View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF12660_low_51 (Length: 242)
Name: NF12660_low_51
Description: NF12660
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12660_low_51 |
 | |
|
| [»] scaffold0477 (1 HSPs) |
| |
|
| [»] chr6 (32 HSPs) |
| |
|
| [»] chr7 (1 HSPs) |
| |
|
| [»] scaffold0288 (1 HSPs) |
| | |
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Alignment Details
Target: scaffold0477 (Bit Score: 208; Significance: 1e-114; HSPs: 1)
Name: scaffold0477
Description:
Target: scaffold0477; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 3 - 242
Target Start/End: Complemental strand, 4852 - 4613
Alignment:
| Q |
3 |
aaccacgtttcatagaataaatcactttagtctagcattgtttaagcatgacctccttaatcactttgtccaagttcatgtatgaacagccacgaggact |
102 |
Q |
| |
|
||||||||||||||||||| || |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||| |
|
|
| T |
4852 |
aaccacgtttcatagaatatataactttaatctagcattgtttaagcatgacctccttaatcactttgtccaagttcatgtatgaacagccaccagaact |
4753 |
T |
|
| Q |
103 |
ggtgttctcctctgccttcttcttcaactccatggccttttgcctcatcttcattcctttatctcctgacatcaattcattgatcagattcgttaccttc |
202 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||| |
|
|
| T |
4752 |
ggtgttctcctctgccttcttcttcaactccatggccttttgcctcatcttcattcctttatctcccgacatcaattcattgatcatattcgttaccttc |
4653 |
T |
|
| Q |
203 |
tctctcgtcacattagtatcaatttccataccagtctccc |
242 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
4652 |
tctctcttcacattagtatcaatttccataccagtctccc |
4613 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 112; Significance: 1e-56; HSPs: 32)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 39 - 242
Target Start/End: Original strand, 4622144 - 4622347
Alignment:
| Q |
39 |
attgtttaagcatgacctccttaatcactttgtccaagttcatgtatgaacagccacgaggactggtgttctcctctgccttcttcttcaactccatggc |
138 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||| |||||||||| |||| ||| ||||| |||| |||||||||| ||||||||||||||| |
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|
| T |
4622144 |
attgtttaagcatgacctccttaataactttgtccaagttgttgtatgaacaaccaccagggctggtcgtctcatctgccttctccttcaactccatggc |
4622243 |
T |
|
| Q |
139 |
cttttgcctcatcttcattcctttatctcctgacatcaattcattgatcagattcgttaccttctctctcgtcacattagtatcaatttccataccagtc |
238 |
Q |
| |
|
|||||| ||||||||| ||||||||||||| ||||||||||||||||||||||||| |||| |||||| |||||||||||| ||||| || ||| || |
|
|
| T |
4622244 |
cttttgtctcatcttctttcctttatctcccgacatcaattcattgatcagattcgacacctcctctcttttcacattagtattgatttcgattccaatc |
4622343 |
T |
|
| Q |
239 |
tccc |
242 |
Q |
| |
|
|||| |
|
|
| T |
4622344 |
tccc |
4622347 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 3 - 242
Target Start/End: Complemental strand, 4256778 - 4256539
Alignment:
| Q |
3 |
aaccacgtttcatagaataaatcactttagtctagcattgtttaagcatgacctccttaatcactttgtccaagttcatgtatgaacagccacgaggact |
102 |
Q |
| |
|
|||||| ||||||||||||||| ||| || ||||| ||||||||||||||||||||||||| ||||||||||||||||| ||||| ||| || || |
|
|
| T |
4256778 |
aaccacatttcatagaataaattactataatctagtattgtttaagcatgacctccttaataactttgtccaagttcatcaatgaatgaccagctgggct |
4256679 |
T |
|
| Q |
103 |
ggtgttctcctctgccttcttcttcaactccatggccttttgcctcatcttcattcctttatctcctgacatcaattcattgatcagattcgttaccttc |
202 |
Q |
| |
|
|||||||| ||||| |||||||||||| |||||| ||||||||||||||||| ||||||| ||||| |||||||||||||||||||||||| |||| |
|
|
| T |
4256678 |
ggtgttcttctctgtcttcttcttcaattccatgaccttttgcctcatcttctttcctttttctcccgacatcaattcattgatcagattctccacctca |
4256579 |
T |
|
| Q |
203 |
tctctcgtcacattagtatcaatttccataccagtctccc |
242 |
Q |
| |
|
|||||| |||||||||||| ||||| || ||| |||||| |
|
|
| T |
4256578 |
tctctcttcacattagtattgatttcaattccaatctccc |
4256539 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 25 - 242
Target Start/End: Complemental strand, 4260298 - 4260081
Alignment:
| Q |
25 |
cactttagtctagcattgtttaagcatgacctccttaatcactttgtccaagttcatgtatgaacagccacgaggactggtgttctcctctgccttcttc |
124 |
Q |
| |
|
||||||| ||||| ||||||| |||||||||| |||||| ||||||||||||||||| ||||| | ||| |||||||||||||||||||||||| || |
|
|
| T |
4260298 |
cactttaatctagtattgtttgagcatgacctgcttaataactttgtccaagttcatcaatgaataaccagatggactggtgttctcctctgccttcctc |
4260199 |
T |
|
| Q |
125 |
ttcaactccatggccttttgcctcatcttcattcctttatctcctgacatcaattcattgatcagattcgttaccttctctctcgtcacattagtatcaa |
224 |
Q |
| |
|
|||||||||||| ||||||||||||||||| |||||| ||||||||||| | |||||||||||| |||| |||| ||||| |||||||||||| || |
