View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12660_low_55 (Length: 239)

Name: NF12660_low_55
Description: NF12660
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12660_low_55
NF12660_low_55
[»] chr5 (35 HSPs)
chr5 (16-168)||(20683581-20683733)
chr5 (180-239)||(6817121-6817180)
chr5 (180-239)||(14143900-14143959)
chr5 (181-239)||(14411696-14411754)
chr5 (182-239)||(23979222-23979279)
chr5 (180-239)||(17762281-17762340)
chr5 (181-239)||(24074302-24074360)
chr5 (181-239)||(24837168-24837226)
chr5 (182-239)||(24837490-24837547)
chr5 (180-239)||(30512286-30512345)
chr5 (180-239)||(30552626-30552685)
chr5 (181-239)||(17762603-17762661)
chr5 (181-239)||(24651020-24651078)
chr5 (182-239)||(18336777-18336833)
chr5 (182-239)||(31799640-31799697)
chr5 (183-239)||(993751-993807)
chr5 (181-233)||(7126244-7126296)
chr5 (187-239)||(27159275-27159327)
chr5 (183-239)||(41001673-41001729)
chr5 (182-239)||(18336467-18336524)
chr5 (181-234)||(31799965-31800018)
chr5 (183-239)||(4919310-4919366)
chr5 (187-239)||(7125923-7125975)
chr5 (181-234)||(20709205-20709262)
chr5 (180-239)||(20709532-20709591)
chr5 (181-239)||(4918988-4919046)
chr5 (181-239)||(14144222-14144280)
chr5 (180-234)||(29445131-29445185)
chr5 (180-233)||(27158989-27159042)
chr5 (195-239)||(22571090-22571134)
chr5 (196-239)||(41001370-41001413)
chr5 (181-228)||(41424515-41424562)
chr5 (181-239)||(14411986-14412044)
chr5 (184-230)||(24650704-24650750)
chr5 (186-239)||(29444810-29444863)
[»] chr2 (37 HSPs)
chr2 (181-239)||(19251790-19251848)
chr2 (180-239)||(17463412-17463471)
chr2 (181-239)||(26236126-26236184)
chr2 (183-235)||(26560880-26560932)
chr2 (180-239)||(17850907-17850966)
chr2 (180-239)||(19251469-19251528)
chr2 (180-239)||(22263514-22263573)
chr2 (182-236)||(17850587-17850641)
chr2 (181-239)||(20498746-20498804)
chr2 (181-239)||(39878102-39878159)
chr2 (182-239)||(23806273-23806330)
chr2 (182-239)||(23854688-23854745)
chr2 (181-234)||(26236420-26236473)
chr2 (182-239)||(34548574-34548631)
chr2 (182-239)||(42670717-42670774)
chr2 (181-229)||(23046706-23046754)
chr2 (182-234)||(26136143-26136195)
chr2 (182-229)||(23855025-23855072)
chr2 (185-239)||(13254757-13254811)
chr2 (182-239)||(15106386-15106443)
chr2 (180-236)||(12419046-12419102)
chr2 (180-236)||(12431106-12431162)
chr2 (180-239)||(30959992-30960051)
chr2 (181-239)||(23047903-23047961)
chr2 (193-239)||(26135828-26135874)
chr2 (182-239)||(15106067-15106124)
chr2 (182-239)||(17463092-17463149)
chr2 (186-239)||(30390463-30390516)
chr2 (182-239)||(30958684-30958741)
chr2 (182-239)||(39878394-39878450)
chr2 (182-239)||(42671040-42671097)
chr2 (180-239)||(33290368-33290427)
chr2 (181-239)||(13254496-13254554)
chr2 (181-239)||(26560555-26560613)
chr2 (194-239)||(13284734-13284779)
chr2 (182-239)||(44098943-44099000)
chr2 (195-239)||(33290062-33290106)
[»] chr3 (51 HSPs)
chr3 (180-239)||(45969913-45969972)
chr3 (180-239)||(9266973-9267032)
chr3 (180-239)||(14262357-14262416)
chr3 (180-239)||(45970237-45970296)
chr3 (181-239)||(9267295-9267353)
chr3 (181-239)||(14171907-14171965)
chr3 (181-239)||(19112763-19112821)
chr3 (180-239)||(11003730-11003789)
chr3 (180-239)||(16721989-16722048)
chr3 (180-239)||(30500361-30500420)
chr3 (181-239)||(27946186-27946244)
chr3 (181-239)||(35995677-35995735)
chr3 (181-239)||(49986526-49986584)
chr3 (182-239)||(19720333-19720390)
chr3 (180-239)||(35995996-35996055)
chr3 (181-239)||(16722312-16722370)
chr3 (182-239)||(5800605-5800662)
chr3 (182-239)||(14162191-14162248)
chr3 (182-239)||(19113086-19113143)
chr3 (180-237)||(24490242-24490299)
chr3 (187-239)||(27946114-27946166)
chr3 (183-239)||(52553009-52553065)
chr3 (180-239)||(14262034-14262093)
chr3 (180-239)||(17465688-17465747)
chr3 (180-239)||(20853693-20853752)
chr3 (180-239)||(30500041-30500100)
chr3 (181-239)||(33372405-33372463)
chr3 (181-239)||(43572388-43572446)
chr3 (181-239)||(49986849-49986907)
chr3 (182-239)||(5800926-5800982)
chr3 (182-239)||(15328463-15328520)
chr3 (181-234)||(20854021-20854074)
chr3 (180-239)||(3424772-3424831)
chr3 (180-239)||(35741905-35741964)
chr3 (180-239)||(47575592-47575651)
chr3 (181-235)||(3425973-3426027)
chr3 (182-232)||(14161871-14161921)
chr3 (180-230)||(14171585-14171635)
chr3 (181-239)||(17465366-17465424)
chr3 (182-239)||(4204709-4204766)
chr3 (180-221)||(21632899-21632940)
chr3 (181-238)||(33372726-33372783)
chr3 (185-237)||(17649332-17649384)
chr3 (181-236)||(21633220-21633275)
chr3 (181-239)||(36990980-36991038)
chr3 (181-239)||(37016420-37016478)
chr3 (185-239)||(38283553-38283607)
chr3 (181-239)||(43572711-43572769)
chr3 (182-236)||(45003496-45003550)
chr3 (181-239)||(45003816-45003874)
chr3 (194-235)||(35740829-35740870)
[»] chr4 (42 HSPs)
chr4 (180-237)||(41946963-41947020)
chr4 (181-239)||(31218302-31218360)
chr4 (183-239)||(15641037-15641093)
chr4 (181-239)||(38573968-38574026)
chr4 (184-239)||(9618982-9619037)
chr4 (180-239)||(9619300-9619359)
chr4 (180-239)||(31944271-31944330)
chr4 (180-239)||(37013027-37013086)
chr4 (180-239)||(46046745-46046803)
chr4 (180-239)||(48259821-48259880)
chr4 (185-235)||(3018014-3018064)
chr4 (181-239)||(9397019-9397077)
chr4 (181-239)||(46046429-46046487)
chr4 (183-239)||(9516611-9516667)
chr4 (183-239)||(35376164-35376220)
chr4 (180-239)||(31090382-31090441)
chr4 (181-235)||(3273620-3273674)
chr4 (185-239)||(13131943-13131997)
chr4 (181-239)||(31943949-31944006)
chr4 (185-239)||(38574289-38574343)
chr4 (182-239)||(9516931-9516988)
chr4 (190-239)||(15640724-15640773)
chr4 (182-239)||(26252558-26252615)
chr4 (182-239)||(31090060-31090117)
chr4 (183-239)||(34063983-34064039)
chr4 (182-234)||(41947180-41947232)
chr4 (180-239)||(12904745-12904804)
chr4 (180-239)||(18667611-18667670)
chr4 (180-239)||(35376448-35376507)
chr4 (180-239)||(36887678-36887737)
chr4 (187-230)||(48580196-48580239)
chr4 (181-239)||(3018331-3018389)
chr4 (182-236)||(3273943-3273996)
chr4 (185-238)||(9396702-9396755)
chr4 (181-234)||(13132265-13132318)
chr4 (185-233)||(7819018-7819066)
chr4 (187-222)||(37012712-37012747)
chr4 (180-239)||(53896444-53896503)
chr4 (182-239)||(43313532-43313589)
chr4 (187-239)||(4355887-4355939)
chr4 (187-239)||(4356201-4356253)
chr4 (181-233)||(7819347-7819399)
[»] scaffold0361 (2 HSPs)
scaffold0361 (180-239)||(4560-4619)
scaffold0361 (181-239)||(4883-4941)
[»] chr8 (31 HSPs)
chr8 (180-239)||(10108368-10108427)
chr8 (180-239)||(21148257-21148316)
chr8 (180-239)||(30789828-30789887)
chr8 (181-239)||(5554868-5554926)
chr8 (182-239)||(43851665-43851722)
chr8 (181-239)||(10171464-10171522)
chr8 (181-239)||(17622889-17622947)
chr8 (182-239)||(14820295-14820352)
chr8 (182-239)||(18044148-18044205)
chr8 (180-239)||(7689844-7689903)
chr8 (180-239)||(10108691-10108750)
chr8 (180-239)||(14820615-14820674)
chr8 (180-239)||(21147934-21147993)
chr8 (180-236)||(26137008-26137064)
chr8 (180-239)||(26136683-26136742)
chr8 (180-239)||(43481636-43481695)
chr8 (181-239)||(7689523-7689581)
chr8 (181-239)||(35367409-35367467)
chr8 (181-239)||(40487735-40487793)
chr8 (182-239)||(14767825-14767882)
chr8 (190-239)||(42112993-42113042)
chr8 (180-236)||(20877069-20877125)
chr8 (180-239)||(5555190-5555249)
chr8 (180-239)||(42113302-42113361)
chr8 (181-239)||(2583642-2583700)
chr8 (193-239)||(30789519-30789565)
chr8 (181-233)||(42606080-42606132)
chr8 (180-239)||(17623207-17623266)
chr8 (181-239)||(1949651-1949709)
chr8 (206-239)||(21144598-21144631)
chr8 (180-236)||(8106076-8106132)
[»] chr7 (37 HSPs)
chr7 (180-239)||(28218176-28218235)
chr7 (181-239)||(28218484-28218542)
chr7 (180-239)||(41600279-41600338)
chr7 (181-239)||(12006540-12006598)
chr7 (181-239)||(20963814-20963872)
chr7 (181-239)||(23704981-23705039)
chr7 (181-239)||(48672276-48672334)
chr7 (182-239)||(20419536-20419593)
chr7 (181-237)||(23383823-23383879)
chr7 (180-239)||(10409694-10409753)
chr7 (181-239)||(12006861-12006919)
chr7 (182-236)||(23383499-23383553)
chr7 (181-239)||(25772652-25772710)
chr7 (181-239)||(48672600-48672658)
chr7 (182-239)||(6465855-6465912)
chr7 (182-239)||(20419858-20419915)
chr7 (182-239)||(23704662-23704719)
chr7 (183-239)||(31851242-31851298)
chr7 (180-239)||(7657967-7658026)
chr7 (181-228)||(20459022-20459069)
chr7 (182-233)||(38880048-38880099)
chr7 (181-239)||(20458691-20458749)
chr7 (186-239)||(1250527-1250580)
chr7 (182-239)||(16995200-16995257)
chr7 (182-239)||(20963494-20963551)
chr7 (182-239)||(38879723-38879780)
chr7 (183-239)||(7658286-7658342)
chr7 (182-234)||(24195198-24195250)
chr7 (180-232)||(25772362-25772414)
chr7 (182-234)||(41599958-41600010)
chr7 (180-234)||(33162862-33162916)
chr7 (180-233)||(31852157-31852210)
chr7 (183-239)||(44816832-44816890)
chr7 (181-239)||(14630335-14630393)
chr7 (181-239)||(14646971-14647029)
chr7 (187-239)||(23258245-23258297)
chr7 (183-239)||(48648263-48648319)
[»] chr1 (39 HSPs)
chr1 (180-239)||(18462284-18462343)
chr1 (181-239)||(48072282-48072340)
chr1 (180-239)||(4906960-4907019)
chr1 (180-239)||(17606627-17606686)
chr1 (180-239)||(39711393-39711452)
chr1 (182-239)||(39711074-39711130)
chr1 (182-239)||(39826367-39826424)
chr1 (180-239)||(33629011-33629070)
chr1 (185-239)||(17606307-17606361)
chr1 (181-239)||(20995697-20995755)
chr1 (181-239)||(29696564-29696622)
chr1 (181-235)||(33628689-33628743)
chr1 (182-232)||(52058011-52058061)
chr1 (182-239)||(18342338-18342395)
chr1 (182-239)||(39970967-39971024)
chr1 (180-239)||(24467627-24467686)
chr1 (182-239)||(24467948-24468002)
chr1 (180-239)||(29696878-29696937)
chr1 (180-239)||(39826048-39826107)
chr1 (180-239)||(52058329-52058388)
chr1 (182-239)||(8292804-8292861)
chr1 (180-239)||(8293129-8293188)
chr1 (180-239)||(43539668-43539727)
chr1 (194-236)||(17502053-17502095)
chr1 (181-239)||(27039637-27039695)
chr1 (180-234)||(30299230-30299284)
chr1 (182-239)||(4907283-4907340)
chr1 (180-232)||(18462612-18462664)
chr1 (180-236)||(34749136-34749192)
chr1 (187-239)||(42510336-42510388)
chr1 (182-233)||(13230059-13230110)
chr1 (181-239)||(17500768-17500826)
chr1 (181-239)||(43400752-43400810)
chr1 (181-239)||(30252219-30252279)
chr1 (182-239)||(30299552-30299609)
chr1 (182-239)||(34749426-34749483)
chr1 (187-236)||(37236723-37236772)
chr1 (182-239)||(48071961-48072018)
chr1 (182-214)||(39970645-39970677)
[»] chr6 (19 HSPs)
chr6 (181-239)||(24731934-24731992)
chr6 (182-239)||(9481182-9481239)
chr6 (180-239)||(32017824-32017883)
chr6 (183-239)||(34884558-34884614)
chr6 (180-239)||(18500313-18500372)
chr6 (185-239)||(26385595-26385649)
chr6 (180-234)||(30617965-30618019)
chr6 (181-234)||(18500655-18500708)
chr6 (186-237)||(10321737-10321788)
chr6 (181-238)||(2299635-2299692)
chr6 (182-239)||(26385278-26385335)
chr6 (180-232)||(30458898-30458950)
chr6 (180-239)||(2299338-2299397)
chr6 (183-234)||(19284130-19284181)
chr6 (180-223)||(24732274-24732317)
chr6 (181-233)||(33637844-33637896)
chr6 (187-239)||(9154884-9154937)
chr6 (182-239)||(21069514-21069571)
chr6 (193-230)||(33714494-33714531)
[»] scaffold0449 (2 HSPs)
scaffold0449 (180-239)||(7521-7580)
scaffold0449 (183-239)||(7227-7283)
[»] scaffold0185 (1 HSPs)
scaffold0185 (181-239)||(3868-3926)
[»] scaffold0176 (1 HSPs)
scaffold0176 (181-239)||(15949-16007)
[»] scaffold0141 (1 HSPs)
scaffold0141 (181-235)||(8324-8378)
[»] scaffold0117 (1 HSPs)
scaffold0117 (187-236)||(12306-12355)
[»] scaffold0809 (2 HSPs)
scaffold0809 (181-236)||(1730-1785)
scaffold0809 (180-239)||(1409-1468)
[»] scaffold0352 (2 HSPs)
scaffold0352 (181-239)||(6000-6058)
scaffold0352 (181-236)||(4666-4721)
[»] scaffold0477 (2 HSPs)
scaffold0477 (181-239)||(4879-4937)
scaffold0477 (180-234)||(5073-5126)


