View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12661_low_28 (Length: 321)

Name: NF12661_low_28
Description: NF12661
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12661_low_28
NF12661_low_28
[»] chr4 (38 HSPs)
chr4 (27-289)||(25513653-25513915)
chr4 (79-321)||(26446061-26446303)
chr4 (79-321)||(2424343-2424585)
chr4 (79-278)||(14630991-14631188)
chr4 (184-278)||(16296897-16296991)
chr4 (169-290)||(9638954-9639075)
chr4 (175-271)||(35660906-35661002)
chr4 (167-321)||(26921465-26921619)
chr4 (172-290)||(33186850-33186968)
chr4 (167-278)||(15239815-15239927)
chr4 (172-290)||(12424277-12424397)
chr4 (171-278)||(9622434-9622542)
chr4 (172-321)||(46741147-46741295)
chr4 (171-278)||(55583141-55583249)
chr4 (17-86)||(26445871-26445940)
chr4 (17-86)||(2424706-2424775)
chr4 (167-235)||(45314124-45314193)
chr4 (172-316)||(12623264-12623407)
chr4 (217-282)||(13847193-13847258)
chr4 (17-86)||(15747904-15747973)
chr4 (30-86)||(16025937-16025993)
chr4 (171-237)||(14477578-14477644)
chr4 (30-86)||(14630814-14630870)
chr4 (81-168)||(19622093-19622179)
chr4 (214-284)||(10273372-10273442)
chr4 (201-263)||(17142998-17143060)
chr4 (172-321)||(19565874-19566022)
chr4 (201-257)||(15747793-15747849)
chr4 (17-86)||(17142876-17142942)
chr4 (175-237)||(18462974-18463036)
chr4 (91-162)||(19080175-19080245)
chr4 (32-64)||(10237422-10237454)
chr4 (172-203)||(16296819-16296850)
chr4 (171-229)||(20150771-20150830)
chr4 (225-290)||(19610324-19610389)
chr4 (225-290)||(25091653-25091718)
chr4 (225-278)||(37019670-37019723)
chr4 (225-289)||(53630462-53630526)
[»] scaffold0056 (1 HSPs)
scaffold0056 (79-321)||(18129-18371)
[»] chr7 (55 HSPs)
chr7 (79-321)||(43745510-43745752)
chr7 (79-321)||(48212683-48212927)
chr7 (87-278)||(15575648-15575839)
chr7 (87-321)||(4690619-4690851)
chr7 (79-278)||(47095306-47095505)
chr7 (79-278)||(18874664-18874859)
chr7 (82-278)||(20252181-20252381)
chr7 (120-240)||(16186808-16186928)
chr7 (175-290)||(19195562-19195676)
chr7 (169-278)||(708428-708537)
chr7 (171-290)||(58400-58517)
chr7 (202-282)||(8513748-8513828)
chr7 (171-288)||(15700724-15700840)
chr7 (215-288)||(38299738-38299811)
chr7 (202-282)||(8488089-8488169)
chr7 (171-288)||(8930754-8930872)
chr7 (172-290)||(43276731-43276848)
chr7 (171-288)||(25943213-25943330)
chr7 (17-86)||(4690980-4691049)
chr7 (171-288)||(13744499-13744614)
chr7 (17-86)||(43745320-43745389)
chr7 (17-86)||(831981-832050)
chr7 (17-86)||(1197161-1197230)
chr7 (17-86)||(34958196-34958265)
chr7 (27-86)||(47095126-47095185)
chr7 (171-278)||(33556104-33556211)
chr7 (171-277)||(15720724-15720831)
chr7 (17-86)||(48213032-48213101)
chr7 (171-278)||(36300640-36300745)
chr7 (214-285)||(13315074-13315145)
chr7 (171-278)||(18570592-18570700)
chr7 (220-290)||(19283051-19283121)
chr7 (214-278)||(16250221-16250285)
chr7 (224-278)||(3287743-3287797)
chr7 (32-86)||(18079617-18079671)
chr7 (175-237)||(42565872-42565934)
chr7 (94-177)||(16368271-16368354)
chr7 (201-260)||(34958321-34958380)
chr7 (201-256)||(831871-831926)
chr7 (201-256)||(1197051-1197106)
chr7 (225-290)||(12127150-12127215)
chr7 (169-229)||(16496154-16496215)
chr7 (225-321)||(24269902-24269999)
chr7 (225-290)||(44374843-44374908)
chr7 (225-290)||(44383708-44383773)
chr7 (172-235)||(9743120-9743183)
chr7 (209-273)||(15700887-15700951)
chr7 (172-229)||(15119354-15119411)
chr7 (225-290)||(8851146-8851211)
chr7 (225-290)||(11067468-11067533)
chr7 (225-290)||(12372274-12372339)
chr7 (225-290)||(12465247-12465312)
chr7 (225-290)||(32433576-32433641)
chr7 (172-235)||(14160897-14160960)
chr7 (172-235)||(14318020-14318083)
[»] chr8 (45 HSPs)
chr8 (79-321)||(21514545-21514787)
chr8 (79-277)||(18816295-18816493)
chr8 (79-321)||(4380573-4380807)
chr8 (175-321)||(36732368-36732514)
chr8 (172-290)||(22208216-22208334)
chr8 (172-278)||(12577826-12577932)
chr8 (171-278)||(21399662-21399770)
chr8 (164-278)||(21676592-21676704)
chr8 (171-278)||(21794155-21794263)
chr8 (181-290)||(22258293-22258403)
chr8 (171-290)||(18834371-18834487)
chr8 (17-86)||(38185044-38185113)
chr8 (175-278)||(21678845-21678946)
chr8 (247-321)||(5761555-5761629)
chr8 (172-321)||(17978372-17978520)
chr8 (17-86)||(18023653-18023722)
chr8 (17-86)||(20494632-20494701)
chr8 (214-273)||(22483775-22483834)
chr8 (214-288)||(22345153-22345227)
chr8 (214-288)||(22356813-22356887)
chr8 (29-86)||(21514367-21514424)
chr8 (190-278)||(21676499-21676585)
chr8 (171-278)||(22610266-22610371)
chr8 (171-287)||(23884116-23884231)
chr8 (201-260)||(18023573-18023632)
chr8 (172-321)||(22474704-22474852)
chr8 (215-290)||(36305988-36306062)
chr8 (205-260)||(38184929-38184984)
chr8 (199-257)||(22483912-22483970)
chr8 (32-86)||(22366072-22366123)
chr8 (172-290)||(21579193-21579310)
chr8 (265-321)||(22317867-22317923)
chr8 (225-321)||(22532088-22532184)
chr8 (225-321)||(22536773-22536869)
chr8 (181-235)||(12037205-12037260)
chr8 (171-229)||(22966756-22966815)
chr8 (181-235)||(29762909-29762964)
chr8 (224-290)||(20022027-20022093)
chr8 (32-86)||(22723251-22723305)
chr8 (225-283)||(39694271-39694329)
chr8 (225-321)||(20397465-20397562)
chr8 (171-227)||(21697509-21697566)
chr8 (225-282)||(23889799-23889856)
chr8 (32-64)||(24907883-24907915)
chr8 (172-235)||(41680174-41680237)
[»] chr5 (24 HSPs)
chr5 (79-321)||(660644-660884)
chr5 (79-290)||(23199194-23199405)
chr5 (116-278)||(18744765-18744927)
chr5 (79-273)||(1627071-1627266)
chr5 (175-278)||(16063701-16063804)
chr5 (175-278)||(6551289-6551392)
chr5 (171-290)||(21398631-21398752)
chr5 (171-290)||(32607303-32607423)
chr5 (171-321)||(26749978-26750127)
chr5 (202-314)||(1626881-1626992)
chr5 (17-86)||(1627387-1627456)
chr5 (30-86)||(18744558-18744614)
chr5 (172-321)||(8833162-8833310)
chr5 (202-314)||(14025770-14025881)
chr5 (166-232)||(21504081-21504147)
chr5 (176-278)||(20313226-20313328)
chr5 (27-66)||(660467-660506)
chr5 (171-229)||(24068175-24068234)
chr5 (173-239)||(21398833-21398904)
chr5 (225-321)||(21299993-21300096)
chr5 (225-286)||(31622117-31622178)
chr5 (171-203)||(22111923-22111955)
chr5 (172-235)||(26762350-26762413)
chr5 (169-229)||(36315305-36315366)
[»] chr1 (39 HSPs)
chr1 (79-321)||(24719467-24719708)
chr1 (81-287)||(28476724-28476930)