|
|
| T |
4260198 |
ttcaactccatgaccttttgcctcatcttctttccttcttctcctgacataatttcattgatcagcttcgccacctcatctcttttcacattagtattaa |
4260099 |
T |
|
| Q |
225 |
tttccataccagtctccc |
242 |
Q |
| |
|
|||| || ||| |||||| |
|
|
| T |
4260098 |
tttcaattccaatctccc |
4260081 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 39 - 242
Target Start/End: Original strand, 4625953 - 4626156
Alignment:
| Q |
39 |
attgtttaagcatgacctccttaatcactttgtccaagttcatgtatgaacagccacgaggactggtgttctcctctgccttcttcttcaactccatggc |
138 |
Q |
| |
|
|||||||||||| ||| || ||||||| ||| |||| |||||||||||||| |||| ||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
4625953 |
attgtttaagcaagacatcattaatcagtttatccatattcatgtatgaacaaccaccgggactaatgttctcctctgccttcttcttcaactccatggc |
4626052 |
T |
|
| Q |
139 |
cttttgcctcatcttcattcctttatctcctgacatcaattcattgatcagattcgttaccttctctctcgtcacattagtatcaatttccataccagtc |
238 |
Q |
| |
|
|||||||||||||||| |||| |||||||||| ||||||| |||||||||| ||| |||| ||| ||| ||||||||| ||| |||||||| ||| || |
|
|
| T |
4626053 |
cttttgcctcatcttctttccgttatctcctgccatcaatgcattgatcagtttctctaccccctccctcttcacattagcatcgatttccattccaatc |
4626152 |
T |
|
| Q |
239 |
tccc |
242 |
Q |
| |
|
|||| |
|
|
| T |
4626153 |
tccc |
4626156 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 40 - 242
Target Start/End: Original strand, 4617025 - 4617227
Alignment:
| Q |
40 |
ttgtttaagcatgacctccttaatcactttgtccaagttcatgtatgaacagccacgaggactggtgttctcctctgccttcttcttcaactccatggcc |
139 |
Q |
| |
|
||||||||||| || |||||||| ||||||| |||||||||||||||||| |||| || || |||||||||||||||||||||||||||||||||||| |
|
|
| T |
4617025 |
ttgtttaagcaacacatccttaataactttgttcaagttcatgtatgaacaaccacctggtctagtgttctcctctgccttcttcttcaactccatggcc |
4617124 |
T |
|
| Q |
140 |
ttttgcctcatcttcattcctttatctcctgacatcaattcattgatcagattcgttaccttctctctcgtcacattagtatcaatttccataccagtct |
239 |
Q |
| |
|
|||||| |||| ||| ||||||||||||| | |||| |||||||||||| || | | || ||||||| ||||||| ||||| |||||||||||| ||| |
|
|
| T |
4617125 |
ttttgcttcattttctttcctttatctccggctatcacttcattgatcagctttgccaactcctctctcttcacattcgtatcgatttccataccaatct |
4617224 |
T |
|
| Q |
240 |
ccc |
242 |
Q |
| |
|
||| |
|
|
| T |
4617225 |
ccc |
4617227 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 39 - 231
Target Start/End: Original strand, 3171743 - 3171935
Alignment:
| Q |
39 |
attgtttaagcatgacctccttaatcactttgtccaagttcatgtatgaacagccacgaggactggtgttctcctctgccttcttcttcaactccatggc |
138 |
Q |
| |
|
|||||||||||| |||||||||||||||||| |||||||||||||||||||| |||| | || || | |||||||||||||||||||||||||||||| |
|
|
| T |
3171743 |
attgtttaagcaagacctccttaatcactttatccaagttcatgtatgaacaaccaccaaatcttgtatcctcctctgccttcttcttcaactccatggc |
3171842 |
T |
|
| Q |
139 |
cttttgcctcatcttcattcctttatctcctgacatcaattcattgatcagattcgttaccttctctctcgtcacattagtatcaatttccat |
231 |
Q |
| |
|
| |||||||||||||| ||||||| ||||| ||||||||| |||||||| ||| ||||| | ||||| | ||||| |||||||||||||| |
|
|
| T |
3171843 |
cctttgcctcatcttctttcctttctctcccaccatcaattcgttgatcagtttctctacctcccctctctttacattggtatcaatttccat |
3171935 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 21 - 228
Target Start/End: Original strand, 4516305 - 4516512
Alignment:
| Q |
21 |
aaatcactttagtctagcattgtttaagcatgacctccttaatcactttgtccaagttcatgtatgaacagccacgaggactggtgttctcctctgcctt |
120 |
Q |
| |
|
||||||||||| |||| |||||| |||| ||||||||||||||||| |||||||||| |||||||| |||| || || |||| |||||||||||| |
|
|
| T |
4516305 |
aaatcactttaatctaattttgtttgagcagcacctccttaatcactttttccaagttcacatatgaacaaccacctggtcttgtgtcctcctctgcctt |
4516404 |
T |
|
| Q |
121 |
cttcttcaactccatggccttttgcctcatcttcattcctttatctcctgacatcaattcattgatcagattcgttaccttctctctcgtcacattagta |
220 |
Q |
| |
|
||||||||| |||||||||||||||||||||||| ||||||||||||| ||| |||||||||||||| ||| |||| ||||||| ||||||| ||| |
|
|
| T |
4516405 |
cttcttcaattccatggccttttgcctcatcttctttcctttatctcccaccattaattcattgatcagcttctccacctcctctctcttcacattggta |
4516504 |
T |
|
| Q |
221 |
tcaatttc |
228 |
Q |
| |
|
|||||||| |
|
|
| T |
4516505 |
tcaatttc |
4516512 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 40 - 186
Target Start/End: Original strand, 4480696 - 4480842
Alignment:
| Q |
40 |
ttgtttaagcatgacctccttaatcactttgtccaagttcatgtatgaacagccacgaggactggtgttctcctctgccttcttcttcaactccatggcc |
139 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||||||||||||||||| |||| ||| || |||| |||||||||| |||||||||||||||||||| |