Alignment Details
Target: chr5 (Bit Score: 133; Significance: 3e-69; HSPs: 35)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 16 - 168
Target Start/End: Original strand, 20683581 - 20683733
Alignment:
Q  16 acaacacttaaaggatgaatcggaaaaaatcttggaggaactaagagtgcatattagtggaaatggattattccttttagttttgaatgtttccaattac 115  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||    
T  20683581 acaacacttaaaggatgaatcggaaaaaatcttggtggaactaagagtgcatattagtggaaatggattattcattttagttttgaatgttgccaattac 20683680  T
Q  116 atgtatttgtgggttctgttgtagatgcagaattcttagttttatttcatgtt 168  Q
    ||||||||||||||||||||||| ||||||||| |||||||||||||||||||    
T  20683681 atgtatttgtgggttctgttgtatatgcagaatccttagttttatttcatgtt 20683733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 180 - 239
Target Start/End: Original strand, 6817121 - 6817180
Alignment:
Q  180 aagggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6817121 aagggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 6817180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 180 - 239
Target Start/End: Original strand, 14143900 - 14143959
Alignment:
Q  180 aagggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  14143900 aagggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgta 14143959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 181 - 239
Target Start/End: Original strand, 14411696 - 14411754
Alignment:
Q  181 agggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  14411696 agggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgta 14411754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 182 - 239
Target Start/End: Complemental strand, 23979279 - 23979222
Alignment:
Q  182 gggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    |||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  23979279 gggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgta 23979222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 180 - 239
Target Start/End: Original strand, 17762281 - 17762340
Alignment:
Q  180 aagggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    ||||||||||||||||||| |||| ||||||||||| |||||||||||||||||||||||    
T  17762281 aagggtaaatacctctttttgtccctgtaatattagcgaattccggttttagtccctgta 17762340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 181 - 239
Target Start/End: Original strand, 24074302 - 24074360
Alignment:
Q  181 agggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    ||||||||||||||||||||||| ||||||||||| ||||| |||||||||||||||||    
T  24074302 agggtaaatacctcttttcgtccatgtaatattagcgaatttcggttttagtccctgta 24074360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 181 - 239
Target Start/End: Original strand, 24837168 - 24837226
Alignment:
Q  181 agggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    ||||||||||||||||||||||| ||||||| ||| |||||||||||||||||||||||    
T  24837168 agggtaaatacctcttttcgtccctgtaataatagcgaattccggttttagtccctgta 24837226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 182 - 239
Target Start/End: Complemental strand, 24837547 - 24837490
Alignment:
Q  182 gggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    |||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||    
T  24837547 gggtaaatacctcttttcgtccctgtaatattagcgaattccagttttagtccctgta 24837490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 180 - 239
Target Start/End: Original strand, 30512286 - 30512345
Alignment:
Q  180 aagggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    ||||||||||| |||||||||||| |||||||||||||||||  ||||||||||||||||    
T  30512286 aagggtaaatatctcttttcgtccctgtaatattagtgaattttggttttagtccctgta 30512345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 180 - 239
Target Start/End: Original strand, 30552626 - 30552685
Alignment:
Q  180 aagggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    ||||||||||| |||||||||||| |||||||||||||||||  ||||||||||||||||    
T  30552626 aagggtaaatatctcttttcgtccctgtaatattagtgaattttggttttagtccctgta 30552685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 181 - 239
Target Start/End: Complemental strand, 17762661 - 17762603
Alignment:
Q  181 agggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    ||||||||||||||||||||||| |||| |||||| |||||| ||||||||||||||||    
T  17762661 agggtaaatacctcttttcgtccctgtagtattagcgaattctggttttagtccctgta 17762603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 181 - 239
Target Start/End: Complemental strand, 24651078 - 24651020
Alignment:
Q  181 agggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    ||||||||||||||||||||||  ||||||||||| |||||||||||||||||| ||||    
T  24651078 agggtaaatacctcttttcgtctctgtaatattagcgaattccggttttagtccatgta 24651020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 182 - 239
Target Start/End: Complemental strand, 18336833 - 18336777
Alignment:
Q  182 gggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    |||||||||||||||||||||| ||||| ||||| |||||||||||||||||||||||    
T  18336833 gggtaaatacctcttttcgtccctgtaa-attagcgaattccggttttagtccctgta 18336777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 182 - 239
Target Start/End: Original strand, 31799640 - 31799697
Alignment:
Q  182 gggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    |||||||||||||||||||||| | ||||||||| |||||||||||| ||||||||||    
T  31799640 gggtaaatacctcttttcgtccctataatattagcgaattccggtttcagtccctgta 31799697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 183 - 239
Target Start/End: Original strand, 993751 - 993807
Alignment:
Q  183 ggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    ||||||||| ||||||||||  ||||||||||| |||||||||||||||||||||||    
T  993751 ggtaaatacttcttttcgtctctgtaatattagcgaattccggttttagtccctgta 993807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 181 - 233
Target Start/End: Complemental strand, 7126296 - 7126244
Alignment:
Q  181 agggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtc 233  Q
    ||||||||||||||||||| ||| ||||||||||| |||||||||||||||||    
T  7126296 agggtaaatacctcttttcatccctgtaatattagcgaattccggttttagtc 7126244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 187 - 239
Target Start/End: Complemental strand, 27159327 - 27159275
Alignment:
Q  187 aatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    ||||||||||||||||||||||||||||| ||||| |||||||||||| ||||    
T  27159327 aatacctcttttcgtccttgtaatattagcgaatttcggttttagtccttgta 27159275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 183 - 239
Target Start/End: Complemental strand, 41001729 - 41001673
Alignment:
Q  183 ggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    ||||||||||| ||||||||| ||||||||||| |||||||||||||||||| ||||    
T  41001729 ggtaaataccttttttcgtccctgtaatattagcgaattccggttttagtccttgta 41001673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 182 - 239
Target Start/End: Original strand, 18336467 - 18336524
Alignment:
Q  182 gggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    ||||||||| |||||||||||| | ||||||||| |||||||| ||||||||||||||    
T  18336467 gggtaaatatctcttttcgtccctataatattagcgaattccgattttagtccctgta 18336524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 181 - 234
Target Start/End: Complemental strand, 31800018 - 31799965
Alignment:
Q  181 agggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtcc 234  Q
    |||| |||||||||||||||||| | ||||||||| ||||||||||||||||||    
T  31800018 agggaaaatacctcttttcgtccctataatattagcgaattccggttttagtcc 31799965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 183 - 239
Target Start/End: Complemental strand, 4919366 - 4919310
Alignment:
Q  183 ggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    ||||||||||||||||||||  || |||||||| |||||||||||||||| ||||||    
T  4919366 ggtaaatacctcttttcgtctctggaatattagcgaattccggttttagttcctgta 4919310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 187 - 239
Target Start/End: Original strand, 7125923 - 7125975
Alignment:
Q  187 aatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    ||||||||||||||| | ||||||||||| |||||||| ||||||||||||||    
T  7125923 aatacctcttttcgttcctgtaatattagcgaattccgattttagtccctgta 7125975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 181 - 234
Target Start/End: Original strand, 20709205 - 20709262
Alignment:
Q  181 agggtaaatacctcttttcgtcc----ttgtaatattagtgaattccggttttagtcc 234  Q
    |||||||||||||||||||||||    || ||||||||||||||||||||||||||||    
T  20709205 agggtaaatacctcttttcgtccgtccttataatattagtgaattccggttttagtcc 20709262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 180 - 239
Target Start/End: Complemental strand, 20709591 - 20709532
Alignment:
Q  180 aagggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    |||||| ||||||||||||||||| ||||||||||  |||||  ||||||||||||||||    
T  20709591 aagggttaatacctcttttcgtccatgtaatattaacgaattttggttttagtccctgta 20709532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 181 - 239
Target Start/End: Original strand, 4918988 - 4919046
Alignment:
Q  181 agggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    ||||||||||||||||||| ||  ||||||||||| ||||| |||||||||| ||||||    
T  4918988 agggtaaatacctcttttcatctctgtaatattagcgaatttcggttttagttcctgta 4919046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 181 - 239
Target Start/End: Complemental strand, 14144280 - 14144222
Alignment:
Q  181 agggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    ||||| ||||||||||||||||  ||||||||||  |||||||| ||||||||||||||    
T  14144280 agggttaatacctcttttcgtcactgtaatattaacgaattccgattttagtccctgta 14144222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 180 - 234
Target Start/End: Complemental strand, 29445185 - 29445131
Alignment:
Q  180 aagggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtcc 234  Q
    |||||| |||| |||||||||||| ||||||||||| ||||||| ||||||||||    
T  29445185 aagggttaatatctcttttcgtccctgtaatattagcgaattccagttttagtcc 29445131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 180 - 233
Target Start/End: Original strand, 27158989 - 27159042
Alignment:
Q  180 aagggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtc 233  Q
    |||||| ||||||||||||||||| ||||||||||| ||||| | |||||||||    
T  27158989 aagggttaatacctcttttcgtccatgtaatattagcgaatttcagttttagtc 27159042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 195 - 239
Target Start/End: Original strand, 22571090 - 22571134
Alignment:
Q  195 ttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    |||| |||||||||||||||| |||||||| ||||||||||||||    
T  22571090 tttttgtccttgtaatattagcgaattccgattttagtccctgta 22571134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 239
Target Start/End: Original strand, 41001370 - 41001413
Alignment:
Q  196 tttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    |||||||| ||||||||||| ||||| |||||||||||||||||    
T  41001370 tttcgtccctgtaatattagcgaatttcggttttagtccctgta 41001413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 181 - 228
Target Start/End: Original strand, 41424515 - 41424562
Alignment:
Q  181 agggtaaatacctcttttcgtccttgtaatattagtgaattccggttt 228  Q
    ||||| |||||||||||| ||||||| |||||||| ||||||||||||    
T  41424515 agggttaatacctcttttggtccttgcaatattagcgaattccggttt 41424562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 239
Target Start/End: Complemental strand, 14412044 - 14411986
Alignment:
Q  181 agggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    ||||||||||||||||||| ||  | ||||||||  ||||| |||||||||||||||||    
T  14412044 agggtaaatacctcttttcatctctataatattaacgaatttcggttttagtccctgta 14411986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 230
Target Start/End: Original strand, 24650704 - 24650750
Alignment:
Q  184 gtaaatacctcttttcgtccttgtaatattagtgaattccggtttta 230  Q
    |||||||||||||||||||| ||||||||||  ||||| ||||||||    
T  24650704 gtaaatacctcttttcgtccctgtaatattaacgaatttcggtttta 24650750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 186 - 239
Target Start/End: Original strand, 29444810 - 29444863
Alignment:
Q  186 aaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    ||||| |||||||||||| ||||||||||  |||||| | ||||||||||||||    
T  29444810 aaatatctcttttcgtccctgtaatattaacgaattctgattttagtccctgta 29444863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 59; Significance: 4e-25; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 181 - 239
Target Start/End: Complemental strand, 19251848 - 19251790
Alignment:
Q  181 agggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19251848 agggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 19251790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 180 - 239
Target Start/End: Complemental strand, 17463471 - 17463412
Alignment:
Q  180 aagggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    ||||||||||||||||||||| || ||||||||||| |||||||||||||||||||||||    
T  17463471 aagggtaaatacctcttttcgcccctgtaatattagcgaattccggttttagtccctgta 17463412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 181 - 239
Target Start/End: Original strand, 26236126 - 26236184
Alignment:
Q  181 agggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    |||||||||| |||||||||||||||||||||||| |||||| ||||||||||||||||    
T  26236126 agggtaaatatctcttttcgtccttgtaatattagcgaattctggttttagtccctgta 26236184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 183 - 235
Target Start/End: Complemental strand, 26560932 - 26560880
Alignment:
Q  183 ggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccc 235  Q
    ||||||||||||||||||||||||||||||||| |||||||| ||||||||||    
T  26560932 ggtaaatacctcttttcgtccttgtaatattagcgaattccgattttagtccc 26560880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 180 - 239
Target Start/End: Complemental strand, 17850966 - 17850907
Alignment:
Q  180 aagggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    |||||||||||||||||||||||| ||||||||||| ||||| ||||||||||| |||||    
T  17850966 aagggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtcactgta 17850907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 180 - 239
Target Start/End: Original strand, 19251469 - 19251528
Alignment:
Q  180 aagggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    |||||| ||||||||||||||||| ||||||||||| ||||| |||||||||||||||||    
T  19251469 aagggttaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgta 19251528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 180 - 239
Target Start/End: Complemental strand, 22263573 - 22263514
Alignment:
Q  180 aagggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    |||||||||||||||||||||| | ||||||||||| ||||||||||||||||| |||||    
T  22263573 aagggtaaatacctcttttcgttcctgtaatattagcgaattccggttttagtctctgta 22263514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 182 - 236
Target Start/End: Original strand, 17850587 - 17850641
Alignment:
Q  182 gggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccct 236  Q
    |||||||||||||||||||||| ||||||||||| |||||||| |||||||||||    
T  17850587 gggtaaatacctcttttcgtccctgtaatattagcgaattccgattttagtccct 17850641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 181 - 239
Target Start/End: Original strand, 20498746 - 20498804
Alignment:
Q  181 agggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    ||||||||||||||||||||||  ||||||||||| ||||| |||||||||||||||||    
T  20498746 agggtaaatacctcttttcgtctatgtaatattagcgaattacggttttagtccctgta 20498804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 181 - 239
Target Start/End: Original strand, 39878102 - 39878159
Alignment:
Q  181 agggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    ||||||||||||| |||| |||||||||||||||| |||||||||||||||||||||||    
T  39878102 agggtaaatacctttttt-gtccttgtaatattagcgaattccggttttagtccctgta 39878159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 182 - 239
Target Start/End: Complemental strand, 23806330 - 23806273
Alignment:
Q  182 gggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    ||||||||||||||||| |||| ||||||||||| ||||| |||||||||||||||||    
T  23806330 gggtaaatacctctttttgtccctgtaatattagcgaatttcggttttagtccctgta 23806273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 182 - 239
Target Start/End: Original strand, 23854688 - 23854745
Alignment:
Q  182 gggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    |||| ||||||||||||||||| ||||||||||| ||||| |||||||||||||||||    
T  23854688 gggttaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgta 23854745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 181 - 234
Target Start/End: Complemental strand, 26236473 - 26236420
Alignment:
Q  181 agggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtcc 234  Q
    ||||||||||||||||||||||| ||||||||||| ||||| ||||||||||||    
T  26236473 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtcc 26236420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 182 - 239
Target Start/End: Original strand, 34548574 - 34548631
Alignment:
Q  182 gggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    |||||||||| ||||||||||| |||||||||||||||||  ||||||||||||||||    
T  34548574 gggtaaatacttcttttcgtccctgtaatattagtgaattttggttttagtccctgta 34548631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 182 - 239
Target Start/End: Original strand, 42670717 - 42670774
Alignment:
Q  182 gggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    |||| ||||||||||||||||| ||||||| ||| |||||||||||||||||||||||    
T  42670717 gggttaatacctcttttcgtccctgtaatagtagcgaattccggttttagtccctgta 42670774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 181 - 229
Target Start/End: Original strand, 23046706 - 23046754
Alignment:
Q  181 agggtaaatacctcttttcgtccttgtaatattagtgaattccggtttt 229  Q
    |||||||||||||||||||||||||||||||| || |||||||||||||    
T  23046706 agggtaaatacctcttttcgtccttgtaatatgagcgaattccggtttt 23046754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 182 - 234
Target Start/End: Complemental strand, 26136195 - 26136143
Alignment:
Q  182 gggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtcc 234  Q
    |||||||||||||||||||||||||||||||||  ||||| ||||||||||||    
T  26136195 gggtaaatacctcttttcgtccttgtaatattaacgaatttcggttttagtcc 26136143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 182 - 229
Target Start/End: Complemental strand, 23855072 - 23855025
Alignment:
Q  182 gggtaaatacctcttttcgtccttgtaatattagtgaattccggtttt 229  Q
    |||||||||||||||||||||| ||||||||||| |||||||||||||    
T  23855072 gggtaaatacctcttttcgtccctgtaatattagcgaattccggtttt 23855025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 185 - 239
Target Start/End: Complemental strand, 13254811 - 13254757
Alignment:
Q  185 taaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    |||||| |||||||||||| ||||||||||| ||||||||||||||||| |||||    
T  13254811 taaatatctcttttcgtccctgtaatattagcgaattccggttttagtctctgta 13254757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 182 - 239
Target Start/End: Complemental strand, 15106443 - 15106386
Alignment:
Q  182 gggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    ||||||||||||||||||||||  |||||||||| ||||| || ||||||||||||||    
T  15106443 gggtaaatacctcttttcgtccccgtaatattagcgaatttcgattttagtccctgta 15106386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 180 - 236
Target Start/End: Complemental strand, 12419102 - 12419046
Alignment:
Q  180 aagggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccct 236  Q
    |||||| |||||| ||||| |||| ||||||||||| ||||||||||||||||||||    
T  12419102 aagggttaataccacttttggtccctgtaatattagcgaattccggttttagtccct 12419046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 180 - 236
Target Start/End: Complemental strand, 12431162 - 12431106
Alignment:
Q  180 aagggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccct 236  Q
    |||||| |||||| ||||| |||| ||||||||||| ||||||||||||||||||||    
T  12431162 aagggttaataccacttttggtccctgtaatattagcgaattccggttttagtccct 12431106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 180 - 239
Target Start/End: Complemental strand, 30960051 - 30959992
Alignment:
Q  180 aagggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    |||||| |||||| ||||| |||| ||||||||||| |||||||||||||||||| ||||    