chr1 (117-288)||(12710759-12710930)
chr1 (169-278)||(38056671-38056780)
chr1 (194-278)||(50544841-50544925)
chr1 (172-290)||(24007212-24007330)
chr1 (169-279)||(8275987-8276097)
chr1 (172-290)||(8306552-8306671)
chr1 (191-277)||(22145666-22145752)
chr1 (171-278)||(34392713-34392821)
chr1 (202-321)||(14792519-14792637)
chr1 (214-288)||(17901783-17901857)
chr1 (181-316)||(18121559-18121694)
chr1 (27-86)||(28477053-28477112)
chr1 (171-290)||(20588581-20588703)
chr1 (171-290)||(20593119-20593241)
chr1 (172-237)||(39061268-39061333)
chr1 (171-288)||(45499487-45499605)
chr1 (199-288)||(6834150-6834239)
chr1 (202-321)||(44892427-44892545)
chr1 (217-278)||(635003-635064)
chr1 (172-315)||(38887049-38887191)
chr1 (214-288)||(35895088-35895162)
chr1 (225-316)||(24723312-24723403)
chr1 (225-317)||(51324504-51324596)
chr1 (172-287)||(20708049-20708163)
chr1 (171-229)||(40390096-40390155)
chr1 (175-237)||(21188073-21188135)
chr1 (169-229)||(14294858-14294919)
chr1 (120-176)||(41931146-41931202)
chr1 (169-229)||(51131317-51131378)
chr1 (214-277)||(16401902-16401963)
chr1 (52-86)||(20822729-20822763)
chr1 (225-290)||(16058301-16058366)
chr1 (225-290)||(19676711-19676776)
chr1 (225-290)||(21046036-21046101)
chr1 (229-321)||(21168937-21169030)
chr1 (202-235)||(21243799-21243832)
chr1 (32-60)||(20822698-20822726)
[»] scaffold0878 (2 HSPs)
scaffold0878 (79-288)||(3411-3620)
scaffold0878 (17-86)||(3741-3810)
[»] chr2 (20 HSPs)
chr2 (79-278)||(21315475-21315674)
chr2 (79-278)||(21335265-21335464)
chr2 (79-316)||(23610474-23610717)
chr2 (79-290)||(21369147-21369358)
chr2 (172-321)||(149450-149610)
chr2 (225-321)||(19201156-19201252)
chr2 (167-235)||(28652593-28652662)
chr2 (171-278)||(28344987-28345092)
chr2 (214-288)||(23801485-23801559)
chr2 (172-237)||(25584302-25584367)
chr2 (171-278)||(34491239-34491350)
chr2 (171-237)||(19647180-19647246)
chr2 (175-278)||(20005970-20006072)
chr2 (175-237)||(45535876-45535938)
chr2 (225-290)||(17307486-17307551)
chr2 (171-203)||(25584186-25584218)
chr2 (176-278)||(36734450-36734552)
chr2 (265-316)||(18388151-18388202)
chr2 (225-290)||(24780827-24780892)
chr2 (32-61)||(29114431-29114460)
[»] chr6 (29 HSPs)
chr6 (79-292)||(20410497-20410708)
chr6 (17-180)||(21686158-21686321)
chr6 (180-321)||(21683031-21683171)
chr6 (142-279)||(15998806-15998943)
chr6 (187-290)||(19825473-19825576)
chr6 (169-321)||(18982515-18982669)
chr6 (171-288)||(10446162-10446280)
chr6 (181-278)||(23658044-23658142)
chr6 (172-321)||(7217200-7217347)
chr6 (177-288)||(34140445-34140554)
chr6 (177-288)||(34153061-34153170)
chr6 (214-288)||(29045260-29045334)
chr6 (181-321)||(22557204-22557343)
chr6 (171-278)||(1818899-1819005)
chr6 (202-321)||(18455029-18455147)
chr6 (175-237)||(24506155-24506217)
chr6 (167-235)||(25601371-25601437)
chr6 (172-232)||(18982362-18982422)
chr6 (225-317)||(28948575-28948667)
chr6 (172-235)||(31734655-31734718)
chr6 (225-319)||(19235123-19235218)
chr6 (172-321)||(23431396-23431551)
chr6 (227-320)||(19167809-19167903)
chr6 (225-290)||(7827972-7828037)
chr6 (201-286)||(13285724-13285809)
chr6 (225-290)||(19655218-19655283)
chr6 (225-290)||(23150274-23150339)
chr6 (225-278)||(27329980-27330033)
chr6 (225-278)||(27390720-27390773)
[»] scaffold0516 (2 HSPs)
scaffold0516 (94-315)||(5267-5488)
scaffold0516 (265-315)||(5170-5220)
[»] chr3 (50 HSPs)
chr3 (79-278)||(14520300-14520499)
chr3 (79-278)||(17208378-17208577)
chr3 (79-315)||(24547054-24547290)
chr3 (79-320)||(24548911-24549149)
chr3 (169-290)||(14641535-14641656)
chr3 (169-288)||(29907582-29907702)
chr3 (169-288)||(29948748-29948868)
chr3 (169-288)||(29997902-29998022)
chr3 (172-282)||(14152394-14152504)
chr3 (171-290)||(6159350-6159470)
chr3 (171-278)||(22841278-22841390)
chr3 (171-277)||(54875474-54875581)
chr3 (171-278)||(3527156-3527261)
chr3 (171-278)||(2841505-2841613)
chr3 (171-278)||(6156656-6156763)
chr3 (17-86)||(2247998-2248067)
chr3 (171-277)||(17684835-17684942)
chr3 (167-290)||(50350803-50350928)
chr3 (172-277)||(5215594-5215699)
chr3 (171-278)||(14442120-14442228)
chr3 (171-277)||(17669698-17669805)
chr3 (29-86)||(24546876-24546933)
chr3 (202-321)||(15566721-15566847)
chr3 (199-270)||(45803338-45803409)
chr3 (201-260)||(2247883-2247942)
chr3 (166-237)||(21845691-21845762)
chr3 (31-86)||(24549270-24549325)
chr3 (172-257)||(50755274-50755360)
chr3 (175-278)||(3160626-3160728)
chr3 (199-278)||(12917305-12917384)
chr3 (171-237)||(48631278-48631344)
chr3 (175-216)||(13520408-13520449)
chr3 (172-287)||(6003133-6003247)
chr3 (32-74)||(25104106-25104148)
chr3 (166-278)||(25202075-25202187)
chr3 (172-235)||(53646100-53646163)
chr3 (172-235)||(54330348-54330411)
chr3 (224-301)||(11563724-11563801)
chr3 (171-212)||(12155089-12155130)
chr3 (225-290)||(17044966-17045031)
chr3 (225-290)||(17047126-17047191)
chr3 (225-290)||(17518860-17518925)
chr3 (225-290)||(17533722-17533787)
chr3 (225-290)||(22306570-22306635)
chr3 (225-290)||(49900730-49900795)
chr3 (171-231)||(12150993-12151053)
chr3 (171-203)||(13522353-13522385)
chr3 (214-282)||(16050916-16050984)
chr3 (225-289)||(17541434-17541498)
chr3 (214-278)||(48043477-48043539)
[»] scaffold0369 (2 HSPs)
scaffold0369 (79-288)||(15605-15813)
scaffold0369 (17-86)||(15934-16003)
[»] scaffold1186 (2 HSPs)
scaffold1186 (79-278)||(1876-2073)
scaffold1186 (30-86)||(1699-1755)
[»] scaffold0005 (2 HSPs)
scaffold0005 (79-278)||(186195-186392)
scaffold0005 (30-86)||(186513-186569)
[»] scaffold0231 (1 HSPs)
scaffold0231 (79-278)||(17520-17719)
[»] scaffold0203 (1 HSPs)
scaffold0203 (80-290)||(17927-18137)
[»] scaffold0853 (1 HSPs)
scaffold0853 (79-286)||(2445-2652)
[»] scaffold0032 (1 HSPs)
scaffold0032 (80-290)||(61835-62048)
[»] scaffold0162 (1 HSPs)
scaffold0162 (79-227)||(23932-24080)
[»] scaffold0414 (1 HSPs)
scaffold0414 (79-290)||(11147-11359)
[»] scaffold0676 (2 HSPs)
scaffold0676 (175-289)||(2831-2945)
scaffold0676 (172-237)||(2762-2828)
[»] scaffold1256 (1 HSPs)
scaffold1256 (190-315)||(2162-2287)
[»] scaffold0017 (2 HSPs)
scaffold0017 (167-316)||(26669-26818)
scaffold0017 (175-237)||(23564-23626)
[»] scaffold0247 (1 HSPs)
scaffold0247 (171-277)||(1022-1128)
[»] scaffold0061 (2 HSPs)
