ||||||| ||||||||||||    
T  12304686 gagaggtaaggagatacctcttgtgagagtcgtttgaggtggagcggctggtgaaagtttgacttgggagctggagagtaagatgcgggagtcgtatcc 12304588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 16 - 206
Target Start/End: Complemental strand, 14565067 - 14564878
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    |||||| || |||||||||||||||| |||||||||||| |||||| | |||||||||||||| | |||| ||||||| ||||||| ||||||||||||     
T  14565067 gagaggtaaagagatacctcttgtgagagtcgtttggggtggagcgactggtgaaagtttgacttgggagctggagagtaagatgcgggagtcgtatccg 14564968  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccctaatttattatttagttattttat 206  Q
    || || |||   |||| ||   ||||||||||| ||||  | ||| | ||||||| ||||||||||||| ||  ||||||| |||||||||    
T  14564967 gagttgtttgcttgaggtaagatttcgaggacg-aaattctgtaatttggggagagttgtaacgccctagttatttatttaattattttat 14564878  T

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Target: chr8; HSP #26
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 16 - 114
Target Start/End: Original strand, 16265471 - 16265569
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcc 114  Q
    |||||| ||||||||||||||||||| |||||||||||| |||||| | |||||||||||||| | |||| ||||||| ||||||| ||||||||||||    
T  16265471 gagaggtaaggagatacctcttgtgagagtcgtttggggtggagcgactggtgaaagtttgacttgggagctggagagtaagatgcgggagtcgtatcc 16265569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 16 - 182
Target Start/End: Complemental strand, 22031960 - 22031794
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    |||||||||||||||||| ||||| | |||||||||||  |||||| | |||||||| ||||||| |||| | ||||| |||||||| ||||| ||||||    
T  22031960 gagaggcaaggagataccccttgttagagtcgtttgggctggagcgactggtgaaagcttgacgtgggagcttgagagtaagatgcttgagtcttatcca 22031861  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccc 182  Q
    || || |||   |||| || ||| |||||||||||||| || ||||| | ||||| |||||||||||    
T  22031860 gagttgtttgcttgaggtaaattatcgaggacgaaaatcttttaagttgcggagagttgtaacgccc 22031794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 16 - 114
Target Start/End: Complemental strand, 27347151 - 27347053
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcc 114  Q
    |||||| ||||||||||||||||||| |||||||||||| |||||| | |||||||||||||| | |||| ||||||| ||||||| ||||||||||||    
T  27347151 gagaggtaaggagatacctcttgtgagagtcgtttggggtggagcgactggtgaaagtttgacttgggagctggagagtaagatgcgggagtcgtatcc 27347053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 16 - 182
Target Start/End: Original strand, 30313997 - 30314163
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    |||||||||||| ||||| ||||| | |||||||||||  |||||| | |||||||| |||||||  ||| | ||||| |||||| ||||||| ||||||    
T  30313997 gagaggcaaggaaataccccttgttagagtcgtttgggctggagcgactggtgaaagcttgacgtgagagcttgagagtaagatgttggagtcttatcca 30314096  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccc 182  Q
    || || |||   | || || |||||||||||||||||| || ||||||||||||| |||||||||||    
T  30314097 gagttgtttgcttaaggtaaattttcgaggacgaaaatcttttaagtgggggagagttgtaacgccc 30314163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 16 - 114
Target Start/End: Original strand, 804529 - 804627
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcc 114  Q
    |||||| || |||||||||||||||| |||||||||||| |||||| | |||||||||||||| | |||| ||||||| ||||||| ||||||||||||    
T  804529 gagaggtaaagagatacctcttgtgagagtcgtttgggggggagcgactggtgaaagtttgacttgggagctggagagtaagatgcgggagtcgtatcc 804627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 16 - 114
Target Start/End: Complemental strand, 6603583 - 6603485
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcc 114  Q
    |||||| || |||||||||||||||| |||||||||||| |||||||| |||||||||||||| | |||| ||||||| | ||||| ||||||||||||    
T  6603583 gagaggtaaagagatacctcttgtgagagtcgtttggggtggagcggctggtgaaagtttgacttgggagctggagagtaggatgcgggagtcgtatcc 6603485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 16 - 114
Target Start/End: Complemental strand, 6679036 - 6678938
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcc 114  Q
    |||||| || |||||||||||||||| |||||||||||| |||||| | |||||||||||||| | |||| ||||||| ||||||| ||||||||||||    
T  6679036 gagaggtaaagagatacctcttgtgagagtcgtttggggtggagcgactggtgaaagtttgacttgggagctggagagtaagatgcgggagtcgtatcc 6678938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 16 - 182
Target Start/End: Original strand, 22133894 - 22134060
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    ||||||||| |||||| | ||||| |||||||||| ||  |||||| | |||||||| ||||||| |||  | ||||| ||||||||| |||| ||| ||    
T  22133894 gagaggcaaagagatatcccttgttaaagtcgtttaggctggagcgactggtgaaagcttgacgtgggaacttgagagtaagatgctgtagtcttataca 22133993  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccc 182  Q
    || || |||   |||| || |||||||||||||||||| || ||||||||||||| |||||||||||    
T  22133994 gagttgtttgcttgaggtaaattttcgaggacgaaaatcttttaagtgggggagagttgtaacgccc 22134060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 138 - 243
Target Start/End: Original strand, 21678444 - 21678548
Alignment:
Q  138 tttcgaggacgaaaatattctaagtgggggagaattgtaacgccctaatttattatttagttattttatcgagtttagtgtcattttgaataatttatgt 237  Q
    |||||||||||||| | || |||| | || ||| ||||||||||||| ||||||||||| |||||||||||||||||||||| ||||| ||||||||| |    
T  21678444 tttcgaggacgaaattcttttaagggaggtagagttgtaacgccctattttattattta-ttattttatcgagtttagtgtctttttgtataatttattt 21678542  T
Q  238 gaataa 243  Q
    ||||||    
T  21678543 gaataa 21678548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 26 - 114
Target Start/End: Original strand, 12912834 - 12912922
Alignment:
Q  26 gagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcc 114  Q
    |||||||||||||||| |||||||||||| |||||| | |||||||||||||| | |||| ||||||| ||||||| ||||||||||||    
T  12912834 gagatacctcttgtgagagtcgtttggggtggagcgactggtgaaagtttgacttgggagctggagagtaagatgcgggagtcgtatcc 12912922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 17 - 184
Target Start/End: Complemental strand, 20007777 - 20007611
Alignment:
Q  17 agaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatccag 116  Q
    ||||||||||| |||||||| ||||| || |||||||| ||||   |||||||||||||||| | |||| ||||||| ||||||| ||||||||||||||    
T  20007777 agaggcaaggatatacctctagtgaaggttgtttggggtggagtaaccggtgaaagtttgacttgggagctggagagtaagatgcaggagtcgtatccag 20007678  T
Q  117 atttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgcccta 184  Q
    | || |||   |||| ||   ||||||||||| ||||  ||||||| ||||||| ||||||| |||||    
T  20007677 agttgtttgcttgaggtaatatttcgaggacg-aaattctctaagttggggagagttgtaacacccta 20007611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 16 - 114
Target Start/End: Complemental strand, 28982282 - 28982184
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcc 114  Q
    |||||| || || ||||||||||||| |||||||||||| |||||| | |||||||||||||| | |||| ||||||| ||||||| ||||||||||||    
T  28982282 gagaggtaaagaaatacctcttgtgagagtcgtttggggtggagcgactggtgaaagtttgacttgggagctggagagtaagatgcgggagtcgtatcc 28982184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 16 - 114
Target Start/End: Complemental strand, 28987502 - 28987404
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcc 114  Q
    |||||| || || ||||||||||||| |||||||||||| |||||| | |||||||||||||| | |||| ||||||| ||||||| ||||||||||||    
T  28987502 gagaggtaaagaaatacctcttgtgagagtcgtttggggtggagcgactggtgaaagtttgacttgggagctggagagtaagatgcgggagtcgtatcc 28987404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 128 - 215
Target Start/End: Complemental strand, 3274330 - 3274243
Alignment:
Q  128 tgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccctaatttattatttagttattttatcgagtttag 215  Q
    |||| |||||||||||||||||||||  | ||||||||||||| ||||||||||||  || |||||||| ||||||||| ||||||||    
T  3274330 tgaggtacattttcgaggacgaaaattctataagtgggggagagttgtaacgccctctttaattatttaattattttatagagtttag 3274243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 43 - 170
Target Start/End: Original strand, 22165071 - 22165198
Alignment:
Q  43 agtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatccagatttatttcaatgagatacattttcg 142  Q
    |||||||||||  |||||| | |||||||| ||||||| |||| | ||||| |||||||||||||| |||||||| || |||   |||| || |||||||    
T  22165071 agtcgtttgggttggagcgactggtgaaagcttgacgtgggagcttgagagtaagatgctggagtcttatccagagttgtttgcttgaggtaaattttcg 22165170  T
Q  143 aggacgaaaatattctaagtgggggaga 170  Q
    ||||||||||| || ||||| |||||||    
T  22165171 aggacgaaaatcttttaagtcggggaga 22165198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 163 - 246
Target Start/End: Complemental strand, 23884575 - 23884492
Alignment:
Q  163 gggggagaattgtaacgccctaatttattatttagttattttatcgagtttagtgtcattttgaataatttatgtgaataattg 246  Q
    |||| ||| ||||||||||||| ||||||||||| |||||||||| ||||||||||| ||||  ||||||||| ||||||||||    
T  23884575 ggggtagagttgtaacgccctattttattatttaattattttatctagtttagtgtctttttatataatttatttgaataattg 23884492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 20 - 117
Target Start/End: Complemental strand, 22179108 - 22179011
Alignment:
Q  20 ggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatccaga 117  Q
    |||||||| ||||| ||||||| |||||||||||| |||||| | |||||||||||||| | |||| ||||||| ||||||| ||| || ||||||||    
T  22179108 ggcaaggaaataccccttgtgagagtcgtttggggcggagcgactggtgaaagtttgacttgggagctggagagtaagatgcgggattcttatccaga 22179011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 184
Target Start/End: Original strand, 21325263 - 21325430
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    |||||||||||| |||||||| ||||| || |||||||| ||||   | |||||||||||||| | |||  ||||||| ||||||| |||||||||||||    
T  21325263 gagaggcaaggatatacctctagtgaaggttgtttggggtggagtaacgggtgaaagtttgacttgggaactggagagtaagatgcgggagtcgtatcca 21325362  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgcccta 184  Q
    || || |||   |||| ||   ||||||||||| ||||  | ||||| ||||||| |||||||||||||    
T  21325363 gagttgtttgtttgaggtaagatttcgaggacg-aaattctataagttggggagagttgtaacgcccta 21325430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 17 - 184
Target Start/End: Original strand, 20010754 - 20010920
Alignment:
Q  17 agaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatccag 116  Q
    ||||||||||| |||||||| || || || |||| ||||||||   | |||||||||||||| | |||| ||||||| |||||||||||||| |||||||    
T  20010754 agaggcaaggatatacctctagtaaaggtggttttgggaggagtaactggtgaaagtttgacttgggagctggagagtaagatgctggagtcttatccag 20010853  T
Q  117 atttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgcccta 184  Q
    | || |||   |||| ||   ||||||||||| || |  ||||||| ||||||| |||||||||||||    
T  20010854 agttgtttgcttgaggtaatatttcgaggacg-aagttctctaagttggggagagttgtaacgcccta 20010920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 173 - 243
Target Start/End: Original strand, 21676133 - 21676202
Alignment:
Q  173 tgtaacgccctaatttattatttagttattttatcgagtttagtgtcattttgaataatttatgtgaataa 243  Q
    |||||||||||| ||||||||||| |||||||||| ||||||||||| ||||| ||||||||| |||||||    
T  21676133 tgtaacgccctattttattattta-ttattttatcaagtttagtgtctttttgtataatttatatgaataa 21676202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 114
Target Start/End: Original strand, 29304283 - 29304377
Alignment:
Q  20 ggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcc 114  Q
    |||||||| ||||| ||||||| |||||||||||  |||||| | |||||||||||||| | |||  ||||||| ||||||| ||||||||||||    
T  29304283 ggcaaggaaataccccttgtgagagtcgtttgggatggagcgactggtgaaagtttgacttgggaactggagagtaagatgcgggagtcgtatcc 29304377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 16 - 117
Target Start/End: Complemental strand, 19851339 - 19851238
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    |||||||||||| |||||||| ||||| || |||||||||||||   | |||||||||||||| | |||| ||||||| | ||||| |||||| ||||||    
T  19851339 gagaggcaaggatatacctctagtgaaggttgtttggggaggagtaactggtgaaagtttgacttgggagctggagagtacgatgcgggagtcttatcca 19851240  T
Q  116 ga 117  Q
    ||    
T  19851239 ga 19851238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 16 - 117
Target Start/End: Complemental strand, 19857375 - 19857274
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    |||||||||||| |||||||| ||||| || |||||||||||||   | |||||||||||||| | |||| ||||||| | ||||| |||||| ||||||    
T  19857375 gagaggcaaggatatacctctagtgaaggttgtttggggaggagtaactggtgaaagtttgacttgggagctggagagtacgatgcgggagtcttatcca 19857276  T
Q  116 ga 117  Q
    ||    
T  19857275 ga 19857274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 173 - 254
Target Start/End: Original strand, 20516644 - 20516725
Alignment:
Q  173 tgtaacgccctaatttattatttagttattttatcgagtttagtgtcattttgaataatttatgtgaataattgcgatgtgt 254  Q
    |||||||||||| ||||||||||| ||||||||||||||||||| || |||   ||||||||| |||||||| | |||||||    
T  20516644 tgtaacgccctattttattatttatttattttatcgagtttagtatcttttaatataatttatttgaataatggggatgtgt 20516725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 57 - 180
Target Start/End: Complemental strand, 23649969 - 23649846
Alignment:
Q  57 gagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatccagatttatttcaatgagatacattttcgaggacgaaaatatt 156  Q
    ||||| |||||||||  || |||| |||| | ||||| |||||||||||||| |||| ||| || |||   |||| || |||||||||||||||||| ||    
T  23649969 gagcgaccggtgaaatcttaacgtgggagctagagagtaagatgctggagtcttatctagagttgtttgcttgaggtaaattttcgaggacgaaaatctt 23649870  T
Q  157 ctaagtgggggagaattgtaacgc 180  Q
     ||||| ||||||| |||||||||    
T  23649869 ataagttggggagagttgtaacgc 23649846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 117
Target Start/End: Original strand, 31417327 - 31417428
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    |||||||||||| |||||||| |||||||| |||||||| ||||   | ||||| |||||||| | |||| | ||||| ||||||| ||||||||| |||    
T  31417327 gagaggcaaggacatacctctagtgaaagttgtttggggtggagtaactggtgagagtttgacttgggagctagagagtaagatgcgggagtcgtaccca 31417426  T
Q  116 ga 117  Q
    ||    
T  31417427 ga 31417428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 16 - 72
Target Start/End: Complemental strand, 22987129 - 22987073
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaag 72  Q
    ||||||||| ||||||||||||||||||||||||||||  |||||| | ||||||||    
T  22987129 gagaggcaaagagatacctcttgtgaaagtcgtttgggacggagcgactggtgaaag 22987073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 30 - 101
Target Start/End: Original strand, 22062249 - 22062320
Alignment:
Q  30 tacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgc 101  Q
    |||| |||||||||||||||||||  |||||| | |||||||||||||| | |||| ||||||| |||||||    
T  22062249 taccccttgtgaaagtcgtttgggacggagcgactggtgaaagtttgacttgggagctggagagtaagatgc 22062320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 89 - 216
Target Start/End: Complemental strand, 22985036 - 22984909
Alignment:
Q  89 gagagcaagatgctggagtcgtatccagatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccctaattt 188  Q
    ||||| |||||||||||||| |||||||  || |||   |||| || ||||| || ||||||||| || ||||| ||||||| |||||| |||||  ||     
T  22985036 gagagtaagatgctggagtcttatccagtgttgtttgcttgaggtaaatttttgacgacgaaaatcttataagttggggagagttgtaatgccctctttg 22984937  T
Q  189 attatttagttattttatcgagtttagt 216  Q
    |||||||| ||||||| | |||||||||    
T  22984936 attatttaattattttgttgagtttagt 22984909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 114
Target Start/End: Complemental strand, 23654855 - 23654757
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcc 114  Q
    |||||||||||| |||||||| ||||| || |||||||| ||||   | | |||||||||||| | |||| ||||||| ||||||| |||||| |||||    
T  23654855 gagaggcaaggatatacctctagtgaaggttgtttggggtggagtaactgatgaaagtttgacttgggagctggagagtaagatgcgggagtcttatcc 23654757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 161 - 215
Target Start/End: Original strand, 31721937 - 31721991
Alignment:
Q  161 gtgggggagaattgtaacgccctaatttattatttagttattttatcgagtttag 215  Q
    ||||||| ||| |||||||||||| ||||||||||| ||||||||| ||||||||    
T  31721937 gtgggggcgaactgtaacgccctattttattatttatttattttattgagtttag 31721991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 142 - 215
Target Start/End: Complemental strand, 20458425 - 20458352
Alignment:
Q  142 gaggacgaaaatattctaagtgggggagaattgtaacgccctaatttattatttagttattttatcgagtttag 215  Q
    |||||||||| | || |||| |||| ||| ||||||||||||| |||| |||||| ||||||||| ||||||||    
T  20458425 gaggacgaaattcttttaagaggggtagagttgtaacgccctattttaatatttacttattttattgagtttag 20458352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 172 - 215
Target Start/End: Original strand, 5081708 - 5081751
Alignment:
Q  172 ttgtaacgccctaatttattatttagttattttatcgagtttag 215  Q
    ||||||||||||| ||||||||||| ||||||||| ||||||||    
T  5081708 ttgtaacgccctattttattatttatttattttattgagtttag 5081751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 172 - 215
Target Start/End: Complemental strand, 22208767 - 22208724
Alignment:
Q  172 ttgtaacgccctaatttattatttagttattttatcgagtttag 215  Q
    ||||||||||||| ||||||||||| ||||||||| ||||||||    
T  22208767 ttgtaacgccctattttattatttatttattttattgagtttag 22208724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 171 - 214
Target Start/End: Complemental strand, 22485076 - 22485033
Alignment:
Q  171 attgtaacgccctaatttattatttagttattttatcgagttta 214  Q
    |||||||||||||| ||||||||||| ||||||||| |||||||    
T  22485076 attgtaacgccctattttattatttatttattttattgagttta 22485033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 215
Target Start/End: Original strand, 22257832 - 22257874
Alignment:
Q  173 tgtaacgccctaatttattatttagttattttatcgagtttag 215  Q
    |||||||||||| ||||||||||| ||||||||| ||||||||    
T  22257832 tgtaacgccctattttattatttatttattttattgagtttag 22257874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 224
Target Start/End: Complemental strand, 22345563 - 22345509
Alignment:
Q  170 aattgtaacgccctaatttattatttagttattttatcgagtttagtgtcatttt 224  Q
    ||||||||||||||| ||||||||||| |||||||||  ||||||| ||| ||||    
T  22345563 aattgtaacgccctattttattatttatttattttattaagtttagagtcttttt 22345509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 224
Target Start/End: Complemental strand, 22357223 - 22357169
Alignment:
Q  170 aattgtaacgccctaatttattatttagttattttatcgagtttagtgtcatttt 224  Q
    ||||||||||||||| ||||||||||| |||||||||  ||||||| ||| ||||    
T  22357223 aattgtaacgccctattttattatttatttattttattaagtttagagtcttttt 22357169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 215
Target Start/End: Original strand, 36731178 - 36731220
Alignment:
Q  173 tgtaacgccctaatttattatttagttattttatcgagtttag 215  Q
    |||||||||||| ||||||||||| ||||||||| ||||||||    
T  36731178 tgtaacgccctattttattatttatttattttattgagtttag 36731220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 170 - 215
Target Start/End: Complemental strand, 21400352 - 21400307
Alignment:
Q  170 aattgtaacgccctaatttattatttagttattttatcgagtttag 215  Q
    ||||||||||||||| ||||||||||| |||||||||  |||||||    
T  21400352 aattgtaacgccctattttattatttatttattttattaagtttag 21400307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 170 - 215
Target Start/End: Complemental strand, 21794845 - 21794800
Alignment:
Q  170 aattgtaacgccctaatttattatttagttattttatcgagtttag 215  Q
    ||||||||||||||| ||||||||||| |||||||||  |||||||    
T  21794845 aattgtaacgccctattttattatttatttattttattaagtttag 21794800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 175 - 215
Target Start/End: Complemental strand, 5762325 - 5762285
Alignment:
Q  175 taacgccctaatttattatttagttattttatcgagtttag 215  Q
    |||||||||| ||||||||||| ||||||||| ||||||||    
T  5762325 taacgccctattttattatttatttattttattgagtttag 5762285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 95; Significance: 2e-46; HSPs: 6)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 16 - 206
Target Start/End: Complemental strand, 111914 - 111724
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||| |||| ||||||||| || |||||||||||||| ||||||    
T  111914 gagaggcaaggagatacctcttgtgaaagtcgtttgggaaggagcggctggtgaaagtttaacgtgggagttggaaagtaagatgctggagtcttatcca 111815  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccctaatttattatttagttattttat 206  Q
    || || |||  ||||| ||||||||  |||||||||||  | ||||| ||| ||| ||||||||| ||||| ||||||||  |||||||||    
T  111814 gagttgtttgcatgaggtacattttttaggacgaaaattctataagttgggaagagttgtaacgcgctaatgtattatttgattattttat 111724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 16 - 184
Target Start/End: Original strand, 203881 - 204048
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    ||||||||||||||||||||| |||||||| ||||||||||||||  | ||||| |||||||||| |||||||||||| |||||||||||||| ||||||    
T  203881 gagaggcaaggagatacctctagtgaaagttgtttggggaggagcaactggtgagagtttgacgtgggagttggagagtaagatgctggagtcttatcca 203980  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgcccta 184  Q
    || || ||| | |||| ||  ||||||||||||||||| |  ||||| ||||||| ||||||| |||||    
T  203981 gagttgtttgattgaggtatgttttcgaggacgaaaat-tcttaagttggggagagttgtaacacccta 204048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 184
Target Start/End: Complemental strand, 117463 - 117296
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    |||||||||||| |||||||| ||||| || |||||||| ||||     ||||| |||||||| | |||| ||||||| ||||||| |||||| ||||||    
T  117463 gagaggcaaggatatacctctagtgaaggttgtttggggtggagtaattggtgagagtttgacttgggagctggagagtaagatgcgggagtcttatcca 117364  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgcccta 184  Q
    || || ||| | |||| ||   ||||||||||| ||||  ||||||| ||||||| |||||||||||||    
T  117363 gagttgtttgattgaggtaagatttcgaggacg-aaattctctaagttggggagagttgtaacgcccta 117296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 184
Target Start/End: Complemental strand, 385712 - 385545
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    |||||||||||| |||||||| ||||| || |||| |||||| |   |  ||||||||||||| | |||| ||||||| |||||||||||||| ||||||    
T  385712 gagaggcaaggatatacctctagtgaaggttgtttagggaggtgtaactagtgaaagtttgacatgggagctggagagtaagatgctggagtcttatcca 385613  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgcccta 184  Q
    || || |||   |||||||   ||||||||| | ||||  ||||||| ||||||| |||||||||||||    
T  385612 gagttgtttgcttgagataatatttcgaggatg-aaattctctaagttggggagagttgtaacgcccta 385545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 138 - 224
Target Start/End: Complemental strand, 73521 - 73435
Alignment:
Q  138 tttcgaggacgaaaatattctaagtgggggagaattgtaacgccctaatttattatttagttattttatcgagtttagtgtcatttt 224  Q
    |||| ||||||||| | || ||||||||||||| ||||||||||||| ||||||||||| ||||||| | |||||||| ||| ||||    
T  73521 tttcaaggacgaaattcttttaagtgggggagagttgtaacgccctattttattatttatttattttcttgagtttagagtcttttt 73435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #6
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 138 - 215
Target Start/End: Original strand, 319346 - 319422
Alignment:
Q  138 tttcgaggacgaaaatattctaagtgggggagaattgtaacgccctaatttattatttagttattttatcgagtttag 215  Q
    |||||||||| ||| | || |||| |||| ||| |||||||||| || ||||||||||| ||||||||| ||||||||    
T  319346 tttcgaggacaaaattcttttaag-ggggtagagttgtaacgccttattttattatttatttattttattgagtttag 319422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0877 (Bit Score: 94; Significance: 6e-46; HSPs: 1)
Name: scaffold0877
Description:

Target: scaffold0877; HSP #1
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 16 - 215
Target Start/End: Original strand, 673 - 874
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    ||||||||| |||||||||||||||||||||||||||| ||||||||| |||||||| || |||| | |||||||||| |||||||||||||| ||||||    
T  673 gagaggcaacgagatacctcttgtgaaagtcgtttgggaaggagcggctggtgaaagcttaacgtggaagttggagagtaagatgctggagtcttatcca 772  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaa-tattctaagtgggggagaattgtaacgccctaatttattattt-agttattttatcgagttt 213  Q
    || || |||  | ||| |||||||||||||||||||| | || ||||| ||||||| ||||||||||||| || ||||||| | ||||||||| ||||||    
T  773 gagttgtttgcacgaggtacattttcgaggacgaaaatttttgtaagttggggagagttgtaacgccctatttaattatttgatttattttattgagttt 872  T
Q  214 ag 215  Q
    ||    
T  873 ag 874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 94; Significance: 6e-46; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 109 - 246
Target Start/End: Complemental strand, 29157 - 29020
Alignment:
Q  109 gtatccagatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccctaatttattatttagttattttatcg 208  Q
    ||||||||| |||||| |||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| |||||||||      
T  29157 gtatccagagttattttaatgaggtacattttcgaggacgaaaatattctaagtgggggagagttgtaacgccctattttattatttatttattttatta 29058  T
Q  209 agtttagtgtcattttgaataatttatgtgaataattg 246  Q
    ||||||||||| ||||| ||||||||| ||||||||||    
T  29057 agtttagtgtctttttgtataatttatttgaataattg 29020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1832 (Bit Score: 93; Significance: 2e-45; HSPs: 1)
Name: scaffold1832
Description:

Target: scaffold1832; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 16 - 204
Target Start/End: Complemental strand, 1190 - 1002
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    ||||||||||||||||||||||||||| |||||||||||||||||| | ||||||||||| |||| |||| |||| || | |||||| ||||| ||||||    
T  1190 gagaggcaaggagatacctcttgtgaaggtcgtttggggaggagcgactggtgaaagtttaacgtgggagctggaaagtaggatgctagagtcttatcca 1091  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccctaatttattatttagttatttt 204  Q
    || || |||  ||||| ||||||||||||||||||||| || ||||| ||||||| ||||||||||||| ||  ||||||| |||||||    
T  1090 gagttgtttgcatgaggtacattttcgaggacgaaaattttataagttggggagacttgtaacgccctatttatttatttaattatttt 1002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 93; Significance: 2e-45; HSPs: 64)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 16 - 215
Target Start/End: Original strand, 19167350 - 19167549
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    |||||||||||||||||||||||||||| ||||||||||||||||| | ||||||||||| |||| ||||||||| || |||||||||||||| ||||||    
T  19167350 gagaggcaaggagatacctcttgtgaaaatcgtttggggaggagcgactggtgaaagtttaacgtgggagttggaaagtaagatgctggagtcttatcca 19167449  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccctaatttat-tatttagttattttatcgagttta 214  Q
    || ||  ||  ||||| ||||||||||||||||| ||| || ||||| ||||||| ||||||| |||| |||||| |||||| ||||||||| | |||||    
T  19167450 gagttgattgcatgaggtacattttcgaggacgacaattttataagttggggagagttgtaacaccct-atttatctatttaattattttattgggttta 19167548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 173 - 259
Target Start/End: Original strand, 3006524 - 3006610
Alignment:
Q  173 tgtaacgccctaatttattatttagttattttatcgagtttagtgtcattttgaataatttatgtgaataattgcgatgtgtgatgt 259  Q
    |||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3006524 tgtaacaccctaatttattatttagttattttatggagtttagtgtcattttgaataatttatgtgaataattgcgatgtgtgatgt 3006610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 16 - 182
Target Start/End: Original strand, 2875358 - 2875524
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    ||||||||||||||||||||| |||| ||||||||||   |||||| | |||||||| ||||||| |||| | ||||| |||||||||||||| ||||||    
T  2875358 gagaggcaaggagatacctctcgtgagagtcgtttggacgggagcgactggtgaaagcttgacgtgggagcttgagagtaagatgctggagtcttatcca 2875457  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccc 182  Q
    || || |||   |||| || |||||||||||||||||| || ||||||||||||| |||||||||||    
T  2875458 gagttgtttgcttgaggtaaattttcgaggacgaaaatcttttaagtgggggagagttgtaacgccc 2875524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 16 - 182
Target Start/End: Original strand, 24313723 - 24313889
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    ||||||||||||||||||||| |||| ||||||||||   |||||| | |||||||| ||||||| |||| | ||||| |||||||||||||| ||||||    
T  24313723 gagaggcaaggagatacctctcgtgagagtcgtttggacgggagcgactggtgaaagcttgacgtgggagcttgagagtaagatgctggagtcttatcca 24313822  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccc 182  Q
    || || |||   |||| || |||||||||||||||||| || ||||||||||||| |||||||||||    
T  24313823 gagttgtttgcttgaggtaaattttcgaggacgaaaatcttttaagtgggggagagttgtaacgccc 24313889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 16 - 179
Target Start/End: Original strand, 16550716 - 16550879
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    ||||||||||||||||||||| |||| ||||||||||   |||||| | |||||||| ||||||| |||| | ||||| |||||||||||||| ||||||    
T  16550716 gagaggcaaggagatacctctcgtgagagtcgtttggacgggagcgactggtgaaagcttgacgtgggagcttgagagtaagatgctggagtcttatcca 16550815  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacg 179  Q
    || || |||   |||| || |||||||||||||||||| || ||||||||||||| ||||||||    
T  16550816 gagttgtttgcttgaggtaaattttcgaggacgaaaatcttttaagtgggggagagttgtaacg 16550879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 16 - 179
Target Start/End: Original strand, 16627272 - 16627435
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    ||||||||||||||||||||| |||| ||||||||||   |||||| | |||||||| ||||||| |||| | ||||| |||||||||||||| ||||||    
T  16627272 gagaggcaaggagatacctctcgtgagagtcgtttggacgggagcgactggtgaaagcttgacgtgggagcttgagagtaagatgctggagtcttatcca 16627371  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacg 179  Q
    || || |||   |||| || |||||||||||||||||| || ||||||||||||| ||||||||    
T  16627372 gagttgtttgcttgaggtaaattttcgaggacgaaaatcttttaagtgggggagagttgtaacg 16627435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 26 - 204
Target Start/End: Complemental strand, 23078185 - 23078007
Alignment:
Q  26 gagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatccagatttatttc 125  Q
    |||||||||||||||||||||||||  |  |||||| | |||||||| || |||| |||||||||||| ||||||||||| || ||||| || || |||     
T  23078185 gagatacctcttgtgaaagtcgtttaagacggagcgactggtgaaagcttaacgtgggagttggagagtaagatgctggaatcttatcctgagttgtttg 23078086  T
Q  126 aatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccctaatttattatttagttatttt 204  Q
     ||||| || |||||||||||||||||| || ||||| ||||||| ||||||||||||  || |||||||| |||||||    
T  23078085 catgaggtaaattttcgaggacgaaaatcttataagttggggagagttgtaacgccctctttgattatttaattatttt 23078007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 16 - 182
Target Start/End: Original strand, 29592475 - 29592641
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    ||||||||||||||||||||| |||| ||||||||||   |||||| | |||||||| ||||||| |||| | ||||| |||||||||||||| ||||||    
T  29592475 gagaggcaaggagatacctctcgtgagagtcgtttggtcgggagcgactggtgaaagcttgacgtgggagcttgagagtaagatgctggagtcttatcca 29592574  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccc 182  Q
    || || |||   |||| || ||||||||||||||||||  | ||||||||||||| |||||||||||    
T  29592575 gagttgtttgcttgaggtaaattttcgaggacgaaaatcctttaagtgggggagagttgtaacgccc 29592641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 16 - 181
Target Start/End: Original strand, 25610416 - 25610581
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    ||||||||||||||| |||||||||| ||||||||||| ||||||||| |||||||| || |||| |||| | ||||| |||||||| ||||| ||||||    
T  25610416 gagaggcaaggagatgcctcttgtgagagtcgtttgggaaggagcggctggtgaaagcttaacgtgggagctagagagtaagatgctagagtcttatcca 25610515  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgcc 181  Q
    || || |||    ||| || |||||||||||||||||| || ||||| ||||||| ||||||||||    
T  25610516 gagttgtttgctcgaggtaaattttcgaggacgaaaatcttataagttggggagagttgtaacgcc 25610581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 19 - 183
Target Start/End: Original strand, 27331991 - 27332155
Alignment:
Q  19 aggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatccagat 118  Q
    ||||||||||||||||||||||| ||||||||||| ||||||| | |||||||| || |||| |||| | ||||| ||||||||||| || ||||||||     
T  27331991 aggcaaggagatacctcttgtgagagtcgtttgggaaggagcgactggtgaaagcttaacgtgggagctagagagtaagatgctggaatcttatccagag 27332090  T
Q  119 ttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccct 183  Q
    || |||  ||||| || ||||||||||| |||||| || |||||  |||||| ||||||||||||    
T  27332091 ttgtttgcatgaggtaaattttcgaggatgaaaatcttataagtatgggagagttgtaacgccct 27332155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 19 - 183
Target Start/End: Original strand, 27392731 - 27392895
Alignment:
Q  19 aggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatccagat 118  Q
    ||||||||||||||||||||||| ||||||||||| ||||||| | |||||||| || |||| |||| | ||||| ||||||||||| || ||||||||     
T  27392731 aggcaaggagatacctcttgtgagagtcgtttgggaaggagcgactggtgaaagcttaacgtgggagctagagagtaagatgctggaatcttatccagag 27392830  T
Q  119 ttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccct 183  Q
    || |||  ||||| || ||||||||||| |||||| || |||||  |||||| ||||||||||||    
T  27392831 ttgtttgcatgaggtaaattttcgaggatgaaaatcttataagtatgggagagttgtaacgccct 27392895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 16 - 182
Target Start/End: Original strand, 1543639 - 1543805
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    ||||||||||||||||||||| |||| ||||||||||   |||||| | |||||||| ||||||| |||| | ||||| |||||||||||||| ||||||    
T  1543639 gagaggcaaggagatacctctcgtgagagtcgtttggacgggagcgactggtgaaagcttgacgtgggagcttgagagtaagatgctggagtcctatcca 1543738  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccc 182  Q
    ||  | |||   |||| || |||||||||||||||||| || ||||| ||||||| |||||||||||    
T  1543739 gagctgtttgcttgaggtaaattttcgaggacgaaaatcttttaagttggggagagttgtaacgccc 1543805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 17 - 184
Target Start/End: Complemental strand, 1640521 - 1640353
Alignment:
Q  17 agaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatccag 116  Q
    |||||||||||||||||||| || ||| ||||||||||||||||| | |||||||||||||| | |||  ||||||| |||||||||||||| |||||||    
T  1640521 agaggcaaggagatacctctagtaaaattcgtttggggaggagcgactggtgaaagtttgacatgggaactggagagtaagatgctggagtcttatccag 1640422  T
Q  117 atttatttcaatgagat-acattttcgaggacgaaaatattctaagtgggggagaattgtaacgcccta 184  Q
    | || |||  || || | | ||||||||||||||||||  | | ||| ||||||| |||||||||||||    
T  1640421 agttgtttgcataaggtaatattttcgaggacgaaaattctttgagttggggagagttgtaacgcccta 1640353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 16 - 215
Target Start/End: Complemental strand, 28949317 - 28949118
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    |||||||||||||||| |||||||||| ||||||||| ||||||||  |||||||||||| ||||  |||   || || |||||||| ||||| ||| ||    
T  28949317 gagaggcaaggagatatctcttgtgaaggtcgtttggagaggagcgatcggtgaaagtttaacgtgagagcgagaaagtaagatgctagagtcttattca 28949218  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccctaatttattatttagttattttatcgagtttag 215  Q
    || || |||  ||||| || |||||||||||||||||| || ||||| ||||||| |||||||| | || || |||||||| |||| |||| | ||||||    
T  28949217 gagttgtttgcatgaggtatattttcgaggacgaaaattttataagttggggagagttgtaacgtcatatttaattatttaattatattattgggtttag 28949118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 20 - 182
Target Start/End: Original strand, 16963926 - 16964088
Alignment:
Q  20 ggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatccagatt 119  Q
    |||||||| ||||| ||||| | |||||||||||  |||||| | |||||||| ||||||| |||| | ||||| |||||||||||||| |||||||| |    
T  16963926 ggcaaggaaataccccttgttagagtcgtttgggctggagcgactggtgaaagcttgacgtgggagcttgagagtaagatgctggagtcttatccagagt 16964025  T
Q  120 tatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccc 182  Q
    | |||   |||| || |||||||||||||||||| || ||||| ||||||| |||||||||||    
T  16964026 tgtttgcttgaggtaaattttcgaggacgaaaatcttttaagttggggagagttgtaacgccc 16964088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 16 - 182
Target Start/End: Complemental strand, 17032288 - 17032122
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    ||||||||||||||||||||| |||| ||||||||||   |||||| |  ||||||| || |||| |||| | ||||| ||||||||||| || ||||||    
T  17032288 gagaggcaaggagatacctctcgtgagagtcgtttggacgggagcgacttgtgaaagcttaacgtgggagcttgagagtaagatgctggaatcttatcca 17032189  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccc 182  Q
    || || |||   |||| || |||||||||||||||||| || ||||||||||||| |||||||||||    
T  17032188 gagttgtttgcttgaggtaaattttcgaggacgaaaatcttttaagtgggggagagttgtaacgccc 17032122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 16 - 182
Target Start/End: Complemental strand, 27187162 - 27186996
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    ||||||||| || |||||||| |||| ||||||||||   |||||| | || ||||| ||||||| |||| | ||||| |||||||||||||||||||||    
T  27187162 gagaggcaaagatatacctctcgtgagagtcgtttggtcgggagcgactggcgaaagcttgacgtgggagcttgagagtaagatgctggagtcgtatcca 27187063  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccc 182  Q
    || || |||   | || || |||||||||||||||||| || ||||||||||||| |||||||||||    
T  27187062 gagttgtttacttaaggtaaattttcgaggacgaaaatcttttaagtgggggagagttgtaacgccc 27186996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 16 - 182
Target Start/End: Original strand, 27262078 - 27262244
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    ||||||||| || |||||||| |||| ||||||||||   |||||| | || ||||| ||||||| |||| | ||||| |||||||||||||||||||||    
T  27262078 gagaggcaaagatatacctctcgtgagagtcgtttggtcgggagcgactggcgaaagcttgacgtgggagcttgagagtaagatgctggagtcgtatcca 27262177  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccc 182  Q
    || || |||   | || || |||||||||||||||||| || ||||||||||||| |||||||||||    
T  27262178 gagttgtttacttaaggtaaattttcgaggacgaaaatcttttaagtgggggagagttgtaacgccc 27262244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 20 - 182
Target Start/End: Original strand, 28263756 - 28263918
Alignment:
Q  20 ggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatccagatt 119  Q
    ||||| ||||||||||| |||| ||||||||||   |||||| | || ||||| ||||||| |||| | ||||| ||||||||||||||||||||||| |    
T  28263756 ggcaaagagatacctctcgtgagagtcgtttggtcgggagcgactggcgaaagcttgacgtgggagcttgagagtaagatgctggagtcgtatccagagt 28263855  T
Q  120 tatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccc 182  Q
    | |||   | || || |||||||||||||||||| || ||||||||||||| |||||||||||    
T  28263856 tgtttacttaaggtaaattttcgaggacgaaaatcttttaagtgggggagagttgtaacgccc 28263918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 20 - 182
Target Start/End: Original strand, 28342505 - 28342667
Alignment:
Q  20 ggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatccagatt 119  Q
    ||||| ||||||||||| |||| ||||||||||   |||||| | || ||||| ||||||| |||| | ||||| ||||||||||||||||||||||| |    
T  28342505 ggcaaagagatacctctcgtgagagtcgtttggtcgggagcgactggcgaaagcttgacgtgggagcttgagagtaagatgctggagtcgtatccagagt 28342604  T
Q  120 tatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccc 182  Q
    | |||   | || || |||||||||||||||||| || ||||||||||||| |||||||||||    
T  28342605 tgtttacttaaggtaaattttcgaggacgaaaatcttttaagtgggggagagttgtaacgccc 28342667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 16 - 203
Target Start/End: Complemental strand, 22433723 - 22433535
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    |||||||||||||||||||||||| | |||||||||||  |||| | | |||||||| ||||||| |||| | ||||| |||||| ||||||| ||||||    
T  22433723 gagaggcaaggagatacctcttgtaagagtcgtttgggacggagagactggtgaaagcttgacgtgggagctagagagtaagatgttggagtcttatcca 22433624  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccctaattt-attatttagttattt 203  Q
     | || |||   |||| || |||||||||||||||||| || ||||| ||||||| |||||| ||||   ||| |||||||||||||||    
T  22433623 tagttgtttgcttgaggtaaattttcgaggacgaaaatcttataagttggggagagttgtaaggcccacttttaattatttagttattt 22433535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 16 - 182
Target Start/End: Complemental strand, 12497752 - 12497586
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    |||||||||||| ||||| ||||| | |||||||||||  ||||||   |||||||| || |||| |||| | ||||| |||||||||||||| |||| |    
T  12497752 gagaggcaaggaaataccccttgttagagtcgtttgggctggagcgattggtgaaagcttaacgtgggagcttgagagtaagatgctggagtcttatcta 12497653  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccc 182  Q
    || || |||   |||| || |||||||||||||||||| || ||||||||||||| |||||||||||    
T  12497652 gagttgtttgcttgaggtaaattttcgaggacgaaaatcttttaagtgggggagagttgtaacgccc 12497586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 56 - 182
Target Start/End: Complemental strand, 19864400 - 19864274
Alignment:
Q  56 ggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatccagatttatttcaatgagatacattttcgaggacgaaaatat 155  Q
    |||||| | |||||||| ||||||| |||| | ||||| |||||||||||||| |||||||| || |||  ||||| || |||||||||||||||||| |    
T  19864400 ggagcgactggtgaaagcttgacgtgggagcttgagagtaagatgctggagtcttatccagagttgtttgcatgaggtaaattttcgaggacgaaaatct 19864301  T
Q  156 tctaagtgggggagaattgtaacgccc 182  Q
    | ||||| |||||||||||||||||||    
T  19864300 tataagttggggagaattgtaacgccc 19864274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 16 - 182
Target Start/End: Original strand, 21833536 - 21833702
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    |||||||||||| ||||| ||||| | |||||||||||  |||||| | |||||||| ||||||| | || | ||||| |||||||||||||| ||||||    
T  21833536 gagaggcaaggaaataccccttgttagagtcgtttgggatggagcgactggtgaaagcttgacgtggaagctagagagtaagatgctggagtcttatcca 21833635  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccc 182  Q
    || || |||   |||| || ||| |||||||||||||| || ||||| ||||||| |||||||||||    
T  21833636 gagttgtttgcttgaggtaaattgtcgaggacgaaaatcttttaagttggggagagttgtaacgccc 21833702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 16 - 182
Target Start/End: Complemental strand, 25112278 - 25112112
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    ||||||||||||||||||||| |||| ||||||||||   |||||| | |||||||| ||||||| |||| | ||||| |||||||| | ||| ||||||    
T  25112278 gagaggcaaggagatacctctcgtgagagtcgtttggacgggagcgactggtgaaagcttgacgtgggagcttgagagtaagatgctagtgtcttatcca 25112179  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccc 182  Q
    || || |||   |||| || |||||||||||||||||| || ||||||| | ||| |||||||||||    
T  25112178 gagttgtttgcttgaggtaaattttcgaggacgaaaatcttttaagtggagaagagttgtaacgccc 25112112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 16 - 184
Target Start/End: Original strand, 8766703 - 8766870
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    |||||||||||| |||||||| ||||| || |||||||| ||||   |||||||||||||||| | |||| ||||||| ||||||| |||||||||||||    
T  8766703 gagaggcaaggatatacctctggtgaaggttgtttggggtggagtaaccggtgaaagtttgacttgggagctggagagtaagatgcgggagtcgtatcca 8766802  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgcccta 184  Q
    || || |||   |||| ||   ||||||||||| ||||  ||||||| ||||||| |||||||||||||    
T  8766803 gagttgtttgcttgaggtaagatttcgaggacg-aaattctctaagttggggagagttgtaacgcccta 8766870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 16 - 124
Target Start/End: Complemental strand, 24364138 - 24364030
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    |||||| || |||||||||||||||| |||||||||||| |||||| | |||||||||||||| | |||| ||||||| ||||||| ||||||||||||     
T  24364138 gagaggtaaagagatacctcttgtgagagtcgtttggggtggagcgactggtgaaagtttgacttgggagctggagagtaagatgcgggagtcgtatccg 24364039  T
Q  116 gatttattt 124  Q
    || ||||||    
T  24364038 gagttattt 24364030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 17 - 184
Target Start/End: Original strand, 17025861 - 17026027
Alignment:
Q  17 agaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatccag 116  Q
    ||||||||||| |||||||| ||||| || |||||||||||||   | |||||||||||||| | |||||||||||| |||||||||||||| |||||||    
T  17025861 agaggcaaggatatacctctagtgaaggttgtttggggaggagtaactggtgaaagtttgacttgggagttggagagtaagatgctggagtcttatccag 17025960  T
Q  117 atttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgcccta 184  Q
    | || |||   |||| ||   ||||||||| | ||||  ||||||| ||||||| |||||||||||||    
T  17025961 agttgtttgcttgaggtaatatttcgaggatg-aaattctctaagttggggagagttgtaacgcccta 17026027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 16 - 182
Target Start/End: Original strand, 16928195 - 16928361
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    |||||||||| | ||||| ||||| | |||||||||||  |||| | | |||||||| ||||||| |||| | ||||| |||||||||||||| ||||||    
T  16928195 gagaggcaagaaaataccccttgttagagtcgtttgggctggagtgactggtgaaagcttgacgtgggagcttgagagtaagatgctggagtcttatcca 16928294  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccc 182  Q
    || || |||   |||| || ||||||||||| |||||| || ||||| ||||||| |||||||||||    
T  16928295 gagttgtttgcttgaggtaaattttcgaggaagaaaatcttataagttggggagagttgtaacgccc 16928361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 16 - 182
Target Start/End: Original strand, 18408498 - 18408664
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    ||||||||||| |||||||||||||| |||||||||||  |||| | | |||||||| || |||| |||| | ||| | ||||||||||| || ||||||    
T  18408498 gagaggcaaggcgatacctcttgtgagagtcgtttgggacggagtgactggtgaaagcttaacgtgggagctagagtgtaagatgctggaatcttatcca 18408597  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccc 182  Q
    || || |||   |||| || |||||||||||||||||| || |||||  |||||| |||||||||||    
T  18408598 gagttgtttgcttgaggtaaattttcgaggacgaaaatcttataagttagggagagttgtaacgccc 18408664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 172 - 253
Target Start/End: Complemental strand, 18459669 - 18459588
Alignment:
Q  172 ttgtaacgccctaatttattatttagttattttatcgagtttagtgtcattttgaataatttatgtgaataattgcgatgtg 253  Q
    ||||||||||||| ||||||||||| ||| |||||||||||||||||| ||||| ||||||||| |||||||||| ||||||    
T  18459669 ttgtaacgccctattttattatttatttactttatcgagtttagtgtctttttgtataatttatttgaataattgtgatgtg 18459588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 16 - 184
Target Start/End: Complemental strand, 21471327 - 21471160
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    |||||||||||| |||||||| ||||| || |||||||||||||   | |||||||||||||| | |||| ||||||| |||||||||||||| ||||||    
T  21471327 gagaggcaaggatatacctctagtgaaggttgtttggggaggagtaactggtgaaagtttgacatgggagctggagagtaagatgctggagtcttatcca 21471228  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgcccta 184  Q
    || || |||   |||| ||   ||||||||||| ||||  ||||||| ||||||| ||||||| |||||    
T  21471227 gagttgtttgcttgaggtaatatttcgaggacg-aaattctctaagttggggagagttgtaacacccta 21471160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 26 - 117
Target Start/End: Complemental strand, 18794406 - 18794315
Alignment:
Q  26 gagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatccaga 117  Q
    |||||||||||||||| |||||||||||| |||||| | ||||||||||| || |||||||||||||| ||||||| | ||||||| |||||    
T  18794406 gagatacctcttgtgagagtcgtttggggtggagcgactggtgaaagtttaacttaggagttggagagtaagatgcggcagtcgtacccaga 18794315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 16 - 170
Target Start/End: Original strand, 12511149 - 12511303
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    |||||||||||| ||||| ||||| | |||||||||||  ||||||   |||||||| || |||| |||| | ||||| |||||||||||||| |||| |    
T  12511149 gagaggcaaggaaataccccttgttagagtcgtttgggctggagcgattggtgaaagcttaacgtgggagcttgagagtaagatgctggagtcttatcta 12511248  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggaga 170  Q
    || || |||   |||| || |||||||||||||||||| || |||||||||||||    
T  12511249 gagttgtttgcttgaggtaaattttcgaggacgaaaatcttttaagtgggggaga 12511303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 138 - 254
Target Start/End: Complemental strand, 1816965 - 1816849
Alignment:
Q  138 tttcgaggacgaaaatattctaagtgggggagaattgtaacgccctaatttattatttagttattttatcgagtttagtgtcattttgaataatttatgt 237  Q
    |||||||||| ||| | || |||| | || ||| |||||||||| || ||||||||||| |||||||||||||||||||||| ||||| ||||||||| |    
T  1816965 tttcgaggacaaaattcttttaagggaggtagagttgtaacgccttattttattatttatttattttatcgagtttagtgtctttttgtataatttattt 1816866  T
Q  238 gaataattgcgatgtgt 254  Q
     |||||| | |||||||    
T  1816865 taataatggggatgtgt 1816849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 17 - 184
Target Start/End: Complemental strand, 18787613 - 18787447
Alignment:
Q  17 agaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatccag 116  Q
    ||||||||||| |||||||| ||||| || |||||||| ||||   |||||| ||||||||| | |||| | || || ||||||| ||||||||||||||    
T  18787613 agaggcaaggatatacctctagtgaaggttgtttggggtggagtaaccggtgcaagtttgacttgggagctagaaagtaagatgcgggagtcgtatccag 18787514  T
Q  117 atttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgcccta 184  Q
    | ||||||   |||| ||   ||||||||||| ||||  ||||||| ||||||| |||||||||||||    
T  18787513 agttatttgtttgaggtaatatttcgaggacg-aaattctctaagttggggagagttgtaacgcccta 18787447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 75 - 182
Target Start/End: Complemental strand, 18932479 - 18932372
Alignment:
Q  75 tgacgtaggagttggagagcaagatgctggagtcgtatccagatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattg 174  Q
    |||||| |||| | ||||| |||||||||||||| |||||||| || |||   |||| || |||||||||||||||||| || ||||||||||||| |||    
T  18932479 tgacgtgggagcttgagagtaagatgctggagtcttatccagagttgtttgcttgaggtaaattttcgaggacgaaaatcttttaagtgggggagagttg 18932380  T
Q  175 taacgccc 182  Q
    ||||||||    
T  18932379 taacgccc 18932372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 183
Target Start/End: Original strand, 22079213 - 22079380
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    ||||||||| |||||||||||||||| |||||||||||  |||||| | |||||||| || |||| |||| | || || |||||  || | || ||||||    
T  22079213 gagaggcaaagagatacctcttgtgagagtcgtttgggacggagcgactggtgaaagcttaacgtgggagctagaaagtaagatattgaaatcttatcca 22079312  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccct 183  Q
     | || |||  || || || |||||||||||||||||| || ||||| ||||||| ||||||||||||    
T  22079313 aagttgtttgcataaggtaaattttcgaggacgaaaatcttataagttggggagagttgtaacgccct 22079380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 16 - 117
Target Start/End: Original strand, 21564687 - 21564788
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    |||||| || |||||||||||||||| |||||||||||  |||||| | |||||||||||||| | |||| |||| || ||||||| |||||| ||||||    
T  21564687 gagaggtaaagagatacctcttgtgagagtcgtttgggatggagcgactggtgaaagtttgacttgggagctggaaagtaagatgcgggagtcttatcca 21564786  T
Q  116 ga 117  Q
    ||    
T  21564787 ga 21564788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 20 - 117
Target Start/End: Original strand, 28292931 - 28293028
Alignment:
Q  20 ggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatccaga 117  Q
    ||||||||||||||||| |||| ||||||||||   |||||| | || ||||| ||||||| |||| | ||||| |||||||||||||||||||||||    
T  28292931 ggcaaggagatacctctcgtgagagtcgtttggtcgggagcgactggcgaaagcttgacgtgggagcttgagagtaagatgctggagtcgtatccaga 28293028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 173 - 246
Target Start/End: Complemental strand, 31166630 - 31166557
Alignment:
Q  173 tgtaacgccctaatttattatttagttattttatcgagtttagtgtcattttgaataatttatgtgaataattg 246  Q
    |||||| ||||| ||||||||||| |||||||||||||||||||||| ||||| ||||||||  ||||||||||    
T  31166630 tgtaacaccctattttattatttatttattttatcgagtttagtgtctttttgtataatttaattgaataattg 31166557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 184
Target Start/End: Original strand, 11288153 - 11288320
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    |||||||||||||||||||||||| | ||| |||||||| |||||  | ||||||||| | || | |||||||||||| |||||||  |||||||| ||     
T  11288153 gagaggcaaggagatacctcttgtaagagttgtttggggtggagcaactggtgaaagtctaacttgggagttggagagtaagatgcaagagtcgtaccct 11288252  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgcccta 184  Q
    || || |||   |||| ||   ||||||||||| ||||  ||||||| ||||||| |||||||||||||    
T  11288253 gagttgtttgtttgaggtaagatttcgaggacg-aaatcctctaagttggggagagttgtaacgcccta 11288320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 16 - 111
Target Start/End: Original strand, 10469404 - 10469498
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgta 111  Q
    |||||| ||||||||||||||||||| |||||| ||||| ||| || | |||||||||||||| | |||| ||||||| ||||||| |||||||||    
T  10469404 gagaggtaaggagatacctcttgtgagagtcgtctggggtgga-cgactggtgaaagtttgacttgggagctggagagtaagatgcgggagtcgta 10469498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 17 - 184
Target Start/End: Complemental strand, 25750534 - 25750368
Alignment:
Q  17 agaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatccag 116  Q
    ||||||||||| |||||||| ||||| ||  |||| |||||||   | |||||||||||||| | |||| ||| ||| ||||||||||||||||||| ||    
T  25750534 agaggcaaggatatacctctagtgaaggttttttgaggaggagtaactggtgaaagtttgacttgggagctggggagtaagatgctggagtcgtatcaag 25750435  T
Q  117 atttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgcccta 184  Q
    | || |||   |||| ||   |||||||||| |||||  ||||||| ||||||| |||||||||||||    
T  25750434 agttgtttgcttgaggtaatatttcgaggac-aaaattctctaagttggggagagttgtaacgcccta 25750368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 16 - 182
Target Start/End: Original strand, 14131734 - 14131899
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    ||||||||||||||||||||| |||| ||| |||||||| ||||   | ||||||||| |||| | |||| |||| || ||||||  |||||| ||||||    
T  14131734 gagaggcaaggagatacctctagtgagagttgtttggggtggagaaactggtgaaagtctgacttgggagctggaaagtaagatgtgggagtcttatcca 14131833  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccc 182  Q
    || || |||   |||| ||   ||||||||||||||||  ||||||| ||||||| |||||||||||    
T  14131834 gagttgtttacttgaggtaatatttcgaggacgaaaat-ctctaagttggggagagttgtaacgccc 14131899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 16 - 182
Target Start/End: Original strand, 18198088 - 18198254
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    |||||||||||||||||||||  ||||||| |||||||  |||||| | |||||||| || | || |||| | ||||| |||||||||| ||| ||||||    
T  18198088 gagaggcaaggagatacctctaatgaaagttgtttgggacggagcgactggtgaaagcttaatgttggagctagagagtaagatgctggtgtcttatcca 18198187  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccc 182  Q
    || || |||    ||| || ||||| || ||||||||| || ||||| ||| ||| |||||||||||    
T  18198188 gagttgtttgtgcgaggtaaatttttgaagacgaaaatcttataagttgggtagagttgtaacgccc 18198254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 16 - 105
Target Start/End: Original strand, 5839774 - 5839863
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctgga 105  Q
    ||||||||||||||||||||| |||| ||||||||||   |||||| | |||||||| ||||||| |||| | ||||| |||||||||||    
T  5839774 gagaggcaaggagatacctctcgtgagagtcgtttggacgggagcgactggtgaaagcttgacgtgggagcttgagagtaagatgctgga 5839863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 17 - 182
Target Start/End: Original strand, 22763011 - 22763175
Alignment:
Q  17 agaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatccag 116  Q
    |||||||| |||||||||||||||| |||||||||||   ||||| |  ||||||| || | || |||| | ||||| ||||||||| | || ||||||     
T  22763011 agaggcaaagagatacctcttgtgagagtcgtttgggacagagcgacttgtgaaagcttaatgtgggagctagagagtaagatgctgaa-tcttatccat 22763109  T
Q  117 atttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccc 182  Q
    | || |||   |||| || |||||||||||||||||| || ||||| ||||||| |||||||||||    
T  22763110 agttgtttgcttgaggtaaattttcgaggacgaaaatcttataagttggggagagttgtaacgccc 22763175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 16 - 177
Target Start/End: Original strand, 25765844 - 25766005
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    |||||||||||| ||||| ||||| | |||||||||||  |||||| | |||||||| || | || |||| | ||||| |||||||||||||| |||| |    
T  25765844 gagaggcaaggaaataccccttgttagagtcgtttgggctggagcgactggtgaaagctttatgtgggagcttgagagtaagatgctggagtcttatcta 25765943  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaa 177  Q
    || || |||   |||| || | ||| |||||||||||| || ||||| ||||||| ||||||    
T  25765944 gagttgtttgcttgaggtaaacttttgaggacgaaaatcttttaagttggggagagttgtaa 25766005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 89 - 183
Target Start/End: Complemental strand, 20595138 - 20595044
Alignment:
Q  89 gagagcaagatgctggagtcgtatccagatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccct 183  Q
    ||||| ||||||||||| || |||||||| || |||   |||| || |||||||||||||||||| || ||||| ||||||| ||||||||||||    
T  20595138 gagagtaagatgctggaatcttatccagagttgtttgcttgaggtaaattttcgaggacgaaaatcttataagttggggagagttgtaacgccct 20595044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 89 - 182
Target Start/End: Original strand, 1537625 - 1537718
Alignment:
Q  89 gagagcaagatgctggagtcgtatccagatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccc 182  Q
    ||||| |||||||||||||| ||||||||  | |||   |||| || |||||||||||||||||| || ||||| ||||||| |||||||||||    
T  1537625 gagagtaagatgctggagtcctatccagagctgtttgcttgaggtaaattttcgaggacgaaaatcttttaagttggggagagttgtaacgccc 1537718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 179 - 244
Target Start/End: Complemental strand, 1819386 - 1819321
Alignment:
Q  179 gccctaatttattatttagttattttatcgagtttagtgtcattttgaataatttatgtgaataat 244  Q
    |||||| ||||||||||| || ||||||| ||||||||||| ||||| ||||||||| ||||||||    
T  1819386 gccctattttattatttatttgttttatcaagtttagtgtctttttgtataatttatttgaataat 1819321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 138 - 215
Target Start/End: Original strand, 21681575 - 21681652
Alignment:
Q  138 tttcgaggacgaaaatattctaagtgggggagaattgtaacgccctaatttattatttagttattttatcgagtttag 215  Q
    |||||||||||||| | || |||| || | ||| ||||||||||||| ||||||||||| ||||||||| ||||||||    
T  21681575 tttcgaggacgaaattcttttaaggggagtagagttgtaacgccctattttattatttatttattttattgagtttag 21681652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 138 - 214
Target Start/End: Original strand, 23018346 - 23018422
Alignment:
Q  138 tttcgaggacgaaaatattctaagtgggggagaattgtaacgccctaatttattatttagttattttatcgagttta 214  Q
    |||||||||||||| | || |||| |||| ||| ||||||||||||| |||| |||||| ||||||||| |||||||    
T  23018346 tttcgaggacgaaattcttttaaggggggtagagttgtaacgccctattttaatatttatttattttattgagttta 23018422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 172 - 215
Target Start/End: Original strand, 21676784 - 21676827
Alignment:
Q  172 ttgtaacgccctaatttattatttagttattttatcgagtttag 215  Q
    ||||||||||||||||||||||||| ||||||||| ||||||||    
T  21676784 ttgtaacgccctaatttattatttatttattttattgagtttag 21676827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 184
Target Start/End: Complemental strand, 19879024 - 19878857
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    |||||| || |||||||||||||| | ||| |||||||| |||||  | ||||||||| | || | |||||||||||| |||||||  |||||||| ||     
T  19879024 gagaggtaaagagatacctcttgtaagagttgtttggggtggagcaactggtgaaagtctaacttgggagttggagagtaagatgcaagagtcgtacccc 19878925  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgcccta 184  Q
    || || |||   |||| ||   ||||||||||| ||||  ||||||| ||||||| ||||| |||||||    
T  19878924 gagttgtttgtttgaggtaagatttcgaggacg-aaatcctctaagttggggagagttgtatcgcccta 19878857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 171 - 215
Target Start/End: Complemental strand, 23658612 - 23658568
Alignment:
Q  171 attgtaacgccctaatttattatttagttattttatcgagtttag 215  Q
    |||||||||||||| ||||||||||| ||||||||| ||||||||    
T  23658612 attgtaacgccctattttattatttatttattttattgagtttag 23658568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 215
Target Start/End: Original strand, 25959071 - 25959159
Alignment:
Q  127 atgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccctaatttattatttagttattttatcgagtttag 215  Q
    ||||| || ||||||||||||||||||  | |||  |||||||| ||||||||||||  || |||||||| |||||||||  |||||||    
T  25959071 atgaggtaaattttcgaggacgaaaattctataaaagggggagagttgtaacgccctctttaattatttaattattttattaagtttag 25959159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 172 - 215
Target Start/End: Original strand, 19650571 - 19650614
Alignment:
Q  172 ttgtaacgccctaatttattatttagttattttatcgagtttag 215  Q
    ||||||||||||| ||||||||||| ||||||||| ||||||||    
T  19650571 ttgtaacgccctattttattatttatttattttattgagtttag 19650614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 234
Target Start/End: Complemental strand, 10446551 - 10446489
Alignment:
Q  172 ttgtaacgccctaatttattatttagttattttatcgagtttagtgtcattttgaataattta 234  Q
    |||||||| |||| ||||||||||| ||||||||| |||||||| ||| ||||  ||||||||    
T  10446551 ttgtaacgtcctattttattatttatttattttattgagtttagagtctttttttataattta 10446489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 195
Target Start/End: Complemental strand, 18659876 - 18659814
Alignment:
Q  133 tacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccctaatttattattt 195  Q
    |||||||||||||||||||||  | ||||| ||||||| ||||||||| ||| || |||||||    
T  18659876 tacattttcgaggacgaaaattctataagttggggagagttgtaacgcactatttaattattt 18659814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 215
Target Start/End: Original strand, 20408758 - 20408800
Alignment:
Q  173 tgtaacgccctaatttattatttagttattttatcgagtttag 215  Q
    |||||||||||| ||||||||||| ||||||||| ||||||||    
T  20408758 tgtaacgccctattttattatttatttattttattgagtttag 20408800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 173 - 214
Target Start/End: Original strand, 15890131 - 15890172
Alignment:
Q  173 tgtaacgccctaatttattatttagttattttatcgagttta 214  Q
    |||||||||||| ||||||||||| ||||||||| |||||||    
T  15890131 tgtaacgccctattttattatttatttattttattgagttta 15890172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 136 - 188
Target Start/End: Original strand, 19566252 - 19566304
Alignment:
Q  136 attttcgaggacgaaaatattctaagtgggggagaattgtaacgccctaattt 188  Q
    ||||||||||||||||||  | ||||||||||||| ||||||| ||| |||||    
T  19566252 attttcgaggacgaaaattctttaagtgggggagagttgtaacaccccaattt 19566304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0411 (Bit Score: 92; Significance: 9e-45; HSPs: 1)
Name: scaffold0411
Description:

Target: scaffold0411; HSP #1
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 16 - 215
Target Start/End: Original strand, 15492 - 15691
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||  | ||||||||||| |||| ||||||||| || |||||||||||||| ||||||    
T  15492 gagaggcaaggagatacctcttgtaaaagtcgtttgggaaggagcaactggtgaaagtttaacgtgggagttggaaagtaagatgctggagtcttatcca 15591  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccctaatttattatttagttattttatcgagtttag 215  Q
    || || |||  ||||| |||||||||||||||||||||  | ||||| || |||| |||||| |||||| || |||||||| ||||||||| | ||||||    
T  15592 gagttgtttgcatgaggtacattttcgaggacgaaaattctataagttggagagagttgtaatgccctatttaattatttaattattttattgggtttag 15691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 92; Significance: 9e-45; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 16 - 215
Target Start/End: Original strand, 117318 - 117517
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    |||||||||||||||||||||||||||||||||||| |||||||||   ||||||||||| ||||| |||||||| || |||||||||||||| ||||||    
T  117318 gagaggcaaggagatacctcttgtgaaagtcgtttgaggaggagcgattggtgaaagtttaacgtaagagttggaaagtaagatgctggagtcttatcca 117417  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccctaatttattatttagttattttatcgagtttag 215  Q
    || || |||  ||||| ||||||||||||||| ||||  || ||| | ||||||| ||||||||||||| ||  ||||||| ||||||||| | ||||||    
T  117418 gagttgtttgcatgaggtacattttcgaggacaaaaagtttataaattggggagagttgtaacgccctatttatttatttaattattttattgggtttag 117517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 85; Significance: 1e-40; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 16 - 215
Target Start/End: Original strand, 26132 - 26331
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    ||||| ||||||||||||||||||||| ||| |||||||||||| | | ||||||||||| || | ||||||||| || |||||| ||||||| ||||||    
T  26132 gagagacaaggagatacctcttgtgaaggtcatttggggaggagggactggtgaaagtttaacatgggagttggaaagtaagatgttggagtcttatcca 26231  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccctaatttat-tatttagttattttatcgagttta 214  Q
    || || |||  ||||| ||||||||||||||||||||| || ||||| ||||||| |||||||||||| |||||| |||||| ||||||||| | |||||    
T  26232 gagttgtttgcatgaggtacattttcgaggacgaaaattttataagttggggagagttgtaacgccct-atttatctatttaattattttattgggttta 26330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 84; Significance: 6e-40; HSPs: 4)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 16 - 215
Target Start/End: Original strand, 165122 - 165321
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    ||||||||| ||||||| |||||||||||||||||||| ||||||||| |||||||| || | || |||| | ||||| |||||||||||||| ||||||    
T  165122 gagaggcaaagagatacgtcttgtgaaagtcgtttgggaaggagcggctggtgaaagcttaatgtgggagctagagagtaagatgctggagtcttatcca 165221  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccctaatttattatttagttattttatcgagtttag 215  Q
    || || |||  ||||| |||||||||||||||||||||  | ||||| ||||||| ||||||||||||  || |||||||  ||||||| | ||||||||    
T  165222 gagttgtttgcatgaggtacattttcgaggacgaaaattctataagttggggagagttgtaacgccctctttgattatttgattattttgttgagtttag 165321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 16 - 182
Target Start/End: Complemental strand, 308552 - 308386
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    ||||||||||||||||||||| |||| ||||||||||   |||||| | |||||||| ||||||| |||| | ||||| |||||||||||||| ||||||    
T  308552 gagaggcaaggagatacctctcgtgagagtcgtttggacgggagcgactggtgaaagcttgacgtgggagcttgagagtaagatgctggagtcttatcca 308453  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccc 182  Q
    || || |||   |||| || |||||||||||||||||| || ||||||||||||| |||||||||||    
T  308452 gagttgtttgcttgaggtaaattttcgaggacgaaaatcttttaagtgggggagagttgtaacgccc 308386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 102
Target Start/End: Original strand, 279243 - 279329
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgct 102  Q
    |||||||||||| ||||| |||||||||||||||||||    |||| | |||||||| ||||||| |||| | ||||| ||||||||    
T  279243 gagaggcaaggaaataccccttgtgaaagtcgtttgggacaaagcgactggtgaaagcttgacgtgggagcttgagagtaagatgct 279329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 114
Target Start/End: Complemental strand, 260197 - 260103
Alignment:
Q  20 ggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcc 114  Q
    |||||||| ||||| ||||||| |||||||||||  |||||| | |||||||| ||||| | |||| |||| || ||||||| ||| || |||||    
T  260197 ggcaaggaaataccccttgtgagagtcgtttgggacggagcgactggtgaaagcttgacttgggagctggaaagtaagatgcgggattcatatcc 260103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 84; Significance: 6e-40; HSPs: 57)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 16 - 215
Target Start/End: Complemental strand, 14652170 - 14651971
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    ||||||||| ||||||| |||||||||||||||||||| ||||||||| |||||||| || | || |||| | ||||| |||||||||||||| ||||||    
T  14652170 gagaggcaaagagatacgtcttgtgaaagtcgtttgggaaggagcggctggtgaaagcttaatgtgggagctagagagtaagatgctggagtcttatcca 14652071  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccctaatttattatttagttattttatcgagtttag 215  Q
    || || |||  ||||| |||||||||||||||||||||  | ||||| ||||||| ||||||||||||  || |||||||  ||||||| | ||||||||    
T  14652070 gagttgtttgcatgaggtacattttcgaggacgaaaattctataagttggggagagttgtaacgccctctttgattatttgattattttgttgagtttag 14651971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 16 - 182
Target Start/End: Complemental strand, 8386274 - 8386108
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    ||||||||||||||||||||| |||| ||||||||||   |||||| | |||||||| ||||||| |||| | ||||| |||||||||||||| ||||||    
T  8386274 gagaggcaaggagatacctctcgtgagagtcgtttggtcgggagcgactggtgaaagcttgacgtgggagcttgagagtaagatgctggagtcttatcca 8386175  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccc 182  Q
    || || |||   |||| || |||||||||||||||||| || ||||||||||||| |||||||||||    
T  8386174 gagttgtttgcttgaggtaaattttcgaggacgaaaatcttttaagtgggggagagttgtaacgccc 8386108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 16 - 182
Target Start/End: Original strand, 14304127 - 14304293
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    ||||||||||||||||||||| |||| ||||||||||   |||||| | |||||||| ||||||| |||| | ||||| |||||||||||||| ||||||    
T  14304127 gagaggcaaggagatacctctcgtgagagtcgtttggacgggagcgactggtgaaagcttgacgtgggagcttgagagtaagatgctggagtcttatcca 14304226  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccc 182  Q
    || || |||   |||| || |||||||||||||||||| || ||||||||||||| |||||||||||    
T  14304227 gagttgtttgcttgaggtaaattttcgaggacgaaaatcttttaagtgggggagagttgtaacgccc 14304293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 16 - 182
Target Start/End: Complemental strand, 23955609 - 23955443
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    ||||||||||||||||||||| |||| ||||||||||   |||||| | |||||||| ||||||| |||| | ||||| |||||||||||||| ||||||    
T  23955609 gagaggcaaggagatacctctcgtgagagtcgtttggacgggagcgactggtgaaagcttgacgtgggagcttgagagtaagatgctggagtcttatcca 23955510  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccc 182  Q
    || || |||   |||| || |||||||||||||||||| || ||||||||||||| |||||||||||    
T  23955509 gagttgtttgcttgaggtaaattttcgaggacgaaaatcttttaagtgggggagagttgtaacgccc 23955443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 16 - 182
Target Start/End: Complemental strand, 27711198 - 27711032
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    ||||||||||||||||||||| |||| ||||||||||   |||||| | |||||||| ||||||| |||| | ||||| |||||||||||||| ||||||    
T  27711198 gagaggcaaggagatacctctcgtgagagtcgtttggtcgggagcgactggtgaaagcttgacgtgggagcttgagagtaagatgctggagtcttatcca 27711099  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccc 182  Q
    || || |||   |||| || |||||||||||||||||| || ||||||||||||| |||||||||||    
T  27711098 gagttgtttacttgaggtaaattttcgaggacgaaaatcttttaagtgggggagagttgtaacgccc 27711032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 16 - 182
Target Start/End: Original strand, 8053773 - 8053939
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    ||||||||||||||||||||| |||| ||||||||||   |||||| | |||||||| ||||||| |||  | ||||| |||||||||||||| ||||||    
T  8053773 gagaggcaaggagatacctctcgtgagagtcgtttggacgggagcgactggtgaaagcttgacgtgggaacttgagagtaagatgctggagtcttatcca 8053872  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccc 182  Q
    || || |||   |||| || |||||||||||||||||| || ||||||||||||| |||||||||||    
T  8053873 gagttgtttgcttgaggtaaattttcgaggacgaaaatcttttaagtgggggagagttgtaacgccc 8053939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 16 - 182
Target Start/End: Complemental strand, 15364248 - 15364082
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    ||||||||||||||||||||  |||| ||||||||||   |||||| | |||||||| ||||||| |||| | ||||| |||||||||||||| ||||||    
T  15364248 gagaggcaaggagatacctcacgtgagagtcgtttggtcgggagcgactggtgaaagcttgacgtgggagcttgagagtaagatgctggagtcttatcca 15364149  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccc 182  Q
    || || |||   |||| || |||||||||||||||||| || ||||||||||||| |||||||||||    
T  15364148 gagttgtttgcttgaggtaaattttcgaggacgaaaatcttttaagtgggggagagttgtaacgccc 15364082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 16 - 182
Target Start/End: Complemental strand, 18297067 - 18296901
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    ||||||||||||||||||||| |||| ||||||||||   |||||| | |||||||| ||||||| |||| | ||||| |||||||||||||| ||||||    
T  18297067 gagaggcaaggagatacctctcgtgagagtcgtttggtcgggagcgactggtgaaagcttgacgtgggagcttgagagtaagatgctggagtcttatcca 18296968  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccc 182  Q
    || || |||   |||| || ||||||||||||||||||  | ||||||||||||| |||||||||||    
T  18296967 gagttgtttgcttgaggtaaattttcgaggacgaaaatcctttaagtgggggagagttgtaacgccc 18296901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 16 - 182
Target Start/End: Original strand, 19778943 - 19779109
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    ||||||||||||||||||||| |||| ||||||||||   |||||| | |||||||| ||||||| |||| | ||||| |||||||||||||| ||||||    
T  19778943 gagaggcaaggagatacctctcgtgagagtcgtttggtcgggagcgactggtgaaagcttgacgtgggagcttgagagtaagatgctggagtcttatcca 19779042  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccc 182  Q
    || || |||   |||| || ||||||||||| |||||| || ||||||||||||| |||||||||||    
T  19779043 gagttgtttacttgaggtaaattttcgaggatgaaaatcttttaagtgggggagagttgtaacgccc 19779109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 16 - 182
Target Start/End: Original strand, 29039554 - 29039720
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    ||||||||||||||||||||| |||| ||||||||||   |||||| | |||||||| ||||||| |||| | ||||| |||||||||||||| ||||||    
T  29039554 gagaggcaaggagatacctctcgtgagagtcgtttggtcgggagcgactggtgaaagcttgacgtgggagcttgagagtaagatgctggagtcttatcca 29039653  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccc 182  Q
    || || |||   |||| || ||||||||||||||||||  | ||||||||||||| |||||||||||    
T  29039654 gagttgtttgcttgaggtaaattttcgaggacgaaaatcctttaagtgggggagagttgtaacgccc 29039720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 16 - 182
Target Start/End: Complemental strand, 40472902 - 40472736
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    ||||||||||||||||||||| |||| ||||||||||   |||||| | |||||||| ||||||| |||| | ||||| || ||||||||||| ||||||    
T  40472902 gagaggcaaggagatacctctcgtgagagtcgtttggacgggagcgactggtgaaagcttgacgtgggagcttgagagtaaaatgctggagtcttatcca 40472803  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccc 182  Q
    || || |||   |||| || |||||||||||||||||| || ||||||||||||| |||||||||||    
T  40472802 gagttgtttgcttgaggtaaattttcgaggacgaaaatcttttaagtgggggagagttgtaacgccc 40472736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 180 - 259
Target Start/End: Original strand, 14353455 - 14353535
Alignment:
Q  180 ccctaatttattatttagttatttt-atcgagtttagtgtcattttgaataatttatgtgaataattgcgatgtgtgatgt 259  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  14353455 ccctaatttattatttagttatttttatcgagtttagtgtcattttgaacaatttatgtgaataattgcgatgtgtgatgt 14353535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 16 - 204
Target Start/End: Original strand, 14851516 - 14851704
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    ||||||||| ||||||||||||||||||||||||||||  |||||||| ||||||||  | |||| ||| || ||||| |||||||||||||| ||||||    
T  14851516 gagaggcaaagagatacctcttgtgaaagtcgtttgggacggagcggctggtgaaagcctaacgtgggaattagagagtaagatgctggagtcttatcca 14851615  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccctaatttattatttagttatttt 204  Q
    || || |||  ||||| || ||||||||||||||||||    |||||  |||||| ||||||| ||||| || |||||||  |||||||    
T  14851616 gagttgtttgcatgaggtaaattttcgaggacgaaaattcaataagttcgggagagttgtaacaccctatttaattatttgattatttt 14851704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 17 - 205
Target Start/End: Original strand, 15415390 - 15415576
Alignment:
Q  17 agaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatccag 116  Q
    |||||||||||||||||||| |||||||| ||||||||||||||  | |||||||||||||| | |||| ||||||| |||||||||||||| ||||||     
T  15415390 agaggcaaggagatacctctagtgaaagttgtttggggaggagcatctggtgaaagtttgacatgggagctggagagtaagatgctggagtcttatccaa 15415489  T
Q  117 atttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccctaatttattatttagttatttta 205  Q
    | || |||   |||| ||   ||||||||||| ||||  ||||||| ||||||| |||||||||||| |||| ||||||| ||||||||    
T  15415490 agttgtttgcttgaggtaatatttcgaggacg-aaattctctaagttggggagagttgtaacgccct-atttgttatttaattatttta 15415576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 16 - 183
Target Start/End: Original strand, 14927409 - 14927576
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    ||||||||| |||||||||||||||| ||||||||||| ||||||| | |||||||| || |||| |||| | ||||| |||||||| || || ||||||    
T  14927409 gagaggcaaagagatacctcttgtgagagtcgtttgggaaggagcgactggtgaaagcttaacgtgggagctagagagtaagatgctagaatcttatcca 14927508  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccct 183  Q
    || || |||  ||||| || |||| ||||||||||||| || ||||| ||||||| ||||||||||||    
T  14927509 gagttgtttgcatgaggtaaatttccgaggacgaaaatcttataagttggggagagttgtaacgccct 14927576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 16 - 182
Target Start/End: Complemental strand, 12476462 - 12476296
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    ||||||||||||||||||||| |||| ||||||||||   |||||| | |||||||| ||||||| |||| | ||||| |||||||||||||| ||||||    
T  12476462 gagaggcaaggagatacctctcgtgagagtcgtttggtcgggagcgactggtgaaagcttgacgtgggagcttgagagtaagatgctggagtcttatcca 12476363  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccc 182  Q
    || || |||   |||| || ||||| |||||||||||| || ||||||||||||| |||||| ||||    
T  12476362 gagttgtttgcttgaggtaaatttttgaggacgaaaatcttttaagtgggggagagttgtaatgccc 12476296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 16 - 182
Target Start/End: Complemental strand, 12523538 - 12523372
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    ||||||||||||||||||||| |||| ||||||||||   |||||| | |||||||| ||||||| |||| | ||||| |||||||||||||| |||| |    
T  12523538 gagaggcaaggagatacctctcgtgagagtcgtttggtcgggagcgactggtgaaagcttgacgtgggagcttgagagtaagatgctggagtcttatcta 12523439  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccc 182  Q
    || || |||   |||| || |||||||||||||||||| || ||||||||||||| || ||||||||    
T  12523438 gagttgtttgcttgaggtaaattttcgaggacgaaaatcttttaagtgggggagagttttaacgccc 12523372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 16 - 182
Target Start/End: Original strand, 14267049 - 14267215
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    |||||||||||||||||| || |||| ||||||||||   |||||| | |||||||| ||||||| |||| | ||||| |||||||||||||| ||||||    
T  14267049 gagaggcaaggagatacccctcgtgagagtcgtttggacgggagcgactggtgaaagcttgacgtgggagcttgagagtaagatgctggagtcttatcca 14267148  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccc 182  Q
    || || |||   |||| || |||||||||||||||||| || ||||||||||||| |||| ||||||    
T  14267149 gagttgtttgcttgaggtaaattttcgaggacgaaaatcttttaagtgggggagagttgtgacgccc 14267215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 16 - 182
Target Start/End: Complemental strand, 14680429 - 14680263
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    ||||||||| ||||||||||| |||| ||||||||||   |||||| | |||||||| |||| || |||| | ||||| |||||||||||||| ||||||    
T  14680429 gagaggcaaagagatacctctcgtgagagtcgtttggtcgggagcgactggtgaaagcttgatgtgggagcttgagagtaagatgctggagtcttatcca 14680330  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccc 182  Q
    || || |||   |||| || ||||||| |||||||||| || ||||||||||||| |||||||||||    
T  14680329 gaattgtttgcttgaggtaaattttcgtggacgaaaatcttttaagtgggggagagttgtaacgccc 14680263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 16 - 182
Target Start/End: Original strand, 16355595 - 16355761
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    |||||||||||| ||||| ||||||| |||||||||||  |||||| | |||||||| ||||||| |||| | ||||| ||||||| |||| | || |||    
T  16355595 gagaggcaaggaaataccccttgtgagagtcgtttgggatggagcgactggtgaaagcttgacgtgggagctagagagtaagatgcgggaggcttaccca 16355694  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccc 182  Q
    || || |||   |||| || |||||||||||||||||| || ||||| ||||||| |||||||||||    
T  16355695 gagttgtttgcttgaggtaaattttcgaggacgaaaatcttataagttggggagagttgtaacgccc 16355761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 16 - 114
Target Start/End: Original strand, 3265207 - 3265305
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcc 114  Q
    |||||| || |||||||||||||||| |||||||||||| |||||| | |||||||||||||| | |||| ||||||| ||||||| ||||||||||||    
T  3265207 gagaggtaaagagatacctcttgtgagagtcgtttggggtggagcgactggtgaaagtttgacttgggagctggagagtaagatgcgggagtcgtatcc 3265305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 16 - 114
Target Start/End: Complemental strand, 20890845 - 20890747
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcc 114  Q
    |||||| || |||||||||||||||| |||||||||||| |||||| | |||||||||||||| | |||| ||||||| ||||||| ||||||||||||    
T  20890845 gagaggtaatgagatacctcttgtgagagtcgtttggggtggagcgactggtgaaagtttgacttgggagctggagagtaagatgcgggagtcgtatcc 20890747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 16 - 114
Target Start/End: Original strand, 29453950 - 29454048
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcc 114  Q
    |||||| || |||||||||||||||| |||||||||||| |||||||| |||||||||||||| | |||| ||||||| | ||||| ||||||||||||    
T  29453950 gagaggtaaagagatacctcttgtgagagtcgtttggggtggagcggctggtgaaagtttgacttgggagctggagagtaggatgcaggagtcgtatcc 29454048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 17 - 182
Target Start/End: Complemental strand, 7090324 - 7090159
Alignment:
Q  17 agaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatccag 116  Q
    ||||||||||||||||||||||| | |||||||||||  |||||| | |||||||| || |||| | || | || || ||||||||||| || ||||||     
T  7090324 agaggcaaggagatacctcttgtaagagtcgtttgggacggagcgactggtgaaagcttaacgtggaagctagaaagtaagatgctggaatcttatccaa 7090225  T
Q  117 atttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccc 182  Q
    | || |||   ||||||| || ||||||||||||||| || ||||| ||||||| |||||||||||    
T  7090224 agttgtttgcttgagataaatattcgaggacgaaaatcttataagttggggagagttgtaacgccc 7090159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 16 - 182
Target Start/End: Original strand, 18227596 - 18227762
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    |||||||||||||||| | ||||  | |||| |||||   |||||| | |||||||| ||||||| |||| |  | || |||||||||||||| ||||||    
T  18227596 gagaggcaaggagatatcccttggtagagtcatttggcctggagcgactggtgaaagcttgacgtgggagcttaaaagtaagatgctggagtcttatcca 18227695  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccc 182  Q
    || || |||   |||| || |||||||||||||||||| || ||||||||||||| |||||||||||    
T  18227696 gagttgtttgcttgaggtaaattttcgaggacgaaaatcttttaagtgggggagagttgtaacgccc 18227762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 26 - 111
Target Start/End: Original strand, 11207654 - 11207739
Alignment:
Q  26 gagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgta 111  Q
    |||||||||||||||| |||||||||||| |||||| | |||||||||||||| | |||| ||||||| ||||||| |||||||||    
T  11207654 gagatacctcttgtgagagtcgtttggggtggagcgactggtgaaagtttgacttgggagctggagagtaagatgcgggagtcgta 11207739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 16 - 184
Target Start/End: Original strand, 15003774 - 15003941
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    |||||||||||| |||||||| ||||| || |||||||| ||||   |||||||||||||||| | |||| ||||||| ||||||| |||||| ||||||    
T  15003774 gagaggcaaggatatacctctagtgaaggttgtttggggtggagtaaccggtgaaagtttgacttgggagctggagagtaagatgcgggagtcttatcca 15003873  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgcccta 184  Q
    || || |||   |||| ||   ||||||||||| || || ||||||| | ||||| |||||||||||||    
T  15003874 gagttgtttgcttgaggtaatatttcgaggacgcaatta-tctaagttgaggagagttgtaacgcccta 15003941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 16 - 184
Target Start/End: Complemental strand, 15319445 - 15319279
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    |||||||||||| |||||||| ||||| || |||||||||||||   | |||||||||||||| |||||| ||||||| |||||||| ||||| ||||||    
T  15319445 gagaggcaaggatatacctctagtgaaggttgtttggggaggagtaactggtgaaagtttgacataggagctggagagtaagatgct-gagtcttatcca 15319347  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgcccta 184  Q
    || || |||   ||||  |   ||||||||||| ||||  ||||||| ||||||| |||||||||||||    
T  15319346 gagttgtttgcttgaggaaatatttcgaggacg-aaattctctaagttggggagagttgtaacgcccta 15319279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 115
Target Start/End: Original strand, 18164545 - 18164644
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    |||||||||||| |||||||| ||||| || |||||||| ||||   |||||||||||||||| | |||| ||||||| ||||||| |||||||||||||    
T  18164545 gagaggcaaggatatacctctcgtgaaggttgtttggggtggagtaaccggtgaaagtttgacttgggagctggagagtaagatgcgggagtcgtatcca 18164644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 111
Target Start/End: Complemental strand, 33222780 - 33222685
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgta 111  Q
    |||||| || |||||||||||||| | |||||||||||| |||||| | |||||||||||||| | |||| ||||||| ||||||| |||||||||    
T  33222780 gagaggtaaagagatacctcttgtaagagtcgtttggggtggagcgactggtgaaagtttgacttgggagctggagagtaagatgcgggagtcgta 33222685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 16 - 166
Target Start/End: Original strand, 18607980 - 18608130
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    |||||||||||||||| | ||||| | |||||||||||  |||||  | |||||||| || |||| |||| | ||||| |||||| |||| || ||||||    
T  18607980 gagaggcaaggagatatcccttgttagagtcgtttgggctggagcaactggtgaaagcttaacgtgggagcttgagagtaagatgttggactcttatcca 18608079  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggg 166  Q
    || ||||||   |||| || |||||||||||||||||| || |||||||||    
T  18608080 gagttatttgcttgaggtaaattttcgaggacgaaaatcttttaagtgggg 18608130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 16 - 114
Target Start/End: Original strand, 44662276 - 44662374
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcc 114  Q
    |||||| || |||||||||||||||| |||||||||||| |||||| | |||||||||||||| | | || ||||||| | ||||| ||||||||||||    
T  44662276 gagaggtaaagagatacctcttgtgagagtcgtttggggtggagcgactggtgaaagtttgacttggaagctggagagtaggatgcgggagtcgtatcc 44662374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 16 - 117
Target Start/End: Original strand, 15352036 - 15352137
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    |||||||||||| ||||| ||||| | |||||||||||  |||||| | |||||||| ||||||| |||| | ||||| |||||| ||||||| ||||||    
T  15352036 gagaggcaaggaaataccccttgttagagtcgtttgggatggagcgactggtgaaagcttgacgtgggagcttgagagtaagatgttggagtcttatcca 15352135  T
Q  116 ga 117  Q
    ||    
T  15352136 ga 15352137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 26 - 101
Target Start/End: Original strand, 1649697 - 1649772
Alignment:
Q  26 gagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgc 101  Q
    |||||||| ||||||| |||||||||||| |||||| | |||||||||||||| | |||| ||||||| |||||||    
T  1649697 gagataccccttgtgagagtcgtttggggtggagcgtctggtgaaagtttgacttgggagctggagagtaagatgc 1649772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 183
Target Start/End: Complemental strand, 14159354 - 14159188
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    ||||||||| |||||||| || ||||||||||||||||  |||||| | |||||||| ||||||| |||| | ||||| ||||||| ||  || |  |||    
T  14159354 gagaggcaaagagatacccctcgtgaaagtcgtttgggacggagcgacgggtgaaagcttgacgtgggagctagagagtaagatgcggggatctttccca 14159255  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccct 183  Q
    || || |||   |||| || ||||||||||| |||||| || ||| |||||| || ||||||||||||    
T  14159254 gagttgtttgcttgaggtaaattttcgaggatgaaaatcttataattggggg-gagttgtaacgccct 14159188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 173 - 246
Target Start/End: Complemental strand, 9622886 - 9622813
Alignment:
Q  173 tgtaacgccctaatttattatttagttattttatcgagtttagtgtcattttgaataatttatgtgaataattg 246  Q
    |||||||||||| ||||||||||  ||||||||||||| |||||||| ||||  ||| ||||| ||||||||||    
T  9622886 tgtaacgccctattttattattttattattttatcgagcttagtgtctttttatatagtttatttgaataattg 9622813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 173 - 243
Target Start/End: Complemental strand, 15782779 - 15782708
Alignment:
Q  173 tgtaacgccctaatttattatttagttattttatcgagtttagtgtcatttt-gaataatttatgtgaataa 243  Q
    |||||||||||| ||||||||||| ||||||||| |||||||||| | |||| | ||||||||| |||||||    
T  15782779 tgtaacgccctattttattatttatttattttattgagtttagtgcctttttggtataatttatttgaataa 15782708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 172 - 225
Target Start/End: Complemental strand, 14477994 - 14477941
Alignment:
Q  172 ttgtaacgccctaatttattatttagttattttatcgagtttagtgtcattttg 225  Q
    |||||| |||||| ||||||||||| |||||||||||| ||||||||| |||||    
T  14477994 ttgtaatgccctattttattatttatttattttatcgaatttagtgtctttttg 14477941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 117
Target Start/End: Complemental strand, 15326406 - 15326305
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    |||||||||||| |||||||| ||||| || |||||||| ||||   | ||||| |||||||| | |||| ||||||| ||||||| ||| || ||||||    
T  15326406 gagaggcaaggatatacctctagtgaaggttgtttggggtggagtaactggtgagagtttgacttgggagctggagagtaagatgcgggattcttatcca 15326307  T
Q  116 ga 117  Q
    ||    
T  15326306 ga 15326305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 117
Target Start/End: Original strand, 15359467 - 15359568
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    |||||||||||| |||||||| ||||| || |||||||| ||||   | ||||||| |||||| | |||| ||||||| |||| || ||||||| |||||    
T  15359467 gagaggcaaggatatacctctagtgaaggttgtttggggtggagtaactggtgaaattttgacttgggagctggagagtaagaagcgggagtcgaatcca 15359566  T
Q  116 ga 117  Q
    ||    
T  15359567 ga 15359568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 173 - 243
Target Start/End: Complemental strand, 18463388 - 18463317
Alignment:
Q  173 tgtaacgccctaatttattatttagttattttatcgagtttagtgtcatttt--gaataatttatgtgaataa 243  Q
    |||||| ||||| ||||||||||| |||||||||||||||||||| ||||||  | ||||||||| |||||||    
T  18463388 tgtaacaccctattttattatttatttattttatcgagtttagtg-catttttggtataatttatttgaataa 18463317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 204
Target Start/End: Complemental strand, 13879207 - 13879132
Alignment:
Q  128 tgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccctaatttattatttagttatttt 204  Q
    |||| |||||||||||||||||||||  | ||||| ||||||| |||||| ||||||| || ||||||| |||||||    
T  13879207 tgaggtacattttcgaggacgaaaattctttaagttggggagagttgtaatgccctaa-ttgttatttaattatttt 13879132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 215
Target Start/End: Complemental strand, 10706130 - 10706088
Alignment:
Q  173 tgtaacgccctaatttattatttagttattttatcgagtttag 215  Q
    |||||||||||||||||||||||| |||||||||  |||||||    
T  10706130 tgtaacgccctaatttattatttatttattttattaagtttag 10706088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 215
Target Start/End: Complemental strand, 10919900 - 10919858
Alignment:
Q  173 tgtaacgccctaatttattatttagttattttatcgagtttag 215  Q
    |||||||||||||||||||||||| |||||||||  |||||||    
T  10919900 tgtaacgccctaatttattatttatttattttattaagtttag 10919858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 215
Target Start/End: Complemental strand, 11426178 - 11426136
Alignment:
Q  173 tgtaacgccctaatttattatttagttattttatcgagtttag 215  Q
    |||||||||||| ||||||||||| ||||||||| ||||||||    
T  11426178 tgtaacgccctattttattatttatttattttattgagtttag 11426136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 214
Target Start/End: Complemental strand, 12623798 - 12623756
Alignment:
Q  172 ttgtaacgccctaatttattatttagttattttatcgagttta 214  Q
    ||||||||||||| ||||||||||| ||||||||| |||||||    
T  12623798 ttgtaacgccctattttattatttatttattttattgagttta 12623756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 215
Target Start/End: Complemental strand, 16616043 - 16616001
Alignment:
Q  173 tgtaacgccctaatttattatttagttattttatcgagtttag 215  Q
    |||||||||||| ||||||||||| ||||||||| ||||||||    
T  16616043 tgtaacgccctattttattatttatttattttattgagtttag 16616001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 215
Target Start/End: Original strand, 19565408 - 19565450
Alignment:
Q  173 tgtaacgccctaatttattatttagttattttatcgagtttag 215  Q
    |||||||||||| ||||||||||| ||||||||| ||||||||    
T  19565408 tgtaacgccctattttattatttatttattttattgagtttag 19565450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 215
Target Start/End: Original strand, 26920979 - 26921021
Alignment:
Q  173 tgtaacgccctaatttattatttagttattttatcgagtttag 215  Q
    |||||||||||| ||||||||||| ||||||||| ||||||||    
T  26920979 tgtaacgccctattttattatttatttattttattgagtttag 26921021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 215
Target Start/End: Complemental strand, 30139792 - 30139750
Alignment:
Q  173 tgtaacgccctaatttattatttagttattttatcgagtttag 215  Q
    |||||||||||| ||||||||||| ||||||||| ||||||||    
T  30139792 tgtaacgccctattttattatttatttattttattgagtttag 30139750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 215
Target Start/End: Complemental strand, 46741763 - 46741721
Alignment:
Q  173 tgtaacgccctaatttattatttagttattttatcgagtttag 215  Q
    |||||||||||| ||||||||||| ||||||||| ||||||||    
T  46741763 tgtaacgccctattttattatttatttattttattgagtttag 46741721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 215
Target Start/End: Complemental strand, 50161917 - 50161875
Alignment:
Q  173 tgtaacgccctaatttattatttagttattttatcgagtttag 215  Q
    |||||||||||| |||| |||||| ||||||||||||||||||    
T  50161917 tgtaacgccctattttaatatttatttattttatcgagtttag 50161875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 215
Target Start/End: Original strand, 53629674 - 53629716
Alignment:
Q  173 tgtaacgccctaatttattatttagttattttatcgagtttag 215  Q
    |||||||||||| ||||||||||| ||||||||| ||||||||    
T  53629674 tgtaacgccctattttattatttatttattttattgagtttag 53629716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 173 - 214
Target Start/End: Complemental strand, 40239029 - 40238988
Alignment:
Q  173 tgtaacgccctaatttattatttagttattttatcgagttta 214  Q
    |||||||||||| ||||||||||| ||||||||| |||||||    
T  40239029 tgtaacgccctattttattatttatttattttattgagttta 40238988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 175 - 215
Target Start/End: Complemental strand, 9639628 - 9639588
Alignment:
Q  175 taacgccctaatttattatttagttattttatcgagtttag 215  Q
    |||||||||| ||||||||||| ||||||||| ||||||||    
T  9639628 taacgccctattttattatttatttattttattgagtttag 9639588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 124
Target Start/End: Complemental strand, 15070275 - 15070167
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    ||||||||| || |||||||| ||||| || |||||||||||||   | ||||||||| | || | |||  ||||||| |||||| ||||||| |||| |    
T  15070275 gagaggcaaagatatacctctagtgaaggttgtttggggaggagtaactggtgaaagtctaacatgggaactggagagtaagatgttggagtcttatcta 15070176  T
Q  116 gatttattt 124  Q
    || ||||||    
T  15070175 gagttattt 15070167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 171 - 215
Target Start/End: Complemental strand, 26446801 - 26446757
Alignment:
Q  171 attgtaacgccctaatttattatttagttattttatcgagtttag 215  Q
    |||||||||||||| ||||||||||| |||||||||  |||||||    
T  26446801 attgtaacgccctattttattatttatttattttattaagtttag 26446757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0379 (Bit Score: 81; Significance: 3e-38; HSPs: 4)
Name: scaffold0379
Description:

Target: scaffold0379; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 16 - 184
Target Start/End: Original strand, 13390 - 13558
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    |||||||||| ||||||||||||||||||||||||||| |||| |||| |||||||| || |||| ||||||||| || |||||||||||||| ||||||    
T  13390 gagaggcaagaagatacctcttgtgaaagtcgtttgggaaggatcggctggtgaaagcttaacgtgggagttggaaagtaagatgctggagtcttatcca 13489  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgcccta 184  Q
    || || |||  | ||  |||||||||||||||||||||  | ||||| |||||||||||||| ||||||    
T  13490 gagttgtttgcacgaagtacattttcgaggacgaaaattctataagttggggagaattgtaatgcccta 13558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0379; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 138 - 233
Target Start/End: Complemental strand, 8543 - 8448
Alignment:
Q  138 tttcgaggacgaaaatattctaagtgggggagaattgtaacgccctaatttattatttagttattttatcgagtttagtgtcattttgaataattt 233  Q
    ||||||||| |||| | || ||||||||||||| ||||||||||||| ||||||||||| ||||||||| |||||||| ||| ||| || ||||||    
T  8543 tttcgaggatgaaattcttttaagtgggggagagttgtaacgccctattttattatttaattattttattgagtttagagtcctttagagtaattt 8448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0379; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 138 - 233
Target Start/End: Complemental strand, 15735 - 15640
Alignment:
Q  138 tttcgaggacgaaaatattctaagtgggggagaattgtaacgccctaatttattatttagttattttatcgagtttagtgtcattttgaataattt 233  Q
    ||||||||| |||| | || ||||||||||||| ||||||||||||| ||||||||||| ||||||||| |||||||| ||| ||| || ||||||    
T  15735 tttcgaggatgaaattcttttaagtgggggagagttgtaacgccctattttattatttaattattttattgagtttagagtcctttagagtaattt 15640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0379; HSP #4
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 172 - 215
Target Start/End: Complemental strand, 11393 - 11350
Alignment:
Q  172 ttgtaacgccctaatttattatttagttattttatcgagtttag 215  Q
    ||||||||||||| ||||||||||| ||||||||| ||||||||    
T  11393 ttgtaacgccctattttattatttaattattttattgagtttag 11350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold0234
Description:

Target: scaffold0234; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 16 - 184
Target Start/End: Original strand, 25484 - 25651
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    |||||||||||||||| |||| |||||||| ||||||||||||||  | ||||| |||||||||| |||||||||||| |||||||||||||| ||||||    
T  25484 gagaggcaaggagatatctctagtgaaagttgtttggggaggagcaactggtgagagtttgacgtgggagttggagagtaagatgctggagtcttatcca 25583  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgcccta 184  Q
    || || ||| | |||| || ||||||||||| |||||| | |||||| ||||||| |||||||||||||    
T  25584 gagttgtttgattgaggtatattttcgaggatgaaaat-tcctaagttggggagagttgtaacgcccta 25651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 80; Significance: 1e-37; HSPs: 44)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 172 - 259
Target Start/End: Original strand, 20707708 - 20707795
Alignment:
Q  172 ttgtaacgccctaatttattatttagttattttatcgagtttagtgtcattttgaataatttatgtgaataattgcgatgtgtgatgt 259  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20707708 ttgtaacgccttaatttattatttatttattttatcgagtttagtgtcattttgaataatttatgtgaataattgcgatgtgtgatgt 20707795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 16 - 182
Target Start/End: Original strand, 16351081 - 16351247
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    ||||||||||||||||||||| |||| ||||||||||   |||||| | |||||||| ||||||| |||| | ||||| |||||||||||||||||||||    
T  16351081 gagaggcaaggagatacctctcgtgagagtcgtttggtcgggagcgactggtgaaagcttgacgtgggagcttgagagtaagatgctggagtcgtatcca 16351180  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccc 182  Q
    || || |||   |||| || |||||||||||||||||| || ||||||||||||| |||||||||||    
T  16351181 gagttgtttacttgaggtaaattttcgaggacgaaaatcttttaagtgggggagagttgtaacgccc 16351247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 16 - 182
Target Start/End: Complemental strand, 20136655 - 20136489
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    ||||||||| |||||||||||||||| ||||||||||| ||||||| | |||||||| || |||| |||||| ||||| |||||||||||||| ||||||    
T  20136655 gagaggcaaagagatacctcttgtgagagtcgtttgggaaggagcgactggtgaaagcttaacgtgggagttagagagtaagatgctggagtcttatcca 20136556  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccc 182  Q
    || || |||   |||| || |||||||||||||||||| || ||||| ||||||| |||||||||||    
T  20136555 gagttgtttgcttgaggtaaattttcgaggacgaaaatcttataagttggggagagttgtaacgccc 20136489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 16 - 215
Target Start/End: Original strand, 19761348 - 19761545
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    ||||||||| |||||||||||||||||||||||||||| ||||||||  ||||||||||| |||| |||||| || || || ||||||||||| ||||||    
T  19761348 gagaggcaaagagatacctcttgtgaaagtcgtttgggaaggagcggatggtgaaagtttaacgtgggagttagaaagtaaaatgctggagtcttatcca 19761447  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccctaatttattatttagttattttatcgagtttag 215  Q
    || || ||   | ||| ||||||||| |||||||||||  | ||||| | ||||| ||||||||||||| || |||||||  ||||||| | ||||||||    
T  19761448 gagttgtt--cacgaggtacattttccaggacgaaaattctataagttgaggagagttgtaacgccctatttaattatttgattattttgttgagtttag 19761545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 16 - 215
Target Start/End: Original strand, 50612898 - 50613096
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    ||||||||| |||||||||||||||||||||||||||    ||||| | |||||||| || |||| |||||||||||| ||||||||||| || ||||||    
T  50612898 gagaggcaaagagatacctcttgtgaaagtcgtttggaacagagcgactggtgaaagcttaacgtgggagttggagagtaagatgctggaatcttatcca 50612997  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccctaatttattatttagttattttatcgagtttag 215  Q
    || || |||  ||||| || |||||||||||||||||| || ||||| ||||||| ||||||| |||   || |||||||| ||||||| | ||||||||    
T  50612998 gagttgtttgcatgaggta-attttcgaggacgaaaatcttataagttggggagagttgtaacacccgttttgattatttaattattttgttgagtttag 50613096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 16 - 215
Target Start/End: Original strand, 50620726 - 50620924
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    ||||||||| |||||||||||||||||||||||||||    ||||| | |||||||| || |||| |||||||||||| ||||||||||| || ||||||    
T  50620726 gagaggcaaagagatacctcttgtgaaagtcgtttggaacagagcgactggtgaaagcttaacgtgggagttggagagtaagatgctggaatcttatcca 50620825  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccctaatttattatttagttattttatcgagtttag 215  Q
    || || |||  ||||| || |||||||||||||||||| || ||||| ||||||| ||||||| |||   || |||||||| ||||||| | ||||||||    
T  50620826 gagttgtttgcatgaggta-attttcgaggacgaaaatcttataagttggggagagttgtaacacccgttttgattatttaattattttgttgagtttag 50620924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 16 - 182
Target Start/End: Complemental strand, 19106244 - 19106078
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    ||||||||||||||||||||| |||| ||||||||||   |||||| | |||||||| || |||| |||| | ||||| |||||||||||||| ||||||    
T  19106244 gagaggcaaggagatacctctcgtgagagtcgtttggacgggagcgactggtgaaagcttaacgtgggagcttgagagtaagatgctggagtcttatcca 19106145  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccc 182  Q
    || || |||   |||| || |||||||||||||||||| || ||||||||||||| |||||||||||    
T  19106144 gagttgtttgcttgaggtaaattttcgaggacgaaaatcttttaagtgggggagagttgtaacgccc 19106078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 16 - 182
Target Start/End: Original strand, 33391511 - 33391677
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    ||||||||||||||||||||| |||| ||||||||||   |||||| | |||||||| ||||||| |||| | ||||| |||||||||||||| ||||||    
T  33391511 gagaggcaaggagatacctctcgtgagagtcgtttggacgggagcgactggtgaaagcttgacgtgggagcttgagagtaagatgctggagtcttatcca 33391610  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccc 182  Q
    || || |||   | || || |||||||||||||||||| || ||||||||||||| |||||||||||    
T  33391611 gagttgtttgcttaaggtaaattttcgaggacgaaaatcttttaagtgggggagagttgtaacgccc 33391677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 20 - 182
Target Start/End: Original strand, 41354955 - 41355117
Alignment:
Q  20 ggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatccagatt 119  Q
    ||||| ||||||||||| |||| ||||||||||   |||||| | |||||||| ||||||| |||| | ||||| ||||||||||||||||||||||| |    
T  41354955 ggcaaagagatacctctcgtgagagtcgtttggtcgggagcgactggtgaaagcttgacgtgggagcttgagagtaagatgctggagtcgtatccagagt 41355054  T
Q  120 tatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccc 182  Q
    | |||   |||| || |||||||||||||||||| || ||||||||||||| |||||||||||    
T  41355055 tgtttacttgaggtaaattttcgaggacgaaaatcttttaagtgggggagagttgtaacgccc 41355117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 16 - 182
Target Start/End: Original strand, 51333975 - 51334141
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    ||||||||||||||||||||| |||| ||||||||||   |||||| | |||||||| ||||||| |||| | ||||| |||||||||||||| ||||||    
T  51333975 gagaggcaaggagatacctctcgtgagagtcgtttggtcgggagcgactggtgaaagcttgacgtgggagcttgagagtaagatgctggagtcttatcca 51334074  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccc 182  Q
    || || |||   |||| || ||||||||||||||||||  | ||||||||||||| |||||||||||    
T  51334075 gagttgtttgcttgaggtaaattttcgaggacgaaaatcctttaagtgggggagagttgtaacgccc 51334141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 16 - 179
Target Start/End: Complemental strand, 21836827 - 21836664
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    ||||||||||||||||||||| |||| ||||||||||   |||||| | |||||||| ||||||| |||| | ||||| |||||||||||||| ||||||    
T  21836827 gagaggcaaggagatacctctcgtgagagtcgtttggacgggagcgactggtgaaagcttgacgtgggagcttgagagtaagatgctggagtcttatcca 21836728  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacg 179  Q
    || || |||   |||| || |||||||||||||||||| || |||||||||| || ||||||||    
T  21836727 gagttgtttgcttgaggtaaattttcgaggacgaaaatcttttaagtgggggggagttgtaacg 21836664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 16 - 182
Target Start/End: Complemental strand, 21830180 - 21830014
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    ||||||||||||||||||||| |||| ||||||||||   | |||| | |||||||| ||||||| |||| | ||||| |||||||||||||| ||||||    
T  21830180 gagaggcaaggagatacctctcgtgagagtcgtttggacggaagcgactggtgaaagcttgacgtgggagcttgagagtaagatgctggagtcttatcca 21830081  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccc 182  Q
    || || ||    |||| || |||||||||||||||||| || ||||||||||||| |||||||||||    
T  21830080 gagttgttcgcttgaggtaaattttcgaggacgaaaatcttttaagtgggggagagttgtaacgccc 21830014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 16 - 182
Target Start/End: Complemental strand, 21163157 - 21162991
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    |||||||||||| |||||||| |||| |||||||| ||  |||||| | |||||||| || |||| |||| | ||||| |||||||||||||| ||||||    
T  21163157 gagaggcaaggatatacctctcgtgatagtcgttttggacggagcgactggtgaaagcttaacgtgggagctagagagtaagatgctggagtcttatcca 21163058  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccc 182  Q
    || || ||| || ||| || ||||||||||| |||||| || ||||| ||||||| |||||||||||    
T  21163057 gagttgtttaaacgaggtaaattttcgaggatgaaaatcttataagttggggagagttgtaacgccc 21162991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 16 - 183
Target Start/End: Complemental strand, 20249727 - 20249560
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    |||||||||||| ||||||||||||| |||||||||||  ||| || | |||||||| || |||| |||| | ||||| ||||||||||| || ||||||    
T  20249727 gagaggcaaggatatacctcttgtgagagtcgtttgggacggaacgactggtgaaagcttaacgtgggagctagagagtaagatgctggaatcttatcca 20249628  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccct 183  Q
    || || ||| | |||| |  |||||| ||||||||||| || ||||| ||||||| ||||||||||||    
T  20249627 gagttgtttgattgaggttaattttctaggacgaaaatcttataagttggggagagttgtaacgccct 20249560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 16 - 183
Target Start/End: Complemental strand, 21747412 - 21747245
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    ||||||||| |||||||||||||||| |||||||||||  |||||| | |||||||| || |||| |||| | || || ||||||||||| || |||| |    
T  21747412 gagaggcaaagagatacctcttgtgagagtcgtttgggacggagcgactggtgaaagcttaacgtgggagctagaaagtaagatgctggaatcttatcta 21747313  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccct 183  Q
    || || |||  ||||| || |||||||||||||||||| || ||||| ||| ||| ||||||||||||    
T  21747312 gagttgtttgcatgaggtaaattttcgaggacgaaaatcttataagttgggtagagttgtaacgccct 21747245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 16 - 182
Target Start/End: Original strand, 16079115 - 16079281
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    ||||||||||||||||||||| || | |||||||||||  |||||| | |||||||| ||||| | |||| | || || ||| |||||||||| ||||||    
T  16079115 gagaggcaaggagatacctctcgttagagtcgtttgggctggagcgactggtgaaagcttgacatgggagctagaaagtaagttgctggagtcttatcca 16079214  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccc 182  Q
    || || |||   |||| || |||||||||||||||||| || ||||| ||||||| |||||||||||    
T  16079215 gagttgtttgcttgaggtaaattttcgaggacgaaaatcttttaagttggggagagttgtaacgccc 16079281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 16 - 114
Target Start/End: Complemental strand, 20294289 - 20294191
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcc 114  Q
    |||||| ||||||||||||||||||| |||||||||||| |||||| | |||||||||||||| | |||| ||||||| ||||||| ||||||||||||    
T  20294289 gagaggtaaggagatacctcttgtgagagtcgtttggggtggagcgactggtgaaagtttgacttgggagctggagagtaagatgcgggagtcgtatcc 20294191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 16 - 114
Target Start/End: Original strand, 31550663 - 31550761
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcc 114  Q
    |||||| || ||||| |||||||||| |||||||||||| |||||| | |||||||||||||| | |||| ||||||| ||||||| ||||||||||||    
T  31550663 gagaggtaaagagattcctcttgtgagagtcgtttggggtggagcgactggtgaaagtttgacttgggagctggagagtaagatgcgggagtcgtatcc 31550761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 16 - 114
Target Start/End: Complemental strand, 37676953 - 37676855
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcc 114  Q
    |||||| || |||||||||||||||| |||||||||||| |||||| | |||||||||||||| | |||| ||||||| | ||||| ||||||||||||    
T  37676953 gagaggtaaagagatacctcttgtgagagtcgtttggggtggagcgactggtgaaagtttgacttgggagctggagagtaggatgcgggagtcgtatcc 37676855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 16 - 184
Target Start/End: Original strand, 19665358 - 19665525
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    |||||||||||| |||||||| ||||| || |||||||| ||||   | ||||| |||||||| | |||| ||||||| ||||||| |||||||||||||    
T  19665358 gagaggcaaggatatacctctagtgaaggttgtttggggtggagtaactggtgagagtttgacttgggagctggagagtaagatgcgggagtcgtatcca 19665457  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgcccta 184  Q
    || || ||| | |||  ||   ||||||||||| ||||  ||||||| ||||||| |||||||||||||    
T  19665458 gagttgtttgattgaagtaagatttcgaggacg-aaattctctaagttggggagagttgtaacgcccta 19665525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 23 - 114
Target Start/End: Original strand, 20075551 - 20075642
Alignment:
Q  23 aaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcc 114  Q
    |||||||||| |||||||| |||||||||| | |||||| | |||||||||||||| | |||| ||||||| ||||||| ||||||||||||    
T  20075551 aaggagatacatcttgtgagagtcgtttggagtggagcgactggtgaaagtttgacttgggagctggagagtaagatgcgggagtcgtatcc 20075642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 16 - 114
Target Start/End: Original strand, 20395478 - 20395576
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcc 114  Q
    |||||| || |||||||||||||||| |||||||||||| |||||| |  ||||||||||||| | |||| ||||||| ||||||| ||||| ||||||    
T  20395478 gagaggtaaagagatacctcttgtgagagtcgtttggggtggagcgactagtgaaagtttgacttgggagctggagagtaagatgcgggagttgtatcc 20395576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 16 - 117
Target Start/End: Complemental strand, 21736630 - 21736529
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    |||||||||||| |||||||| ||||| || |||||||||| |    |||||||||||||||| | |||| ||||||| ||||||| |||||||||||||    
T  21736630 gagaggcaaggatatacctctagtgaaggttgtttggggagaaataaccggtgaaagtttgacttgggagctggagagtaagatgcgggagtcgtatcca 21736531  T
Q  116 ga 117  Q
    ||    
T  21736530 ga 21736529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 175 - 254
Target Start/End: Complemental strand, 34393202 - 34393123
Alignment:
Q  175 taacgccctaatttattatttagttattttatcgagtttagtgtcattttgaataatttatgtgaataattgcgatgtgt 254  Q
    |||||||||| ||||||||||| ||||||||| ||||||| |||  ||||| ||||||||| |||||||||| |||||||    
T  34393202 taacgccctattttattatttatttattttattgagtttaatgtttttttgtataatttatttgaataattgtgatgtgt 34393123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 20 - 117
Target Start/End: Complemental strand, 20244073 - 20243976
Alignment:
Q  20 ggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatccaga 117  Q
    |||||||| ||||| ||||||| |||||||||||  |||||| | |||||||||||||| | |||| ||||||| ||||||| ||| || ||||||||    
T  20244073 ggcaaggaaataccccttgtgagagtcgtttgggacggagcgactggtgaaagtttgacttgggagctggagagtaagatgcgggattcttatccaga 20243976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 20 - 101
Target Start/End: Original strand, 22433602 - 22433683
Alignment:
Q  20 ggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgc 101  Q
    |||||||| ||||| ||||||| |||||||||||| |||||||| ||||| |||||||| | |||| ||||||| |||||||    
T  22433602 ggcaaggaaataccccttgtgagagtcgtttggggcggagcggctggtgagagtttgacttgggagctggagagtaagatgc 22433683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 117
Target Start/End: Original strand, 20940545 - 20940646
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    |||||||||||| |||||||| ||||| || |||||||| ||||   |  |||| |||||||| | |||| ||||||| ||||||| |||||||||||||    
T  20940545 gagaggcaaggatatacctctagtgaaggttgtttggggtggagtaactagtgagagtttgacttgggagctggagagtaagatgcgggagtcgtatcca 20940644  T
Q  116 ga 117  Q
    ||    
T  20940645 ga 20940646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 138 - 215
Target Start/End: Complemental strand, 37191836 - 37191759
Alignment:
Q  138 tttcgaggacgaaaatattctaagtgggggagaattgtaacgccctaatttattatttagttattttatcgagtttag 215  Q
    |||||||||||||| |||| |||  |||| ||| ||||||| ||||| ||||||||||| ||||||||| ||||||||    
T  37191836 tttcgaggacgaaattattttaaagggggtagagttgtaacaccctattttattatttatttattttattgagtttag 37191759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 170 - 215
Target Start/End: Original strand, 21238721 - 21238766
Alignment:
Q  170 aattgtaacgccctaatttattatttagttattttatcgagtttag 215  Q
    ||||||||||||||| ||||||||||| ||||||||| ||||||||    
T  21238721 aattgtaacgccctattttattatttatttattttattgagtttag 21238766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 170 - 215
Target Start/End: Original strand, 24718968 - 24719013
Alignment:
Q  170 aattgtaacgccctaatttattatttagttattttatcgagtttag 215  Q
    ||||||||||||||| ||||||||||| ||||||||| ||||||||    
T  24718968 aattgtaacgccctattttattatttatttattttattgagtttag 24719013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 172 - 215
Target Start/End: Original strand, 8275492 - 8275535
Alignment:
Q  172 ttgtaacgccctaatttattatttagttattttatcgagtttag 215  Q
    ||||||||||||| ||||||||||| ||||||||| ||||||||    
T  8275492 ttgtaacgccctattttattatttatttattttattgagtttag 8275535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 173 - 243
Target Start/End: Original strand, 21187720 - 21187791
Alignment:
Q  173 tgtaacgccctaatttattatttagttattttatcgagtttagtgtcatttt-gaataatttatgtgaataa 243  Q
    |||||||||||| ||| ||||| | |||||||||||||||||||| | |||| | ||||||||| |||||||    
T  21187720 tgtaacgccctattttgttattcatttattttatcgagtttagtgcctttttggtataatttatttgaataa 21187791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 173 - 224
Target Start/End: Complemental strand, 45499963 - 45499912
Alignment:
Q  173 tgtaacgccctaatttattatttagttattttatcgagtttagtgtcatttt 224  Q
    |||||||||||| ||||||||||| ||||||||| |||||||| ||| ||||    
T  45499963 tgtaacgccctagtttattatttatttattttattgagtttagagtcttttt 45499912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 172 - 215
Target Start/End: Complemental strand, 50546358 - 50546315
Alignment:
Q  172 ttgtaacgccctaatttattatttagttattttatcgagtttag 215  Q
    ||||||||||||| ||||||||||| ||||||||| ||||||||    
T  50546358 ttgtaacgccctattttattatttatttattttattgagtttag 50546315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 215
Target Start/End: Complemental strand, 18122540 - 18122498
Alignment:
Q  173 tgtaacgccctaatttattatttagttattttatcgagtttag 215  Q
    |||||||||||| ||||||||||| ||||||||| ||||||||    
T  18122540 tgtaacgccctattttattatttatttattttattgagtttag 18122498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 215
Target Start/End: Complemental strand, 20589299 - 20589257
Alignment:
Q  173 tgtaacgccctaatttattatttagttattttatcgagtttag 215  Q
    |||||||||||| ||||||||||| ||||||||| ||||||||    
T  20589299 tgtaacgccctattttattatttatttattttattgagtttag 20589257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 215
Target Start/End: Complemental strand, 20593837 - 20593795
Alignment:
Q  173 tgtaacgccctaatttattatttagttattttatcgagtttag 215  Q
    |||||||||||| ||||||||||| ||||||||| ||||||||    
T  20593837 tgtaacgccctattttattatttatttattttattgagtttag 20593795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 215
Target Start/End: Original strand, 21045430 - 21045472
Alignment:
Q  173 tgtaacgccctaatttattatttagttattttatcgagtttag 215  Q
    |||||||||||| ||||||||||| ||||||||| ||||||||    
T  21045430 tgtaacgccctattttattatttatttattttattgagtttag 21045472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 215
Target Start/End: Original strand, 24722876 - 24722918
Alignment:
Q  173 tgtaacgccctaatttattatttagttattttatcgagtttag 215  Q
    |||||||||||| ||||||||||| ||||||||| ||||||||    
T  24722876 tgtaacgccctattttattatttatttattttattgagtttag 24722918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 170 - 215
Target Start/End: Original strand, 16057722 - 16057767
Alignment:
Q  170 aattgtaacgccctaatttattatttagttattttatcgagtttag 215  Q
    ||||||||||||||| |||| |||||| ||||||||| ||||||||    
T  16057722 aattgtaacgccctattttaatatttatttattttattgagtttag 16057767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 173 - 214
Target Start/End: Original strand, 21099243 - 21099284
Alignment:
Q  173 tgtaacgccctaatttattatttagttattttatcgagttta 214  Q
    |||||||||||| ||||||||||| ||||||||| |||||||    
T  21099243 tgtaacgccctattttattatttatttattttattgagttta 21099284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 171 - 215
Target Start/End: Complemental strand, 25250567 - 25250524
Alignment:
Q  171 attgtaacgccctaatttattatttagttattttatcgagtttag 215  Q
    |||||||||||||| ||||||||||| ||||||||| ||||||||    
T  25250567 attgtaacgcccta-tttattatttatttattttattgagtttag 25250524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 174 - 214
Target Start/End: Complemental strand, 35895493 - 35895453
Alignment:
Q  174 gtaacgccctaatttattatttagttattttatcgagttta 214  Q
    ||||||||||| ||||||||||| ||||||||| |||||||    
T  35895493 gtaacgccctattttattatttatttattttattgagttta 35895453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 171 - 215
Target Start/End: Complemental strand, 44892973 - 44892929
Alignment:
Q  171 attgtaacgccctaatttattatttagttattttatcgagtttag 215  Q
    |||||||| ||||| ||||||||||| ||||||||| ||||||||    
T  44892973 attgtaacaccctattttattatttatttattttattgagtttag 44892929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 78; Significance: 2e-36; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 16 - 113
Target Start/End: Original strand, 86917 - 87014
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatc 113  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||| ||||||||| || |||||||||||||||||||    
T  86917 gagaggcaaggagatacctcttgtgaaagtcgtttgggaaggagcggctggtgaaagtttgacgtgggagttggaaagtaagatgctggagtcgtatc 87014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 138 - 235
Target Start/End: Original strand, 18316 - 18415
Alignment:
Q  138 tttcgaggacgaaaatattctaagtgggggagaattgtaacgccctaattt--attatttagttattttatcgagtttagtgtcattttgaataatttat 235  Q
    |||| ||||||||  | |||||||||||||||| ||||||||| ||| |||   || |||| ||||||||| |||| ||| ||| ||| |||||||||||    
T  18316 tttcaaggacgaagttcttctaagtgggggagagttgtaacgcgctatttttatttgtttatttattttattgagtatagagtcttttagaataatttat 18415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165 (Bit Score: 75; Significance: 1e-34; HSPs: 3)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 16 - 182
Target Start/End: Original strand, 26334 - 26500
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    ||||||||| ||||||||||||||||||||||||||||  || ||| | |||||||| ||||||| |||||||||||| |||||| ||||||| |||| |    
T  26334 gagaggcaaagagatacctcttgtgaaagtcgtttgggacggggcgactggtgaaagcttgacgtgggagttggagagtaagatgttggagtcttatcta 26433  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccc 182  Q
    || || |||   |||| || |||||||||||||||||| || ||||| ||||||| |||||||||||    
T  26434 gagttgtttgcttgaggtaaattttcgaggacgaaaatcttataagttggggagagttgtaacgccc 26500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 170 - 243
Target Start/End: Complemental strand, 32331 - 32258
Alignment:
Q  170 aattgtaacgccctaatttattatttagttattttatcgagtttagtgtcatttt-gaataatttatgtgaataa 243  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||| || | |||| | ||||||||| |||||||    
T  32331 aattgtaacgccctattttattattta-ttattttatcgagtttaatgcctttttggtataatttatttgaataa 32258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165; HSP #3
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 17 - 114
Target Start/End: Complemental strand, 1069 - 972
Alignment:
Q  17 agaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcc 114  Q
    |||| |||||| |||||||| || || || |||||||||||||   | |||||||||||||| | |||| ||||||| ||||||| ||| || |||||    
T  1069 agagtcaaggatatacctctagtaaaggttgtttggggaggagtaactggtgaaagtttgacttgggagctggagagtaagatgcgggaatcttatcc 972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 16 - 182
Target Start/End: Complemental strand, 180110 - 179944
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    ||||||||||||||||||||||||||  |||||||||   |||||| | |||||||| ||||||| |||| | ||||| |||||||||||||| ||||||    
T  180110 gagaggcaaggagatacctcttgtgagggtcgtttggaacggagcgactggtgaaagcttgacgtgggagcttgagagtaagatgctggagtcttatcca 180011  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccc 182  Q
    || || |||  ||||| || |||||||||||||||||| || ||||| ||||||| |||||||||||    
T  180010 gagttgtttgcatgaggtaaattttcgaggacgaaaatcttttaagttggggagagttgtaacgccc 179944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0962 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0962
Description:

Target: scaffold0962; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 16 - 204
Target Start/End: Original strand, 103 - 290
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    |||||||||||||||| |||| |||||||| |||||||||||||   | ||||| |||||||||| |||||||||||| |||||| ||||||| ||||||    
T  103 gagaggcaaggagatatctctagtgaaagttgtttggggaggagaaactggtgagagtttgacgtgggagttggagagtaagatgttggagtcttatcca 202  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccctaatttattatttagttatttt 204  Q
    || || ||| | |||| ||  |||||||||||||||||  | ||||| ||||||| |||||| ||||||| || ||||||| |||||||    
T  203 gagttgtttgattgaggtatgttttcgaggacgaaaattctttaagttggggagagttgtaatgccctaa-ttcttatttaattatttt 290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0359 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0359
Description:

Target: scaffold0359; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 16 - 204
Target Start/End: Complemental strand, 16880 - 16692
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||| |||||||| || |||| |||| | ||||| |||||| ||||||| ||||||    
T  16880 gagaggcaaggagatacctcttgtgaaagtcgtttgggaaggagcggctggtgaaagcttaacgtgggagctagagagtaagatgttggagtcttatcca 16781  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccctaatttattatttagttatttt 204  Q
    || || ||   ||||| ||||||||  ||||||||||   | ||||| ||||||| ||||||||||||  || |||||||  |||||||    
T  16780 gagttgttcgcatgaggtacattttttaggacgaaaaatctataagttggggagagttgtaacgccctctttgattatttgattatttt 16692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476 (Bit Score: 72; Significance: 8e-33; HSPs: 1)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 16 - 183
Target Start/End: Complemental strand, 9236 - 9069
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    |||||||||||||||||||||||||| ||||||||||| ||||||| | | |||||| || |||| |||| | ||||| |||||||||| ||| ||||||    
T  9236 gagaggcaaggagatacctcttgtgagagtcgtttgggaaggagcgactgatgaaagcttaacgtgggagctagagagtaagatgctggtgtcttatcca 9137  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccct 183  Q
    || || |||  || || || |||||||||||||||||| || ||||| ||||||| ||||||||||||    
T  9136 gagttgtttgcattaggtaaattttcgaggacgaaaatcttataagttggggagagttgtaacgccct 9069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0431 (Bit Score: 72; Significance: 8e-33; HSPs: 1)
Name: scaffold0431
Description:

Target: scaffold0431; HSP #1
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 16 - 215
Target Start/End: Complemental strand, 7270 - 7071
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    ||||||||||||||||||||| |||| ||||||||||   |||||| | |||||||| ||||||| |||| | ||||| | |||||||||||| ||||||    
T  7270 gagaggcaaggagatacctctcgtgagagtcgtttggacgggagcgactggtgaaagcttgacgtgggagcttgagagtaggatgctggagtcttatcca 7171  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccctaatttattatttagttattttatcgagtttag 215  Q
    || || |||   |||| || |||||||||||||||||| || ||||||||||||| |||||||||||   ||| ||| ||  |||||| |||||||||||    
T  7170 gagttgtttgcttgaggtaaattttcgaggacgaaaatcttttaagtgggggagagttgtaacgcccacttttgttaattgcttatttaatcgagtttag 7071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0459 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0459
Description:

Target: scaffold0459; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 16 - 182
Target Start/End: Complemental strand, 307 - 141
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    ||||||||||||||||||||| |||| ||||||||||  ||||||| | |||||||| |||||||||||| | | ||| |||||||||||||| ||||||    
T  307 gagaggcaaggagatacctctcgtgagagtcgtttggttaggagcgactggtgaaagcttgacgtaggagcttgggagtaagatgctggagtcttatcca 208  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccc 182  Q
    || || |||   | || || |||||||||||||||||| || ||| ||||||||| |||||||||||    
T  207 gagttgtttacttaaggtaaattttcgaggacgaaaatcttttaaatgggggagagttgtaacgccc 141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 71; Significance: 3e-32; HSPs: 2)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 16 - 182
Target Start/End: Original strand, 1235 - 1401
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    |||||||||||||||||| ||||||| ||||||||||   |||||| | |||||||| ||||||| |||| | ||||| |||||||||||||| ||||||    
T  1235 gagaggcaaggagataccccttgtgagagtcgtttggaacggagcgactggtgaaagcttgacgtgggagctagagagtaagatgctggagtcttatcca 1334  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccc 182  Q
    || || |||  ||||| |  |||||||||||||||||| || ||||| ||||||| |||||||||||    
T  1335 gagttgtttgcatgaggttaattttcgaggacgaaaatcttataagttggggagagttgtaacgccc 1401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 138 - 215
Target Start/End: Complemental strand, 14529 - 14452
Alignment:
Q  138 tttcgaggacgaaaatattctaagtgggggagaattgtaacgccctaatttattatttagttattttatcgagtttag 215  Q
    |||||||||||||| | || |||| |||| | | ||||||||||||| ||||||||||| ||||||||| ||||||||    
T  14529 tttcgaggacgaaattcttttaaggggggtatagttgtaacgccctattttattatttatttattttattgagtttag 14452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 16 - 182
Target Start/End: Original strand, 33165 - 33331
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    ||||||||| |||||||||||||||||||||||||  |  |||||| | |||||||| || |||| |||||||||||| ||||||||||| || ||||||    
T  33165 gagaggcaaagagatacctcttgtgaaagtcgtttaagacggagcgactggtgaaagcttaacgtgggagttggagagtaagatgctggaatcttatcca 33264  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccc 182  Q
    || || |||  | ||| || |||||||||||||||||| || ||||| ||||||| |||||||||||    
T  33265 gagttgtttgcacgaggtaaattttcgaggacgaaaatcttataagttggggagagttgtaacgccc 33331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 71; Significance: 3e-32; HSPs: 2)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 16 - 182
Target Start/End: Complemental strand, 14253 - 14087
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    |||||||||||||||||| ||||| | |||||||||||  |||||| | |||||||| ||||||| |||| | ||||| |||||||||||||| ||||||    
T  14253 gagaggcaaggagataccccttgttagagtcgtttgggctggagcgactggtgaaagcttgacgtgggagcttgagagtaagatgctggagtcttatcca 14154  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccc 182  Q
    || || |||   |||| || |||||||||||||||||| || ||||| ||||||| |||||||||||    
T  14153 gagttgtttgcttgaggtaaattttcgaggacgaaaatcttttaagttggggagagttgtaacgccc 14087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #2
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 16 - 182
Target Start/End: Complemental strand, 513 - 347
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    ||||||||||||||||||||| |||| ||||||||||   |||||| | |||||||| ||||||| |||| | ||| | |||||||||||||| ||||||    
T  513 gagaggcaaggagatacctctcgtgagagtcgtttggacgggagcgactggtgaaagcttgacgtgggagcttgagcgtaagatgctggagtcttatcca 414  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccc 182  Q
    || || |||   |||| || |||||||||||||||||| || ||||||||||||  |||||||||||    
T  413 gagttgtttgcttgaggtaaattttcgaggacgaaaatcttttaagtgggggagggttgtaacgccc 347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 16 - 182
Target Start/End: Original strand, 64444 - 64610
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    |||||||||||||||||||||||||| |||||||||||   |||||   |||||||| ||||||| |||| | ||||| |||||| ||||||| ||||||    
T  64444 gagaggcaaggagatacctcttgtgagagtcgtttgggacagagcgaatggtgaaagcttgacgtgggagcttgagagtaagatggtggagtcttatcca 64543  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccc 182  Q
    || || |||  ||||| || |||||||||||||||||| || ||||| ||||||| |||||||||||    
T  64544 gagttgtttgcatgaggtaaattttcgaggacgaaaatcttataagttggggagagttgtaacgccc 64610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 71; Significance: 3e-32; HSPs: 5)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 16 - 182
Target Start/End: Complemental strand, 43047 - 42881
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    ||||||||||||||||||||| |||| ||||||||||   |||||| | |||||||| ||||||| |||| | ||||| |||||||||||||| ||||||    
T  43047 gagaggcaaggagatacctctcgtgagagtcgtttggacgggagcgactggtgaaagcttgacgtgggagcttgagagtaagatgctggagtcctatcca 42948  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccc 182  Q
    ||  | |||   |||| || |||||||||||||||||| || ||||||||||||| |||||||||||    
T  42947 gagctgtttgcttgaggtaaattttcgaggacgaaaatcttttaagtgggggagagttgtaacgccc 42881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 16 - 182
Target Start/End: Complemental strand, 62182 - 62016
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    ||||||||||||||||||||| |||| ||||||||||   |||||| | |||||||| ||||||| |||| | ||||| |||||||||||||| ||||||    
T  62182 gagaggcaaggagatacctctcgtgagagtcgtttggacgggagcgactggtgaaagcttgacgtgggagcttgagagtaagatgctggagtcctatcca 62083  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccc 182  Q
    ||  | |||   |||| || |||||||||||||||||| || ||||||||||||| |||||||||||    
T  62082 gagctgtttgcttgaggtaaattttcgaggacgaaaatcttttaagtgggggagagttgtaacgccc 62016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 16 - 184
Target Start/End: Original strand, 2540 - 2708
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    ||||||||||||||||||||||||||| ||||||| || ||||||| | ||||| ||||| |||| |||| |||| || |||||||| ||||| ||||||    
T  2540 gagaggcaaggagatacctcttgtgaaggtcgtttaggaaggagcgactggtgagagtttaacgtgggagctggaaagtaagatgctagagtcttatcca 2639  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgcccta 184  Q
    || |  |||  ||||| | ||||||||||||| ||||| || ||||| ||||||| |||||||||||||    
T  2640 gagtcgtttgcatgaggtgcattttcgaggacaaaaattttataagttggggagagttgtaacgcccta 2708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 16 - 215
Target Start/End: Complemental strand, 8378 - 8179
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    ||||||||||||||||||||| |||| | ||||||||   ||| || | ||||| || ||||||| |||| | ||||| |||||||| ||||| ||||||    
T  8378 gagaggcaaggagatacctctcgtgagattcgtttggacgggaacgactggtgagagcttgacgtgggagcttgagagtaagatgctagagtcttatcca 8279  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccctaatttattatttagttattttatcgagtttag 215  Q
    || ||||||   |||| || |||||||||||||||||| || ||| ||||||||| |||||||||||   ||| ||| ||  |||||| |||||||||||    
T  8278 gagttatttgcttgaggtaaattttcgaggacgaaaatcttttaattgggggagagttgtaacgcccacttttgttaattgcttatttaatcgagtttag 8179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 184
Target Start/End: Original strand, 50927 - 51094
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    |||||| || |||||||| ||||||| |||||||||||| |||||| |  | |||||||| || | |||| |||| || ||||||| ||||| ||| |||    
T  50927 gagaggtaaagagataccacttgtgagagtcgtttggggtggagcgactagagaaagtttaacttgggagctggaaagtaagatgcgggagttgtaccca 51026  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgcccta 184  Q
    || || |||   |||| ||   ||||||||| | ||||  ||||||| ||||||| |||||||||||||    
T  51027 gagttgtttgtttgaggtaagatttcgaggatg-aaatcctctaagttggggagagttgtaacgcccta 51094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 69; Significance: 5e-31; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 138 - 254
Target Start/End: Original strand, 68358 - 68473
Alignment:
Q  138 tttcgaggacgaaaatattctaagtgggggagaattgtaacgccctaatttattatttagttattttatcgagtttagtgtcattttgaataatttatgt 237  Q
    ||||||| |||||| | || ||||||||||||| ||||||||||||| ||||||||||| |||||||||||||||||||||| ||||| ||||||||| |    
T  68358 tttcgagtacgaaattcttttaagtgggggagagttgtaacgccctattttattatttatttattttatcgagtttagtgtc-ttttgtataatttattt 68456  T
Q  238 gaataattgcgatgtgt 254  Q
    ||||||||| |||||||    
T  68457 gaataattgtgatgtgt 68473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 16 - 215
Target Start/End: Original strand, 16878 - 17076
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    ||||||||| ||||||||||||||||||||||||||||   ||||| |  ||||||| || |||| |||||||||||| |||||||||||||| ||||||    
T  16878 gagaggcaaagagatacctcttgtgaaagtcgtttgggactgagcgactagtgaaagcttaacgtgggagttggagagtaagatgctggagtcttatcca 16977  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccctaatttattatttagttattttatcgagtttag 215  Q
    || || |||   |||| || | |||||||||||||||| || ||||| ||||||| |||||||||||   || ||||||||  |||||| | ||||||||    
T  16978 gagttgtttgcttgaggta-aatttcgaggacgaaaatcttataagttggggagagttgtaacgcccgttttgattatttaaatattttgttgagtttag 17076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 68; Significance: 2e-30; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 16 - 183
Target Start/End: Complemental strand, 228936 - 228769
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    ||||||||| |||||||||||||||||||||||||||| ||||||| | |||||||| || |||| ||||   ||||| ||||| |||||||| ||||||    
T  228936 gagaggcaaagagatacctcttgtgaaagtcgtttgggaaggagcgactggtgaaagcttaacgtgggagccagagagtaagatactggagtcttatcca 228837  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccct 183  Q
    || || |||  ||||| || ||| || ||||||||||| || ||||| ||||||| ||||||||||||    
T  228836 gagttgtttgcatgaggtaaattctcaaggacgaaaatcttataagttggggagagttgtaacgccct 228769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 17 - 183
Target Start/End: Original strand, 219831 - 219997
Alignment:
Q  17 agaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatccag 116  Q
    ||||||||||||||||||| |||| ||||||| ||||  |||||||| |||||||| || |||| |||| |||| ||||| ||||||||||| |||||||    
T  219831 agaggcaaggagatacctcatgtgcaagtcgtatgggacggagcggctggtgaaagcttaacgtgggagatggaaagcaaaatgctggagtcttatccag 219930  T
Q  117 atttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccct 183  Q
    | || |||  | |||||| |||||||||||| |||||  | ||||| ||||||| ||||||||||||    
T  219931 agttgtttgcacgagataaattttcgaggacaaaaatcctataagttggggagagttgtaacgccct 219997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0737 (Bit Score: 67; Significance: 8e-30; HSPs: 1)
Name: scaffold0737
Description:

Target: scaffold0737; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 16 - 182
Target Start/End: Original strand, 395 - 561
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    ||||||||| ||||||||||||||||||||||||||||  |||||| | |||||||| ||||||| |||| | ||||| |||||| |||| || ||||||    
T  395 gagaggcaaagagatacctcttgtgaaagtcgtttgggacggagcgactggtgaaagcttgacgtgggagctagagagtaagatgttggaatcttatcca 494  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccc 182  Q
    || || ||    |||| || |||||||||||||||||| || ||||| ||||||| |||||||||||    
T  495 gagttgttcgcttgaggtaaattttcgaggacgaaaatcttataagttggggagagttgtaacgccc 561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0676 (Bit Score: 67; Significance: 8e-30; HSPs: 1)
Name: scaffold0676
Description:

Target: scaffold0676; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 16 - 182
Target Start/End: Complemental strand, 5907 - 5741
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    |||||||||||||||||||||||||| ||||||| |||  |||||| | | | |||| ||||||| |||| | ||||| |||||||||||||| ||||||    
T  5907 gagaggcaaggagatacctcttgtgagagtcgttggggacggagcgactgttaaaagcttgacgtgggagcttgagagtaagatgctggagtcttatcca 5808  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccc 182  Q
    || || |||   |||| || |||||||||||||||||| || ||||| ||||||| |||||||||||    
T  5807 gagttgtttgcttgaggtaaattttcgaggacgaaaatcttataagttggggagagttgtaacgccc 5741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0454 (Bit Score: 67; Significance: 8e-30; HSPs: 1)
Name: scaffold0454
Description:

Target: scaffold0454; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 16 - 182
Target Start/End: Complemental strand, 6831 - 6665
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    ||||||||||||||||||||| |||| ||||||||||   | |||| | |||||||| ||||||| |||| | ||||| |||||||||||||| ||||||    
T  6831 gagaggcaaggagatacctctcgtgagagtcgtttggacggaagcgactggtgaaagcttgacgtgggagcttgagagtaagatgctggagtcttatcca 6732  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccc 182  Q
    || || ||    |||| || |||||||||||||||||| || ||||||||||||| |||||||||||    
T  6731 gagttgttcgcttgaggtaaattttcgaggacgaaaatcttttaagtgggggagagttgtaacgccc 6665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0206 (Bit Score: 67; Significance: 8e-30; HSPs: 1)
Name: scaffold0206
Description:

Target: scaffold0206; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 16 - 182
Target Start/End: Complemental strand, 30804 - 30638
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    ||||||||||||||||||||| |||| |||||||| ||  |||||| | |||||||| || |||| |||| | ||||| |||||||||||||| ||||||    
T  30804 gagaggcaaggagatacctctcgtgagagtcgtttcggacggagcgactggtgaaagcttaacgtgggagctagagagtaagatgctggagtcttatcca 30705  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccc 182  Q
    || || ||| || ||| || | |||||||||||||||| || ||||| ||||||| |||||||||||    
T  30704 gagttgtttgaacgaggtaaactttcgaggacgaaaatcttataagttggggagagttgtaacgccc 30638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0198 (Bit Score: 67; Significance: 8e-30; HSPs: 1)
Name: scaffold0198
Description:

Target: scaffold0198; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 16 - 182
Target Start/End: Complemental strand, 27860 - 27694
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    ||||||||||||||||||||||||||  ||||||||||  |||||| | |||||||| ||||||| |||| | ||||| |||||| ||||||| ||||||    
T  27860 gagaggcaaggagatacctcttgtgagggtcgtttgggacggagcgactggtgaaagcttgacgtgggagcttgagagtaagatgttggagtcttatcca 27761  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccc 182  Q
    || || |||  ||||| || |||||||||||||||||| || ||||| ||||||  |||||| ||||    
T  27760 gagttgtttgcatgaggtaaattttcgaggacgaaaatcttttaagttggggagtgttgtaatgccc 27694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 67; Significance: 8e-30; HSPs: 2)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 16 - 182
Target Start/End: Original strand, 33986 - 34152
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    |||||||||||||||||| ||||| | |||||||||||   ||||| | |||||||| || |||| |||| | ||||| |||||||||||||| ||||||    
T  33986 gagaggcaaggagataccccttgttatagtcgtttgggctagagcgactggtgaaagcttaacgtgggagcttgagagtaagatgctggagtcttatcca 34085  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccc 182  Q
    || || |||   |||| || |||||||||||||||||| || ||||||||||||| |||||||||||    
T  34086 gagttgtttgcttgaggtaaattttcgaggacgaaaatcttttaagtgggggagagttgtaacgccc 34152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 16 - 182
Target Start/End: Complemental strand, 8489 - 8323
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    |||||||||||| ||||| ||||| | ||| |||||||  |||||| | |||||||| ||||||| |||| | ||||| |||||||||||||| ||||||    
T  8489 gagaggcaaggaaataccccttgttagagttgtttgggctggagcgactggtgaaagcttgacgtgggagcttgagagtaagatgctggagtcttatcca 8390  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccc 182  Q
    || || |||   |||| || |||||||||||||||||| || | ||| ||||||| |||||||||||    
T  8389 gagttgtttgcttgaggtaaattttcgaggacgaaaatctttttagtaggggagagttgtaacgccc 8323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 67; Significance: 8e-30; HSPs: 2)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 16 - 182
Target Start/End: Original strand, 40202 - 40368
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    |||||||||||||||||||||||||| |||||||||||  |||||| |  ||||||| ||||||| |||| | ||||| ||||| |||||||| ||||||    
T  40202 gagaggcaaggagatacctcttgtgagagtcgtttgggatggagcgactagtgaaagcttgacgtgggagctagagagtaagatactggagtcttatcca 40301  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccc 182  Q
    || || ||    |||| || |||||||||||||||||| || ||||| ||||||| |||||||||||    
T  40302 gagttgttcgcttgaggtaaattttcgaggacgaaaatcttataagttggggagagttgtaacgccc 40368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 16 - 182
Target Start/End: Complemental strand, 65299 - 65134
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    |||||||||||||||||| ||||| | |||||||||||  |||||| |  | ||||| ||||||| |||| | ||||| |||||||||||||| | ||||    
T  65299 gagaggcaaggagataccccttgttagagtcgtttgggctggagcgactagagaaagcttgacgtgggagcttgagagtaagatgctggagtcttgtcca 65200  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccc 182  Q
     | || |||   |||| || ||||||||||| |||||| || ||||||||||||| |||||||||||    
T  65199 tagttgtttgcttgaggtaaattttcgagga-gaaaatcttttaagtgggggagagttgtaacgccc 65134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 67; Significance: 8e-30; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 26 - 204
Target Start/End: Original strand, 127622 - 127800
Alignment:
Q  26 gagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatccagatttatttc 125  Q
    ||||||||||||||||||||||||||||  |||||| | |||||||| || |||| |||||||||||| || ||| |||| || |||||||| || |||     
T  127622 gagatacctcttgtgaaagtcgtttgggacggagcgactggtgaaagcttaacgtgggagttggagagtaatatgttggaatcttatccagagttgtttg 127721  T
Q  126 aatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccctaatttattatttagttatttt 204  Q
     | ||| || |||||||||||||||||| || ||||| ||||||| |||||||||||   || |||||||| |||||||    
T  127722 caagaggtaaattttcgaggacgaaaatgttataagttggggagagttgtaacgcccactttgattatttaattatttt 127800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0761 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0761
Description:

Target: scaffold0761; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 16 - 153
Target Start/End: Original strand, 5022 - 5159
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    ||||||||||||||||||||| |||| |||||||||| | |||||| | |||||||| ||||||| |||| | ||||| |||||||||||||| ||||||    
T  5022 gagaggcaaggagatacctctcgtgagagtcgtttggagcggagcgactggtgaaagcttgacgtgggagcttgagagtaagatgctggagtcttatcca 5121  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaat 153  Q
    || || |||  ||||| || ||||||||||||||||||    
T  5122 gagttgtttgcatgaggtaaattttcgaggacgaaaat 5159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 16 - 184
Target Start/End: Original strand, 39303 - 39470
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    |||||| || |||||||||||||||| |||||||||||| |||||| | |||||||||||||| | |||| ||||||| ||||||| |||||| ||||||    
T  39303 gagaggtaaagagatacctcttgtgagagtcgtttggggtggagcgactggtgaaagtttgacttgggagctggagagtaagatgcgggagtcttatcca 39402  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgcccta 184  Q
    || || ||||  |||| ||   ||||||||||| ||||  ||||||| ||||||| |||||||||||||    
T  39403 gagttgtttccttgaggtaagatttcgaggacg-aaattctctaagttggggagagttgtaacgcccta 39470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 65; Significance: 1e-28; HSPs: 3)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 16 - 204
Target Start/End: Complemental strand, 2115 - 1927
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    ||||||||| ||||||||||||||||||||||||||||  |||||||| |||||||| || |||| |||  ||||||| |||||| ||||||| ||||||    
T  2115 gagaggcaaagagatacctcttgtgaaagtcgtttgggacggagcggctggtgaaagcttaacgtgggaaatggagagtaagatgttggagtcttatcca 2016  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccctaatttattatttagttatttt 204  Q
    || || |||   |||| || ||||||||||||||||||  | |||||  |||||  ||||||||||||  || |||||||  |||||||    
T  2015 gagttgtttgtgtgaggtaaattttcgaggacgaaaatcctataagttcgggagcgttgtaacgccctctttaattatttgattatttt 1927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 16 - 184
Target Start/End: Original strand, 42746 - 42913
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    |||||||||||| |||||||| ||||| || |||||||| ||||   ||||||| ||||| || | |||| ||||||| ||||||| |||||||||||||    
T  42746 gagaggcaaggatatacctctagtgaaggttgtttggggtggagtaaccggtgagagttttacttgggagctggagagtaagatgcgggagtcgtatcca 42845  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgcccta 184  Q
    || || ||| | |||| ||   ||| ||||||| ||||  ||||||| ||||||| |||||||||||||    
T  42846 gagttgtttgattgaggtaagattttgaggacg-aaattctctaagttggggagagttgtaacgcccta 42913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 16 - 184
Target Start/End: Original strand, 47812 - 47979
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    |||||||||||| |||||||| ||||| || |||||||| ||||   ||||||| ||||| || | |||| ||||||| ||||||| |||||||||||||    
T  47812 gagaggcaaggatatacctctagtgaaggttgtttggggtggagtaaccggtgagagttttacttgggagctggagagtaagatgcgggagtcgtatcca 47911  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgcccta 184  Q
    || || ||| | |||| ||   ||| ||||||| ||||  ||||||| ||||||| |||||||||||||    
T  47912 gagttgtttgattgaggtaagattttgaggacg-aaattctctaagttggggagagttgtaacgcccta 47979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0894 (Bit Score: 64; Significance: 5e-28; HSPs: 1)
Name: scaffold0894
Description:

Target: scaffold0894; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 16 - 183
Target Start/End: Complemental strand, 1032 - 865
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    ||||||||| |||||||||||||||| ||||||||| |  |||||| | ||| |||| || |||| |||| | ||||| ||||||||||| || ||||||    
T  1032 gagaggcaatgagatacctcttgtgagagtcgtttgagacggagcgactggtaaaagcttaacgtgggagctagagagtaagatgctggaatcttatcca 933  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccct 183  Q
    || || |||  ||||| || |||||||||||||||||| || ||||| ||||||| ||||||||||||    
T  932 gagttgtttgcatgaggtaaattttcgaggacgaaaatcttataagttggggagagttgtaacgccct 865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0396 (Bit Score: 64; Significance: 5e-28; HSPs: 1)
Name: scaffold0396
Description:

Target: scaffold0396; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 16 - 183
Target Start/End: Complemental strand, 3925 - 3758
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    |||||||||||||||||||||||||||||| ||||||   ||||||||  ||||||| || |||| |||| | ||||| ||||| |||||||| ||||||    
T  3925 gagaggcaaggagatacctcttgtgaaagttgtttggcacggagcggctagtgaaagcttaacgtgggagctagagagaaagatactggagtcttatcca 3826  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccct 183  Q
    || || |||  ||||| |||||||||||| | ||||||  | ||||| ||||||| ||||||||||||    
T  3825 gagttgtttgcatgaggtacattttcgagaatgaaaatcctataagttggggagagttgtaacgccct 3758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0358 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0358
Description:

Target: scaffold0358; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 16 - 182
Target Start/End: Complemental strand, 6166 - 6000
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    |||||||| ||||||||||||||||| |||||||||||  |||||| | |||||||| ||||||| |||| | ||||| ||||||||| |||| ||||||    
T  6166 gagaggcatggagatacctcttgtgagagtcgtttgggacggagcgactggtgaaagcttgacgtgggagctagagagtaagatgctgaagtcttatcca 6067  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccc 182  Q
    || || ||    |||| || |||||||||||||||||| || ||||| ||||||| |||||| ||||    
T  6066 gagttgttcgcttgaggtaaattttcgaggacgaaaatcttataagttggggagagttgtaatgccc 6000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 63; Significance: 2e-27; HSPs: 2)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 16 - 182
Target Start/End: Complemental strand, 13932 - 13766
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    ||||||||| |||||||||||||||| |||||||||||  |||||| | |||||||| ||||||| |||| | ||||| || ||||||||||| ||||||    
T  13932 gagaggcaaagagatacctcttgtgagagtcgtttgggacggagcgactggtgaaagcttgacgtgggagctagagagtaaaatgctggagtcttatcca 13833  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccc 182  Q
    || || |||   |||| || |||||||||||| ||||| || |||||  |||||| |||||||||||    
T  13832 gagttgtttgcttgaggtaaattttcgaggacaaaaatcttataagttagggagagttgtaacgccc 13766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 117
Target Start/End: Complemental strand, 31303 - 31202
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    |||||||||||| |||||||| ||||| || |||||||| ||||   |||||||||||||||| | || ||| ||||| ||||||| | |||| ||||||    
T  31303 gagaggcaaggatatacctctagtgaaggtggtttggggtggagtaaccggtgaaagtttgacttgggggttagagagtaagatgcggaagtcttatcca 31204  T
Q  116 ga 117  Q
    ||    
T  31203 ga 31202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 15 - 181
Target Start/End: Complemental strand, 5115 - 4949
Alignment:
Q  15 agagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcc 114  Q
    ||||||||||||||||||||||||||| |||||| ||||  |||||| | |||||||| ||  ||| |||| | ||||| ||||||||||| || |||||    
T  5115 agagaggcaaggagatacctcttgtgatagtcgtgtgggacggagcgactggtgaaagcttaccgtgggagctagagagtaagatgctggaatcttatcc 5016  T
Q  115 agatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgcc 181  Q
    ||| || |||  ||||| || ||||||||||||| |||| || ||||| ||||||| ||||||||||    
T  5015 agagttgtttgcatgaggtaaattttcgaggacggaaattttataagttggggagagttgtaacgcc 4949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 60; Significance: 1e-25; HSPs: 2)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 16 - 183
Target Start/End: Complemental strand, 14770 - 14603
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    ||||||||||||||||||||||||||| |||||||||| ||||||| | |||||||||||  ||| |||| | ||||| |||||||||||||| ||||||    
T  14770 gagaggcaaggagatacctcttgtgaaggtcgtttgggaaggagcgactggtgaaagtttatcgtgggagctagagagtaagatgctggagtcttatcca 14671  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccct 183  Q
    || || |||   | || || |||||| ||||| |||||  | ||||| || |||| ||||||||||||    
T  14670 gagttgtttgcttaaggtaaattttctaggactaaaatcctataagttggagagagttgtaacgccct 14603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 163 - 215
Target Start/End: Complemental strand, 110270 - 110218
Alignment:
Q  163 gggggagaattgtaacgccctaatttattatttagttattttatcgagtttag 215  Q
    |||| ||| |||||| |||||| ||||||||||| ||||||||| ||||||||    
T  110270 ggggtagagttgtaatgccctattttattatttatttattttattgagtttag 110218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0546 (Bit Score: 59; Significance: 5e-25; HSPs: 1)
Name: scaffold0546
Description:

Target: scaffold0546; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 16 - 182
Target Start/End: Original strand, 4818 - 4984
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    |||||||||||| ||||| ||||| | ||| |||||||  |||||| | |||||||| ||||||| |||| | ||||| |||||||||||||| ||||||    
T  4818 gagaggcaaggaaataccccttgttagagttgtttgggctggagcgactggtgaaagcttgacgtgggagcttgagagtaagatgctggagtcttatcca 4917  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccc 182  Q
    || || |||   |||| || |||||||||||||||||| || | ||| ||||||| |||||||||||    
T  4918 gagttgtttgcttgaggtaaattttcgaggacgaaaatctttttagtaggggagagttgtaacgccc 4984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 59; Significance: 5e-25; HSPs: 4)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 16 - 178
Target Start/End: Complemental strand, 447952 - 447790
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    ||||||||| |||||||||||||||||||||||||||| ||||||||| ||| |||| || | || |||| | ||||| ||||||||| |||| ||||||    
T  447952 gagaggcaaagagatacctcttgtgaaagtcgtttgggaaggagcggctggtaaaagcttaatgtgggagctagagagtaagatgctgaagtcttatcca 447853  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaac 178  Q
    || || |||  | ||| || |||||||||||| |||||  | ||||| ||||||| |||||||    
T  447852 gagttgtttgcacgaggtaaattttcgaggacaaaaatcctataagttggggagagttgtaac 447790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 183
Target Start/End: Complemental strand, 162006 - 161838
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    |||| ||||||||||||| ||||||| ||| ||||||  ||||||| | |||||| | || |||| |||| | ||| | ||||||||||| || ||||||    
T  162006 gagaagcaaggagataccacttgtgagagttgtttggaaaggagcgactggtgaacgcttaacgtgggagctagagcgtaagatgctggaatcctatcca 161907  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaag-tgggggagaattgtaacgccct 183  Q
    || ||  ||   |||| || |||||||||||||||||| || |||| ||||||||| ||||||||||||    
T  161906 gagttggttgcttgaggtaaattttcgaggacgaaaatcttataagttgggggagagttgtaacgccct 161838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 138 - 206
Target Start/End: Complemental strand, 30818 - 30750
Alignment:
Q  138 tttcgaggacgaaaatattctaagtgggggagaattgtaacgccctaatttattatttagttattttat 206  Q
    |||||||||||||| | || |||| |||  ||| ||||||||||||| |||| |||||| |||||||||    
T  30818 tttcgaggacgaaattcttttaagggggatagagttgtaacgccctattttaatatttatttattttat 30750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 138 - 206
Target Start/End: Complemental strand, 36125 - 36057
Alignment:
Q  138 tttcgaggacgaaaatattctaagtgggggagaattgtaacgccctaatttattatttagttattttat 206  Q
    |||||||||||||| | || |||| |||  ||| ||||||||||||| |||| |||||| |||||||||    
T  36125 tttcgaggacgaaattcttttaagggggatagagttgtaacgccctattttaatatttatttattttat 36057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 58; Significance: 2e-24; HSPs: 3)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 16 - 184
Target Start/End: Original strand, 29182 - 29351
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    ||||||||||||||||||||| |||||||| ||||||||||||||  | |||||||||||| | | |||| ||||||| |||||||||||||| |||||     
T  29182 gagaggcaaggagatacctctagtgaaagttgtttggggaggagcaactggtgaaagtttggcatgggagctggagagtaagatgctggagtcttatccg 29281  T
Q  116 gatttatttcaatgagat-acattttcgaggacgaaaatattctaagtgggggagaattgtaacgcccta 184  Q
     | || |||   |||| | | ||||||||||||||||||  | ||||| | ||||| |||||||||||||    
T  29282 aagttgtttgtttgaggtaatattttcgaggacgaaaattctttaagttgcggagagttgtaacgcccta 29351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 16 - 184
Target Start/End: Original strand, 41173 - 41342
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    ||||||||||||||||||||| |||||||| ||||||||||||||  | |||||||||||| | | |||| ||||||| |||||||||||||| |||||     
T  41173 gagaggcaaggagatacctctagtgaaagttgtttggggaggagcaactggtgaaagtttggcatgggagctggagagtaagatgctggagtcttatccg 41272  T
Q  116 gatttatttcaatgagat-acattttcgaggacgaaaatattctaagtgggggagaattgtaacgcccta 184  Q
     | || |||   |||| | | ||||||||||||||||||  | ||||| | ||||| |||||||||||||    
T  41273 aagttgtttgtttgaggtaatattttcgaggacgaaaattctttaagttgcggagagttgtaacgcccta 41342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 89 - 182
Target Start/End: Original strand, 63385 - 63478
Alignment:
Q  89 gagagcaagatgctggagtcgtatccagatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccc 182  Q
    ||||| |||||||||||||| |||||||| || |||  ||||| || |||||||||||||||||| || ||||| ||||||| |||||||||||    
T  63385 gagagtaagatgctggagtcttatccagagttgtttgcatgaggtaaattttcgaggacgaaaatcttataagttggggagagttgtaacgccc 63478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0282 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0282
Description:

Target: scaffold0282; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 16 - 204
Target Start/End: Original strand, 16829 - 17017
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    |||||||||||||||||||||||||||||||||||||| |||||| || |||||||| || || | |||| | || || ||||| |||||||| | ||||    
T  16829 gagaggcaaggagatacctcttgtgaaagtcgtttgggaaggagccgctggtgaaagcttaacttgggagctagaaagtaagatactggagtcttttcca 16928  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccctaatttattatttagttatttt 204  Q
    || || |||  ||||| || |||||||||||| |||||  | |||||  |||||| ||||||| ||||  || |||||||  |||||||    
T  16929 gagttgtttgcatgaggtaaattttcgaggacaaaaatcctataagttagggagagttgtaactccctctttgattatttgattatttt 17017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1102 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold1102
Description:

Target: scaffold1102; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 171 - 254
Target Start/End: Original strand, 1613 - 1696
Alignment:
Q  171 attgtaacgccctaatttattatttagttattttatcgagtttagtgtcattttgaataatttatgtgaataattgcgatgtgt 254  Q
    |||||||||||||| ||| ||||||| |||||||||||||||||||||| ||||| ||||||||| |||||||||| |||||||    
T  1613 attgtaacgccctattttgttatttatttattttatcgagtttagtgtctttttgcataatttatttgaataattgtgatgtgt 1696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0089
Description:

Target: scaffold0089; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 16 - 114
Target Start/End: Original strand, 17126 - 17224
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcc 114  Q
    |||||| || |||||||||||||||| |||||||||||| |||||| | |||||||||||||| | |||| ||||||| ||||||| ||||||||||||    
T  17126 gagaggtaaagagatacctcttgtgagagtcgtttggggtggagcgactggtgaaagtttgacttgggagctggagagtaagatgcgggagtcgtatcc 17224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 55; Significance: 1e-22; HSPs: 2)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 16 - 182
Target Start/End: Original strand, 37159 - 37325
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    |||||||| ||||||||||||||||| |||||||||||  |||||| |  ||||||| ||||||| || | | ||||| |||||| ||||||| ||||||    
T  37159 gagaggcagggagatacctcttgtgagagtcgtttgggacggagcgactagtgaaagcttgacgtgggggcttgagagtaagatgttggagtcttatcca 37258  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccc 182  Q
    || || |||   |||| || ||||| |||||| ||||| || ||||| ||||||| |||||||||||    
T  37259 gagttgtttgcttgaggtaaatttttgaggacaaaaatcttataagttggggagagttgtaacgccc 37325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 117
Target Start/End: Original strand, 19155 - 19252
Alignment:
Q  20 ggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatccaga 117  Q
    |||||||| ||||| ||| ||| |||||||||||  |||||| |  ||||||||||||| |||||| ||||||| ||||||| ||| || ||||||||    
T  19155 ggcaaggaaataccccttttgagagtcgtttgggacggagcgacttgtgaaagtttgacttaggagctggagagtaagatgcgggattcttatccaga 19252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1355 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold1355
Description:

Target: scaffold1355; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 19 - 180
Target Start/End: Complemental strand, 566 - 405
Alignment:
Q  19 aggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatccagat 118  Q
    |||||| |||||||||||||||| ||||||||||| | ||||| | ||||||||  | |||| |||| | ||||| ||||||||||| || ||||||||     
T  566 aggcaaagagatacctcttgtgagagtcgtttgggaatgagcgactggtgaaagcctaacgtgggagctagagagtaagatgctggaatcttatccagag 467  T
Q  119 ttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgc 180  Q
     | |||   |||| || |||||||||||||||||| || ||||| ||||||| |||||||||    
T  466 atgtttgcttgaggtaaattttcgaggacgaaaatcttttaagttggggagagttgtaacgc 405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0249 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 16 - 184
Target Start/End: Original strand, 5415 - 5582
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    |||||||||||| |||||||| |||||||| |||||||||||||   | |||||||||||||| | |||| ||||||| ||||||| |||| | ||||||    
T  5415 gagaggcaaggatatacctctagtgaaagttgtttggggaggagtaactggtgaaagtttgacttgggagctggagagtaagatgcgggagacatatcca 5514  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgcccta 184  Q
    || || |||   |||| ||   ||||||||||| ||||  ||||||| ||||||| |||||||||||||    
T  5515 gagttgtttgcttgaggtaatatttcgaggacg-aaattctctaagttggggagagttgtaacgcccta 5582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0052 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0052
Description:

Target: scaffold0052; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 38 - 182
Target Start/End: Complemental strand, 11788 - 11644
Alignment:
Q  38 gtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatccagatttatttcaatgagatacat 137  Q
    |||| ||||||||||   |||||| | |||||||| ||||||| |||| | ||||| |||||||||||||| |||||||| || |||   |||| || ||    
T  11788 gtgagagtcgtttggtcgggagcgactggtgaaagcttgacgtgggagcttgagagtaagatgctggagtcttatccagagttgtttgcttgaggtaaat 11689  T
Q  138 tttcgaggacgaaaatattctaagtgggggagaattgtaacgccc 182  Q
    ||||||||||||||||  | ||||||||||||| |||||||||||    
T  11688 tttcgaggacgaaaatcctttaagtgggggagagttgtaacgccc 11644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 16 - 184
Target Start/End: Original strand, 5331 - 5498
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    |||||||||||| |||||||| ||||| ||  ||||||| ||||   ||||||| |||||||| | |||| ||||||| ||||||| |||||||||||||    
T  5331 gagaggcaaggatatacctctagtgaaggttttttggggtggagtaaccggtgagagtttgacttgggagctggagagtaagatgcaggagtcgtatcca 5430  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgcccta 184  Q
    || || ||| | |||| ||   ||||||||||| ||||  ||||||| ||||||| |||||||||||||    
T  5431 gagttgtttgattgaggtaagatttcgaggacg-aaattctctaagttggggagagttgtaacgcccta 5498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 184
Target Start/End: Original strand, 14320 - 14486
Alignment:
Q  17 agaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatccag 116  Q
    ||||||||||| |||||||| ||||| || |||||||||||||   | ||| | |||||||| | |||| ||||||| ||||||| ||| || |||||||    
T  14320 agaggcaaggatatacctctagtgaaggttgtttggggaggagtaactggttagagtttgacttgggagctggagagtaagatgcgggattcttatccag 14419  T
Q  117 atttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgcccta 184  Q
    | || ||| | |||| ||   |||||||||||||| | |  ||| | ||||||| |||||||||||||    
T  14420 agttgtttgattgaggtaagatttcgaggacgaaattctg-taatttggggagagttgtaacgcccta 14486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0924 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: scaffold0924
Description:

Target: scaffold0924; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 17 - 184
Target Start/End: Complemental strand, 3783 - 3617
Alignment:
Q  17 agaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatccag 116  Q
    ||||| ||||| |||||||| ||||| || |||||||| ||||   |||||||||||||||| | |||| ||||||| ||||||| |||||| |||||||    
T  3783 agaggtaaggatatacctctagtgaaggttgtttggggtggagtaaccggtgaaagtttgacttgggagctggagagtaagatgcaggagtcttatccag 3684  T
Q  117 atttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgcccta 184  Q
    | || ||| | |||| ||   ||||||||||| ||||  ||||||| ||||||| |||||||||||||    
T  3683 agttgtttgattgaggtaatatttcgaggacg-aaattctctaagttggggagagttgtaacgcccta 3617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0556 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: scaffold0556
Description:

Target: scaffold0556; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 16 - 183
Target Start/End: Original strand, 3640 - 3806
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    |||||||||||| |||||||| ||||| || |||||||| ||||   ||||||| |||||||| |||||| ||||||| ||||||| |||||||||||||    
T  3640 gagaggcaaggatatacctctagtgaaggttgtttggggtggagtaaccggtgagagtttgacttaggagctggagagtaagatgcgggagtcgtatcca 3739  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccct 183  Q
    || || |||   |||| ||   |||||| |||| ||||  ||||||| ||||||| ||||||||||||    
T  3740 gagttgtttgtttgaggtaatatttcgatgacg-aaattctctaagttggggagagttgtaacgccct 3806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: scaffold0333
Description:

Target: scaffold0333; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 16 - 183
Target Start/End: Complemental strand, 15386 - 15219
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    |||||| || |||||||||| ||||||||||||||||| ||||||| |  | ||||| || |||| |||| | ||||| ||||||||||| || ||||||    
T  15386 gagaggaaaagagatacctcctgtgaaagtcgtttgggaaggagcgactagcgaaagcttaacgtgggagctagagagtaagatgctggaatcttatcca 15287  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccct 183  Q
    || || |||  ||||| || ||||||||||| ||| || || ||||| ||||||| |||||| |||||    
T  15286 gagttgtttgcatgaggtaaattttcgaggatgaatatcttataagttggggagagttgtaatgccct 15219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0320 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: scaffold0320
Description:

Target: scaffold0320; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 16 - 111
Target Start/End: Complemental strand, 2485 - 2390
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgta 111  Q
    |||||| ||||||||||||||||||| |||||||||||| |||||| | ||||||| |||||| | |||| ||||||| ||||||| |||||||||    
T  2485 gagaggtaaggagatacctcttgtgagagtcgtttggggtggagcgactggtgaaattttgacttgggagctggagagtaagatgcgggagtcgta 2390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 31 - 182
Target Start/End: Complemental strand, 10809 - 10658
Alignment:
Q  31 acctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatccagatttatttcaatga 130  Q
    ||||||||||| ||||||||||| ||||||| | |||||||| || |||| |||| | ||||| ||||||||||| || ||| || | || |||   |||    
T  10809 acctcttgtgagagtcgtttgggaaggagcgactggtgaaagcttaacgtgggagctagagagtaagatgctggaatcttatacaaagttgtttgcttga 10710  T
Q  131 gatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccc 182  Q
    | || |||||||||||||||||| || ||||| ||||||| |||||||||||    
T  10709 ggtaaattttcgaggacgaaaatcttataagttggggagagttgtaacgccc 10658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 16 - 111
Target Start/End: Complemental strand, 248506 - 248411
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgta 111  Q
    |||||||||||||||||||||||||| |||||||||||  |||||| |  ||||||||||||| | |||| ||||||| ||||||| |||||||||    
T  248506 gagaggcaaggagatacctcttgtgagagtcgtttgggatggagcgactagtgaaagtttgacttgggagctggagagtaagatgcgggagtcgta 248411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 16 - 182
Target Start/End: Complemental strand, 898 - 732
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    ||||||||| || |||||||||||||||||||||||||  |||||| | |||| ||| |||| || |||| | ||||| |||||||| || || ||||||    
T  898 gagaggcaaagaaatacctcttgtgaaagtcgtttgggatggagcgactggtgcaagattgaagtgggagctagagagtaagatgctagaatcttatcca 799  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccc 182  Q
     | || |||  ||||| || |||||  ||||||||||| || ||||| ||||||| |||||||||||    
T  798 cagttgtttgcatgaggtaaattttttaggacgaaaatcttataagttggggagagttgtaacgccc 732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0324 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0324
Description:

Target: scaffold0324; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 16 - 182
Target Start/End: Complemental strand, 16850 - 16684
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    ||||||||| |||||||||||||||| |||||||||||  ||||||   |||||||| || |||| |||| | ||||| ||||||| ||| || ||||||    
T  16850 gagaggcaatgagatacctcttgtgagagtcgtttgggacggagcgattggtgaaagcttaacgtgggagctagagagtaagatgcaggaatcttatcca 16751  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccc 182  Q
    || || |||   |||| || |||||||||||||||||| || ||| | |||| || |||||||||||    
T  16750 gagttgtttgcttgaggtaaattttcgaggacgaaaatcttataaattggggtgagttgtaacgccc 16684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 16 - 178
Target Start/End: Original strand, 1106 - 1268
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    ||||||||||||||||||||| |||| |||||||||||  |||||| | |||||||| ||||| | | || | ||||| |||||||||||||| ||||||    
T  1106 gagaggcaaggagatacctctggtgagagtcgtttgggacggagcgactggtgaaagcttgacatggaagctagagagtaagatgctggagtcttatcca 1205  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaac 178  Q
    || || |||   |||| || |||||  |||| |||||| || ||||| ||||||| |||||||    
T  1206 gagttgtttgcttgaggtaaattttttaggatgaaaatcttataagttggggagagttgtaac 1268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 16 - 114
Target Start/End: Complemental strand, 42676 - 42578
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcc 114  Q
    |||||||||||| ||||||||||||  |||||||||||  |||||| | |||||||||||||| | |||| ||||||| ||||||| ||||||||||||    
T  42676 gagaggcaaggaaatacctcttgtgtgagtcgtttgggatggagcgactggtgaaagtttgacttgggagctggagagtaagatgcaggagtcgtatcc 42578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 56 - 182
Target Start/End: Original strand, 12764 - 12890
Alignment:
Q  56 ggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatccagatttatttcaatgagatacattttcgaggacgaaaatat 155  Q
    |||||| | |||||||| ||||||| |||| | ||||| |||||| ||||||| |||||||| || |||   ||||||| |||||||||||||||||| |    
T  12764 ggagcgactggtgaaagcttgacgtgggagctagagagtaagatgttggagtcttatccagagttgtttgcttgagataaattttcgaggacgaaaatct 12863  T
Q  156 tctaagtgggggagaattgtaacgccc 182  Q
    | ||||| ||||||| |||||||||||    
T  12864 tataagttggggagagttgtaacgccc 12890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0395
Description:

Target: scaffold0395; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 16 - 184
Target Start/End: Original strand, 6312 - 6480
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    |||||||||||| |||||||| ||||| || |||||||||||||   | |||||||||||||| | |||| ||||||| |||||||| ||||| ||||||    
T  6312 gagaggcaaggatatacctctagtgaaggttgtttggggaggagtaacgggtgaaagtttgacttgggagctggagagtaagatgcttgagtcttatcca 6411  T
Q  116 gatttatttcaatg-agatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgcccta 184  Q
    || || |||   || || || | ||||||||||| ||||  ||||||| ||||||| |||||||||||||    
T  6412 gagttgtttgcttgaaggtaaaatttcgaggacg-aaattctctaagttggggagagttgtaacgcccta 6480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 50; Significance: 1e-19; HSPs: 4)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 16 - 117
Target Start/End: Original strand, 32141 - 32242
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    |||||||||||||||||||||||||| |||||||||||  |||||| | ||| |||| ||||||| |||| | ||||| |||||| ||||||| ||||||    
T  32141 gagaggcaaggagatacctcttgtgagagtcgtttgggacggagcgactggtaaaagcttgacgtgggagctagagagtaagatgatggagtcttatcca 32240  T
Q  116 ga 117  Q
    ||    
T  32241 ga 32242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 20 - 117
Target Start/End: Complemental strand, 35944 - 35847
Alignment:
Q  20 ggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatccaga 117  Q
    |||||||| ||||| ||||||| |||||||||||  |||||| | |||||||||||||| | |||| ||||||| ||||||| ||| || ||||||||    
T  35944 ggcaaggaaataccccttgtgagagtcgtttgggacggagcgactggtgaaagtttgacttgggagctggagagtaagatgcgggattcttatccaga 35847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 101
Target Start/End: Complemental strand, 43394 - 43313
Alignment:
Q  20 ggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgc 101  Q
    |||||||| ||||| ||||||| |||||||||||  ||| || | |||||||||||||| |||||| ||||||| |||||||    
T  43394 ggcaaggaaataccccttgtgagagtcgtttgggacggaacgactggtgaaagtttgacttaggagctggagagtaagatgc 43313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 115
Target Start/End: Complemental strand, 20011 - 19916
Alignment:
Q  20 ggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    |||||||| ||||| ||||||| |||||||||||  |||||| | |||||||||||||  | |||| ||||||| ||||||| ||| || ||||||    
T  20011 ggcaaggaaataccccttgtgagagtcgtttgggacggagcgactggtgaaagtttgaattgggagctggagagtaagatgcgggattcttatcca 19916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1032 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold1032
Description:

Target: scaffold1032; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 16 - 184
Target Start/End: Original strand, 2278 - 2445
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    |||||||||||| |||||||| ||||| || |||||||| ||||   |||||||||||||||| | |||| ||||||| ||||||| |||||| |||||     
T  2278 gagaggcaaggatatacctctagtgaaggttgtttggggtggagtaaccggtgaaagtttgacttgggagctggagagtaagatgcaggagtcttatcct 2377  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgcccta 184  Q
    || || |||   |||| ||   ||||||||||| ||||  ||||||| ||||||| |||||||||||||    
T  2378 gagttgtttgcttgaggtaatatttcgaggacg-aaattctctaagttggggagagttgtaacgcccta 2445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0947 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0947
Description:

Target: scaffold0947; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 16 - 184
Target Start/End: Original strand, 2844 - 3011
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    |||||||||||| |||||||| ||||| || |||||||| ||||   || ||||||||||||| | |||| ||||||| ||||||| |||||||||||||    
T  2844 gagaggcaaggatatacctctagtgaaggttgtttggggtggagtcacctgtgaaagtttgacttgggagctggagagtaagatgcgggagtcgtatcca 2943  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgcccta 184  Q
    || || |||   |||| ||   ||||||||| | ||||  ||||||| ||||||| |||||||||||||    
T  2944 gagttgtttgtttgaggtaagatttcgaggatg-aaattctctaagttggggagagttgtaacgcccta 3011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0298 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0298
Description:

Target: scaffold0298; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 16 - 184
Target Start/End: Complemental strand, 19876 - 19709
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    |||||||||||| |||||||| ||||| || |||||||| ||||   ||||||| |||||||| | |||| ||||||| |||||||  ||||||||||||    
T  19876 gagaggcaaggatatacctctagtgaaggttgtttggggtggagtaaccggtgagagtttgacttgggagctggagagtaagatgcgagagtcgtatcca 19777  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgcccta 184  Q
    || || ||| | |||| ||   ||||||||||| ||||  ||||||| ||| ||| |||||||||||||    
T  19776 gagttgtttgattgaggtaagatttcgaggacg-aaattctctaagttgggaagagttgtaacgcccta 19709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 16 - 184
Target Start/End: Original strand, 22089 - 22256
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    |||||||||||| |||||||| ||||| || ||||||||  |||   ||||||| |||||||| | |||| ||||||| ||||||| ||||||||||||     
T  22089 gagaggcaaggatatacctctagtgaaggttgtttggggtcgagtaaccggtgagagtttgacttgggagctggagagtaagatgcgggagtcgtatccg 22188  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgcccta 184  Q
    || ||||||   |||| ||   ||||||||||| ||||  ||||||| ||||||| |||||||||||||    
T  22189 gagttatttgcttgaggtaagatttcgaggacg-aaattctctaagttggggagatttgtaacgcccta 22256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203 (Bit Score: 49; Significance: 4e-19; HSPs: 2)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 16 - 184
Target Start/End: Original strand, 14664 - 14831
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    |||||||||||| |||||||| ||||| || |||||||| ||||   ||||||| |||||||| | |||| ||||||| ||||||| |||||||||||||    
T  14664 gagaggcaaggatatacctctagtgaaggttgtttggggtggagtaaccggtgagagtttgacttgggagctggagagtaagatgcgggagtcgtatcca 14763  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgcccta 184  Q
    || || ||  | |||| ||   |||| |||||| ||||  ||||||| ||||||| |||||||||||||    
T  14764 gagttgttcaattgaggtaagatttcaaggacg-aaattctctaagttggggagagttgtaacgcccta 14831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 184
Target Start/End: Original strand, 9290 - 9457
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    |||||||||||| |||||||| ||||| || |||||||| ||||   ||||||| ||||| || | |||| ||||||| ||||||| |||||||||||||    
T  9290 gagaggcaaggatatacctctagtgaaggttgtttggggtggagtaaccggtgagagtttaacttgggagctggagagtaagatgcgggagtcgtatcca 9389  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgcccta 184  Q
    || || ||  | |||| ||   |||| |||||| ||||  ||||||| ||||||| |||||||||||||    
T  9390 gagttgttcaattgaggtaagatttcaaggacg-aaattctctaagttggggagagttgtaacgcccta 9457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 16 - 184
Target Start/End: Complemental strand, 45737 - 45570
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    |||||||||||| |||||| | ||||| || |||||||| ||||   ||||||| |||||||| | |||| ||||||| ||||||| |||||||||||||    
T  45737 gagaggcaaggatatacctttagtgaaggttgtttggggtggagtaaccggtgagagtttgacttgggagctggagagtaagatgcgggagtcgtatcca 45638  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgcccta 184  Q
    || || ||| | |||| ||   |||||||||||||| | || ||| | ||||||| |||||||||||||    
T  45637 gagttgtttgattgaggtaagatttcgaggacgaaattctt-taatttggggagagttgtaacgcccta 45570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 49; Significance: 4e-19; HSPs: 2)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 16 - 184
Target Start/End: Complemental strand, 10781 - 10614
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    |||||||||||| |||||||| ||||| || |||||||| ||||   ||||||| |||||||| | |||| ||||||| |||||||  ||||||||||||    
T  10781 gagaggcaaggatatacctctagtgaaggttgtttggggtggagtaaccggtgagagtttgacttgggagctggagagtaagatgcgagagtcgtatcca 10682  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgcccta 184  Q
    || || ||| | |||| ||   ||||||||||| ||||  ||||||| ||| ||| |||||||||||||    
T  10681 gagttgtttgattgaggtaagatttcgaggacg-aaattctctaagttgggaagagttgtaacgcccta 10614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 16 - 177
Target Start/End: Original strand, 812 - 972
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    |||||||||||| |||||||| ||||| || |||||||| ||||   | ||||| |||||||| | |||| ||||||| ||||||| |||||| ||||||    
T  812 gagaggcaaggatatacctctagtgaaggttgtttggggtggagtaactggtgagagtttgacttgggagctggagagtaagatgcgggagtcttatcca 911  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaa 177  Q
    || || ||| | |||| ||   ||||||||||| ||||  ||||||| ||||||| ||||||    
T  912 gagttgtttgattgaggtaagatttcgaggacg-aaattctctaagttggggagagttgtaa 972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 49; Significance: 4e-19; HSPs: 2)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 16 - 184
Target Start/End: Original strand, 26278 - 26445
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    |||||||||||| |||||||| ||||| || |||||||| ||||   ||||||| |||||| | | |||| ||||||| ||||||| |||||||||||||    
T  26278 gagaggcaaggatatacctctagtgaaggttgtttggggtggagtaaccggtgagagtttgtcttgggagctggagagtaagatgcgggagtcgtatcca 26377  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgcccta 184  Q
    || || |||   |||| ||   ||||||||||| ||||  ||||||| ||||||| |||||||||||||    
T  26378 gagttgtttgtttgaggtaagatttcgaggacg-aaattctctaagttggggagagttgtaacgcccta 26445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 115
Target Start/End: Complemental strand, 16569 - 16470
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    |||||| || |||||||||||||||| |||||||||||| |||||| | || |||||||| || | |||| ||||||| ||||||| |||||||||||||    
T  16569 gagaggtaaagagatacctcttgtgagagtcgtttggggtggagcgactggagaaagttttacttgggagctggagagtaagatgcgggagtcgtatcca 16470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 49; Significance: 4e-19; HSPs: 2)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 16 - 184
Target Start/End: Complemental strand, 136012 - 135845
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    |||||||||||| |||||||| ||||| || |||||||| ||||   | |||||||||||||| | |||| ||||||||||||||| | ||||||||||     
T  136012 gagaggcaaggatatacctctagtgaaggttgtttggggtggagtaactggtgaaagtttgacttgggagctggagagcaagatgcggcagtcgtatccg 135913  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgcccta 184  Q
    || || |||   |||| ||   ||||||||||| ||||  ||||||| ||||||| |||||||||||||    
T  135912 gagttgtttgcttgaggtaagatttcgaggacg-aaattctctaagttggggagagttgtaacgcccta 135845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 215
Target Start/End: Original strand, 11644 - 11686
Alignment:
Q  173 tgtaacgccctaatttattatttagttattttatcgagtttag 215  Q
    |||||||||||| ||||||||||| ||||||||| ||||||||    
T  11644 tgtaacgccctattttattatttatttattttattgagtttag 11686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0093 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0093
Description:

Target: scaffold0093; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 111
Target Start/End: Complemental strand, 26154 - 26059
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgta 111  Q
    |||||| || |||||||||||||||| | |||||||||| |||||| | |||||||||||||| | |||| ||||||| ||||||| |||||||||    
T  26154 gagaggtaaagagatacctcttgtgagattcgtttggggtggagcgactggtgaaagtttgacttgggagctggagagtaagatgcgggagtcgta 26059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0093; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 45 - 111
Target Start/End: Complemental strand, 36793 - 36727
Alignment:
Q  45 tcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgta 111  Q
    |||||||||| |||||| | |||||||||||||| | |||| ||||||| ||||||| |||||||||    
T  36793 tcgtttggggtggagcgactggtgaaagtttgacttgggagctggagagtaagatgcgggagtcgta 36727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1939 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold1939
Description:

Target: scaffold1939; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 173 - 254
Target Start/End: Complemental strand, 566 - 484
Alignment:
Q  173 tgtaacgccctaatttattatttagttattttatcgagtttagtgtc-attttgaataatttatgtgaataattgcgatgtgt 254  Q
    |||||||||||| |||||||||||  |||||||||||||||||||||  ||||| ||||||||| |||||||||| |||||||    
T  566 tgtaacgccctattttattatttaaatattttatcgagtttagtgtcttttttgtataatttatttgaataattgtgatgtgt 484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0507 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 16 - 117
Target Start/End: Complemental strand, 6870 - 6769
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    ||||||||| |||||||||||||||||||| |||| ||  |||| ||| ||||||||||| ||||  ||| | ||||| |||||||||||||| ||||||    
T  6870 gagaggcaaagagatacctcttgtgaaagttgtttaggacggagtggctggtgaaagtttaacgtgagagctagagagtaagatgctggagtcttatcca 6771  T
Q  116 ga 117  Q
    ||    
T  6770 ga 6769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0403 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0403
Description:

Target: scaffold0403; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 66 - 182
Target Start/End: Complemental strand, 6258 - 6142
Alignment:
Q  66 gtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatccagatttatttcaatgagatacattttcgaggacgaaaatattctaagtggg 165  Q
    ||||||| ||||||| |||| | ||||| |||||||||||||| |||||||| || |||   |||| || ||||| |||||||||||| || ||||| ||    
T  6258 gtgaaagcttgacgtgggagctagagagtaagatgctggagtcttatccagagttgtttgcttgaggtaaatttttgaggacgaaaatcttataagttgg 6159  T
Q  166 ggagaattgtaacgccc 182  Q
    ||||| |||||||||||    
T  6158 ggagagttgtaacgccc 6142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0244 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0244
Description:

Target: scaffold0244; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 184
Target Start/End: Complemental strand, 1316 - 1149
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    |||||||||||| |||||||| ||||| || |||||||| ||||   |||||||||||||||| | |||| ||||||| ||||||| |||||| |||||     
T  1316 gagaggcaaggacatacctctagtgaaggttgtttggggtggagtaaccggtgaaagtttgacttgggagctggagagtaagatgcgggagtcttatccg 1217  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgcccta 184  Q
    || || |||   |||| ||   ||||||||||| ||||  || |||| ||||||| |||||||||||||    
T  1216 gagttgtttgcttgaggtaatatttcgaggacg-aaattctccaagttggggagagttgtaacgcccta 1149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 184
Target Start/End: Original strand, 34090 - 34257
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    |||||| || |||||||| ||||||| |||||||||||| |||||| | || |||||||| || | |||| |||| || ||||||| ||||||||| |||    
T  34090 gagaggtaaagagataccgcttgtgagagtcgtttggggtggagcgactggagaaagtttaacttgggagctggaaagtaagatgcgggagtcgtaccca 34189  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgcccta 184  Q
    || || |||   |||| ||   ||||||||||| ||||  ||||||| ||||||| |||||||||||||    
T  34190 gagttgtttgtttgaggtaagatttcgaggacg-aaatcctctaagttggggagagttgtaacgcccta 34257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 17 - 93
Target Start/End: Complemental strand, 3032 - 2956
Alignment:
Q  17 agaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagag 93  Q
    |||||||| ||||||||||||||||||||| |||||| ||||||| | |||||||| || |||| ||||||||||||    
T  3032 agaggcaaagagatacctcttgtgaaagtcatttgggaaggagcgactggtgaaagcttaacgtgggagttggagag 2956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 127 - 183
Target Start/End: Complemental strand, 2947 - 2891
Alignment:
Q  127 atgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccct 183  Q
    ||||| || ||||||||||||||||||  | ||||| ||||||| ||||||||||||    
T  2947 atgaggtatattttcgaggacgaaaattctttaagttggggagagttgtaacgccct 2891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 184
Target Start/End: Original strand, 60653 - 60820
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    |||||||||||| |||||||| ||||| || |||||||| ||||   |||||||||||||||| | |||| |||| || ||||||| |||||| ||||||    
T  60653 gagaggcaaggatatacctctagtgaaggttgtttggggtggagtaaccggtgaaagtttgacttgggagctggaaagtaagatgcgggagtcttatcca 60752  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgcccta 184  Q
    || || | |   |||| ||   ||||||||||| ||||  ||||||| ||||||| |||||||||||||    
T  60753 gagttgtatgcttgaggtaatatttcgaggacg-aaattctctaagttggggagagttgtaacgcccta 60820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 45; Significance: 1e-16; HSPs: 3)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 17 - 117
Target Start/End: Complemental strand, 37094 - 36994
Alignment:
Q  17 agaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatccag 116  Q
    ||||||||||| |||||||| ||||| || |||||||||||||   | |||||||||||||| | |||| ||||||| ||||||| |||||| |||||||    
T  37094 agaggcaaggatatacctctagtgaaggttgtttggggaggagtaactggtgaaagtttgacatgggagctggagagtaagatgcgggagtcttatccag 36995  T
Q  117 a 117  Q
    |    
T  36994 a 36994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 138 - 215
Target Start/End: Complemental strand, 22614 - 22537
Alignment:
Q  138 tttcgaggacgaaaatattctaagtgggggagaattgtaacgccctaatttattatttagttattttatcgagtttag 215  Q
    |||||||||||||| | || |||| |||| ||| ||||||||||||| |||| |||||| || |||||| ||||||||    
T  22614 tttcgaggacgaaattcttttaaggggggtagagttgtaacgccctattttaatatttatttcttttattgagtttag 22537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #3
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 53
Target Start/End: Complemental strand, 26735 - 26698
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggg 53  Q
    |||| ||||||||||||||||||||| |||||||||||    
T  26735 gagaagcaaggagatacctcttgtgagagtcgtttggg 26698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 16 - 115
Target Start/End: Original strand, 3681 - 3780
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    ||||||||| || |||||||| ||||| || |||||||| ||||   |||||||||||||||| | |||| ||||||| ||||||| |||||||||||||    
T  3681 gagaggcaatgatatacctctagtgaaggttgtttggggtggagtaaccggtgaaagtttgacttgggagctggagagtaagatgcgggagtcgtatcca 3780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 17 - 184
Target Start/End: Original strand, 11153 - 11319
Alignment:
Q  17 agaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatccag 116  Q
    ||||| ||||||||| |||| || ||||| ||||||||||||||  |  ||||| ||||||| | |||| ||||||| |||||||||||||| |||||||    
T  11153 agaggtaaggagatatctctagtaaaagttgtttggggaggagcatctagtgaatgtttgacatgggagctggagagtaagatgctggagtcttatccag 11252  T
Q  117 atttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgcccta 184  Q
    | || |||   |||| ||   ||||||||||| ||||  ||||||| ||||||| |||||||| ||||    
T  11253 agttgtttgcttgaggtaatatttcgaggacg-aaattctctaagttggggagagttgtaacgtccta 11319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 44; Significance: 4e-16; HSPs: 3)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 89 - 215
Target Start/End: Original strand, 36831 - 36958
Alignment:
Q  89 gagagcaagatgctggagtcgtatccagatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccctaattt 188  Q
    ||||| |||||||||||||| |||||||| || |||   |||| || ||||||||||||||||||  | ||||| ||||||| ||||||||||||| ||     
T  36831 gagagtaagatgctggagtcttatccagagttgtttgcttgaggtaaattttcgaggacgaaaatcctataagttggggagagttgtaacgccctatttg 36930  T
Q  189 attatttagttat-tttatcgagtttag 215  Q
    |||||||  |||| ||||| ||||||||    
T  36931 attatttgattatatttatagagtttag 36958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 72 - 184
Target Start/End: Complemental strand, 148432 - 148321
Alignment:
Q  72 gtttgacgtaggagttggagagcaagatgctggagtcgtatccagatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaa 171  Q
    ||||||| | |||| ||||||| ||||||| ||||||||||||||| || ||| | |||| ||   ||||||||||| ||||  ||||||| |||||||     
T  148432 gtttgacttgggagctggagagtaagatgcgggagtcgtatccagagttgtttgattgaggtaagatttcgaggacg-aaattctctaagttggggagag 148334  T
Q  172 ttgtaacgcccta 184  Q
    |||||||||||||    
T  148333 ttgtaacgcccta 148321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 16 - 184
Target Start/End: Original strand, 196097 - 196264
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    |||||||||||| ||||||||  |||| || |||||||| ||||   | ||||| |||||||| | |||| ||||||| ||||||| ||| |||||||||    
T  196097 gagaggcaaggatatacctctactgaaggttgtttggggtggagtaactggtgagagtttgacttgggagctggagagtaagatgcgggattcgtatcca 196196  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgcccta 184  Q
    || || ||| | |||| ||   |||||||||| |||||  ||||| |  |||||| |||||||||||||    
T  196197 gagttgtttgattgaggtaagatttcgaggac-aaaattctctaaattagggagagttgtaacgcccta 196264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0585 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0585
Description:

Target: scaffold0585; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 16 - 117
Target Start/End: Original strand, 7449 - 7550
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    |||||||||||| ||| |||| ||||| || |||||||||||||   | |||||||||||||| | |||| ||||||| |||||| ||||||| ||||||    
T  7449 gagaggcaaggatataactctagtgaaggttgtttggggaggagtaacaggtgaaagtttgacatgggagctggagagtaagatgttggagtcttatcca 7548  T
Q  116 ga 117  Q
    ||    
T  7549 ga 7550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0101 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 2)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 89 - 182
Target Start/End: Original strand, 7689 - 7782
Alignment:
Q  89 gagagcaagatgctggagtcgtatccagatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccc 182  Q
    ||||| |||||||||||||| |||||||| || |||  ||||  || |||||||||||||||||| || ||||| ||||||| |||||||||||    
T  7689 gagagtaagatgctggagtcttatccagagttgtttgcatgaagtaaattttcgaggacgaaaatcttataagttggggagagttgtaacgccc 7782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0101; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 52
Target Start/End: Original strand, 7629 - 7665
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttgg 52  Q
    |||||||||||||||||||||||||| ||||||||||    
T  7629 gagaggcaaggagatacctcttgtgagagtcgtttgg 7665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 19 - 184
Target Start/End: Original strand, 52279 - 52443
Alignment:
Q  19 aggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatccagat 118  Q
    ||||||||| |||||||| ||||| || ||||||||||| |   |||||||||||||||| | |||| ||||||| ||||||| |||||| ||||| ||     
T  52279 aggcaaggatatacctctagtgaaggttgtttggggaggtgtaaccggtgaaagtttgacttgggagctggagagtaagatgcaggagtcttatcctgag 52378  T
Q  119 ttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgcccta 184  Q
    || |||   |||| ||   ||||||||||| ||||  ||||||| || |||| |||||||||||||    
T  52379 ttgtttgcttgaggtaatatttcgaggacg-aaattctctaagttggagagagttgtaacgcccta 52443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0309 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0309
Description:

Target: scaffold0309; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 17 - 181
Target Start/End: Complemental strand, 9690 - 9527
Alignment:
Q  17 agaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatccag 116  Q
    ||||||||||| |||||||| ||||| || |||||||| | ||   |||||||||||||||| | |||| ||||||| ||||||| |||||| ||||| |    
T  9690 agaggcaaggatatacctctagtgaaggttgtttggggcgaagtaaccggtgaaagtttgacttgggagctggagagtaagatgcgggagtcttatccgg 9591  T
Q  117 atttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgcc 181  Q
    | || |||   |||| ||   ||||||||||| ||||  ||||||| ||||||| ||||||||||    
T  9590 agttgtttgcttgaggtaatatttcgaggacg-aaattctctaagttggggagagttgtaacgcc 9527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 16 - 184
Target Start/End: Complemental strand, 13979 - 13812
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    |||||||||||| |||||||| ||||| || ||||||||||| |   |||||||||||||||| | |||| ||||||| ||||||| | |||| ||||      
T  13979 gagaggcaaggatatacctctagtgaaggttgtttggggaggtgtaaccggtgaaagtttgacttgggagctggagagtaagatgcagaagtcttatcat 13880  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgcccta 184  Q
    || || |||  |||||  |   ||||||||||| ||||  ||||||| ||||||| |||||||||||||    
T  13879 gagttgtttgcatgaggaaatatttcgaggacg-aaattctctaagttggggagagttgtaacgcccta 13812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 198 - 254
Target Start/End: Original strand, 5311 - 5367
Alignment:
Q  198 ttattttatcgagtttagtgtcattttgaataatttatgtgaataattgcgatgtgt 254  Q
    |||||||||||||||||||||| ||||| ||||||||| |||||||||| |||||||    
T  5311 ttattttatcgagtttagtgtctttttgtataatttatttgaataattgtgatgtgt 5367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0483 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0483
Description:

Target: scaffold0483; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 187
Target Start/End: Original strand, 10496 - 10666
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    |||||| || |||||||||||||||| ||| |||||||| ||| || | |||||||||||||| | |||| |||| || |||||||  || ||||||||     
T  10496 gagaggtaaagagatacctcttgtgagagttgtttggggtggatcgactggtgaaagtttgacatgggagctggaaagtaagatgcaagaatcgtatcct 10595  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccctaatt 187  Q
    || || |||   |||| ||   ||||||||||| | ||  ||||||| ||||||| ||||||||||||||||    
T  10596 gagttgtttgtttgaggtaagatttcgaggacg-atattctctaagttggggagagttgtaacgccctaatt 10666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0878 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0878
Description:

Target: scaffold0878; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 138 - 224
Target Start/End: Original strand, 3202 - 3288
Alignment:
Q  138 tttcgaggacgaaaatattctaagtgggggagaattgtaacgccctaatttattatttagttattttatcgagtttagtgtcatttt 224  Q
    |||||||||| ||| | || ||||||||||| | ||||||| ||||| ||||||||||| ||||||||| |||||||| ||| ||||    
T  3202 tttcgaggacaaaattcttttaagtgggggatagttgtaacaccctattttattatttatttattttattgagtttagagtcttttt 3288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 16 - 114
Target Start/End: Complemental strand, 47020 - 46922
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcc 114  Q
    |||||||||||| |||||||| ||||| || |||||||| ||||   ||||||||||||||||   |||| ||||||| ||||||| |||||| |||||    
T  47020 gagaggcaaggatatacctctagtgaaggttgtttggggtggagtaaccggtgaaagtttgactcgggagctggagagtaagatgcgggagtcttatcc 46922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1550 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold1550
Description:

Target: scaffold1550; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 65 - 182
Target Start/End: Original strand, 4 - 121
Alignment:
Q  65 ggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatccagatttatttcaatgagatacattttcgaggacgaaaatattctaagtgg 164  Q
    |||||||| || |||| |||| | ||||| ||||||||||| || |||||||| || |||   |||| || |||||||||||||||||| || ||| | |    
T  4 ggtgaaagcttaacgtgggagctagagagtaagatgctggaatcttatccagagttgtttgcttgaggtaaattttcgaggacgaaaatcttataatttg 103  T
Q  165 gggagaattgtaacgccc 182  Q
    |||||| |||||||||||    
T  104 gggagagttgtaacgccc 121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0216 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0216
Description:

Target: scaffold0216; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 102 - 215
Target Start/End: Original strand, 7608 - 7720
Alignment:
Q  102 tggagtcgtatccagatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccctaatttattatttagttat 201  Q
    ||||||| |||||||| || |||   |||| || |||||||||||||||||| || ||||||||||||| |||||||||||   || |||| || |||||    
T  7608 tggagtcttatccagagttgtttgcttgaggtaaattttcgaggacgaaaatcttttaagtgggggagagttgtaacgcccactttaattaatt-gttat 7706  T
Q  202 tttatcgagtttag 215  Q
    || |||||||||||    
T  7707 ttaatcgagtttag 7720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 138 - 215
Target Start/End: Original strand, 12774 - 12851
Alignment:
Q  138 tttcgaggacgaaaatattctaagtgggggagaattgtaacgccctaatttattatttagttattttatcgagtttag 215  Q
    |||||||||||||| | || |||| |||| ||| ||||||||||||| ||||| ||||| ||||||||| ||||||||    
T  12774 tttcgaggacgaaattcttttaaggggggtagagttgtaacgccctattttatcatttatttattttattgagtttag 12851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0156 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 117
Target Start/End: Complemental strand, 27119 - 27018
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    |||||||||||| |||| ||| ||||| || |||||| | ||||   |||||||||||||||| | |||| ||||||| ||||||| |||||| ||||||    
T  27119 gagaggcaaggatatacttctagtgaaggttgtttggagtggagtaaccggtgaaagtttgacttgggagctggagagtaagatgcgggagtcttatcca 27020  T
Q  116 ga 117  Q
    ||    
T  27019 ga 27018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 117
Target Start/End: Complemental strand, 421 - 320
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    |||||| || |||||||||||||||| |||||||||| | |||||| |  |||||||||| || | |||| |||| || ||||||| |||||| ||||||    
T  421 gagaggtaatgagatacctcttgtgagagtcgtttggagtggagcgactagtgaaagtttaacttgggagctggaaagtaagatgcgggagtcttatcca 322  T
Q  116 ga 117  Q
    ||    
T  321 ga 320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0326 (Bit Score: 37; Significance: 0.000000000006; HSPs: 2)
Name: scaffold0326
Description:

Target: scaffold0326; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 16 - 184
Target Start/End: Original strand, 3768 - 3935
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    |||||||||||| |||||||| ||||| || |||||||| ||||    | ||||||||||||| | |||| ||||||| ||||||| |||||  |||||     
T  3768 gagaggcaaggatatacctctagtgaaggttgtttggggtggagtaatcagtgaaagtttgacttgggagctggagagtaagatgcgggagttttatcct 3867  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgcccta 184  Q
    || || |||   |||| ||   ||||||||||| ||||  ||||||| ||||||| |||||||||||||    
T  3868 gagttgtttgcttgaggtaatatttcgaggacg-aaattctctaagttggggagagttgtaacgcccta 3935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0326; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 16 - 184
Target Start/End: Original strand, 18950 - 19117
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    |||||||||||| |||||||| ||||| || |||||||| ||||    | ||||||||||||| | |||| ||||||| ||||||| |||||  |||||     
T  18950 gagaggcaaggatatacctctagtgaaggttgtttggggtggagtaatcagtgaaagtttgacttgggagctggagagtaagatgcgggagttttatcct 19049  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgcccta 184  Q
    || || |||   |||| ||   ||||||||||| ||||  ||||||| ||||||| |||||||||||||    
T  19050 gagttgtttgcttgaggtaatatttcgaggacg-aaattctctaagttggggagagttgtaacgcccta 19117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 37; Significance: 0.000000000006; HSPs: 3)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 16 - 184
Target Start/End: Original strand, 13602 - 13769
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    |||||||||||| |||| ||| ||||| || |||||||| ||||   | ||||||||||| || | |||| ||||||| ||||||| |||||| ||||||    
T  13602 gagaggcaaggatatacatctagtgaaggttgtttggggtggagtaactggtgaaagtttaacttgggagctggagagtaagatgcgggagtcttatcca 13701  T
Q  116 gatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgcccta 184  Q
    || || |||   |||| ||   |||||| |||| ||||  ||||||| ||||||| |||||||||||||    
T  13702 gagttgtttgcttgaggtaatatttcgacgacg-aaattctctaagttggggagagttgtaacgcccta 13769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 172 - 215
Target Start/End: Original strand, 32793 - 32836
Alignment:
Q  172 ttgtaacgccctaatttattatttagttattttatcgagtttag 215  Q
    ||||||||||||| ||||||||||| ||||||||| ||||||||    
T  32793 ttgtaacgccctattttattatttatttattttattgagtttag 32836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149; HSP #3
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 105 - 178
Target Start/End: Original strand, 34979 - 35051
Alignment:
Q  105 agtcgtatccagatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaac 178  Q
    |||| ||||||||||||||||  | || || ||||||||||||||||||  | ||||||||||||| |||||||    
T  34979 agtcctatccagatttatttccttcag-taaattttcgaggacgaaaattgtttaagtgggggagagttgtaac 35051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 37; Significance: 0.000000000006; HSPs: 3)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 74 - 182
Target Start/End: Original strand, 124815 - 124923
Alignment:
Q  74 ttgacgtaggagttggagagcaagatgctggagtcgtatccagatttatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaatt 173  Q
    ||||||| |||| | ||||| |||||||||||||| |||||| |  | |||   |||| || ||||| |||||||||||| || ||||||||||||| ||    
T  124815 ttgacgtgggagcttgagagtaagatgctggagtcttatccatagatgtttgcttgaggtaaatttttgaggacgaaaatcttttaagtgggggagagtt 124914  T
Q  174 gtaacgccc 182  Q
    |||||||||    
T  124915 gtaacgccc 124923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 111
Target Start/End: Complemental strand, 112452 - 112357
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgta 111  Q
    |||||| || |||||||||||||| | ||| |||||||| |||||  | ||||||||| | || | |||||||||||| |||||||| ||||||||    
T  112452 gagaggtaaagagatacctcttgtaagagttgtttggggtggagcaactggtgaaagtctaacttgggagttggagagtaagatgctagagtcgta 112357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #3
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 77
Target Start/End: Original strand, 117274 - 117335
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttga 77  Q
    ||||||||||||||||||||| |||| ||||||||||   |||||| | |||||||| ||||    
T  117274 gagaggcaaggagatacctctcgtgagagtcgtttggacgggagcgactggtgaaagcttga 117335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 173 - 243
Target Start/End: Original strand, 38129 - 38200
Alignment:
Q  173 tgtaacgccctaatttattatttagttattttatcgagtttagtgtcatttt-gaataatttatgtgaataa 243  Q
    |||||||||||| ||||||||||| |||||||||| ||||||||| | |||| | ||||||||| |||||||    
T  38129 tgtaacgccctattttattatttatttattttatcaagtttagtgcctttttggtataatttatttgaataa 38200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1243 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold1243
Description:

Target: scaffold1243; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 28 - 90
Target Start/End: Original strand, 268 - 330
Alignment:
Q  28 gatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttgga 90  Q
    ||||| |||||||||||||||||||| ||||||| | |||||||| || |||| |||||||||    
T  268 gatacatcttgtgaaagtcgtttgggaaggagcgactggtgaaagcttaacgtgggagttgga 330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0518 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0518
Description:

Target: scaffold0518; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 23 - 117
Target Start/End: Complemental strand, 10710 - 10616
Alignment:
Q  23 aaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatccaga 117  Q
    ||||| ||||| ||||||| |||| ||||||  |||||| | |||||||||||||| | |||||||||||| ||||||  ||| || ||||||||    
T  10710 aaggaaataccccttgtgagagtcttttgggacggagcgactggtgaaagtttgacttgggagttggagagtaagatgtgggattcttatccaga 10616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 173 - 219
Target Start/End: Original strand, 39794 - 39840
Alignment:
Q  173 tgtaacgccctaatttattatttagttattttatcgagtttagtgtc 219  Q
    |||||||||||| ||||||||||| ||||||||| ||||||||||||    
T  39794 tgtaacgccctattttattatttatttattttatagagtttagtgtc 39840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 184
Target Start/End: Complemental strand, 27408 - 27245
Alignment:
Q  20 ggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatccagatt 119  Q
    |||||||| |||||||| |||||  | || ||||| ||||   ||||||| |||||||| | |||| | ||||| ||||| |  |||||||||||||| |    
T  27408 ggcaaggatatacctctagtgaagattgtctggggtggagtaaccggtgagagtttgacttgggagctagagagtaagattcgagagtcgtatccagagt 27309  T
Q  120 tatttcaatgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgcccta 184  Q
    | ||| | |||||||   |||||  ||||||| | | |||||| ||||||| |||||||||||||    
T  27308 tgtttgattgagataagatttcggagacgaaattct-ctaagttggggagagttgtaacgcccta 27245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 173 - 215
Target Start/End: Original strand, 77600 - 77642
Alignment:
Q  173 tgtaacgccctaatttattatttagttattttatcgagtttag 215  Q
    |||||||||||| ||||||||||| ||||||||||||||||||    
T  77600 tgtaacgccctattttattatttatttattttatcgagtttag 77642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0574 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0574
Description:

Target: scaffold0574; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 117
Target Start/End: Original strand, 4552 - 4653
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcca 115  Q
    |||||||||||| |||||||| ||||| || ||||||||||| |   | ||||| |||||||| | |||| ||||||| ||||||| ||| || ||||||    
T  4552 gagaggcaaggatatacctctagtgaaggttgtttggggaggtgtaactggtgagagtttgacttgggagctggagagtaagatgcgggattcttatcca 4651  T
Q  116 ga 117  Q
    ||    
T  4652 ga 4653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 138 - 215
Target Start/End: Original strand, 8245 - 8321
Alignment:
Q  138 tttcgaggacgaaaatattctaagtgggggagaattgtaacgccctaatttattatttagttattttatcgagtttag 215  Q
    |||||||||||||| | || |||| |||| ||| ||||||||| ||| ||||||||||| ||||||||| ||||||||    
T  8245 tttcgaggacgaaattcttttaag-ggggtagagttgtaacgctctattttattatttatttattttattgagtttag 8321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 173 - 243
Target Start/End: Complemental strand, 3572 - 3500
Alignment:
Q  173 tgtaacgccctaatttattatttagttattttatcgagtttagtgtcatttt--gaataatttatgtgaataa 243  Q
    |||||||||| | ||||||||||| |||||||||||||||||||| | ||||  | ||||||||| |||||||    
T  3572 tgtaacgcccaattttattatttatttattttatcgagtttagtgccttttttggtataatttatttgaataa 3500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0177 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0177
Description:

Target: scaffold0177; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 85
Target Start/End: Original strand, 17748 - 17817
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggag 85  Q
    ||||||||||||| ||||||| |||| |||||||||||  |||||| | |||||||| ||||||| ||||    
T  17748 gagaggcaaggagttacctctcgtgagagtcgtttgggagggagcgactggtgaaagcttgacgtgggag 17817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 127 - 204
Target Start/End: Original strand, 10364 - 10441
Alignment:
Q  127 atgagatacattttcgaggacgaaaatattctaagtgggggagaattgtaacgccctaatttattatttagttatttt 204  Q
    ||||| |||||||||||||| ||||||  | ||||| ||||||| ||||||||||||| || |||||||  |||||||    
T  10364 atgaggtacattttcgaggatgaaaattctataagttggggagagttgtaacgccctatttaattatttgattatttt 10441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0385 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0385
Description:

Target: scaffold0385; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 173 - 224
Target Start/End: Complemental strand, 904 - 852
Alignment:
Q  173 tgtaacgccctaatttattatttagttattttatcgagtttag-tgtcatttt 224  Q
    |||||||||||| ||||||||||| ||||||||| |||||||| |||||||||    
T  904 tgtaacgccctattttattatttatttattttattgagtttagatgtcatttt 852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 171 - 215
Target Start/End: Original strand, 9346 - 9390
Alignment:
Q  171 attgtaacgccctaatttattatttagttattttatcgagtttag 215  Q
    |||||||||||||| ||||||||||| ||||||||| ||||||||    
T  9346 attgtaacgccctattttattatttatttattttattgagtttag 9390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 100
Target Start/End: Complemental strand, 96256 - 96176
Alignment:
Q  20 ggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatg 100  Q
    |||||||| |||||  | |||| |||||||||||| |||||| | |||||||||||||| | |||| |||| || ||||||    
T  96256 ggcaaggaaatacccttggtgagagtcgtttggggcggagcgactggtgaaagtttgacttgggagctggaaagtaagatg 96176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1160 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold1160
Description:

Target: scaffold1160; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 172 - 215
Target Start/End: Complemental strand, 954 - 911
Alignment:
Q  172 ttgtaacgccctaatttattatttagttattttatcgagtttag 215  Q
    ||||||||||||| ||||||||||| ||||||||| ||||||||    
T  954 ttgtaacgccctattttattatttatttattttattgagtttag 911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0853 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0853
Description:

Target: scaffold0853; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 172 - 215
Target Start/End: Original strand, 283 - 326
Alignment:
Q  172 ttgtaacgccctaatttattatttagttattttatcgagtttag 215  Q
    ||||||||||||| ||||||||||| ||||||||| ||||||||    
T  283 ttgtaacgccctattttattatttatttattttattgagtttag 326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0682 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0682
Description:

Target: scaffold0682; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 16 - 99
Target Start/End: Complemental strand, 84 - 1
Alignment:
Q  16 gagaggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagat 99  Q
    |||||| || |||||||||||||| | ||| |||||||| |||||| | |||||||||||||| | |||| |||| || |||||    
T  84 gagaggtaaagagatacctcttgtaagagttgtttggggtggagcgactggtgaaagtttgacttgggagctggaaagtaagat 1  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0450 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 138 - 213
Target Start/End: Original strand, 2179 - 2254
Alignment:
Q  138 tttcgaggacgaaaatattctaagtgggggagaattgtaacgccctaatttattatttagttattttatcgagttt 213  Q
    |||||||||||||| | || |||| |||| ||| ||||||||||||  || |||||||| ||||||||| ||||||    
T  2179 tttcgaggacgaaattcttttaaggggggtagagttgtaacgccctctttaattatttaattattttatagagttt 2254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0241 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0241
Description:

Target: scaffold0241; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 138 - 205
Target Start/End: Complemental strand, 3865 - 3799
Alignment:
Q  138 tttcgaggacgaaaatattctaagtgggggagaattgtaacgccctaatttattatttagttatttta 205  Q
    |||||||||||||| | || |||| |||| ||| ||||||||||||| ||||||||||| ||||||||    
T  3865 tttcgaggacgaaattcttttaag-ggggtagagttgtaacgccctattttattatttatttatttta 3799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0231 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 172 - 215
Target Start/End: Original strand, 16838 - 16881
Alignment:
Q  172 ttgtaacgccctaatttattatttagttattttatcgagtttag 215  Q
    ||||||||||||| ||||||||||| ||||||||| ||||||||    
T  16838 ttgtaacgccctattttattatttatttattttattgagtttag 16881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 172 - 215
Target Start/End: Complemental strand, 19903 - 19860
Alignment:
Q  172 ttgtaacgccctaatttattatttagttattttatcgagtttag 215  Q
    ||||||||||||| ||||||||||| ||||||||| ||||||||    
T  19903 ttgtaacgccctattttattatttatttattttattgagtttag 19860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0071 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 136 - 215
Target Start/End: Complemental strand, 15702 - 15623
Alignment:
Q  136 attttcgaggacgaaaatattctaagtgggggagaattgtaacgccctaatttattatttagttattttatcgagtttag 215  Q
    |||||| |||||||||||  | |||| |||||||| ||||||||||||  || |||||||| ||||||| | ||||||||    
T  15702 attttcaaggacgaaaattctataagcgggggagagttgtaacgccctctttaattatttacttattttctagagtttag 15623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0600 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0600
Description:

Target: scaffold0600; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 114
Target Start/End: Complemental strand, 1298 - 1204
Alignment:
Q  20 ggcaaggagatacctcttgtgaaagtcgtttggggaggagcggccggtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatcc 114  Q
    |||||||| |||||||| ||||| || |||||||||||||   | |||||||||||||| | |||| ||||||| | ||| | |||||| |||||    
T  1298 ggcaaggatatacctctagtgaaggttgtttggggaggagtaactggtgaaagtttgacttgggagctggagagtaggatacgggagtcttatcc 1204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0550 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0550
Description:

Target: scaffold0550; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 215
Target Start/End: Original strand, 5245 - 5287
Alignment:
Q  173 tgtaacgccctaatttattatttagttattttatcgagtttag 215  Q
    |||||||||||| ||||||||||| ||||||||| ||||||||    
T  5245 tgtaacgccctattttattatttatttattttattgagtttag 5287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0429 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0429
Description:

Target: scaffold0429; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 214
Target Start/End: Original strand, 1607 - 1685
Alignment:
Q  136 attttcgaggacgaaaatattctaagtgggggagaattgtaacgccctaatttattatttagttattttatcgagttta 214  Q
    ||||||||||||||||||  | ||||| ||||||| ||||||| ||||| || ||||||   ||||||||| |||||||    
T  1607 attttcgaggacgaaaattctataagttggggagagttgtaacaccctatttaattattagattattttattgagttta 1685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0414 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0414
Description:

Target: scaffold0414; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 215
Target Start/End: Original strand, 10419 - 10461
Alignment:
Q  173 tgtaacgccctaatttattatttagttattttatcgagtttag 215  Q
    |||||||||||| ||||||||||| ||||||||| ||||||||    
T  10419 tgtaacgccctattttattatttatttattttattgagtttag 10461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0407 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0407
Description:

Target: scaffold0407; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 215
Target Start/End: Original strand, 4281 - 4323
Alignment:
Q  173 tgtaacgccctaatttattatttagttattttatcgagtttag 215  Q
    |||||||||||| ||||||||||| ||||||||| ||||||||    
T  4281 tgtaacgccctattttattatttatttattttattgagtttag 4323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0407; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 215
Target Start/End: Original strand, 10747 - 10789
Alignment:
Q  173 tgtaacgccctaatttattatttagttattttatcgagtttag 215  Q
    |||||||||||| ||||||||||| ||||||||| ||||||||    
T  10747 tgtaacgccctattttattatttatttattttattgagtttag 10789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 215
Target Start/End: Complemental strand, 63136 - 63094
Alignment:
Q  173 tgtaacgccctaatttattatttagttattttatcgagtttag 215  Q
    |||||||||||| ||||||||||| ||||||||| ||||||||    
T  63136 tgtaacgccctattttattatttatttattttattgagtttag 63094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 215
Target Start/End: Complemental strand, 168220 - 168146
Alignment:
Q  141 cgaggacgaaaatattctaagtgggggagaattgtaacgccctaatttattatttagttattttatcgagtttag 215  Q
    |||| |||||| | || |||| |||| ||| || |||||||||| ||||||||||| ||||||||| ||||||||    
T  168220 cgagaacgaaattcttttaaggggggtagagttttaacgccctattttattatttatttattttattgagtttag 168146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0577 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0577
Description:

Target: scaffold0577; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 138 - 215
Target Start/End: Complemental strand, 9501 - 9425
Alignment:
Q  138 tttcgaggacgaaaatattctaagtgggggagaattgtaacgccctaatttattatttagttattttatcgagtttag 215  Q
    |||||||||||||| | || |||| |||| ||| ||||||||||||  || |||||||| ||||||||| ||||||||    
T  9501 tttcgaggacgaaattcttttaag-ggggtagagttgtaacgccctctttaattatttaattattttatagagtttag 9425  T

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Target: scaffold0447 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0447
Description:

Target: scaffold0447; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 138 - 215
Target Start/End: Complemental strand, 12902 - 12825
Alignment:
Q  138 tttcgaggacgaaaatattctaagtgggggagaattgtaacgccctaatttattatttagttattttatcgagtttag 215  Q
    |||||||||||||| | || |||  |||| ||| ||||||||||||  || |||||||| ||||||||| ||||||||    
T  12902 tttcgaggacgaaattcttttaatgggggtagagttgtaacgccctctttaattatttaattattttatagagtttag 12825  T

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Target: scaffold0383 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0383
Description:

Target: scaffold0383; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 138 - 215
Target Start/End: Complemental strand, 10897 - 10820
Alignment:
Q  138 tttcgaggacgaaaatattctaagtgggggagaattgtaacgccctaatttattatttagttattttatcgagtttag 215  Q
    |||||||||||||| | || |||  |||| ||| ||||||||||||  || |||||||| ||||||||| ||||||||    
T  10897 tttcgaggacgaaattcttttaatgggggtagagttgtaacgccctctttaattatttaattattttatagagtttag 10820  T

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Target: scaffold0323 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0323
Description:

Target: scaffold0323; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 66 - 151
Target Start/End: Complemental strand, 8736 - 8651
Alignment:
Q  66 gtgaaagtttgacgtaggagttggagagcaagatgctggagtcgtatccagatttatttcaatgagatacattttcgaggacgaaa 151  Q
    |||||||||| || | |||| ||||||| ||||||| ||||||||||||||| || ||| | |||| ||   ||||||||||||||    
T  8736 gtgaaagtttaacttgggagctggagagtaagatgcgggagtcgtatccagagttgtttgattgaggtaagatttcgaggacgaaa 8651  T

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Target: scaffold0116 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 171 - 223
Target Start/End: Original strand, 35108 - 35161
Alignment:
Q  171 attgtaacgccctaattta-ttatttagttattttatcgagtttagtgtcattt 223  Q
    |||||||||||||| |||| ||||||| ||||||||| |||||||| |||||||    
T  35108 attgtaacgccctattttatttatttaattattttattgagtttagagtcattt 35161  T

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Target: scaffold0609 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0609
Description:

Target: scaffold0609; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 136 - 204
Target Start/End: Complemental strand, 1058 - 991
Alignment:
Q  136 attttcgaggacgaaaatattctaagtgggggagaattgtaacgccctaatttattatttagttatttt 204  Q
    |||||||| |||||||||  | ||||| ||||||| |||||||||||||| |||||||||  |||||||    
T  1058 attttcgaagacgaaaattctttaagttggggagagttgtaacgccctaa-ttattattttattatttt 991  T

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Target: scaffold0509 (Bit Score: 29; Significance: 0.0000004; HSPs: 2)
Name: scaffold0509
Description:

Target: scaffold0509; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 171 - 215
Target Start/End: Original strand, 2145 - 2189
Alignment:
Q  171 attgtaacgccctaatttattatttagttattttatcgagtttag 215  Q
    |||||||||||||| |||| |||||| ||||||||| ||||||||    
T  2145 attgtaacgccctattttaatatttatttattttattgagtttag 2189  T

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Target: scaffold0509; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 171 - 215
Target Start/End: Original strand, 8573 - 8617
Alignment:
Q  171 attgtaacgccctaatttattatttagttattttatcgagtttag 215  Q
    |||||||||||||| |||| |||||| ||||||||| ||||||||    
T  8573 attgtaacgccctattttaatatttatttattttattgagtttag 8617  T

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Target: scaffold0328 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 171 - 211
Target Start/End: Original strand, 18139 - 18179
Alignment:
Q  171 attgtaacgccctaatttattatttagttattttatcgagt 211  Q
    |||||||||||||| ||||||||||| ||||||||| ||||    
T  18139 attgtaacgccctattttattatttatttattttattgagt 18179  T

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