T  30960051 aagggttaataccacttttggtccctgtaatattagcgaattccggttttagtccatgta 30959992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 181 - 239
Target Start/End: Complemental strand, 23047961 - 23047903
Alignment:
Q  181 agggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    ||||||||||||| ||||||||| |||||||| || |||||||||||||  ||||||||    
T  23047961 agggtaaatacctattttcgtccctgtaatatgagcgaattccggttttgctccctgta 23047903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 193 - 239
Target Start/End: Original strand, 26135828 - 26135874
Alignment:
Q  193 tcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    ||||||||||| ||||||||||| |||||||| ||||||||||||||    
T  26135828 tcttttcgtccctgtaatattagcgaattccgattttagtccctgta 26135874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 182 - 239
Target Start/End: Original strand, 15106067 - 15106124
Alignment:
Q  182 gggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    ||||||||| ||||||||||||  |||||||||| ||||| |||||||| ||||||||    
T  15106067 gggtaaatatctcttttcgtccccgtaatattagcgaatttcggttttaatccctgta 15106124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 182 - 239
Target Start/End: Original strand, 17463092 - 17463149
Alignment:
Q  182 gggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    |||||||||  ||||||||||| | ||||||||| ||||||||||||||||| |||||    
T  17463092 gggtaaatagttcttttcgtccctataatattagcgaattccggttttagtcgctgta 17463149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 239
Target Start/End: Original strand, 30390463 - 30390516
Alignment:
Q  186 aaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    ||||| |||||||||||| ||||||||||| |||||||| ||||| ||||||||    
T  30390463 aaatatctcttttcgtccatgtaatattagcgaattccgattttaatccctgta 30390516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 182 - 239
Target Start/End: Original strand, 30958684 - 30958741
Alignment:
Q  182 gggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    |||| |||||| ||||| |||| ||||||||||| ||||| |||||||||||||||||    
T  30958684 gggttaataccacttttggtccctgtaatattagcgaatttcggttttagtccctgta 30958741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 182 - 239
Target Start/End: Complemental strand, 39878450 - 39878394
Alignment:
Q  182 gggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    ||||||||||||||||| ||||| |||||||||| ||||||| ||||| |||||||||    
T  39878450 gggtaaatacctctttttgtcct-gtaatattagcgaattccagttttcgtccctgta 39878394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 182 - 239
Target Start/End: Complemental strand, 42671097 - 42671040
Alignment:
Q  182 gggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    ||||||||||||||||| |||| |||| |||||| ||||| | |||||||||||||||    
T  42671097 gggtaaatacctctttttgtccctgtagtattagcgaatttcagttttagtccctgta 42671040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 180 - 239
Target Start/End: Complemental strand, 33290427 - 33290368
Alignment:
Q  180 aagggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    |||||| |||||| ||||| |||| ||||||||||| |||||| ||||||| ||||||||    
T  33290427 aagggttaataccgcttttggtccctgtaatattagcgaattctggttttaatccctgta 33290368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 239
Target Start/End: Original strand, 13254496 - 13254554
Alignment:
Q  181 agggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    ||||||||||||||||| ||| | ||||||||||| |||||  ||||||| ||||||||    
T  13254496 agggtaaatacctctttccgttcctgtaatattagcgaattttggttttactccctgta 13254554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 239
Target Start/End: Original strand, 26560555 - 26560613
Alignment:
Q  181 agggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    ||||| |||| |||||||||||| ||||||||||  ||||| || ||||||||||||||    
T  26560555 agggttaatatctcttttcgtccctgtaatattaacgaatttcgattttagtccctgta 26560613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 194 - 239
Target Start/End: Complemental strand, 13284779 - 13284734
Alignment:
Q  194 cttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    ||||| |||| ||||||||||| ||||| |||||||||||||||||    
T  13284779 cttttggtccctgtaatattagcgaatttcggttttagtccctgta 13284734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 239
Target Start/End: Complemental strand, 44099000 - 44098943
Alignment:
Q  182 gggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    ||||||||| |||||||||||| |||||||| || |||||| |||||| || ||||||    
T  44099000 gggtaaatatctcttttcgtccctgtaatatgagcgaattctggttttggttcctgta 44098943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 195 - 239
Target Start/End: Original strand, 33290062 - 33290106
Alignment:
Q  195 ttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    |||| |||| ||||||||||| ||||||| |||||||||||||||    
T  33290062 ttttggtccctgtaatattagcgaattccagttttagtccctgta 33290106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 56; Significance: 2e-23; HSPs: 51)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 180 - 239
Target Start/End: Original strand, 45969913 - 45969972
Alignment:
Q  180 aagggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  45969913 aagggtaaatacctcttttcgtccctgtaatattagtgaattccggttttagtccctgta 45969972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 180 - 239
Target Start/End: Original strand, 9266973 - 9267032
Alignment:
Q  180 aagggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  9266973 aagggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgta 9267032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 180 - 239
Target Start/End: Complemental strand, 14262416 - 14262357
Alignment:
Q  180 aagggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  14262416 aagggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgta 14262357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 180 - 239
Target Start/End: Complemental strand, 45970296 - 45970237
Alignment:
Q  180 aagggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    |||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||    
T  45970296 aagggtaaatacctcttttcgtccctgtaatattagtgaatttcggttttagtccctgta 45970237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 181 - 239
Target Start/End: Complemental strand, 9267353 - 9267295
Alignment:
Q  181 agggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    ||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||    
T  9267353 agggtaaatacctcttttcgtccttgtaatattagcgaattccgattttagtccctgta 9267295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 181 - 239
Target Start/End: Complemental strand, 14171965 - 14171907
Alignment:
Q  181 agggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  14171965 agggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgta 14171907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 181 - 239
Target Start/End: Original strand, 19112763 - 19112821
Alignment:
Q  181 agggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  19112763 agggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgta 19112821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 180 - 239
Target Start/End: Original strand, 11003730 - 11003789
Alignment:
Q  180 aagggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    ||||||||||||||||||| |||||||||||||||  |||||||||||||||||||||||    
T  11003730 aagggtaaatacctctttttgtccttgtaatattaccgaattccggttttagtccctgta 11003789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 180 - 239
Target Start/End: Original strand, 16721989 - 16722048
Alignment:
Q  180 aagggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||||||||| |||||    
T  16721989 aagggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtcactgta 16722048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 180 - 239
Target Start/End: Complemental strand, 30500420 - 30500361
Alignment:
Q  180 aagggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    |||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||    
T  30500420 aagggtaaatacctcttttcgtccctgtaatattagcgaattccagttttagtccctgta 30500361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 181 - 239
Target Start/End: Complemental strand, 27946244 - 27946186
Alignment:
Q  181 agggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    |||||||||||||||||||||||  |||||||||| |||||||||||||||||||||||    
T  27946244 agggtaaatacctcttttcgtcccagtaatattagcgaattccggttttagtccctgta 27946186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 181 - 239
Target Start/End: Original strand, 35995677 - 35995735
Alignment:
Q  181 agggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    ||||||||||||||||||||| | ||||||||||| |||||||||||||||||||||||    
T  35995677 agggtaaatacctcttttcgttcctgtaatattagcgaattccggttttagtccctgta 35995735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 181 - 239
Target Start/End: Original strand, 49986526 - 49986584
Alignment:
Q  181 agggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||||||||| |||||    
T  49986526 agggtaaatacctcttttcgtccctgtaatattagagaattccggttttagtcactgta 49986584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 182 - 239
Target Start/End: Original strand, 19720333 - 19720390
Alignment:
Q  182 gggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    ||||||||| |||||||||||| ||||||||||| |||||||||||||||||||||||    
T  19720333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttagtccctgta 19720390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 180 - 239
Target Start/End: Complemental strand, 35996055 - 35995996
Alignment:
Q  180 aagggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    |||||||||||| ||||||||||| ||||||||||| |||||||| ||||||||||||||    
T  35996055 aagggtaaatacatcttttcgtccctgtaatattagcgaattccgattttagtccctgta 35995996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 181 - 239
Target Start/End: Complemental strand, 16722370 - 16722312
Alignment:
Q  181 agggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    ||||||||||||||||||||||| ||||||||||| ||||| | |||||||||||||||    
T  16722370 agggtaaatacctcttttcgtccctgtaatattagcgaatttcagttttagtccctgta 16722312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 182 - 239
Target Start/End: Original strand, 5800605 - 5800662
Alignment:
Q  182 gggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    |||||||||||||||||||||| ||||||||||  ||||| |||||||||||||||||    
T  5800605 gggtaaatacctcttttcgtccctgtaatattaacgaatttcggttttagtccctgta 5800662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 182 - 239
Target Start/End: Complemental strand, 14162248 - 14162191
Alignment:
Q  182 gggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    |||| |||||||||||| |||| ||||||||||| |||||||||||||||||||||||    
T  14162248 gggttaatacctctttttgtccctgtaatattagcgaattccggttttagtccctgta 14162191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 182 - 239
Target Start/End: Complemental strand, 19113143 - 19113086
Alignment:
Q  182 gggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    |||||||||||||||||||||| | ||||||||  |||||||||||||||||||||||    
T  19113143 gggtaaatacctcttttcgtccctataatattaacgaattccggttttagtccctgta 19113086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 180 - 237
Target Start/End: Complemental strand, 24490299 - 24490242
Alignment:
Q  180 aagggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctg 237  Q
    ||||||||||| || ||||| ||| |||||||||||||||||||||||||||||||||    
T  24490299 aagggtaaatatcttttttcctccctgtaatattagtgaattccggttttagtccctg 24490242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 187 - 239
Target Start/End: Original strand, 27946114 - 27946166
Alignment:
Q  187 aatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    ||||||||||||||||| ||||||||||| ||||| |||||||||||||||||    
T  27946114 aatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgta 27946166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 183 - 239
Target Start/End: Complemental strand, 52553065 - 52553009
Alignment:
Q  183 ggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    ||||||||| ||||||||||||||||||||||| ||||||  |||||||||||||||    
T  52553065 ggtaaatacatcttttcgtccttgtaatattagcgaattctagttttagtccctgta 52553009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 180 - 239
Target Start/End: Original strand, 14262034 - 14262093
Alignment:
Q  180 aagggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    |||||| |||| |||||||||||| ||||||||||| |||||||||||||||||| ||||    
T  14262034 aagggttaatatctcttttcgtccctgtaatattagcgaattccggttttagtccttgta 14262093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 180 - 239
Target Start/End: Complemental strand, 17465747 - 17465688
Alignment:
Q  180 aagggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    |||||||||||||||||||||||||||||||||||| ||||| | |||||| || |||||    
T  17465747 aagggtaaatacctcttttcgtccttgtaatattagcgaatttcagttttaatctctgta 17465688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 180 - 239
Target Start/End: Original strand, 20853693 - 20853752
Alignment:
Q  180 aagggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    |||||||||||||||||||||||| ||||||||||| ||||| ||||||||  |||||||    
T  20853693 aagggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttaaaccctgta 20853752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 180 - 239
Target Start/End: Original strand, 30500041 - 30500100
Alignment:
Q  180 aagggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    |||||| ||||||||||||| ||| ||||||||||| ||||| |||||||||||||||||    
T  30500041 aagggttaatacctcttttcatccctgtaatattagcgaatttcggttttagtccctgta 30500100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 181 - 239
Target Start/End: Original strand, 33372405 - 33372463
Alignment:
Q  181 agggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    |||||||||| |||||||||||| ||||||||||| |||||| ||||||||| ||||||    
T  33372405 agggtaaatatctcttttcgtccctgtaatattagcgaattctggttttagttcctgta 33372463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 181 - 239
Target Start/End: Original strand, 43572388 - 43572446
Alignment:
Q  181 agggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    ||||||||||| ||||||||| | ||||||||||| ||||| |||||||||||||||||    
T  43572388 agggtaaatacatcttttcgttcctgtaatattagcgaatttcggttttagtccctgta 43572446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 181 - 239
Target Start/End: Complemental strand, 49986907 - 49986849
Alignment:
Q  181 agggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    |||||||||||||||||||||||  |||||||||| ||||| |||||||||| ||||||    
T  49986907 agggtaaatacctcttttcgtcccagtaatattagcgaatttcggttttagttcctgta 49986849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 182 - 239
Target Start/End: Complemental strand, 5800982 - 5800926
Alignment:
Q  182 gggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    |||| ||||||||||||||||| ||||||||||| ||||||||| |||||||||||||    
T  5800982 gggttaatacctcttttcgtccctgtaatattagcgaattccgg-tttagtccctgta 5800926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 182 - 239
Target Start/End: Original strand, 15328463 - 15328520
Alignment:
Q  182 gggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    |||||||||||||||||||| | |||||||||||| |||| || ||||||||||||||    
T  15328463 gggtaaatacctcttttcgttcctgtaatattagtaaatttcgtttttagtccctgta 15328520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 181 - 234
Target Start/End: Complemental strand, 20854074 - 20854021
Alignment:
Q  181 agggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtcc 234  Q
    |||||||||| |||||||||||| ||||||||||| ||||| ||||||||||||    
T  20854074 agggtaaatatctcttttcgtccatgtaatattagcgaatttcggttttagtcc 20854021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 180 - 239
Target Start/End: Original strand, 3424772 - 3424831
Alignment:
Q  180 aagggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    |||||| |||||||||||| |||| ||||||||||| || |||||||||| |||||||||    
T  3424772 aagggttaatacctcttttggtccctgtaatattagcgatttccggttttggtccctgta 3424831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 180 - 239
Target Start/End: Complemental strand, 35741964 - 35741905
Alignment:
Q  180 aagggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    |||||| |||||| ||||| |||| ||||||||||| ||||||| |||||||||||||||    
T  35741964 aagggttaataccacttttggtccctgtaatattagcgaattccagttttagtccctgta 35741905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 180 - 239
Target Start/End: Complemental strand, 47575651 - 47575592
Alignment:
Q  180 aagggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    |||||||||||||||| ||||||   ||||||| ||||||||| ||||||||||||||||    
T  47575651 aagggtaaatacctctattcgtctccgtaatatgagtgaattctggttttagtccctgta 47575592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 181 - 235
Target Start/End: Complemental strand, 3426027 - 3425973
Alignment:
Q  181 agggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccc 235  Q
    ||||| |||||||||||| | || ||||||||||| |||||||||||||||||||    
T  3426027 agggttaatacctcttttggcccctgtaatattagcgaattccggttttagtccc 3425973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 182 - 232
Target Start/End: Original strand, 14161871 - 14161921
Alignment:
Q  182 gggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagt 232  Q
    ||||||||| |||||||||||| ||||||||||| ||||||| ||||||||    
T  14161871 gggtaaatatctcttttcgtccctgtaatattagcgaattccagttttagt 14161921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 180 - 230
Target Start/End: Original strand, 14171585 - 14171635
Alignment:
Q  180 aagggtaaatacctcttttcgtccttgtaatattagtgaattccggtttta 230  Q
    ||||||||||||| |||||||||| ||||||||||| |||||||| |||||    
T  14171585 aagggtaaataccacttttcgtccctgtaatattagcgaattccgatttta 14171635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 181 - 239
Target Start/End: Original strand, 17465366 - 17465424
Alignment:
Q  181 agggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    |||||||||||||||||| |||||| ||||||||| |||||| | ||||||| ||||||    
T  17465366 agggtaaatacctctttttgtccttttaatattagcgaattctgattttagtacctgta 17465424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 182 - 239
Target Start/End: Original strand, 4204709 - 4204766
Alignment:
Q  182 gggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    ||||||| |||||||||||||| |||||||||| |||||| | |||||||| ||||||    
T  4204709 gggtaaagacctcttttcgtccctgtaatattaatgaatttcagttttagttcctgta 4204766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 180 - 221
Target Start/End: Original strand, 21632899 - 21632940
Alignment:
Q  180 aagggtaaatacctcttttcgtccttgtaatattagtgaatt 221  Q
    |||||||||||||||||||||||| ||||||||||| |||||    
T  21632899 aagggtaaatacctcttttcgtccctgtaatattagcgaatt 21632940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 181 - 238
Target Start/End: Complemental strand, 33372783 - 33372726
Alignment:
Q  181 agggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgt 238  Q
    |||||||||||||||||||||||  |||||||||| ||||| || ||||||| |||||    
T  33372783 agggtaaatacctcttttcgtccccgtaatattagcgaatttcgattttagttcctgt 33372726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 185 - 237
Target Start/End: Complemental strand, 17649384 - 17649332
Alignment:
Q  185 taaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctg 237  Q
    |||||||||||||||| || ||||||| ||| |||||||||||||||| ||||    
T  17649384 taaatacctcttttcgaccctgtaatactagcgaattccggttttagttcctg 17649332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 181 - 236
Target Start/End: Complemental strand, 21633275 - 21633220
Alignment:
Q  181 agggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccct 236  Q
    ||||||||||||| || |||||| ||||||||||| ||||| | ||||||||||||    
T  21633275 agggtaaatacctattctcgtccctgtaatattagcgaatttcagttttagtccct 21633220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 239
Target Start/End: Complemental strand, 36991038 - 36990980
Alignment:
Q  181 agggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    ||||| |||||  ||||| |||| ||||||||||| ||||| |||||||||||||||||    
T  36991038 agggttaatactacttttggtccctgtaatattagcgaatttcggttttagtccctgta 36990980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 239