scaffold0061 (175-288)||(14575-14689)
scaffold0061 (175-288)||(23633-23747)
[»] scaffold0007 (5 HSPs)
scaffold0007 (169-315)||(16380-16528)
scaffold0007 (169-321)||(18656-18811)
scaffold0007 (172-232)||(18902-18962)
scaffold0007 (172-232)||(16619-16679)
scaffold0007 (265-321)||(158778-158834)
[»] scaffold0505 (1 HSPs)
scaffold0505 (167-288)||(4878-4999)
[»] scaffold0220 (1 HSPs)
scaffold0220 (169-278)||(13893-14002)
[»] scaffold0328 (1 HSPs)
scaffold0328 (169-290)||(18627-18749)
[»] scaffold0261 (1 HSPs)
scaffold0261 (167-321)||(6376-6529)
[»] scaffold0213 (2 HSPs)
scaffold0213 (172-290)||(19154-19272)
scaffold0213 (179-224)||(19115-19160)
[»] scaffold0555 (1 HSPs)
scaffold0555 (171-301)||(8722-8853)
[»] scaffold0108 (1 HSPs)
scaffold0108 (202-318)||(6395-6511)
[»] scaffold0431 (1 HSPs)
scaffold0431 (172-290)||(5578-5698)
[»] scaffold0174 (3 HSPs)
scaffold0174 (171-290)||(19801-19921)
scaffold0174 (216-288)||(5445-5517)
scaffold0174 (199-290)||(11590-11681)
[»] scaffold0379 (1 HSPs)
scaffold0379 (171-289)||(10893-11011)
[»] scaffold0031 (1 HSPs)
scaffold0031 (171-288)||(127332-127450)
[»] scaffold0401 (1 HSPs)
scaffold0401 (202-321)||(8799-8917)
[»] scaffold0385 (1 HSPs)
scaffold0385 (172-320)||(293-440)
[»] scaffold0298 (2 HSPs)
scaffold0298 (17-86)||(236-305)
scaffold0298 (201-260)||(361-420)
[»] scaffold0039 (1 HSPs)
scaffold0039 (205-321)||(9884-9999)
[»] scaffold0594 (1 HSPs)
scaffold0594 (199-278)||(2221-2300)
[»] scaffold0125 (1 HSPs)
scaffold0125 (167-237)||(28493-28564)
[»] scaffold0439 (2 HSPs)
scaffold0439 (172-321)||(4369-4517)
scaffold0439 (171-203)||(12256-12288)
[»] scaffold0098 (1 HSPs)
scaffold0098 (171-278)||(40052-40160)
[»] scaffold0004 (5 HSPs)
scaffold0004 (247-321)||(328244-328318)
scaffold0004 (199-288)||(66061-66150)
scaffold0004 (174-286)||(75885-75998)
scaffold0004 (209-278)||(111344-111413)
scaffold0004 (171-286)||(73032-73148)
[»] scaffold0139 (2 HSPs)
scaffold0139 (194-278)||(23503-23587)
scaffold0139 (172-236)||(40204-40268)
[»] scaffold0058 (1 HSPs)
scaffold0058 (175-237)||(59695-59757)
[»] scaffold0180 (2 HSPs)
scaffold0180 (17-86)||(10447-10516)
scaffold0180 (201-260)||(10572-10630)
[»] scaffold0092 (1 HSPs)
scaffold0092 (175-278)||(38441-38543)
[»] scaffold0086 (3 HSPs)
scaffold0086 (199-278)||(35185-35264)
scaffold0086 (166-273)||(35490-35597)
scaffold0086 (199-273)||(35341-35413)
[»] scaffold0337 (1 HSPs)
scaffold0337 (175-278)||(3155-3257)
[»] scaffold0730 (1 HSPs)
scaffold0730 (214-288)||(6494-6568)
[»] scaffold0035 (1 HSPs)
scaffold0035 (166-278)||(43786-43898)
[»] scaffold0011 (1 HSPs)
scaffold0011 (172-321)||(33402-33550)
[»] scaffold0048 (2 HSPs)
scaffold0048 (265-321)||(57013-57069)
scaffold0048 (214-278)||(68725-68789)
[»] scaffold0394 (1 HSPs)
scaffold0394 (175-278)||(7513-7615)
[»] scaffold0059 (1 HSPs)
scaffold0059 (175-321)||(49680-49826)
[»] scaffold0217 (1 HSPs)
scaffold0217 (171-237)||(28660-28726)
[»] scaffold0021 (2 HSPs)
scaffold0021 (175-237)||(17057-17118)
scaffold0021 (175-237)||(26588-26649)
[»] scaffold1939 (1 HSPs)
scaffold1939 (171-232)||(74-135)
[»] scaffold0462 (2 HSPs)
scaffold0462 (172-221)||(1264-1313)
scaffold0462 (172-221)||(6770-6819)
[»] scaffold0205 (1 HSPs)
scaffold0205 (175-278)||(5615-5718)
[»] scaffold0111 (1 HSPs)
scaffold0111 (225-321)||(12482-12585)
[»] scaffold0148 (1 HSPs)
scaffold0148 (224-288)||(8843-8907)
[»] scaffold0184 (1 HSPs)
scaffold0184 (169-229)||(377-438)
[»] scaffold0183 (1 HSPs)
scaffold0183 (79-168)||(11227-11316)
[»] scaffold0001 (3 HSPs)
scaffold0001 (225-290)||(31994-32059)
scaffold0001 (225-290)||(37301-37366)
scaffold0001 (225-289)||(77687-77751)
[»] scaffold0020 (2 HSPs)
scaffold0020 (172-235)||(174169-174232)
scaffold0020 (225-277)||(143611-143663)
[»] scaffold1800 (1 HSPs)
scaffold1800 (175-278)||(558-660)
[»] scaffold0461 (1 HSPs)
scaffold0461 (172-203)||(12433-12464)
[»] scaffold0120 (1 HSPs)
scaffold0120 (171-229)||(29257-29316)
[»] scaffold0165 (1 HSPs)
scaffold0165 (175-233)||(31880-31938)
[»] scaffold0100 (1 HSPs)
scaffold0100 (224-321)||(26589-26687)
[»] scaffold1633 (1 HSPs)
scaffold1633 (225-290)||(1205-1270)
[»] scaffold0956 (1 HSPs)
scaffold0956 (225-290)||(2555-2620)
[»] scaffold0112 (2 HSPs)
scaffold0112 (225-278)||(2889-2942)
scaffold0112 (91-172)||(13406-13488)
[»] scaffold0047 (1 HSPs)
scaffold0047 (225-290)||(79049-79114)
[»] scaffold0036 (1 HSPs)
scaffold0036 (225-290)||(78172-78237)
[»] scaffold0019 (1 HSPs)
scaffold0019 (225-290)||(24118-24183)
[»] scaffold1283 (1 HSPs)
scaffold1283 (225-289)||(456-520)
[»] scaffold0630 (1 HSPs)
scaffold0630 (172-235)||(9011-9074)
[»] scaffold0371 (1 HSPs)
scaffold0371 (172-235)||(10487-10550)
[»] scaffold0145 (1 HSPs)
scaffold0145 (186-229)||(8085-8129)
[»] scaffold0063 (1 HSPs)
scaffold0063 (172-235)||(62666-62729)


Alignment Details
Target: chr4 (Bit Score: 223; Significance: 1e-123; HSPs: 38)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 27 - 289
Target Start/End: Original strand, 25513653 - 25513915
Alignment:
Q  27 acaaaaacaacaacaatcagaagtgaattcatcaacaacaacattatactttaccaatttaatccacaataatcactttatacaaatatgcacttatggg 126  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||    
T  25513653 acaaaaacaacatcaatcagaagtgaattcatcaacaacaacattatacttcaccaatttaatccacaataatcactttatacaaataggcacttatggg 25513752  T
Q  127 tagaagtagaaaaagagattatacaaaagattatgaatgaaatctaaccctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttt 226  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  25513753 tagaagtagaaaaatagattatacaaaagattatgaatgaaatctaaccctaatttctataacatcaaaactaacaacaactacaatgttaaaccctttt 25513852  T
Q  227 tcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatc 289  Q
    ||||||||||||||| |||||||||||||||||| || |||| ||||||||| ||||||||||    
T  25513853 tcagaattatacaactcattattagagaaagctagtcccaccattaccttagattagatgatc 25513915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 79 - 321
Target Start/End: Original strand, 26446061 - 26446303
Alignment:
Q  79 accaatttaatccacaataatcactttatacaaatatgcacttatgggtagaagtagaaaaagagattatacaaaagattatgaatgaaatctaacccta 178  Q