|
|
| T |
4480696 |
ttgtttaagcaagacctccttaatcactttgtccaagttcatgtatgaacaaccaccaggtcttgtgtcctcctctgccatcttcttcaactccatggcc |
4480795 |
T |
|
| Q |
140 |
ttttgcctcatcttcattcctttatctcctgacatcaattcattgat |
186 |
Q |
| |
|
|||||| |||||||| ||||||| ||||| || |||||||||||| |
|
|
| T |
4480796 |
ttttgcttcatcttctttcctttctctcccaccaacaattcattgat |
4480842 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 43 - 183
Target Start/End: Complemental strand, 4504523 - 4504383
Alignment:
| Q |
43 |
tttaagcatgacctccttaatcactttgtccaagttcatgtatgaacagccacgaggactggtgttctcctctgccttcttcttcaactccatggccttt |
142 |
Q |
| |
|
|||||||| ||| ||||||||||||||||||||||||||||||||||| |||| | | || |||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
4504523 |
tttaagcaagacgtccttaatcactttgtccaagttcatgtatgaacaaccaccaagtcttgtgtcctcctctgccttcttcttcaactccatggccttt |
4504424 |
T |
|
| Q |
143 |
tgcctcatcttcattcctttatctcctgacatcaattcatt |
183 |
Q |
| |
|
|||||||||||| ||||||| ||||| |||||||||||| |
|
|
| T |
4504423 |
tgcctcatcttctttcctttctctcccaccatcaattcatt |
4504383 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 43 - 242
Target Start/End: Complemental strand, 4490481 - 4490282
Alignment:
| Q |
43 |
tttaagcatgacctccttaatcactttgtccaagttcatgtatgaacagccacgaggactggtgttctcctctgccttcttcttcaactccatggccttt |
142 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||||||||||||| |||| | || |||| |||| |||||||||||||||||||| | |||||| |
|
|
| T |
4490481 |
tttaagcatgacatccttaatcactttgtccaagttcatgtatgaactaccaccgagtctcgtgtcctccgctgccttcttcttcaactccgtcgccttt |
4490382 |
T |
|
| Q |
143 |
tgcctcatcttcattcctttatctcctgacatcaattcattgatcagattcgttaccttctctctcgtcacattagtatcaatttccataccagtctccc |
242 |
Q |
| |
|
|||||||||||| ||||||| ||||| |||||||||||||||||| ||| ||||| |||||| | ||||| |||||||||| ||| ||| |||||| |
|
|
| T |
4490381 |
tgcctcatcttctttcctttctctcccaccatcaattcattgatcagtttctctacctcttctctctttacattggtatcaattttcatcccaatctccc |
4490282 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 40 - 242
Target Start/End: Original strand, 4601792 - 4601994
Alignment:
| Q |
40 |
ttgtttaagcatgacctccttaatcactttgtccaagttcatgtatgaacagccacgaggactggtgttctcctctgccttcttcttcaactccatggcc |
139 |
Q |
| |
|
||||||||||| ||||||||||| |||||||||| |||| |||||||||| |||| | || ||| |||||| |||| |||||||||||||||||||| |
|
|
| T |
4601792 |
ttgtttaagcaacacctccttaataactttgtccaggttcttgtatgaacaaccacctagtctagtgctctcctttgccatcttcttcaactccatggcc |
4601891 |
T |
|
| Q |
140 |
ttttgcctcatcttcattcctttatctcctgacatcaattcattgatcagattcgttaccttctctctcgtcacattagtatcaatttccataccagtct |
239 |
Q |
| |
|
||||||||||||||| | ||||||||||| | |||| |||||||||||| |||| | || ||||||| ||||||| ||||| |||||||||||| ||| |
|
|
| T |
4601892 |
ttttgcctcatcttcttgcctttatctccggctatcacttcattgatcagcttcgccaactcctctctcttcacatttgtatcgatttccataccaatct |
4601991 |
T |
|
| Q |
240 |
ccc |
242 |
Q |
| |
|
||| |
|
|
| T |
4601992 |
ccc |
4601994 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 43 - 242
Target Start/End: Original strand, 4592237 - 4592436
Alignment:
| Q |
43 |
tttaagcatgacctccttaatcactttgtccaagttcatgtatgaacagccacgaggactggtgttctcctctgccttcttcttcaactccatggccttt |
142 |
Q |
| |
|
|||||||| |||||||| |||| ||||||||||||||| |||||||| || | ||| || ||||||||||||||||||||||||||||| || |||||| |
|
|
| T |
4592237 |
tttaagcaacacctccttgatcaatttgtccaagttcatatatgaacaacctccaggtctcgtgttctcctctgccttcttcttcaactcgattgccttt |
4592336 |
T |
|
| Q |
143 |
tgcctcatcttcattcctttatctcctgacatcaattcattgatcagattcgttaccttctctctcgtcacattagtatcaatttccataccagtctccc |
242 |
Q |
| |
|
| |||||||||| ||||||| ||||| ||||||||||||||| || ||| |||| ||||||| | ||||| |||||||||||||| ||| |||||| |
|
|
| T |
4592337 |
ttcctcatcttctttcctttctctcccaccatcaattcattgataagtttctccacctcctctctctttacattcgtatcaatttccatcccaatctccc |
4592436 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 40 - 185
Target Start/End: Original strand, 4560509 - 4560654
Alignment:
| Q |
40 |
ttgtttaagcatgacctccttaatcactttgtccaagttcatgtatgaacagccacgaggactggtgttctcctctgccttcttcttcaactccatggcc |
139 |
Q |
| |
|
||||||||||| ||||||||||||||||| |||||||||||||||||||| || | ||| || |||| | |||| ||||| ||||||| |||||||||| |
|
|
| T |
4560509 |
ttgtttaagcaacacctccttaatcactttctccaagttcatgtatgaacaacctccaggtctcgtgtacacctccgcctttttcttcagctccatggcc |
4560608 |
T |
|
| Q |
140 |
ttttgcctcatcttcattcctttatctcctgacatcaattcattga |
185 |
Q |
| |
|
||||||||||||||| |||||||||||| |||||||||||||||| |