Target Start/End: Complemental strand, 37016478 - 37016420
Alignment:
Q  181 agggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    ||||| |||||  ||||| |||| ||||||||||| ||||| |||||||||||||||||    
T  37016478 agggttaatactacttttggtccctgtaatattagcgaatttcggttttagtccctgta 37016420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 239
Target Start/End: Original strand, 38283553 - 38283607
Alignment:
Q  185 taaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    |||||| |||||||| ||| ||||||||||  |||||||||||||||||| ||||    
T  38283553 taaatatctcttttcatccctgtaatattaacgaattccggttttagtccttgta 38283607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 239
Target Start/End: Complemental strand, 43572769 - 43572711
Alignment:
Q  181 agggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    ||||||||||||||||||| ||| |||||||||    ||||||||||||||| ||||||    
T  43572769 agggtaaatacctcttttcatccctgtaatattgacaaattccggttttagttcctgta 43572711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 236
Target Start/End: Original strand, 45003496 - 45003550
Alignment:
Q  182 gggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccct 236  Q
    ||||||||| ||||||||||||  ||||||||||  ||||||||||| |||||||    
T  45003496 gggtaaatatctcttttcgtccccgtaatattagcaaattccggtttcagtccct 45003550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 239
Target Start/End: Complemental strand, 45003874 - 45003816
Alignment:
Q  181 agggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    ||||||||||  || |||||||| ||||||||||| ||||| |||||||||| ||||||    
T  45003874 agggtaaatatatcgtttcgtccctgtaatattagcgaatttcggttttagttcctgta 45003816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 194 - 235
Target Start/End: Original strand, 35740829 - 35740870
Alignment:
Q  194 cttttcgtccttgtaatattagtgaattccggttttagtccc 235  Q
    ||||| |||| ||||||||||| |||||||||||||||||||    
T  35740829 cttttggtccctgtaatattagcgaattccggttttagtccc 35740870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 54; Significance: 4e-22; HSPs: 42)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 180 - 237
Target Start/End: Original strand, 41946963 - 41947020
Alignment:
Q  180 aagggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctg 237  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  41946963 aagggtaaatacctcttttcgtccctgtaatattagtgaattccggttttagtccctg 41947020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 181 - 239
Target Start/End: Complemental strand, 31218360 - 31218302
Alignment:
Q  181 agggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  31218360 agggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgta 31218302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 183 - 239
Target Start/End: Complemental strand, 15641093 - 15641037
Alignment:
Q  183 ggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| | ||||||    
T  15641093 ggtaaatacctcttttcgtccttgtaatattagtgaattccggttttaattcctgta 15641037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 181 - 239
Target Start/End: Original strand, 38573968 - 38574026
Alignment:
Q  181 agggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    ||||||||||||||||||||||| |||||||||||||||||||| ||||| ||||||||    
T  38573968 agggtaaatacctcttttcgtccatgtaatattagtgaattccgattttaatccctgta 38574026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 184 - 239
Target Start/End: Original strand, 9618982 - 9619037
Alignment:
Q  184 gtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    |||||||||| ||||||||| ||||||||||| |||||||||||||||||||||||    
T  9618982 gtaaatacctattttcgtccatgtaatattagcgaattccggttttagtccctgta 9619037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 180 - 239
Target Start/End: Complemental strand, 9619359 - 9619300
Alignment:
Q  180 aagggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    ||||||||||||||||||| |||| ||||||||||| |||||| ||||||||||||||||    
T  9619359 aagggtaaatacctctttttgtccctgtaatattagcgaattctggttttagtccctgta 9619300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 180 - 239
Target Start/End: Complemental strand, 31944330 - 31944271
Alignment:
Q  180 aagggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    |||||||||||| ||||||||||||||||||||||| ||||| ||||||||||| |||||    
T  31944330 aagggtaaatacttcttttcgtccttgtaatattagcgaatttcggttttagtctctgta 31944271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 180 - 239
Target Start/End: Complemental strand, 37013086 - 37013027
Alignment:
Q  180 aagggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    ||||||||||||||| |||||||| ||||||||||| |||||| ||||||||||||||||    
T  37013086 aagggtaaatacctcatttcgtccctgtaatattagcgaattctggttttagtccctgta 37013027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 180 - 239
Target Start/End: Complemental strand, 46046803 - 46046745
Alignment:
Q  180 aagggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    |||||||||||||| ||||||||| ||||||||||| |||||||||||||||||||||||    
T  46046803 aagggtaaatacct-ttttcgtccctgtaatattagcgaattccggttttagtccctgta 46046745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 180 - 239
Target Start/End: Original strand, 48259821 - 48259880
Alignment:
Q  180 aagggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    ||||||||||| |||||||||||| ||||||||||| |||||||||||||| ||||||||    
T  48259821 aagggtaaatatctcttttcgtccctgtaatattagcgaattccggttttaatccctgta 48259880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 3018014 - 3018064
Alignment:
Q  185 taaatacctcttttcgtccttgtaatattagtgaattccggttttagtccc 235  Q
    ||||||||||||||||||| ||||||||||| |||||||||||||||||||    
T  3018014 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccc 3018064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 181 - 239
Target Start/End: Complemental strand, 9397077 - 9397019
Alignment:
Q  181 agggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    ||||||||||| ||||||||||| |||||||||||  ||||||||||||||||||||||    
T  9397077 agggtaaatacttcttttcgtccctgtaatattagcaaattccggttttagtccctgta 9397019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 181 - 239
Target Start/End: Original strand, 46046429 - 46046487
Alignment:
Q  181 agggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    ||||||||||||| ||||||||| ||||||||||| |||||||| ||||||||||||||    
T  46046429 agggtaaataccttttttcgtccctgtaatattagcgaattccgattttagtccctgta 46046487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 183 - 239
Target Start/End: Original strand, 9516611 - 9516667
Alignment:
Q  183 ggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    |||||||| |||||||||||| ||||||||||| |||||||||||||||||| ||||    
T  9516611 ggtaaatatctcttttcgtccctgtaatattagcgaattccggttttagtccttgta 9516667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 183 - 239
Target Start/End: Original strand, 35376164 - 35376220
Alignment:
Q  183 ggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    ||||||||||| ||||||||| ||||||||||| |||||| ||||||||||||||||    
T  35376164 ggtaaatacctattttcgtccctgtaatattagcgaattctggttttagtccctgta 35376220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 180 - 239
Target Start/End: Complemental strand, 31090441 - 31090382
Alignment:
Q  180 aagggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    ||||||||||| |||||||||||| ||||||||||| ||||| || ||||||||||||||    
T  31090441 aagggtaaatatctcttttcgtccctgtaatattagcgaatttcgattttagtccctgta 31090382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 181 - 235
Target Start/End: Original strand, 3273620 - 3273674
Alignment:
Q  181 agggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccc 235  Q
    |||||||||| |||||||||||| ||||||||||| |||||||| ||||||||||    
T  3273620 agggtaaatatctcttttcgtccctgtaatattagcgaattccgattttagtccc 3273674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 185 - 239
Target Start/End: Original strand, 13131943 - 13131997
Alignment:
Q  185 taaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    ||||||||||||||||||||||||||||||  ||||| | |||||||||||||||    
T  13131943 taaatacctcttttcgtccttgtaatattaacgaatttctgttttagtccctgta 13131997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 181 - 239
Target Start/End: Original strand, 31943949 - 31944006
Alignment:
Q  181 agggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    ||||||||||| ||||||||||| ||||||||||| |||||||||||||||| ||||||    
T  31943949 agggtaaatac-tcttttcgtccctgtaatattagcgaattccggttttagttcctgta 31944006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 185 - 239
Target Start/End: Complemental strand, 38574343 - 38574289
Alignment:
Q  185 taaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    ||||||||| ||||||||| ||||||||||| |||||| ||||||||||||||||    
T  38574343 taaataccttttttcgtccctgtaatattagcgaattctggttttagtccctgta 38574289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 182 - 239
Target Start/End: Complemental strand, 9516988 - 9516931
Alignment:
Q  182 gggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    ||||||||| |||||||||||| ||||||||||| ||||| ||||||||||| |||||    
T  9516988 gggtaaatatctcttttcgtccctgtaatattagcgaatttcggttttagtctctgta 9516931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 239
Target Start/End: Original strand, 15640724 - 15640773
Alignment:
Q  190 acctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    |||||||||||||| ||||||||||| |||||||||||||||| ||||||    
T  15640724 acctcttttcgtccctgtaatattagcgaattccggttttagttcctgta 15640773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 182 - 239
Target Start/End: Complemental strand, 26252615 - 26252558
Alignment:
Q  182 gggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    ||||||||| |||||||||||| ||||||||||| ||||||| |||||||| ||||||    
T  26252615 gggtaaatatctcttttcgtccctgtaatattagcgaattccagttttagttcctgta 26252558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 182 - 239
Target Start/End: Original strand, 31090060 - 31090117
Alignment:
Q  182 gggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    |||||||||| |||||| |||| ||||||||||||||||| || ||||||||||||||    
T  31090060 gggtaaatacttctttttgtccctgtaatattagtgaatttcgattttagtccctgta 31090117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 183 - 239
Target Start/End: Original strand, 34063983 - 34064039
Alignment:
Q  183 ggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    ||||||||||||||||||||| ||||||||||  ||||||  |||||||||||||||    
T  34063983 ggtaaatacctcttttcgtccctgtaatattaacgaattctagttttagtccctgta 34064039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 182 - 234
Target Start/End: Complemental strand, 41947232 - 41947180
Alignment:
Q  182 gggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtcc 234  Q
    ||||||||| |||||||||||| ||||||||||| ||||| ||||||||||||    
T  41947232 gggtaaatatctcttttcgtccctgtaatattagcgaatttcggttttagtcc 41947180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 180 - 239
Target Start/End: Original strand, 12904745 - 12904804
Alignment:
Q  180 aagggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    ||||||||||| |||||||||||| | ||||||||| |||||  ||||||||||||||||    
T  12904745 aagggtaaatatctcttttcgtccctataatattagcgaattttggttttagtccctgta 12904804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 180 - 239
Target Start/End: Complemental strand, 18667670 - 18667611
Alignment:
Q  180 aagggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    |||||| ||||||||||||||||| ||||||||||| ||||||| |||||| ||| ||||    
T  18667670 aagggttaatacctcttttcgtccctgtaatattagcgaattccagttttaatccttgta 18667611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 180 - 239
Target Start/End: Complemental strand, 35376507 - 35376448
Alignment:
Q  180 aagggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    |||| |||||| |||||||||||| |||||||||||  |||||| |||||||||||||||    
T  35376507 aaggataaatatctcttttcgtccctgtaatattagcaaattccagttttagtccctgta 35376448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 180 - 239
Target Start/End: Original strand, 36887678 - 36887737
Alignment:
Q  180 aagggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    |||||| |||||||||||| |||| ||||||||||| |||||  ||||||||||||||||    
T  36887678 aagggttaatacctcttttggtccctgtaatattagcgaattttggttttagtccctgta 36887737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 187 - 230
Target Start/End: Complemental strand, 48580239 - 48580196
Alignment:
Q  187 aatacctcttttcgtccttgtaatattagtgaattccggtttta 230  Q
    ||||||||||||||||| ||||||||||| ||||||||||||||    
T  48580239 aatacctcttttcgtccctgtaatattagcgaattccggtttta 48580196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 181 - 239
Target Start/End: Complemental strand, 3018389 - 3018331
Alignment:
Q  181 agggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    ||||| |||| |||||||||||| ||||||||||  ||||| |||||||||||||||||    
T  3018389 agggttaatatctcttttcgtccctgtaatattaacgaatttcggttttagtccctgta 3018331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 182 - 236
Target Start/End: Complemental strand, 3273996 - 3273943
Alignment:
Q  182 gggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccct 236  Q
    ||||||||||||||||||||||  |||||||||| ||||| ||||||||||||||    
T  3273996 gggtaaatacctcttttcgtccc-gtaatattagcgaatttcggttttagtccct 3273943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 185 - 238
Target Start/End: Original strand, 9396702 - 9396755
Alignment:
Q  185 taaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgt 238  Q
    ||||||||||||||||||| ||||||||||| ||||| || |||||||| ||||    
T  9396702 taaatacctcttttcgtccctgtaatattagcgaatttcgattttagtctctgt 9396755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 181 - 234
Target Start/End: Complemental strand, 13132318 - 13132265
Alignment:
Q  181 agggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtcc 234  Q
    ||||||||||||| ||||||||| ||||||||||| ||||| || |||||||||    
T  13132318 agggtaaatacctattttcgtccctgtaatattagcgaatttcgattttagtcc 13132265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 185 - 233
Target Start/End: Original strand, 7819018 - 7819066
Alignment:
Q  185 taaatacctcttttcgtccttgtaatattagtgaattccggttttagtc 233  Q
    |||||||||||||||| || | ||||||||| |||||||||||||||||    
T  7819018 taaatacctcttttcgaccatataatattagcgaattccggttttagtc 7819066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 187 - 222
Target Start/End: Original strand, 37012712 - 37012747
Alignment:
Q  187 aatacctcttttcgtccttgtaatattagtgaattc 222  Q
    ||||||||||||||||||||||||||||| ||||||    
T  37012712 aatacctcttttcgtccttgtaatattagcgaattc 37012747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 180 - 239
Target Start/End: Original strand, 53896444 - 53896503
Alignment:
Q  180 aagggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    |||||| ||||||||||||  ||  |||||||| || |||||||||||||||||||||||    
T  53896444 aagggttaatacctcttttgatcgctgtaatatgagcgaattccggttttagtccctgta 53896503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 239
Target Start/End: Complemental strand, 43313589 - 43313532
Alignment:
Q  182 gggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    |||| |||||| ||||| |||  ||||||||||| |||||| ||||||||||||||||    
T  43313589 gggttaataccacttttggtctctgtaatattagcgaattctggttttagtccctgta 43313532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 187 - 239
Target Start/End: Original strand, 4355887 - 4355939
Alignment:
Q  187 aatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    |||||||||||| || | | ||||||||| |||||||||||||||| ||||||    
T  4355887 aatacctctttttgttcatataatattagcgaattccggttttagttcctgta 4355939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 187 - 239
Target Start/End: Complemental strand, 4356253 - 4356201
Alignment:
Q  187 aatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    ||||||||||||| ||| ||||||||||| ||||| |||||||| || |||||    
T  4356253 aatacctcttttcatccctgtaatattagcgaatttcggttttaatctctgta 4356201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 233
Target Start/End: Complemental strand, 7819399 - 7819347
Alignment:
Q  181 agggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtc 233  Q
    |||||||||| || |||||||||  |||||||||| ||||| |||||||||||    
T  7819399 agggtaaatatcttttttcgtcccggtaatattagcgaatttcggttttagtc 7819347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 52; Significance: 6e-21; HSPs: 2)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 180 - 239
Target Start/End: Original strand, 4560 - 4619
Alignment:
Q  180 aagggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    |||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||    
T  4560 aagggtaaatacctcttttcgtccttgtaatattagcgaattccgattttagtccctgta 4619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 181 - 239
Target Start/End: Complemental strand, 4941 - 4883
Alignment:
Q  181 agggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    ||||||||||||||||||||||| |||||||||||  ||||||||||||| ||||||||    
T  4941 agggtaaatacctcttttcgtccctgtaatattagcaaattccggttttaatccctgta 4883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 52; Significance: 6e-21; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 180 - 239
Target Start/End: Original strand, 10108368 - 10108427
Alignment:
Q  180 aagggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  10108368 aagggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgta 10108427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 180 - 239
Target Start/End: Complemental strand, 21148316 - 21148257
Alignment:
Q  180 aagggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    |||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||    
T  21148316 aagggtaaatacctcttttcgtctctgtaatattagtgaattccggttttagtccctgta 21148257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 180 - 239
Target Start/End: Complemental strand, 30789887 - 30789828
Alignment:
Q  180 aagggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    |||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||    
T  30789887 aagggtaaatacctcttttcgtccctgtaatattagtaaattccggttttagtccctgta 30789828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 181 - 239
Target Start/End: Original strand, 5554868 - 5554926
Alignment:
Q  181 agggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  5554868 agggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgta 5554926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 182 - 239
Target Start/End: Original strand, 43851665 - 43851722
Alignment:
Q  182 gggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    |||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  43851665 gggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgta 43851722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 181 - 239
Target Start/End: Complemental strand, 10171522 - 10171464
Alignment:
Q  181 agggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    |||||||||||| |||||||||| ||||||||||| |||||||||||||||||||||||    
T  10171522 agggtaaataccgcttttcgtccctgtaatattagcgaattccggttttagtccctgta 10171464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 181 - 239
Target Start/End: Original strand, 17622889 - 17622947
Alignment:
Q  181 agggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    ||||||||||||||||||||||||||||||||||| ||||| | |||||||||||||||    
T  17622889 agggtaaatacctcttttcgtccttgtaatattagcgaatttcagttttagtccctgta 17622947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 182 - 239
Target Start/End: Original strand, 14820295 - 14820352
Alignment:
Q  182 gggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    |||||||||||||||||||||| ||||||||||| |||||||||||||||| ||||||    
T  14820295 gggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagttcctgta 14820352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 182 - 239
Target Start/End: Complemental strand, 18044205 - 18044148
Alignment:
Q  182 gggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    |||||||||||||||||||||| ||||||||||| |||||||||||||||||| ||||    
T  18044205 gggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccatgta 18044148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 180 - 239