    ||||||| |||||||| ||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  26446061 accaattaaatccacagtaatcactttatacaaataggcacttatgggtagaagtagaaaaagatattatacaaaagattatgaatgaaatctaacccta 26446160  T
Q  179 atttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttag 278  Q
    ||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||| ||  |||||||| ||||    
T  26446161 atttctataacatcaaaactaacaacaactacaagattaaaccatttttcagaattatacaacccattattagagaaagctagtcctacccttactttag 26446260  T
Q  279 gttagatgatcgcaaggtcctaccgctttctcttctctgactc 321  Q
    |||||||||||||||||| |||||||| |||||||||||||||    
T  26446261 gttagatgatcgcaaggttctaccgctctctcttctctgactc 26446303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 79 - 321
Target Start/End: Complemental strand, 2424585 - 2424343
Alignment:
Q  79 accaatttaatccacaataatcactttatacaaatatgcacttatgggtagaagtagaaaaagagattatacaaaagattatgaatgaaatctaacccta 178  Q
    ||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||    
T  2424585 accaattaaatccacaataatcactttatacaaataggcacttatgggtagaagtagaaaaatagattatacaaaagattatgaatgaaatcgaacccta 2424486  T
Q  179 atttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttag 278  Q
    |||||||||||||||||||||| |||||||||||| ||||||||||||||| |||||||||||  |  ||||||||||| || || ||||||||||||||    
T  2424485 atttctataacatcaaaactaataacaactacaagattaaaccctttttcaaaattatacaacttagaattagagaaagttagtctcacccttaccttag 2424386  T
Q  279 gttagatgatcgcaaggtcctaccgctttctcttctctgactc 321  Q
    |||||||||||||||||| ||| ||||||||||||||||||||    
T  2424385 gttagatgatcgcaaggttctaacgctttctcttctctgactc 2424343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 156; E-Value: 7e-83
Query Start/End: Original strand, 79 - 278
Target Start/End: Original strand, 14630991 - 14631188
Alignment:
Q  79 accaatttaatccacaataatcactttatacaaatatgcacttatgggtagaagtagaaaaagagattatacaaaagattatgaatgaaatctaacccta 178  Q
    ||||||| |||||||||||||||||||||||||||| |||||||||| ||||| |||||||| |||||||| ||||||||||||| ||||||||||||||    
T  14630991 accaattaaatccacaataatcactttatacaaataagcacttatggttagaattagaaaaa-agattata-aaaagattatgaacgaaatctaacccta 14631088  T
Q  179 atttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttag 278  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||    
T  14631089 atttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctagtctcacccttaccttag 14631188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 184 - 278
Target Start/End: Original strand, 16296897 - 16296991
Alignment:
Q  184 tataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttag 278  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||| || ||||||||||||||    
T  16296897 tataacatcaaaactaacaacaactaccaggttaaaccctttttcagaattatacaactcattattagagaaagctagtcccacccttaccttag 16296991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 169 - 290
Target Start/End: Original strand, 9638954 - 9639075
Alignment:
Q  169 tctaaccctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacc 268  Q
    ||||| ||||||| | | |||||||||| || ||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||| || ||||    
T  9638954 tctaaacctaattcccaaaacatcaaaattatcaacaactacaaggttaaaccctttttcagaattacacaactcattattagagaaagctagtcccacc 9639053  T
Q  269 cttaccttaggttagatgatcg 290  Q
    |||||||||| |||||| ||||    
T  9639054 cttaccttagattagattatcg 9639075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 175 - 271
Target Start/End: Original strand, 35660906 - 35661002
Alignment:
Q  175 cctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacaccctt 271  Q
    |||||||  |||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| || |||||||    
T  35660906 cctaattcatataacatcaaaactaacaacaactacaaggttaaaccatttttcataattatacaacccattattagagaaagctagtcccaccctt 35661002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 167 - 321
Target Start/End: Complemental strand, 26921619 - 26921465
Alignment:
Q  167 aatctaaccctaatttctataacatcaaaactaacaacaactac-aaggttaaaccctttttcagaattatacaacccattattagagaaagctattcac 265  Q
    |||||||||||||| ||||| ||||||||||||||||||||||| || |||||||||||||||||||||| |  ||  || ||||  ||| | || ||      
T  26921619 aatctaaccctaatctctatgacatcaaaactaacaacaactacaaatgttaaaccctttttcagaattaca-tacttatgattaatgaaggttagtcct 26921521  T
Q  266 acccttaccttaggttagatgatcgcaaggtcctaccgctttctcttctctgactc 321  Q
    |||||||||||||||||||||||| ||||||  |||||||||||||||||||||||    
T  26921520 acccttaccttaggttagatgatcacaaggttataccgctttctcttctctgactc 26921465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 172 - 290
Target Start/End: Original strand, 33186850 - 33186968
Alignment:
Q  172 aaccctaatttctataacatcaaaac-taacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacaccct 270  Q
    |||||||||| ||| ||||||||||| ||  |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||     
T  33186850 aaccctaatt-ctacaacatcaaaacctattaacaaccacaaggttaaaccctttttcagaattatacaacccattattagagaaagctagtctcacccc 33186948  T
Q  271 taccttaggttagatgatcg 290  Q
    |||||||  |||||||||||    
T  33186949 taccttaaattagatgatcg 33186968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 167 - 278
Target Start/End: Complemental strand, 15239927 - 15239815
Alignment:
Q  167 aatctaaccctaatttctataacatcaaaactaacaacaactacaa-ggttaaaccctttttcagaattatacaacccattattagagaaagctattcac 265  Q
    |||||||||||||| |||||||| ||||||| ||| ||||||| || ||||||||||||||||||| ||||||||  |||||||||||||||||| || |    
T  15239927 aatctaaccctaatctctataacctcaaaaccaacgacaactataaaggttaaaccctttttcagatttatacaattcattattagagaaagctagtctc 15239828  T
Q  266 acccttaccttag 278  Q
    |||||||||||||    
T  15239827 acccttaccttag 15239815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 172 - 290
Target Start/End: Complemental strand, 12424397 - 12424277
Alignment:
Q  172 aaccctaatttctataacatcaaaac-taacaacaactacaaggttaaacccttttt--cagaattatacaacccattattagagaaagctattcacacc 268  Q
    |||||||||| ||| ||||||||||| ||  ||||||||||| ||||||||||||||  ||||||||||||||||||||||||||||||||| || ||||    
T  12424397 aaccctaatt-ctacaacatcaaaacctattaacaactacaaagttaaaccctttttttcagaattatacaacccattattagagaaagctagtcccacc 12424299  T
Q  269 cttaccttaggttagatgatcg 290  Q
    |||||||||  |||||||||||    
T  12424298 cttaccttaaattagatgatcg 12424277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 171 - 278
Target Start/End: Original strand, 9622434 - 9622542