|
|
| T |
4560609 |
ttttgcctcatcttctttcctttatctcaggacatcaattcattga |
4560654 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 15 - 185
Target Start/End: Complemental strand, 4267320 - 4267150
Alignment:
| Q |
15 |
tagaataaatcactttagtctagcattgtttaagcatgacctccttaatcactttgtccaagttcatgtatgaacagccacgaggactggtgttctcctc |
114 |
Q |
| |
|
|||||||||| |||| | ||||| ||||||||||||||||||||||||| |||||||||||||||||||||||| | |||| ||| || |||||||| || |
|
|
| T |
4267320 |
tagaataaatgacttcaatctagtattgtttaagcatgacctccttaataactttgtccaagttcatgtatgaaaaaccaccaggtcttgtgttctcttc |
4267221 |
T |
|
| Q |
115 |
tgccttcttcttcaactccatggccttttgcctcatcttcattcctttatctcctgacatcaattcattga |
185 |
Q |
| |
|
||||||| |||||||||||| | | |||||| ||||| | ||||||| ||||| |||||||||||||| |
|
|
| T |
4267220 |
tgccttcctcttcaactccaagacattttgcttcatcatatttcctttctctcccaccatcaattcattga |
4267150 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 40 - 242
Target Start/End: Original strand, 4563714 - 4563916
Alignment:
| Q |
40 |
ttgtttaagcatgacctccttaatcactttgtccaagttcatgtatgaacagccacgaggactggtgttctcctctgccttcttcttcaactccatggcc |
139 |
Q |
| |
|
||||||||||| |||||||| ||||||||||||||||||||||||||||| || | || || ||||| ||||| | |||||||||||||| || ||| |
|
|
| T |
4563714 |
ttgtttaagcaaaacctccttgatcactttgtccaagttcatgtatgaacaacctccagctctcgtgttttcctccactttcttcttcaactcaattgcc |
4563813 |
T |
|
| Q |
140 |
ttttgcctcatcttcattcctttatctcctgacatcaattcattgatcagattcgttaccttctctctcgtcacattagtatcaatttccataccagtct |
239 |
Q |
| |
|
||||||| ||||||| ||||||| |||||||||||||||||||||| || ||| |||| |||||| | ||||| ||||| |||||||| ||| ||| |
|
|
| T |
4563814 |
ttttgccgcatcttctttcctttctctcctgacatcaattcattgacaagtttctccacctcttctctctttacattcgtatcgatttccatcccaatct |
4563913 |
T |
|
| Q |
240 |
ccc |
242 |
Q |
| |
|
||| |
|
|
| T |
4563914 |
ccc |
4563916 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 40 - 242
Target Start/End: Original strand, 4574311 - 4574513
Alignment:
| Q |
40 |
ttgtttaagcatgacctccttaatcactttgtccaagttcatgtatgaacagccacgaggactggtgttctcctctgccttcttcttcaactccatggcc |
139 |
Q |
| |
|
||||||||||| ||||||||||||||||| |||||||| |||||||||| || | ||| || |||| | |||| |||||||||||| ||| ||||| |
|
|
| T |
4574311 |
ttgtttaagcaacacctccttaatcactttctccaagtttgtgtatgaacaacctccaggtctcgtgtccacctccaccttcttcttcagctcaatggct |
4574410 |
T |
|
| Q |
140 |
ttttgcctcatcttcattcctttatctcctgacatcaattcattgatcagattcgttaccttctctctcgtcacattagtatcaatttccataccagtct |
239 |
Q |
| |
|
||||||||||||||| ||||||||||||| |||||||||||||||| ||| ||| |||| ||| ||| | ||||||||||| |||||| | ||| ||| |
|
|
| T |
4574411 |
ttttgcctcatcttctttcctttatctccggacatcaattcattgaccagtttctccacctcctccctctttacattagtatcgatttcctttccaatct |
4574510 |
T |
|
| Q |
240 |
ccc |
242 |
Q |
| |
|
||| |
|
|
| T |
4574511 |
ccc |
4574513 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 43 - 242
Target Start/End: Original strand, 4570978 - 4571177
Alignment:
| Q |
43 |
tttaagcatgacctccttaatcactttgtccaagttcatgtatgaacagccacgaggactggtgttctcctctgccttcttcttcaactccatggccttt |
142 |
Q |
| |
|
|||||||| ||||||||||||||||| |||||||||||||||||||| |||| ||| || |||| |||||| ||||||||||||| |||||| ||| |
|
|
| T |
4570978 |
tttaagcaaaacctccttaatcactttttccaagttcatgtatgaacaaccaccaggtctcgtgtcctcctccgccttcttcttcatctccattatattt |
4571077 |
T |
|
| Q |
143 |
tgcctcatcttcattcctttatctcctgacatcaattcattgatcagattcgttaccttctctctcgtcacattagtatcaatttccataccagtctccc |
242 |
Q |
| |
|
| |||||||||| ||||||||||||| |||||||||||||| || |||| |||| | |||| ||||||||||||| ||||| || ||| |||||| |
|
|
| T |
4571078 |
ttcctcatcttctttcctttatctcccaccatcaattcattgaccaaattctccacctcatttctcttcacattagtatcgatttcgattccaatctccc |
4571177 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 53 - 228
Target Start/End: Original strand, 4579448 - 4579623
Alignment:
| Q |
53 |
acctccttaatcactttgtccaagttcatgtatgaacagccacgaggactggtgttctcctctgccttcttcttcaactccatggccttttgcctcatct |
152 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||||||| | ||| || |||| |||||| |||||||||||||||| || |||||||||||||||| |
|
|
| T |
4579448 |
acctccttaatcactttctccaagttcatgtatgaacagcctccaggtctcgtgtcctcctccaccttcttcttcaactcaattgccttttgcctcatct |
4579547 |
T |
|
| Q |
153 |
tcattcctttatctcctgacatcaattcattgatcagattcgttaccttctctctcgtcacattagtatcaatttc |
228 |
Q |
| |
|
|| || |||| ||||| |||||||||||| | ||| ||| |||| ||||||| |||||||||| || ||||| |
|
|
| T |
4579548 |