Target Start/End: Complemental strand, 7689903 - 7689844
Alignment:
Q  180 aagggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    |||||||||||||||||||||||| ||||||||||| |||||||| ||||||||| ||||    
T  7689903 aagggtaaatacctcttttcgtccctgtaatattagcgaattccgattttagtccgtgta 7689844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 180 - 239
Target Start/End: Complemental strand, 10108750 - 10108691
Alignment:
Q  180 aagggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    |||||| ||||||||||||||||| |||||||||||  ||||||||||||||||||||||    
T  10108750 aagggttaatacctcttttcgtccctgtaatattagcaaattccggttttagtccctgta 10108691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 180 - 239
Target Start/End: Complemental strand, 14820674 - 14820615
Alignment:
Q  180 aagggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    |||||| |||||||||||| |||| ||||||||||| |||||||||||||||||||||||    
T  14820674 aagggttaatacctcttttagtccctgtaatattagcgaattccggttttagtccctgta 14820615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 180 - 239
Target Start/End: Original strand, 21147934 - 21147993
Alignment:
Q  180 aagggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    |||||| |||||||||||| |||| ||||||||||| |||||||||||||||||||||||    
T  21147934 aagggttaatacctctttttgtccctgtaatattagcgaattccggttttagtccctgta 21147993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 180 - 236
Target Start/End: Complemental strand, 26137064 - 26137008
Alignment:
Q  180 aagggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccct 236  Q
    ||||||||||||| |||||||||| ||||||||||||||||| | ||||||||||||    
T  26137064 aagggtaaataccacttttcgtccctgtaatattagtgaatttcagttttagtccct 26137008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 180 - 239
Target Start/End: Original strand, 26136683 - 26136742
Alignment:
Q  180 aagggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    |||||| ||||||||||||||| | ||||||||||| ||||||| |||||||||||||||    
T  26136683 aagggtgaatacctcttttcgttcctgtaatattagcgaattccagttttagtccctgta 26136742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 180 - 239
Target Start/End: Complemental strand, 43481695 - 43481636
Alignment:
Q  180 aagggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    ||||||||||| |||||||||||  ||||||||||| ||||||||||||||||| |||||    
T  43481695 aagggtaaatatctcttttcgtcactgtaatattagcgaattccggttttagtctctgta 43481636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 181 - 239
Target Start/End: Original strand, 7689523 - 7689581
Alignment:
Q  181 agggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    ||||||||||||||||||||||| ||||||||||| ||||| ||| |||||||| ||||    
T  7689523 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggctttagtccttgta 7689581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 181 - 239
Target Start/End: Original strand, 35367409 - 35367467
Alignment:
Q  181 agggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    |||||||||||||||||| |||| || |||||||| |||||||||||||| ||||||||    
T  35367409 agggtaaatacctcttttggtccctgcaatattagcgaattccggttttaatccctgta 35367467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 181 - 239
Target Start/End: Complemental strand, 40487793 - 40487735
Alignment:
Q  181 agggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    ||||| |||||| ||||| |||||||||||||||| ||||||| |||||||||||||||    
T  40487793 agggttaataccacttttggtccttgtaatattagcgaattccagttttagtccctgta 40487735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 182 - 239
Target Start/End: Complemental strand, 14767882 - 14767825
Alignment:
Q  182 gggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    |||||||||||||||||||| | |||||||||||| |||| || ||||||||||||||    
T  14767882 gggtaaatacctcttttcgttcctgtaatattagtaaatttcgtttttagtccctgta 14767825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 239
Target Start/End: Original strand, 42112993 - 42113042
Alignment:
Q  190 acctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    |||||||||||||| ||||||||||| |||||||| ||||||||||||||    
T  42112993 acctcttttcgtccctgtaatattagcgaattccgattttagtccctgta 42113042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 180 - 236
Target Start/End: Complemental strand, 20877125 - 20877069
Alignment:
Q  180 aagggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccct 236  Q
    |||||| |||||||||||| |||| |||||||| || ||||||||||||||||||||    
T  20877125 aagggttaatacctcttttggtccctgtaatatgagcgaattccggttttagtccct 20877069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 180 - 239
Target Start/End: Complemental strand, 5555249 - 5555190
Alignment:
Q  180 aagggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    |||||| || |||||||||||||| ||||||||||| ||||| ||||||||||| |||||    
T  5555249 aagggttaacacctcttttcgtccctgtaatattagcgaatttcggttttagtctctgta 5555190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 180 - 239
Target Start/End: Complemental strand, 42113361 - 42113302
Alignment:
Q  180 aagggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    |||||||||||| ||||||||||| ||||||||||  ||||| |||||||||| ||||||    
T  42113361 aagggtaaatacatcttttcgtccctgtaatattaacgaatttcggttttagttcctgta 42113302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 181 - 239
Target Start/End: Complemental strand, 2583700 - 2583642
Alignment:
Q  181 agggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    |||||||||| ||||||||||||| |||||||||| ||||||  ||||||| |||||||    
T  2583700 agggtaaatatctcttttcgtcctcgtaatattagcgaattctagttttaggccctgta 2583642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 193 - 239
Target Start/End: Original strand, 30789519 - 30789565
Alignment:
Q  193 tcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    ||||||||||| ||||||||||| |||||||| ||||||||||||||    
T  30789519 tcttttcgtccctgtaatattagcgaattccgattttagtccctgta 30789565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 181 - 233
Target Start/End: Complemental strand, 42606132 - 42606080
Alignment:
Q  181 agggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtc 233  Q
    |||||||||| ||||||| |||| ||||||||||| |||||| ||||||||||    
T  42606132 agggtaaatatctctttttgtccctgtaatattagcgaattctggttttagtc 42606080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 180 - 239
Target Start/End: Complemental strand, 17623266 - 17623207
Alignment:
Q  180 aagggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    |||| ||||||||||||||| ||| |||||||||||  ||||| ||||||||| ||||||    
T  17623266 aaggttaaatacctcttttcatccctgtaatattagccaattctggttttagtgcctgta 17623207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 239
Target Start/End: Original strand, 1949651 - 1949709
Alignment:
Q  181 agggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    ||||| |||||||||||| |||| |||||||| |  |||||||||||||||| ||||||    
T  1949651 agggttaatacctcttttggtccctgtaatatgatcgaattccggttttagtgcctgta 1949709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 206 - 239
Target Start/End: Original strand, 21144598 - 21144631
Alignment:
Q  206 gtaatattagtgaattccggttttagtccctgta 239  Q
    |||||||||| |||||||||||||||||||||||    
T  21144598 gtaatattagagaattccggttttagtccctgta 21144631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 236
Target Start/End: Complemental strand, 8106132 - 8106076
Alignment:
Q  180 aagggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccct 236  Q
    |||||| |||||||||||| ||| ||| ||||| || ||||||| ||||||||||||    
T  8106132 aagggttaatacctcttttggtcattgcaatatgagcgaattccagttttagtccct 8106076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 52; Significance: 6e-21; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 180 - 239
Target Start/End: Original strand, 28218176 - 28218235
Alignment:
Q  180 aagggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  28218176 aagggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgta 28218235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 181 - 239
Target Start/End: Complemental strand, 28218542 - 28218484
Alignment:
Q  181 agggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  28218542 agggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgta 28218484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 180 - 239
Target Start/End: Complemental strand, 41600338 - 41600279
Alignment:
Q  180 aagggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    ||||||||||||||||||| |||| ||||||||||| |||||||||||||||||||||||    
T  41600338 aagggtaaatacctctttttgtccctgtaatattagcgaattccggttttagtccctgta 41600279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 181 - 239
Target Start/End: Original strand, 12006540 - 12006598
Alignment:
Q  181 agggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    ||||||||||||||||||||||| ||||||||||| |||||||| ||||||||||||||    
T  12006540 agggtaaatacctcttttcgtccctgtaatattagcgaattccgattttagtccctgta 12006598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 181 - 239
Target Start/End: Complemental strand, 20963872 - 20963814
Alignment:
Q  181 agggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    |||||||||||||||||| |||| ||||||||||| |||||||||||||||||||||||    
T  20963872 agggtaaatacctctttttgtccctgtaatattagcgaattccggttttagtccctgta 20963814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 181 - 239
Target Start/End: Complemental strand, 23705039 - 23704981
Alignment:
Q  181 agggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    ||||||||||||||||||||||  ||||||||||| |||||||||||||||||||||||    
T  23705039 agggtaaatacctcttttcgtctctgtaatattagcgaattccggttttagtccctgta 23704981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 181 - 239
Target Start/End: Original strand, 48672276 - 48672334
Alignment:
Q  181 agggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    ||||||||||||||||||||||| ||||||||||||||||| ||||||||||| |||||    
T  48672276 agggtaaatacctcttttcgtccctgtaatattagtgaatttcggttttagtctctgta 48672334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 182 - 239
Target Start/End: Original strand, 20419536 - 20419593
Alignment:
Q  182 gggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    |||||||||||||||||||||| | ||||||||| |||||||||||||||||||||||    
T  20419536 gggtaaatacctcttttcgtccctataatattagcgaattccggttttagtccctgta 20419593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 181 - 237
Target Start/End: Complemental strand, 23383879 - 23383823
Alignment:
Q  181 agggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctg 237  Q
    ||||||||||||||||||||||| |||||||||||||||||| | ||||||||||||    
T  23383879 agggtaaatacctcttttcgtccctgtaatattagtgaattctgattttagtccctg 23383823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 180 - 239
Target Start/End: Complemental strand, 10409753 - 10409694
Alignment:
Q  180 aagggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    |||||||||||||||||||| ||| ||||||||||| |||||||| ||||||||||||||    
T  10409753 aagggtaaatacctcttttcatccatgtaatattagcgaattccgattttagtccctgta 10409694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 181 - 239
Target Start/End: Complemental strand, 12006919 - 12006861
Alignment:
Q  181 agggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    ||||||||||||||||||||| | ||||||||||| |||||||| ||||||||||||||    
T  12006919 agggtaaatacctcttttcgttcatgtaatattagcgaattccgattttagtccctgta 12006861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 182 - 236
Target Start/End: Original strand, 23383499 - 23383553
Alignment:
Q  182 gggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccct 236  Q
    |||||||||| ||||||||||  ||||||||||||||||||||||||||||||||    
T  23383499 gggtaaatacttcttttcgtctctgtaatattagtgaattccggttttagtccct 23383553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 181 - 239
Target Start/End: Complemental strand, 25772710 - 25772652
Alignment:
Q  181 agggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    |||||||||| |||||||||||| | ||||||||||||||||| |||||||||||||||    
T  25772710 agggtaaatatctcttttcgtccctataatattagtgaattccagttttagtccctgta 25772652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 181 - 239
Target Start/End: Complemental strand, 48672658 - 48672600
Alignment:
Q  181 agggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    ||||||||||||||||||||||  ||||||||||| ||||| |||||||||||||||||    
T  48672658 agggtaaatacctcttttcgtctctgtaatattagcgaatttcggttttagtccctgta 48672600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 182 - 239
Target Start/End: Original strand, 6465855 - 6465912
Alignment:
Q  182 gggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    ||||||||| || ||||||||| ||||||||||| |||||||||||||||||||||||    
T  6465855 gggtaaatatcttttttcgtccatgtaatattagcgaattccggttttagtccctgta 6465912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 182 - 239
Target Start/End: Complemental strand, 20419915 - 20419858
Alignment:
Q  182 gggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    ||||||||||||||||| |||| ||||||||||  |||||||||||||||||||||||    
T  20419915 gggtaaatacctctttttgtccctgtaatattaacgaattccggttttagtccctgta 20419858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 182 - 239
Target Start/End: Original strand, 23704662 - 23704719
Alignment:
Q  182 gggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    |||||||||||||||||||||| ||||||||||| |||||||||||||| || |||||    
T  23704662 gggtaaatacctcttttcgtccctgtaatattagcgaattccggttttactcactgta 23704719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 183 - 239
Target Start/End: Original strand, 31851242 - 31851298
Alignment:
Q  183 ggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    ||||||||||||||||||||||| ||||||||||||||| || ||||||| ||||||    
T  31851242 ggtaaatacctcttttcgtccttttaatattagtgaatttcgattttagttcctgta 31851298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 180 - 239
Target Start/End: Original strand, 7657967 - 7658026
Alignment:
Q  180 aagggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    |||| ||||||||||||||||||| ||||||||||| ||||| |||||||| ||||||||    
T  7657967 aaggctaaatacctcttttcgtccatgtaatattagcgaatttcggttttaatccctgta 7658026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 181 - 228
Target Start/End: Complemental strand, 20459069 - 20459022
Alignment:
Q  181 agggtaaatacctcttttcgtccttgtaatattagtgaattccggttt 228  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||||    
T  20459069 agggtaaatacctcttttcgtccctgtaatattagggaattccggttt 20459022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 182 - 233
Target Start/End: Complemental strand, 38880099 - 38880048
Alignment:
Q  182 gggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtc 233  Q
    |||||||||||||||||||||| |||||||||||  ||||||||||||||||    
T  38880099 gggtaaatacctcttttcgtccctgtaatattagcaaattccggttttagtc 38880048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 181 - 239
Target Start/End: Original strand, 20458691 - 20458749
Alignment:
Q  181 agggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    ||||||||||| | ||||||||| ||||||||||  |||||||||||||||||||||||    
T  20458691 agggtaaatacattttttcgtccctgtaatattaacgaattccggttttagtccctgta 20458749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 186 - 239
Target Start/End: Complemental strand, 1250580 - 1250527
Alignment:
Q  186 aaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    ||||| |||||||||||||||||||||||| ||||||| ||||||||| |||||    
T  1250580 aaatatctcttttcgtccttgtaatattagcgaattccagttttagtctctgta 1250527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 182 - 239
Target Start/End: Original strand, 16995200 - 16995257
Alignment:
Q  182 gggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    |||||||||||||||||||||  ||||||||||| ||||| |||||||||| ||||||    
T  16995200 gggtaaatacctcttttcgtctctgtaatattagcgaatttcggttttagttcctgta 16995257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 182 - 239
Target Start/End: Original strand, 20963494 - 20963551
Alignment:
Q  182 gggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    ||||||||| || ||||||||| ||||||||||||||||||  |||||||||||||||    
T  20963494 gggtaaatatctattttcgtccctgtaatattagtgaattctagttttagtccctgta 20963551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 182 - 239
Target Start/End: Original strand, 38879723 - 38879780
Alignment:
Q  182 gggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    |||||||||||||||||||||| ||||||||||| |||||||  ||||||| ||||||    
T  38879723 gggtaaatacctcttttcgtccctgtaatattagcgaattccaattttagttcctgta 38879780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 183 - 239
Target Start/End: Complemental strand, 7658342 - 7658286
Alignment:
Q  183 ggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    ||||||||||||||||||||| ||||||||||  ||||| ||||||||||| |||||    
T  7658342 ggtaaatacctcttttcgtccctgtaatattaacgaatttcggttttagtctctgta 7658286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 182 - 234
Target Start/End: Complemental strand, 24195250 - 24195198
Alignment:
Q  182 gggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtcc 234  Q
    |||||||||||||||||||||| ||||||||||| |||||| | |||||||||    
T  24195250 gggtaaatacctcttttcgtccctgtaatattagcgaattctgattttagtcc 24195198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 180 - 232
Target Start/End: Original strand, 25772362 - 25772414
Alignment:
Q  180 aagggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagt 232  Q
    |||||||||||||||||||||||| ||||||||||| ||||| || |||||||    
T  25772362 aagggtaaatacctcttttcgtccctgtaatattagcgaatttcgattttagt 25772414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 182 - 234
Target Start/End: Original strand, 41599958 - 41600010
Alignment:
Q  182 gggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtcc 234  Q
    |||||||||||||||||| ||| ||||||||||| ||||| ||||||||||||    
T  41599958 gggtaaatacctcttttcatccctgtaatattagcgaatttcggttttagtcc 41600010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 180 - 234
Target Start/End: Complemental strand, 33162916 - 33162862
Alignment:
Q  180 aagggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtcc 234  Q
    |||||||||||||||||||||||  ||||||||||| ||||| | ||||||||||    
T  33162916 aagggtaaatacctcttttcgtctctgtaatattagcgaatttctgttttagtcc 33162862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 180 - 233
Target Start/End: Complemental strand, 31852210 - 31852157
Alignment:
Q  180 aagggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtc 233  Q
    |||||| ||||||||||||||||| ||||||||||  ||||| |||||||||||    
T  31852210 aagggttaatacctcttttcgtccctgtaatattaacgaatttcggttttagtc 31852157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 183 - 239
Target Start/End: Original strand, 44816832 - 44816890
Alignment:
Q  183 ggtaaatacctcttttc--gtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    |||||||||||||||||  |||| ||||||||||| ||||| ||||||||||| |||||    
T  44816832 ggtaaatacctcttttctcgtccctgtaatattagcgaatttcggttttagtctctgta 44816890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 239
Target Start/End: Original strand, 14630335 - 14630393
Alignment:
Q  181 agggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    ||||| ||||||  |||| || |||||||||| || |||||||||||||||||||||||    
T  14630335 agggttaataccctttttagttcttgtaatatgagcgaattccggttttagtccctgta 14630393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 239
Target Start/End: Complemental strand, 14647029 - 14646971
Alignment:
Q  181 agggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    ||||| ||||||  |||| |||| |||||||| || |||||||||||||||||||||||    
T  14647029 agggttaataccctttttagtccctgtaatatgagcgaattccggttttagtccctgta 14646971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 187 - 239
Target Start/End: Complemental strand, 23258297 - 23258245
Alignment:
Q  187 aatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    |||| ||||||| |||  ||||||||||| ||||||||||||| |||||||||    
T  23258297 aatatctcttttggtctctgtaatattagcgaattccggttttggtccctgta 23258245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 239
Target Start/End: Original strand, 48648263 - 48648319
Alignment:
Q  183 ggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    |||||||| |||||||||||| |||||||| || ||||| || ||||||||| ||||    