Alignment:
Q  171 taaccctaatttctataacatcaaaactaacaacaactacaag--gttaaaccctttttcagaattatacaacccattattagagaaagctattcacacc 268  Q
    ||||||||||||||||||||||||||||||||| ||| ||||   ||||||||| |||| ||||| | |||||||||||||||||||||||| || ||||    
T  9622434 taaccctaatttctataacatcaaaactaacaa-aacaacaacatgttaaacccctttttagaatcagacaacccattattagagaaagctagtcccacc 9622532  T
Q  269 cttaccttag 278  Q
    ||||||||||    
T  9622533 cttaccttag 9622542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 172 - 321
Target Start/End: Original strand, 46741147 - 46741295
Alignment:
Q  172 aaccctaatttctataacatcaaaactaac-aacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacaccct 270  Q
    |||||||||| ||| ||||||||||| ||  ||||||||||||||||||||||||||||| |||| | |    || |||| |||| | || || ||| ||    
T  46741147 aaccctaatt-ctacaacatcaaaaccaattaacaactacaaggttaaaccctttttcaggattacatattt-atgattaaagaaggttagtcccacact 46741244  T
Q  271 taccttaggttagatgatcgcaaggtcctaccgctttctcttctctgactc 321  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  46741245 taccttaggttagatgatcgcaaggttctaccgctttctcttctctgactc 46741295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 171 - 278
Target Start/End: Original strand, 55583141 - 55583249
Alignment:
Q  171 taaccctaatttctataacatcaaaactaacaacaactacaag--gttaaaccctttttcagaattatacaacccattattagagaaagctattcacacc 268  Q
    ||||||||||||||||||||||||||||||||| ||| ||||   ||||||||| |||| | ||| |||||||||||||||||||||||||| || ||||    
T  55583141 taaccctaatttctataacatcaaaactaacaa-aacaacaacatgttaaacccctttttataatcatacaacccattattagagaaagctagtcccacc 55583239  T
Q  269 cttaccttag 278  Q
    ||||||||||    
T  55583240 cttaccttag 55583249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 17 - 86
Target Start/End: Original strand, 26445871 - 26445940
Alignment:
Q  17 acatcacatgacaaaaacaacaacaatcagaagtgaattcatcaacaacaacattatactttaccaattt 86  Q
    ||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  26445871 acatctcataacaaaaacaacaacaatcagaagtgaattcatcaacaacaacattatacttcaccaattt 26445940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 17 - 86
Target Start/End: Complemental strand, 2424775 - 2424706
Alignment:
Q  17 acatcacatgacaaaaacaacaacaatcagaagtgaattcatcaacaacaacattatactttaccaattt 86  Q
    ||||| ||| |||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||    
T  2424775 acatctcataacaaaaacaataacaatcagaagtgaattcatcaacaacaacattatacttcaccaattt 2424706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 167 - 235
Target Start/End: Complemental strand, 45314193 - 45314124
Alignment:
Q  167 aatctaaccctaatttctataacatcaaaactaacaacaactac-aaggttaaaccctttttcagaatta 235  Q
    |||||||||||||| ||||||||||||||||||||||||||||| || ||||||||||||||||||||||    
T  45314193 aatctaaccctaatctctataacatcaaaactaacaacaactacaaatgttaaaccctttttcagaatta 45314124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 172 - 316
Target Start/End: Original strand, 12623264 - 12623407
Alignment:
Q  172 aaccctaatttctataacatcaaaac-taacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacaccct 270  Q
    |||||||||| ||| ||||||||||| ||  ||||||||||||||||||||||||||||| |||| | | || || |||| |||| | || || ||||||    
T  12623264 aaccctaatt-ctacaacatcaaaacctattaacaactacaaggttaaaccctttttcaggattacata-cctatgattaaagaaggttagtcccaccct 12623361  T
Q  271 taccttaggttagatgatcgcaaggtcctaccgctttctcttctct 316  Q
    |||||||| ||   |||||||||||| |||||||||||||||||||    
T  12623362 taccttagattgattgatcgcaaggttctaccgctttctcttctct 12623407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 217 - 282
Target Start/End: Original strand, 13847193 - 13847258
Alignment:
Q  217 aaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttaggtta 282  Q
    ||||| ||||| |||||||||||||||||||||||||||||||| || ||||||||||||||||||    
T  13847193 aaaccattttttagaattatacaacccattattagagaaagctagtctcacccttaccttaggtta 13847258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 17 - 86
Target Start/End: Complemental strand, 15747973 - 15747904
Alignment:
Q  17 acatcacatgacaaaaacaacaacaatcagaagtgaattcatcaacaacaacattatactttaccaattt 86  Q
    ||||| ||| ||||||||||||||||||||||||||| ||||||||| ||||||||||||| ||||||||    
T  15747973 acatctcataacaaaaacaacaacaatcagaagtgaagtcatcaacatcaacattatacttcaccaattt 15747904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 30 - 86
Target Start/End: Complemental strand, 16025993 - 16025937
Alignment:
Q  30 aaaacaacaacaatcagaagtgaattcatcaacaacaacattatactttaccaattt 86  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||    
T  16025993 aaaacaacaacaattagaagtgaattcatcaacaacaacattatacttcaccaattt 16025937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 171 - 237
Target Start/End: Original strand, 14477578 - 14477644
Alignment:
Q  171 taaccctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattata 237  Q
    ||||||||| ||||||||||||||||||| |||| |||||||| | |||||||||||||||||||||    
T  14477578 taaccctaacttctataacatcaaaactatcaacgactacaagatcaaaccctttttcagaattata 14477644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 30 - 86
Target Start/End: Original strand, 14630814 - 14630870
Alignment:
Q  30 aaaacaacaacaatcagaagtgaattcatcaacaacaacattatactttaccaattt 86  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||| || |||||    
T  14630814 aaaacaacaacgatcagaagtgaattcatcaacaacaacattatacttcacaaattt 14630870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 81 - 168
Target Start/End: Complemental strand, 19622179 - 19622093
Alignment:
Q  81 caatttaatccacaataatcactttatacaaatatgcacttatgggtagaagtagaaaaagagattatacaaaagattatgaatgaaa 168  Q
    ||||| ||| || |||||||||||||||||||||  ||||||||| |  ||| ||||||||||| |||||||||||||||||||||||    
T  19622179 caattaaattcataataatcactttatacaaataaacacttatggatttaagaagaaaaagaga-tatacaaaagattatgaatgaaa 19622093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 214 - 284
Target Start/End: Original strand, 10273372 - 10273442
Alignment:
Q  214 gttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttaga 284  Q
    |||| |||| |||| ||||| |||||||||||||||||||||||||| || |||||||||||||| |||||    
T  10273372 gttatacccctttttagaatcatacaacccattattagagaaagctagtcccacccttaccttagattaga 10273442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 201 - 263