tctttgctttctctcccaccatcaattcattaaccagcttctccacctcctctctcttcacattagtgtcgatttc |
4579623 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 43 - 242
Target Start/End: Original strand, 4585642 - 4585841
Alignment:
| Q |
43 |
tttaagcatgacctccttaatcactttgtccaagttcatgtatgaacagccacgaggactggtgttctcctctgccttcttcttcaactccatggccttt |
142 |
Q |
| |
|
|||||||| ||||||||||||||||| |||||||| ||||||||||| || | ||| || |||| |||||| ||||||||||||||||| || |||||| |
|
|
| T |
4585642 |
tttaagcaaaacctccttaatcactttttccaagtttatgtatgaacaacctccaggtctcgtgtcctcctccgccttcttcttcaactcgattgccttt |
4585741 |
T |
|
| Q |
143 |
tgcctcatcttcattcctttatctcctgacatcaattcattgatcagattcgttaccttctctctcgtcacattagtatcaatttccataccagtctccc |
242 |
Q |
| |
|
|||||||||||| |||| || ||||| |||||||||||||| || ||| |||| ||||||| ||||||| || |||| |||||| ||| |||||| |
|
|
| T |
4585742 |
tgcctcatcttctttccattctctcccaccatcaattcattgaccaacttctccacctcctctctcttcacattggtgtcaacttccatcccaatctccc |
4585841 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 40 - 231
Target Start/End: Complemental strand, 4613847 - 4613656
Alignment:
| Q |
40 |
ttgtttaagcatgacctccttaatcactttgtccaagttcatgtatgaacagccacgaggactggtgttctcctctgccttcttcttcaactccatggcc |
139 |
Q |
| |
|
|||||| |||| ||||| || |||||||||||||||||||| |||||||| || | || || |||| |||||||||||||||||||||||| || ||| |
|
|
| T |
4613847 |
ttgtttcagcagcacctcattgatcactttgtccaagttcatatatgaacaacctcctggtctcgtgtcctcctctgccttcttcttcaactcaattgcc |
4613748 |
T |
|
| Q |
140 |
ttttgcctcatcttcattcctttatctcctgacatcaattcattgatcagattcgttaccttctctctcgtcacattagtatcaatttccat |
231 |
Q |
| |
|
||||||||||| ||| ||||||| ||||| |||||||||||||| ||| ||| ||||| |||||| ||||||| || ||||||||||| |
|
|
| T |
4613747 |
ttttgcctcattttctttcctttctctcccaccatcaattcattgaccagcttctctacctcatctctcttcacattggtgtcaatttccat |
4613656 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #21
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 10 - 242
Target Start/End: Complemental strand, 4299899 - 4299673
Alignment:
| Q |
10 |
tttcatagaataaatcactttagtctagcattgtttaagcatgacctccttaatcactttgtccaagttcatgtatgaacagccacgaggactggtgttc |
109 |
Q |
| |
|
|||| ||||||||||||||||| |||| |||||||||||| ||||||||||| |||||||||||||||||||| ||||| |||| ||| | |||||| |
|
|
| T |
4299899 |
tttcctagaataaatcactttattctaatattgtttaagcagaacctccttaataactttgtccaagttcatgtacgaacaaccacctggattagtgttc |
4299800 |
T |
|
| Q |
110 |
tcctctgccttcttcttcaactccatggccttttgcctcatcttcattcctttatctcctgacatcaattcattgatcagattcgttaccttctctctcg |
209 |
Q |
| |
|
|||||||| |||||||||| | |||||||| |||||||| |||||| ||||| |||||||||||||||||| || |||| ||||||| |
|
|
| T |
4299799 |
tcctctgc------cttcaactcccttgccttttgtctcatcttatctcctttctctcccaccatcaattcattgatcagcttttccacctcctctctcc |
4299706 |
T |
|
| Q |
210 |
tcacattagtatcaatttccataccagtctccc |
242 |
Q |
| |
|
||||||| ||||| ||||| || ||| |||||| |
|
|
| T |
4299705 |
tcacatttgtatcgatttcgattccaatctccc |
4299673 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #22
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 40 - 242
Target Start/End: Original strand, 4557128 - 4557330
Alignment:
| Q |
40 |
ttgtttaagcatgacctccttaatcactttgtccaagttcatgtatgaacagccacgaggactggtgttctcctctgccttcttcttcaactccatggcc |
139 |
Q |
| |
|
||||||||||| ||||||||||||||||| ||||| |||||||||||||| |||| ||| || |||| |||||| |||||| |||||| ||| || | |
|
|
| T |
4557128 |
ttgtttaagcaaaacctccttaatcactttttccaaattcatgtatgaacaaccaccaggtctcgtgtcctcctccgccttcgtcttcatctcaattatc |
4557227 |
T |
|
| Q |
140 |
ttttgcctcatcttcattcctttatctcctgacatcaattcattgatcagattcgttaccttctctctcgtcacattagtatcaatttccataccagtct |
239 |
Q |
| |
|
|||| || ||||||| ||||||| || || |||||||||||||| || |||| ||||| |||||| ||||||| || ||||||||||| ||| ||| |
|
|
| T |
4557228 |
tttttccacatcttctttcctttctccccctccatcaattcattgaccaaattctctacctcatctctcttcacattggtgtcaatttccatgccaatct |
4557327 |
T |
|
| Q |
240 |
ccc |
242 |
Q |
| |
|
||| |
|
|
| T |
4557328 |
ccc |
4557330 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #23
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 53 - 227
Target Start/End: Original strand, 4598187 - 4598361
Alignment:
| Q |
53 |
acctccttaatcactttgtccaagttcatgtatgaacagccacgaggactggtgttctcctctgccttcttcttcaactccatggccttttgcctcatct |
152 |
Q |
| |
|
||||||||||||||||| || ||||||||||||||||| || | | | || || | |||||| |||||| ||||||| || || | |||||||||||| | |
|
|
| T |
4598187 |