T  48648263 ggtaaatatctcttttcgtccctgtaatatcagcgaatttcgattttagtccatgta 48648319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 52; Significance: 6e-21; HSPs: 39)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 180 - 239
Target Start/End: Original strand, 18462284 - 18462343
Alignment:
Q  180 aagggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  18462284 aagggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgta 18462343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 181 - 239
Target Start/End: Complemental strand, 48072340 - 48072282
Alignment:
Q  181 agggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||    
T  48072340 agggtaaatacctcttttcgtcattgtaatattagtgaattccggttttagtccttgta 48072282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 180 - 239
Target Start/End: Original strand, 4906960 - 4907019
Alignment:
Q  180 aagggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    |||||||||||||||||||||||| ||||||||||||||||||  |||||||||||||||    
T  4906960 aagggtaaatacctcttttcgtccctgtaatattagtgaattctagttttagtccctgta 4907019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 180 - 239
Target Start/End: Complemental strand, 17606686 - 17606627
Alignment:
Q  180 aagggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    |||||| ||||||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  17606686 aagggttaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgta 17606627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 180 - 239
Target Start/End: Complemental strand, 39711452 - 39711393
Alignment:
Q  180 aagggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    |||||||||||||||||||||||| ||||||||||| |||||| ||||||||||||||||    
T  39711452 aagggtaaatacctcttttcgtccctgtaatattagcgaattctggttttagtccctgta 39711393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 182 - 239
Target Start/End: Original strand, 39711074 - 39711130
Alignment:
Q  182 gggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    ||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||    
T  39711074 gggtaaatacctcttttcgtc-ttgtaatattagcgaattccggttttagtccctgta 39711130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 182 - 239
Target Start/End: Complemental strand, 39826424 - 39826367
Alignment:
Q  182 gggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    |||||||||||||||||||||| ||||||||||| ||||| |||||||||||||||||    
T  39826424 gggtaaatacctcttttcgtccatgtaatattagcgaatttcggttttagtccctgta 39826367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 180 - 239
Target Start/End: Complemental strand, 33629070 - 33629011
Alignment:
Q  180 aagggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    |||||| |||||||||||| |||| ||||||||||| |||||||||||||||||||||||    
T  33629070 aagggttaatacctctttttgtccctgtaatattagcgaattccggttttagtccctgta 33629011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 185 - 239
Target Start/End: Original strand, 17606307 - 17606361
Alignment:
Q  185 taaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    ||||||||||||||||||| ||||||||||| |||||||| ||||||||||||||    
T  17606307 taaatacctcttttcgtccctgtaatattagcgaattccgattttagtccctgta 17606361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 181 - 239
Target Start/End: Original strand, 20995697 - 20995755
Alignment:
Q  181 agggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    ||||||||||||||||||| ||  ||||||||||| |||||||||||||||||||||||    
T  20995697 agggtaaatacctcttttcatctctgtaatattagcgaattccggttttagtccctgta 20995755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 181 - 239
Target Start/End: Original strand, 29696564 - 29696622
Alignment:
Q  181 agggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    ||||||||||||||||||||||| ||||||||||| ||||| ||||||||||| |||||    
T  29696564 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtctctgta 29696622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 181 - 235
Target Start/End: Original strand, 33628689 - 33628743
Alignment:
Q  181 agggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccc 235  Q
    ||||||||||||||||||||||| ||||||||||| |||||| ||||||||||||    
T  33628689 agggtaaatacctcttttcgtccctgtaatattagcgaattctggttttagtccc 33628743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 182 - 232
Target Start/End: Original strand, 52058011 - 52058061
Alignment:
Q  182 gggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagt 232  Q
    |||||||||||||||||||||||||||||||||  ||||||||||||||||    
T  52058011 gggtaaatacctcttttcgtccttgtaatattaacgaattccggttttagt 52058061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 182 - 239
Target Start/End: Complemental strand, 18342395 - 18342338
Alignment:
Q  182 gggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    |||||||||||| ||||||||| ||||||||||| ||||| |||||||||||||||||    
T  18342395 gggtaaataccttttttcgtccctgtaatattagcgaatttcggttttagtccctgta 18342338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 182 - 239
Target Start/End: Complemental strand, 39971024 - 39970967
Alignment:
Q  182 gggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    |||||||||||||||||||||| ||||||||||  ||||| |||||||||||||||||    
T  39971024 gggtaaatacctcttttcgtccatgtaatattaacgaatttcggttttagtccctgta 39970967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 180 - 239
Target Start/End: Original strand, 24467627 - 24467686
Alignment:
Q  180 aagggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    |||||||||||| ||||||||||| ||||||||||| |||||||  ||||||||||||||    
T  24467627 aagggtaaatacatcttttcgtccctgtaatattagcgaattccaattttagtccctgta 24467686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 182 - 239
Target Start/End: Complemental strand, 24468002 - 24467948
Alignment:
Q  182 gggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    ||||||||||||||||||   | |||||||||||||||||||||||||||||||||||    
T  24468002 gggtaaatacctcttttc---catgtaatattagtgaattccggttttagtccctgta 24467948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 180 - 239
Target Start/End: Complemental strand, 29696937 - 29696878
Alignment:
Q  180 aagggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    ||||||||||||||||||||||   ||||||||||| ||||||||||||||||| |||||    
T  29696937 aagggtaaatacctcttttcgtttatgtaatattagcgaattccggttttagtcactgta 29696878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 180 - 239
Target Start/End: Original strand, 39826048 - 39826107
Alignment:
Q  180 aagggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    |||||||||||||||||||||||| | ||||||||| ||||| || ||||||||||||||    
T  39826048 aagggtaaatacctcttttcgtccatataatattagcgaatttcgattttagtccctgta 39826107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 180 - 239
Target Start/End: Complemental strand, 52058388 - 52058329
Alignment:
Q  180 aagggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    |||||||||||||||||||||||| ||||||||||| |||||  ||||||||| ||||||    
T  52058388 aagggtaaatacctcttttcgtccctgtaatattagcgaattttggttttagttcctgta 52058329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 182 - 239
Target Start/End: Original strand, 8292804 - 8292861
Alignment:
Q  182 gggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    ||||||||| |||||||||||| |||| |||||| |||| ||||||||||||||||||    
T  8292804 gggtaaataactcttttcgtccctgtactattagcgaatcccggttttagtccctgta 8292861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 180 - 239
Target Start/End: Complemental strand, 8293188 - 8293129
Alignment:
Q  180 aagggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    |||||||||||||||||||||||| | ||||||||  ||||||  |||||||||||||||    
T  8293188 aagggtaaatacctcttttcgtccctataatattaacgaattctagttttagtccctgta 8293129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 180 - 239
Target Start/End: Complemental strand, 43539727 - 43539668
Alignment:
Q  180 aagggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    |||||| |||| |||||||||||| |||||||||||  ||||||||||||||| ||||||    
T  43539727 aagggttaatagctcttttcgtccctgtaatattagcaaattccggttttagttcctgta 43539668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 194 - 236
Target Start/End: Complemental strand, 17502095 - 17502053
Alignment:
Q  194 cttttcgtccttgtaatattagtgaattccggttttagtccct 236  Q
    ||||| |||||||||||||||| ||||||||||||||||||||    
T  17502095 cttttggtccttgtaatattagcgaattccggttttagtccct 17502053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 181 - 239
Target Start/End: Original strand, 27039637 - 27039695
Alignment:
Q  181 agggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    ||||| ||||||||||||||||| |||||||| || ||||||||||||| |||| ||||    
T  27039637 agggttaatacctcttttcgtccctgtaatatgagcgaattccggttttggtccttgta 27039695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 180 - 234
Target Start/End: Original strand, 30299230 - 30299284
Alignment:
Q  180 aagggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtcc 234  Q
    |||||||||||||||||||||||| ||||||||||| ||| | || |||||||||    
T  30299230 aagggtaaatacctcttttcgtccctgtaatattagcgaacttcgattttagtcc 30299284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 182 - 239
Target Start/End: Complemental strand, 4907340 - 4907283
Alignment:
Q  182 gggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    ||||||||| || ||||| ||| ||||||||||| ||||||| |||||||||||||||    
T  4907340 gggtaaatatctattttcctccctgtaatattagcgaattccagttttagtccctgta 4907283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 180 - 232
Target Start/End: Complemental strand, 18462664 - 18462612
Alignment:
Q  180 aagggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagt 232  Q
    ||||| |||||||||||||| ||| |||||||||||  |||||||||||||||    
T  18462664 aagggcaaatacctcttttcctccctgtaatattagcaaattccggttttagt 18462612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 180 - 236
Target Start/End: Original strand, 34749136 - 34749192
Alignment:
Q  180 aagggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccct 236  Q
    |||||||||||| ||||||| ||| ||||||||||| |||||| | |||||||||||    
T  34749136 aagggtaaatacatcttttcatccctgtaatattagcgaattctgattttagtccct 34749192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 187 - 239
Target Start/End: Complemental strand, 42510388 - 42510336
Alignment:
Q  187 aatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    |||||| ||||| |||| ||||||||||| |||||||||||||||||| ||||    
T  42510388 aataccacttttggtccctgtaatattagcgaattccggttttagtccttgta 42510336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 182 - 233
Target Start/End: Complemental strand, 13230110 - 13230059
Alignment:
Q  182 gggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtc 233  Q
    |||||||||||||||||||||  || |||||||| ||||| |||||||||||    
T  13230110 gggtaaatacctcttttcgtctctgaaatattagcgaatttcggttttagtc 13230059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 239
Target Start/End: Original strand, 17500768 - 17500826
Alignment:
Q  181 agggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    ||||| ||||||  |||| |||| ||||||||||| ||||||||||||||||| |||||    
T  17500768 agggttaataccatttttggtccctgtaatattagcgaattccggttttagtctctgta 17500826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 239
Target Start/End: Original strand, 43400752 - 43400810
Alignment:
Q  181 agggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    ||||| ||||||||||||||||  | |||||| || ||||||||||||| |||||||||    
T  43400752 agggttaatacctcttttcgtctctataatatgagcgaattccggttttggtccctgta 43400810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 181 - 239
Target Start/End: Complemental strand, 30252279 - 30252219
Alignment:
Q  181 agggtaaatacctcttttc--gtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    ||||||||||||||||| |  |||| | ||||||||| |||||| ||||||||||||||||    
T  30252279 agggtaaatacctctttccttgtccctataatattagcgaattctggttttagtccctgta 30252219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 239
Target Start/End: Complemental strand, 30299609 - 30299552
Alignment:
Q  182 gggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    |||||||||||| ||||||||  |||||||||||  |||| |||||||||| ||||||    
T  30299609 gggtaaatacctattttcgtctctgtaatattagcaaatttcggttttagttcctgta 30299552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 239
Target Start/End: Complemental strand, 34749483 - 34749426
Alignment:
Q  182 gggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    ||||||||||||||||| |||  ||||||||||  |||||||| ||||||||| ||||    
T  34749483 gggtaaatacctctttttgtctctgtaatattatcgaattccgattttagtccttgta 34749426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 187 - 236
Target Start/End: Original strand, 37236723 - 37236772
Alignment:
Q  187 aatacctcttttcgtccttgtaatattagtgaattccggttttagtccct 236  Q
    |||| ||||||| |||| |||||||| || ||||||||||||||||||||    
T  37236723 aatatctcttttggtccctgtaatatgagcgaattccggttttagtccct 37236772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 239
Target Start/End: Original strand, 48071961 - 48072018
Alignment:
Q  182 gggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    |||| |||| |||||||||| | ||||||||||| |||||| ||||||||| ||||||    
T  48071961 gggttaatatctcttttcgttcatgtaatattagcgaattctggttttagttcctgta 48072018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 214
Target Start/End: Original strand, 39970645 - 39970677
Alignment:
Q  182 gggtaaatacctcttttcgtccttgtaatatta 214  Q
    |||||||||||||||||||||| ||||||||||    
T  39970645 gggtaaatacctcttttcgtccatgtaatatta 39970677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 51; Significance: 2e-20; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 181 - 239
Target Start/End: Original strand, 24731934 - 24731992
Alignment:
Q  181 agggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  24731934 agggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgta 24731992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 182 - 239
Target Start/End: Original strand, 9481182 - 9481239
Alignment:
Q  182 gggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    |||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  9481182 gggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgta 9481239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 180 - 239
Target Start/End: Complemental strand, 32017883 - 32017824
Alignment:
Q  180 aagggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    ||||||||||| |||||||||||| ||||||||||| |||||||||||||||||||||||    
T  32017883 aagggtaaatatctcttttcgtccctgtaatattagcgaattccggttttagtccctgta 32017824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 183 - 239
Target Start/End: Original strand, 34884558 - 34884614
Alignment:
Q  183 ggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    |||||||| |||||||||||||||||||||||||||||| |||||||| ||||||||    
T  34884558 ggtaaatatctcttttcgtccttgtaatattagtgaatttcggttttaatccctgta 34884614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 180 - 239
Target Start/End: Original strand, 18500313 - 18500372
Alignment:
Q  180 aagggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    |||||||||||||||||||||||| | ||||||||| ||||| |||||||||||||||||    
T  18500313 aagggtaaatacctcttttcgtccctataatattagcgaatttcggttttagtccctgta 18500372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 185 - 239
Target Start/End: Complemental strand, 26385649 - 26385595
Alignment:
Q  185 taaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    ||||||||||||||||||| ||||||||||| |||||||| ||||||||||||||    
T  26385649 taaatacctcttttcgtccctgtaatattagcgaattccgattttagtccctgta 26385595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 180 - 234
Target Start/End: Original strand, 30617965 - 30618019
Alignment:
Q  180 aagggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtcc 234  Q
    |||||||||||||||||||||||| |||||||||||||||||| | |||||||||    
T  30617965 aagggtaaatacctcttttcgtccctgtaatattagtgaattctgattttagtcc 30618019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 181 - 234
Target Start/End: Complemental strand, 18500708 - 18500655
Alignment:
Q  181 agggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtcc 234  Q
    ||||||||||||||||||||||| ||||||||||| ||||| ||||||||||||    
T  18500708 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtcc 18500655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 186 - 237
Target Start/End: Original strand, 10321737 - 10321788
Alignment:
Q  186 aaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctg 237  Q
    |||||| ||||||||||| ||||||||||| |||||||||||||||||||||    
T  10321737 aaatacttcttttcgtccctgtaatattagcgaattccggttttagtccctg 10321788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 181 - 238
Target Start/End: Complemental strand, 2299692 - 2299635
Alignment:
Q  181 agggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgt 238  Q
    |||||||||| |||||||||| | ||||||||||| |||||||||||||||| |||||    
T  2299692 agggtaaatatctcttttcgttcctgtaatattagcgaattccggttttagttcctgt 2299635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 182 - 239
Target Start/End: Original strand, 26385278 - 26385335
Alignment:
Q  182 gggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    |||||||||||||||||||||  ||||||||||| |||||| ||||||||||| ||||    
T  26385278 gggtaaatacctcttttcgtctctgtaatattagcgaattctggttttagtccatgta 26385335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 180 - 232
Target Start/End: Original strand, 30458898 - 30458950
Alignment:
Q  180 aagggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagt 232  Q
    |||| ||||||| ||||||||||| ||||||||||||||||| ||||||||||    
T  30458898 aaggataaatacatcttttcgtccctgtaatattagtgaatttcggttttagt 30458950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 180 - 239
Target Start/End: Original strand, 2299338 - 2299397
Alignment:
Q  180 aagggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    |||||||||||  | ||||||||  ||||||||||| |||||||||||||||||||||||    
T  2299338 aagggtaaatattttttttcgtctatgtaatattagcgaattccggttttagtccctgta 2299397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 183 - 234
Target Start/End: Original strand, 19284130 - 19284181
Alignment:
Q  183 ggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtcc 234  Q
    ||||||||||||||||||| | ||||||||||| ||||||| ||||||||||    
T  19284130 ggtaaatacctcttttcgttcatgtaatattagcgaattccagttttagtcc 19284181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 180 - 223
Target Start/End: Complemental strand, 24732317 - 24732274
Alignment:
Q  180 aagggtaaatacctcttttcgtccttgtaatattagtgaattcc 223  Q
    |||||||||||||||||||||||| ||||||||||| |||||||    
T  24732317 aagggtaaatacctcttttcgtccctgtaatattagcgaattcc 24732274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 181 - 233
Target Start/End: Complemental strand, 33637896 - 33637844
Alignment:
Q  181 agggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtc 233  Q
    ||||||||||||||||||| || |||||||||||  ||||| |||||||||||    
T  33637896 agggtaaatacctcttttcatctttgtaatattaccgaatttcggttttagtc 33637844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 187 - 239
Target Start/End: Original strand, 9154884 - 9154937
Alignment:
Q  187 aatacctcttttcgtccttgtaatatt-agtgaattccggttttagtccctgta 239  Q
    ||||||||||||| ||| ||||||||| || |||||||| ||||||||||||||    
T  9154884 aatacctcttttcctccctgtaatatttagcgaattccgattttagtccctgta 9154937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 239
Target Start/End: Original strand, 21069514 - 21069571
Alignment:
Q  182 gggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    |||| ||||||  |||| |||| |||||||| || |||||||||||||||||||||||    
T  21069514 gggttaatacccattttagtccctgtaatatgagcgaattccggttttagtccctgta 21069571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 193 - 230
Target Start/End: Original strand, 33714494 - 33714531
Alignment:
Q  193 tcttttcgtccttgtaatattagtgaattccggtttta 230  Q
    ||||||||||| ||||||||||| ||||||||||||||    
T  33714494 tcttttcgtccctgtaatattagcgaattccggtttta 33714531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0449 (Bit Score: 48; Significance: 1e-18; HSPs: 2)
Name: scaffold0449
Description:

Target: scaffold0449; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 180 - 239
Target Start/End: Complemental strand, 7580 - 7521
Alignment:
Q  180 aagggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    |||||||||||||| ||||||||| ||||||||||| |||||||||||||||||||||||    
T  7580 aagggtaaatacctattttcgtccctgtaatattagcgaattccggttttagtccctgta 7521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0449; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 183 - 239
Target Start/End: Original strand, 7227 - 7283
Alignment:
Q  183 ggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    ||||||||||||||||||||||||||||||||| |||||| ||| ||||| ||||||    
T  7227 ggtaaatacctcttttcgtccttgtaatattagcgaattctggtgttagttcctgta 7283  T

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Target: scaffold0185 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0185
Description:

Target: scaffold0185; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 181 - 239
Target Start/End: Original strand, 3868 - 3926
Alignment:
Q  181 agggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    |||||||||| |||||||||||| ||||||||||| |||||||||||||||||||||||    
T  3868 agggtaaatatctcttttcgtccctgtaatattagcgaattccggttttagtccctgta 3926  T

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Target: scaffold0176 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 181 - 239
Target Start/End: Complemental strand, 16007 - 15949
Alignment:
Q  181 agggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    |||||||||| |||||||||||| ||||||||||| ||||||||||||||||| |||||    
T  16007 agggtaaatatctcttttcgtccatgtaatattagcgaattccggttttagtctctgta 15949  T