Target Start/End: Original strand, 17142998 - 17143060
Alignment:
Q  201 caacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattc 263  Q
    |||||||||||| ||||||||| |||||||||||||||||| |||  ||||||||||||||||    
T  17142998 caacaactacaatgttaaaccccttttcagaattatacaactcatctttagagaaagctattc 17143060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 172 - 321
Target Start/End: Complemental strand, 19566022 - 19565874
Alignment:
Q  172 aaccctaatttctataacatcaaaac-taacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacaccct 270  Q
    |||||||||| ||| ||||||||||| ||  ||||||||||||||||||||||||||||| |||| | | |  || |||| |||| | || |  ||||||    
T  19566022 aaccctaatt-ctacaacatcaaaacctattaacaactacaaggttaaaccctttttcaggattacata-cttatgattaaagaaggttagtaccaccct 19565925  T
Q  271 taccttaggttagatgatcgcaaggtcctaccgctttctcttctctgactc 321  Q
    |||||||| ||   |||||||||||| ||||||||||||||||||| ||||    
T  19565924 taccttagattgattgatcgcaaggttctaccgctttctcttctcttactc 19565874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 201 - 257
Target Start/End: Complemental strand, 15747849 - 15747793
Alignment:
Q  201 caacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaag 257  Q
    |||||||||||| |||||||||||||||||||||||||||| |||  ||||||||||    
T  15747849 caacaactacaatgttaaaccctttttcagaattatacaactcatctttagagaaag 15747793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 17 - 86
Target Start/End: Original strand, 17142876 - 17142942
Alignment:
Q  17 acatcacatgacaaaaacaacaacaatcagaagtgaattcatcaacaacaacattatactttaccaattt 86  Q
    ||||| ||| |||||||||||||||||||||||||| |||||   |||||||||||||||| ||||||||    
T  17142876 acatctcataacaaaaacaacaacaatcagaagtgagttcat---caacaacattatacttcaccaattt 17142942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 175 - 237
Target Start/End: Original strand, 18462974 - 18463036
Alignment:
Q  175 cctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattata 237  Q
    ||||| || ||||||||||||||||  |||||||||||  |||||||||||||||||||||||    
T  18462974 cctaacttttataacatcaaaactattaacaactacaaaattaaaccctttttcagaattata 18463036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 91 - 162
Target Start/End: Complemental strand, 19080245 - 19080175
Alignment:
Q  91 cacaataatcactttatacaaatatgcacttatgggtagaagtagaaaaagagattatacaaaagattatga 162  Q
    |||||||||||||||  |||| || ||||||||||||  |||||| |||||||||||||||| |||||||||    
T  19080245 cacaataatcactttgcacaattaagcacttatgggtttaagtag-aaaagagattatacaagagattatga 19080175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 64
Target Start/End: Complemental strand, 10237454 - 10237422
Alignment:
Q  32 aacaacaacaatcagaagtgaattcatcaacaa 64  Q
    |||||||||||||||||||||||||||||||||    
T  10237454 aacaacaacaatcagaagtgaattcatcaacaa 10237422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 172 - 203
Target Start/End: Original strand, 16296819 - 16296850
Alignment:
Q  172 aaccctaatttctataacatcaaaactaacaa 203  Q
    ||||||||||||||||||||||||||||||||    
T  16296819 aaccctaatttctataacatcaaaactaacaa 16296850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 171 - 229
Target Start/End: Original strand, 20150771 - 20150830
Alignment:
Q  171 taaccctaatttctataacatcaaaac-taacaacaactacaaggttaaaccctttttca 229  Q
    |||||||||| ||| |||||||||||| ||  |||||||||||||||||| |||||||||    
T  20150771 taaccctaatctctttaacatcaaaacctattaacaactacaaggttaaatcctttttca 20150830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 290
Target Start/End: Original strand, 19610324 - 19610389
Alignment:
Q  225 tttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcg 290  Q
    |||||||||||||||||  |  ||||||||||| || || |||||||||||||  |||||||||||    
T  19610324 tttcagaattatacaacttaaaattagagaaagttagtctcacccttaccttaaattagatgatcg 19610389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 290
Target Start/End: Original strand, 25091653 - 25091718
Alignment:
Q  225 tttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcg 290  Q
    |||||||||||||||||  |  ||||||||||| || || |||||||||||||  |||||||||||    
T  25091653 tttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcg 25091718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 278
Target Start/End: Original strand, 37019670 - 37019723
Alignment:
Q  225 tttcagaattatacaacccattattagagaaagctattcacacccttaccttag 278  Q
    |||||||||||||||||  |  ||||||||||| || |||||||||||||||||    
T  37019670 tttcagaattatacaacttaaaattagagaaagttagtcacacccttaccttag 37019723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 225 - 289
Target Start/End: Complemental strand, 53630526 - 53630462
Alignment:
Q  225 tttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatc 289  Q
    |||||||||||||||||  |  ||||||||||| || || |||||||||||||  ||||||||||    
T  53630526 tttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatc 53630462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 211; Significance: 1e-115; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 79 - 321
Target Start/End: Original strand, 18129 - 18371
Alignment:
Q  79 accaatttaatccacaataatcactttatacaaatatgcacttatgggtagaagtagaaaaagagattatacaaaagattatgaatgaaatctaacccta 178  Q
    ||||||| ||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  18129 accaattaaatccacaataatcattttatacaaataagcacttatgggtagaagtagaaaaagagattatacagaagattatgaatgaaatctaacccta 18228  T
Q  179 atttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttag 278  Q
    |||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  18229 atttctataaaatcaaaaccaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctagtcacacccttaccttag 18328  T
Q  279 gttagatgatcgcaaggtcctaccgctttctcttctctgactc 321  Q
    |||||||||||||||||| ||||||||||||||||||||||||    
T  18329 gttagatgatcgcaaggttctaccgctttctcttctctgactc 18371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 211; Significance: 1e-115; HSPs: 55)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 79 - 321
Target Start/End: Original strand, 43745510 - 43745752
Alignment:
Q  79 accaatttaatccacaataatcactttatacaaatatgcacttatgggtagaagtagaaaaagagattatacaaaagattatgaatgaaatctaacccta 178  Q