acctccttaatcactttctctaagttcatgtatgaacaacctccaagtctcgtttcctcctccgccttcatcttcaaatcaattgtcttttgcctcattt |
4598286 |
T |
|
| Q |
153 |
tcattcctttatctcctgacatcaattcattgatcagattcgttaccttctctctcgtcacattagtatcaattt |
227 |
Q |
| |
|
|| ||||||||||||| ||||||||||| |||| ||| ||| |||| ||||||| |||||||||| ||||||| |
|
|
| T |
4598287 |
tctttcctttatctcccgacatcaattcgttgaccagcttctccacctcctctctcttcacattagtttcaattt |
4598361 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #24
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 40 - 241
Target Start/End: Original strand, 4505860 - 4506061
Alignment:
| Q |
40 |
ttgtttaagcatgacctccttaatcactttgtccaagttcatgtatgaacagccacgaggactggtgttctcctctgccttcttcttcaactccatggcc |
139 |
Q |
| |
|
||||||||||| ||||||||||| |||||||||||||||||| ||||||| |||| ||| || || | ||||| |||| |||| |||||||||||| || |
|
|
| T |
4505860 |
ttgtttaagcaacacctccttaataactttgtccaagttcatgaatgaacaaccaccaggtcttgtatcctcctttgccctctttttcaactccatgacc |
4505959 |
T |
|
| Q |
140 |
ttttgcctcatcttcattcctttatctcctgacatcaattcattgatcagattcgttaccttctctctcgtcacattagtatcaatttccataccagtct |
239 |
Q |
| |
|
|||| ||||||||| ||||||| ||||| ||| | ||||| || ||| ||| ||| || ||||| ||||||||||||||||||| || ||| ||| |
|
|
| T |
4505960 |
tttttcctcatcttgtttcctttctctccaaccataatttcatcgaccagcttctctacattttctctattcacattagtatcaatttcgattccaatct |
4506059 |
T |
|
| Q |
240 |
cc |
241 |
Q |
| |
|
|| |
|
|
| T |
4506060 |
cc |
4506061 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #25
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 56 - 228
Target Start/End: Original strand, 4568072 - 4568247
Alignment:
| Q |
56 |
tccttaatcactttgtccaagttcatgtatgaacagccacgaggactggtgttctcctctgccttc---ttcttcaactccatggccttttgcctcatct |
152 |
Q |
| |
|
||||||||||||||||||||||||||||||||| | ||| ||| || |||| || |||||||||| ||||||||||||| ||||||||||||||||| |
|
|
| T |
4568072 |
tccttaatcactttgtccaagttcatgtatgaagaatcaccaggtcttgtgtccttctctgccttcttcttcttcaactccacggccttttgcctcatct |
4568171 |
T |
|
| Q |
153 |
tcattcctttatctcctgacatcaattcattgatcagattcgttaccttctctctcgtcacattagtatcaatttc |
228 |
Q |
| |
|
| ||||||| | ||| ||| |||||||| ||||| ||| |||| ||||||| ||||||| ||||||||||| |
|
|
| T |
4568172 |
tttttcctttctgtcccaccattaattcattcatcagcttctccacctcctctctcttcacatttgtatcaatttc |
4568247 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #26
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 40 - 168
Target Start/End: Original strand, 4492958 - 4493086
Alignment:
| Q |
40 |
ttgtttaagcatgacctccttaatcactttgtccaagttcatgtatgaacagccacgagg-actggtgttctcctctgccttcttcttcaactccatggc |
138 |
Q |
| |
|
||||||||||| ||| ||||| ||||||||||||||||||||||||||||| |||| ||| ||| |||| ||||||||||||||| ||||||||| |||| |
|
|
| T |
4492958 |
ttgtttaagcaagacatccttgatcactttgtccaagttcatgtatgaacaaccaccaggtact-gtgtcctcctctgccttctttttcaactccgtggc |
4493056 |
T |
|
| Q |
139 |
cttttgcctcatcttcattcctttatctcc |
168 |
Q |
| |
|
||| ||||||||| ||||||| ||||| |
|
|
| T |
4493057 |
ttttctcctcatcttgtttcctttctctcc |
4493086 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #27
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 41 - 143
Target Start/End: Complemental strand, 4392154 - 4392052
Alignment:
| Q |
41 |
tgtttaagcatgacctccttaatcactttgtccaagttcatgtatgaacagccacgaggactggtgttctcctctgccttcttcttcaactccatggcct |
140 |
Q |
| |
|
|||||||||| |||||||||||||| |||||||||||||||| ||||| | |||| ||| | |||| ||||| |||||||||||||||||| || |||| |
|
|
| T |
4392154 |
tgtttaagcaagacctccttaatcagtttgtccaagttcatgaatgaagaaccaccaggtcatgtgtcctcctttgccttcttcttcaactcgatcgcct |
4392055 |
T |
|
| Q |
141 |
ttt |
143 |
Q |
| |
|
||| |
|
|
| T |
4392054 |
ttt |
4392052 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #28
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 40 - 185
Target Start/End: Complemental strand, 4515250 - 4515105
Alignment:
| Q |
40 |
ttgtttaagcatgacctccttaatcactttgtccaagttcatgtatgaacagccacgaggactggtgttctcctctgccttcttcttcaactccatggcc |
139 |
Q |
| |
|
||||||||||| |||||||| ||||||||||||||||||| ||||||| | || | | | || |||| ||| ||||||||||| ||||||||||| || |
|
|
| T |
4515250 |
ttgtttaagcaacacctccttgatcactttgtccaagttcaagtatgaagacccgccaagtctagtgtcctcgtctgccttctttttcaactccataacc |
4515151 |
T |
|
| Q |
140 |
ttttgcctcatcttcattcctttatctcctgacatcaattcattga |
185 |
Q |
| |
|
|||| |||||| || ||||||| ||||| |||||||||||||| |
|
|
| T |
4515150 |
tttttcctcattttatttcctttctctcccaccatcaattcattga |