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Target: scaffold0141 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 181 - 235
Target Start/End: Original strand, 8324 - 8378
Alignment:
Q  181 agggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccc 235  Q
    ||||||||||||||||||||||| ||||||||||| ||||| |||||||||||||    
T  8324 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccc 8378  T

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Target: scaffold0117 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 187 - 236
Target Start/End: Complemental strand, 12355 - 12306
Alignment:
Q  187 aatacctcttttcgtccttgtaatattagtgaattccggttttagtccct 236  Q
    ||||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  12355 aatacctcttttcgtccctgtaatattagcgaattccggttttagtccct 12306  T

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Target: scaffold0809 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 2)
Name: scaffold0809
Description:

Target: scaffold0809; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 181 - 236
Target Start/End: Complemental strand, 1785 - 1730
Alignment:
Q  181 agggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccct 236  Q
    ||||||||| ||||||||||||| ||||||||||  ||||||||||||||||||||    
T  1785 agggtaaatccctcttttcgtccctgtaatattaacgaattccggttttagtccct 1730  T

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Target: scaffold0809; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 180 - 239
Target Start/End: Original strand, 1409 - 1468
Alignment:
Q  180 aagggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    ||||||||||||||||||||| ||  |||||||| | ||||| || ||||||||||||||    
T  1409 aagggtaaatacctcttttcgacccggtaatatttgcgaatttcgattttagtccctgta 1468  T

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Target: scaffold0352 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 2)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 181 - 239
Target Start/End: Complemental strand, 6058 - 6000
Alignment:
Q  181 agggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    |||||||||||||||||| |||| || |||||||| |||||||| ||||||||||||||    
T  6058 agggtaaatacctcttttggtccctgcaatattagcgaattccgattttagtccctgta 6000  T

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Target: scaffold0352; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 181 - 236
Target Start/End: Original strand, 4666 - 4721
Alignment:
Q  181 agggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccct 236  Q
    |||||||||||||||||| |||| || |||||||| ||||||| ||||||||||||    
T  4666 agggtaaatacctcttttagtccctgcaatattagcgaattccagttttagtccct 4721  T

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Target: scaffold0477 (Bit Score: 35; Significance: 0.00000000008; HSPs: 2)
Name: scaffold0477
Description:

Target: scaffold0477; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 181 - 239
Target Start/End: Original strand, 4879 - 4937
Alignment:
Q  181 agggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgta 239  Q
    |||||||||||||||||| || | ||||||||||| ||||| |||||||||||| ||||    
T  4879 agggtaaatacctctttttgttcctgtaatattagcgaatttcggttttagtccatgta 4937  T

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Target: scaffold0477; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 180 - 234
Target Start/End: Complemental strand, 5126 - 5073
Alignment:
Q  180 aagggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtcc 234  Q
    ||||||||||||| |||||||||| ||||||||||| ||||||||||||| ||||    
T  5126 aagggtaaatacc-cttttcgtccatgtaatattagcgaattccggtttttgtcc 5073  T

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