    ||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  43745510 accaattaaatccacaataatcactttatacaaataggcacttatgggtagaagtagaaaaagagattatacaaaagattatgaatgaaatctaactcta 43745609  T
Q  179 atttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttag 278  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||| || ||||||||||||||    
T  43745610 atttctataacatcaaaactaacaacaactacaaggttaaaccctttttcataattatacaactcattattagagaaagctagtcccacccttaccttag 43745709  T
Q  279 gttagatgatcgcaaggtcctaccgctttctcttctctgactc 321  Q
    |||||||||||||||||| ||||||||||||||||||||||||    
T  43745710 gttagatgatcgcaaggttctaccgctttctcttctctgactc 43745752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 79 - 321
Target Start/End: Complemental strand, 48212927 - 48212683
Alignment:
Q  79 accaatttaatccacaataatcactttatacaaatatgcacttatgggtagaagtagaaaaagagattatacaaaagattatgaatgaaatctaacccta 178  Q
    ||||||| ||||||||||||||||||||||||||||  ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48212927 accaattaaatccacaataatcactttatacaaatagacacttttgggtagaagtagaaaaagagattatacaaaagattatgaatgaaatctaacccta 48212828  T
Q  179 atttctataacatcaaaactaacaacaactacaaggttaaaccc--tttttcagaattatacaacccattattagagaaagctattcacacccttacctt 276  Q
    |||||||||||||||||||||||||||| ||||| |||||||||  ||||| ||||| |||||||| |||||| |||||||||| |||||||||||||||    
T  48212827 atttctataacatcaaaactaacaacaattacaatgttaaacccctttttttagaatcatacaacctattattggagaaagctagtcacacccttacctt 48212728  T
Q  277 aggttagatgatcgcaaggtcctaccgctttctcttctctgactc 321  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||    
T  48212727 aggttagatgatcgcaaggttctaccactttctcttctctgactc 48212683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 87 - 278
Target Start/End: Complemental strand, 15575839 - 15575648
Alignment:
Q  87 aatccacaataatcactttatacaaatatgcacttatgggtagaagtagaaaaagagattatacaaaagattatgaatgaaatctaaccctaatttctat 186  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15575839 aatccacaataatcactttatacaaataagcacttatgggtagaagtagaaaaagagattatacaaaagattatgaatgaaatctaaccctaatttctat 15575740  T
Q  187 aacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttag 278  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||| ||||||||    
T  15575739 aacatcaaaactaacaacaagtacaaggttaaaccctttttcagaattatacaacccattattagagaaagctagtcccacccctaccttag 15575648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 87 - 321
Target Start/End: Complemental strand, 4690851 - 4690619
Alignment:
Q  87 aatccacaataatcactttatacaaatatgcacttatgggtagaagtagaaaaagagattatacaaaagattatgaatgaaatctaaccctaatttctat 186  Q
    |||||| |||||||||||||||||||||   |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  4690851 aatccataataatcactttatacaaatag--acttatgggtagaagtagaaaatgagattatacaaaagattatgaatgaaatctaaccctaatttctat 4690754  T
Q  187 aacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatg 286  Q
    |||||||||| ||| ||||||||||||||||||||||||||||||||||||||||  |  ||||||||||| || || |||| |||||||||||||||||    
T  4690753 aacatcaaaagtaataacaactacaaggttaaaccctttttcagaattatacaacttagaattagagaaagttagtcccacctttaccttaggttagatg 4690654  T
Q  287 atcgcaaggtcctaccgctttctcttctctgactc 321  Q
    |||||||||| ||| ||||||||||||||||||||    
T  4690653 atcgcaaggttctatcgctttctcttctctgactc 4690619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 79 - 278
Target Start/End: Original strand, 47095306 - 47095505
Alignment:
Q  79 accaatttaatccacaataatcactttatacaaatatgcacttatgggtagaagtagaaaaagagattatacaaaagattatgaatgaaatctaacccta 178  Q
    ||||||| ||||||||||||||||||||||||||||  ||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||    
T  47095306 accaattaaatccacaataatcactttatacaaatagacacttatgggtagaagtagaaaaagagtttatacaaaagattatgaatgaaatttaacccta 47095405  T
Q  179 atttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttag 278  Q
    ||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||| || ||||||||||||||    
T  47095406 atttctataacatcaaacctaacaacaactacaaggttaaaccatttttcagaattattcaacccattattagagaaagctagtcccacccttaccttag 47095505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 79 - 278
Target Start/End: Complemental strand, 18874859 - 18874664
Alignment:
Q  79 accaatttaatccacaataatcactttatacaaatatgcacttatgggtagaagtagaaaaagagattatacaaaagattatgaatgaaatctaacccta 178  Q
    ||||||| |||||||||||||||||||||||||||| |||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||||    
T  18874859 accaattaaatccacaataatcactttatacaaataggcacttatgggtagaag---aaaaagagattatacaaaagattatgaatgaaatctaacccta 18874763  T
Q  179 atttctataacatcaaaactaacaacaactacaaggttaaaccc--tttttcagaattatacaacccattattagagaaagctattcacacccttacctt 276  Q
    ||||||||||||||||||||   | |||||||||||||||||||  |||||||||||||||||||||||||||||||||||||| || ||||||||||||    
T  18874762 atttctataacatcaaaact---accaactacaaggttaaaccccttttttcagaattatacaacccattattagagaaagctagtctcacccttacctt 18874666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 82 - 278
Target Start/End: Complemental strand, 20252381 - 20252181
Alignment:
Q  82 aatttaatccacaataatcactttatacaaatatgcacttatgggtagaagtagaaaaagagattatacaaaagattatgaatgaa----atctaaccct 177  Q
    |||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||    |||||| |||    
T  20252381 aattaaatccacaataatcactttatacaaataggcacttatgggtagaagtagaaaaatagattatacaaaagattatgaatgaatgaaatctaatcct 20252282  T
Q  178 aatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttacctta 277  Q
    |||||||||||||| |||||||| ||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||| ||  ||||||||||||    
T  20252281 aatttctataacattaaaactaataacaactacaatgttaaaccctttttcagaattatacaactcattattagagaaagctagtcctacccttacctta 20252182  T
Q  278 g 278  Q
    |    
T  20252181 g 20252181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 120 - 240
Target Start/End: Original strand, 16186808 - 16186928
Alignment:
Q  120 ttatgggtagaagtagaaaaagagattatacaaaagattatgaatgaaatctaaccctaatttctataacatcaaaactaacaacaactacaaggttaaa 219  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||| | |||||||||    
T  16186808 ttatgggtagaagaagaaaaagagattatacaaaagattatgaatgaaatctaaccctaatttctataacatcaaaactactaacaaccataaggttaaa 16186907  T
Q  220 ccctttttcagaattatacaa 240  Q
    |||||||||||||||||||||    
T  16186908 ccctttttcagaattatacaa 16186928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 175 - 290