4515105 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #29
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 40 - 159
Target Start/End: Original strand, 4461126 - 4461245
Alignment:
| Q |
40 |
ttgtttaagcatgacctccttaatcactttgtccaagttcatgtatgaacagccacgaggactggtgttctcctctgccttcttcttcaactccatggcc |
139 |
Q |
| |
|
||||||||||| ||| |||||||| ||||||||||||||| |||||||| || | ||| ||||| | |||||| |||||||||| || |||||| || |
|
|
| T |
4461126 |
ttgtttaagcaagacatccttaatgactttgtccaagttcttgtatgaaacacctccaggtctggtatcctcctccaccttcttcttgaattccatgacc |
4461225 |
T |
|
| Q |
140 |
ttttgcctcatcttcattcc |
159 |
Q |
| |
|
||||||||||||||| |||| |
|
|
| T |
4461226 |
ttttgcctcatcttctttcc |
4461245 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #30
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 43 - 185
Target Start/End: Original strand, 4469809 - 4469951
Alignment:
| Q |
43 |
tttaagcatgacctccttaatcactttgtccaagttcatgtatgaacagccacgaggactggtgttctcctctgccttcttcttcaactccatggccttt |
142 |
Q |
| |
|
|||||||| ||| |||||||| ||||||||||||||| |||||||| || | ||| ||||| | |||||| |||||||||| ||||||||| |||| |
|
|
| T |
4469809 |
tttaagcaagacatccttaatgactttgtccaagttcttgtatgaaacacctccaggtctggtatcctcctccaccttcttcttgaactccatgatcttt |
4469908 |
T |
|
| Q |
143 |
tgcctcatcttcattcctttatctcctgacatcaattcattga |
185 |
Q |
| |
|
| |||||||||| |||| || ||||| |||||||||||||| |
|
|
| T |
4469909 |
tccctcatcttctttccattctctccaaccatcaattcattga |
4469951 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 46 - 90
Target Start/End: Original strand, 4457644 - 4457688
Alignment:
| Q |
46 |
aagcatgacctccttaatcactttgtccaagttcatgtatgaaca |
90 |
Q |
| |
|
||||||||| |||||| |||||||||||||||||| ||||||||| |
|
|
| T |
4457644 |
aagcatgacttccttagtcactttgtccaagttcaagtatgaaca |
4457688 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 88
Target Start/End: Complemental strand, 4607020 - 4606972
Alignment:
| Q |
40 |
ttgtttaagcatgacctccttaatcactttgtccaagttcatgtatgaa |
88 |
Q |
| |
|
||||||||||| |||| |||||||||||| |||||||||||||||||| |
|
|
| T |
4607020 |
ttgtttaagcaaaaccttcttaatcactttttccaagttcatgtatgaa |
4606972 |
T |
|
Back To:
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Target: chr8 (Bit Score: 88; Significance: 2e-42; HSPs: 3)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 40 - 235
Target Start/End: Original strand, 1674229 - 1674424
Alignment:
| Q |
40 |
ttgtttaagcatgacctccttaatcactttgtccaagttcatgtatgaacagccacgaggactggtgttctcctctgccttcttcttcaactccatggcc |
139 |
Q |
| |
|
||||||||||| || ||||||||||||||||||||||||||||||||||| |||| || || |||||||||||||||||||||||||| ||||||||| |
|
|
| T |
1674229 |
ttgtttaagcaacacttccttaatcactttgtccaagttcatgtatgaacaaccacctggtctagtgttctcctctgccttcttcttcaattccatggcc |
1674328 |
T |
|
| Q |
140 |
ttttgcctcatcttcattcctttatctcctgacatcaattcattgatcagattcgttaccttctctctcgtcacattagtatcaatttccatacca |
235 |
Q |
| |
|
|||||||||||||| |||| || ||||| ||||||||||||||| || ||| | ||||||| ||||||| |||||||||||||||||| |
|
|
| T |
1674329 |
ttttgcctcatcttttttccattctctcccaccatcaattcattgataagcttctccaaaccctctctcttcacattcgtatcaatttccatacca |
1674424 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 40 - 183
Target Start/End: Complemental strand, 20863972 - 20863829
Alignment:
| Q |
40 |
ttgtttaagcatgacctccttaatcactttgtccaagttcatgtatgaacagccacgaggactggtgttctcctctgccttcttcttcaactccatggcc |
139 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||||||| ||||||| || || || |||| |||||||||||||||||||||||| | | | |
|
|
| T |
20863972 |
ttgtttaagcaacacctccttaatcactttgtccaagttcatatatgaaccaccttccggtcttgtgtcctcctctgccttcttcttcaactcatttgtc |
20863873 |
T |
|
| Q |
140 |
ttttgcctcatcttcattcctttatctcctgacatcaattcatt |
183 |
Q |
| |
|
|||||||||||| || ||||||| ||||| |||||||||||| |
|
|
| T |
20863872 |
ttttgcctcatcctccttcctttctctcccaccatcaattcatt |
20863829 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 40 - 95
Target Start/End: Complemental strand, 16686396 - 16686341
Alignment:
| Q |
40 |
ttgtttaagcatgacctccttaatcactttgtccaagttcatgtatgaacagccac |
95 |
Q |
| |
|
||||||||||| |||||| |||||||||| |||||||||||||||||||| |||| |
|
|
| T |
16686396 |
ttgtttaagcaaaacctccataatcactttttccaagttcatgtatgaacaaccac |
16686341 |
T |
|
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Target: chr7 (Bit Score: 84; Significance: 5e-40; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 43 - 242
Target Start/End: Original strand, 3086426 - 3086625
Alignment:
| Q |
43 |
tttaagcatgacctccttaatcactttgtccaagttcatgtatgaacagccacgaggactggtgttctcctctgccttcttcttcaactccatggccttt |
142 |
Q |
| |
|
|||||||| |||||||||||| |||||||||||||||||||||||||| |||| |||||||||||| ||||| |||||||| ||||| | | ||| |
|
|
| T |
3086426 |
tttaagcaagacctccttaataactttgtccaagttcatgtatgaacaaccaccgatactggtgttctcttctgctttcttctttaactctgcgacattt |
3086525 |
T |
|
| Q |
143 |
tgcctcatcttcattcctttatctcctgacatcaattcattgatcagattcgttaccttctctctcgtcacattagtatcaatttccataccagtctccc |
242 |
Q |
| |
|
|||||||||||| ||||||||||||| |||||||||||||||||| ||| |||| ||||||| ||||||||||||| ||||| || ||| |||||| |
|
|
| T |
3086526 |
tgcctcatcttctttcctttatctcccaccatcaattcattgatcagcttctcgacctcctctctcttcacattagtatcgatttcaattccaatctccc |
3086625 |
T |
|
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Target: chr5 (Bit Score: 83; Significance: 2e-39; HSPs: 2)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 15 - 185
Target Start/End: Original strand, 24102977 - 24103147
Alignment:
| Q |
15 |
tagaataaatcactttagtctagcattgtttaagcatgacctccttaatcactttgtccaagttcatgtatgaacagccacgaggactggtgttctcctc |
114 |
Q |
| |
|
|||||||||| |||||| ||||| ||||||||||||||||||||||||| |||||||||||||||||||||||| | |||| || || |||||||| || |
|
|
| T |
24102977 |
tagaataaatgactttaatctagaattgtttaagcatgacctccttaataactttgtccaagttcatgtatgaaaaaccaccagatcttgtgttctcttc |
24103076 |
T |
|
| Q |
115 |
tgccttcttcttcaactccatggccttttgcctcatcttcattcctttatctcctgacatcaattcattga |
185 |
Q |
| |
|
|||||||||||| ||||||| | |||||||| ||||| || |||| || ||||| |||||||||||||| |
|
|
| T |
24103077 |
tgccttcttcttgaactccaagaccttttgcttcatcgtctttccgttctctcccaccatcaattcattga |
24103147 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 56 - 235
Target Start/End: Complemental strand, 28000212 - 28000033
Alignment:
| Q |
56 |
tccttaatcactttgtccaagttcatgtatgaacagccacgaggactggtgttctcctctgccttcttcttcaactccatggccttttgcctcatcttca |
155 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||| || || ||||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
28000212 |
tccttaatcactttgtccaagttcatgtatgaacaaccacctggtctagtgttctcctctgcctttttcttcaactccatggccttttgcctcatctttt |
28000113 |
T |
|
| Q |
156 |
ttcctttatctcctgacatcaattcattgatcagattcgttaccttctctctcgtcacattagtatcaatttccatacca |
235 |
Q |
| |
|
|||| || ||||| ||||||||||||||| || ||| | | |||| || ||||||| ||||||||||||||||| |
|
|
| T |
28000112 |
ttccattctctcccaccatcaattcattgataagcttctccaaatcctctatcttcacattcatatcaatttccatacca |
28000033 |
T |
|
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Target: scaffold0288 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0288
Description:
Target: scaffold0288; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 38 - 185
Target Start/End: Complemental strand, 3850 - 3703
Alignment:
| Q |
38 |
cattgtttaagcatgacctccttaatcactttgtccaagttcatgtatgaacagccacgaggactggtgttctcctctgccttcttcttcaactccatgg |
137 |
Q |
| |
|
||||||||||||| ||||||||||| |||||||||| |||||||||||||| |||| || || ||||||||||||||||||||||| ||||||| || |
|
|
| T |
3850 |
cattgtttaagcaaaacctccttaataactttgtccaggttcatgtatgaacgaccacctggtctagtgttctcctctgccttcttctttaactccacgg |
3751 |
T |
|
| Q |
138 |
ccttttgcctcatcttcattcctttatctcctgacatcaattcattga |
185 |
Q |
| |
|
||||||||||||||||| ||||||| ||||| | |||||||||||| |
|
|
| T |
3750 |
ccttttgcctcatcttctttcctttctctcccaccgtcaattcattga |
3703 |
T |
|
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Target: chr3 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 40 - 235
Target Start/End: Original strand, 1281117 - 1281312
Alignment:
| Q |
40 |
ttgtttaagcatgacctccttaatcactttgtccaagttcatgtatgaacagccacgaggactggtgttctcctctgccttcttcttcaactccatggcc |
139 |
Q |
| |
|
||||||||||| | ||||||||||||||||| ||||||||||||||||| |||| || || ||||||||||| ||| ||||||||| ||||||||| |
|
|
| T |
1281117 |
ttgtttaagcaacatttccttaatcactttgtcgaagttcatgtatgaacaaccacccggtctagtgttctcctccgccgccttcttcaattccatggcc |
1281216 |
T |
|
| Q |
140 |
ttttgcctcatcttcattcctttatctcctgacatcaattcattgatcagattcgttaccttctctctcgtcacattagtatcaatttccatacca |
235 |
Q |
| |
|
|||| ||||| ||| |||||| ||| || | |||||||||||||||| || | |||| ||||||| ||||||| ||||| |||||||||||| |
|
|
| T |
1281217 |
ttttctctcatattctttccttcatccccggctatcaattcattgatcaacttagccacctcctctctcttcacatttgtatcgatttccatacca |
1281312 |
T |
|
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