Target Start/End: Original strand, 19195562 - 19195676
Alignment:
Q  175 cctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttacc 274  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| || ||||||||||    
T  19195562 cctaattcctataacatcaaaactaacaacaactacaaggttaaaccctttt-cagaattatacaactcattattagagaaagctagtcccacccttacc 19195660  T
Q  275 ttaggttagatgatcg 290  Q
    |||| |||||||||||    
T  19195661 ttagattagatgatcg 19195676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 169 - 278
Target Start/End: Complemental strand, 708537 - 708428
Alignment:
Q  169 tctaaccctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacc 268  Q
    ||||| ||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||    
T  708537 tctaaacctaattcctataacatcaaaactaacagcaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctagtcccacc 708438  T
Q  269 cttaccttag 278  Q
    | ||||||||    
T  708437 cctaccttag 708428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 171 - 290
Target Start/End: Complemental strand, 58517 - 58400
Alignment:
Q  171 taaccctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacaccct 270  Q
    |||||||||||||| |||||||||||||||||| ||| ||| | |||||||| |||| ||||| |||||||||||||||||||||||||| || ||||||    
T  58517 taaccctaatttctttaacatcaaaactaacaa-aacaacatg-ttaaacccctttttagaatcatacaacccattattagagaaagctagtcccaccct 58420  T
Q  271 taccttaggttagatgatcg 290  Q
    |||||||| |||||||||||    
T  58419 taccttagattagatgatcg 58400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 202 - 282
Target Start/End: Complemental strand, 8513828 - 8513748
Alignment:
Q  202 aacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttaggtta 282  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || || ||||||||||||||||||    
T  8513828 aacaactacaaggttaaacccttttttagaattatacaacccattattagagaaagttagtcccacccttaccttaggtta 8513748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 171 - 288
Target Start/End: Complemental strand, 15700840 - 15700724
Alignment:
Q  171 taaccctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacaccct 270  Q
    ||||||||||||||||||||| |||||||||||||||||| | ||||||||| |||| ||||  |||||||||||||||||||||||||| |  || |||    
T  15700840 taaccctaatttctataacattaaaactaacaacaactac-atgttaaacccctttttagaaccatacaacccattattagagaaagctagtatcatcct 15700742  T
Q  271 taccttaggttagatgat 288  Q
    |||||||| ||| |||||    
T  15700741 taccttagattatatgat 15700724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 215 - 288
Target Start/End: Original strand, 38299738 - 38299811
Alignment:
Q  215 ttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgat 288  Q
    |||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||| |||||||||    
T  38299738 ttaaaccctttttcagaattatacaacccattattagagaaagctagtcccacccttaccttagattagatgat 38299811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 202 - 282
Target Start/End: Complemental strand, 8488169 - 8488089
Alignment:
Q  202 aacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttaggtta 282  Q
    |||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| || || ||||||||||||||||||    
T  8488169 aacaactataaggttaaacccttttttagaattatacaacccattattagagaaagttagtcccacccttaccttaggtta 8488089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 171 - 288
Target Start/End: Complemental strand, 8930872 - 8930754
Alignment:
Q  171 taaccctaatttctataacatcaaaactaacaacaactacaag--gttaaaccctttttcagaattatacaacccattattagagaaagctattcacacc 268  Q
    ||||||||||||||||||||||||||||||||| ||| ||||   ||||||||| |||| ||||| ||||||||||||||||||||||  || || ||||    
T  8930872 taaccctaatttctataacatcaaaactaacaa-aacaacaacatgttaaacccctttttagaatcatacaacccattattagagaaatgtagtcccacc 8930774  T
Q  269 cttaccttaggttagatgat 288  Q
    |||||||||| |||||||||    
T  8930773 cttaccttagattagatgat 8930754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 172 - 290
Target Start/End: Complemental strand, 43276848 - 43276731
Alignment:
Q  172 aaccctaatttctataacatcaaaac-taacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacaccct 270  Q
    |||||||||| ||| ||||||||||| ||  |||||||||||||||||||| |||| |||||||||||||||||||||||||||||| || || ||||||    
T  43276848 aaccctaatt-ctacaacatcaaaacctattaacaactacaaggttaaaccatttt-cagaattatacaacccattattagagaaagttagtcccaccct 43276751  T
Q  271 taccttaggttagatgatcg 290  Q
    |||||||  |||||||||||    
T  43276750 taccttaaattagatgatcg 43276731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 171 - 288
Target Start/End: Original strand, 25943213 - 25943330
Alignment:
Q  171 taaccctaatttctataacatcaaaacta-acaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacaccc 269  Q
    ||||||||||||||||||||||||||||| | |||||| | || ||||||||| |||||| ||  |||||||||||||||||||||||||| || |||||    
T  25943213 taaccctaatttctataacatcaaaactacaaaacaacga-aatgttaaaccccttttcaaaaacatacaacccattattagagaaagctagtcccaccc 25943311  T
Q  270 ttaccttaggttagatgat 288  Q
    ||||||||  |||||||||    
T  25943312 ttaccttatattagatgat 25943330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 17 - 86
Target Start/End: Complemental strand, 4691049 - 4690980
Alignment:
Q  17 acatcacatgacaaaaacaacaacaatcagaagtgaattcatcaacaacaacattatactttaccaattt 86  Q
    ||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  4691049 acatctcataacaaaaacaacaacaatcagaagtgaattcatcaacaacaacattatacttcaccaattt 4690980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 171 - 288
Target Start/End: Complemental strand, 13744614 - 13744499
Alignment:
Q  171 taaccctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacaccct 270  Q
    ||||||||||||||||||||| |||| |||||| ||| ||| | |||||||| |||| ||||| ||| |||||||||||||||||||||| || ||||||    
T  13744614 taaccctaatttctataacattaaaaataacaa-aacaacatg-ttaaacccctttttagaatcataaaacccattattagagaaagctagtcccaccct 13744517  T
Q  271 taccttaggttagatgat 288  Q
    |||||||| |||||||||    
T  13744516 taccttagattagatgat 13744499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 17 - 86
Target Start/End: Original strand, 43745320 - 43745389
Alignment:
Q  17 acatcacatgacaaaaacaacaacaatcagaagtgaattcatcaacaacaacattatactttaccaattt 86  Q
    ||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  43745320 acatctcataacaaaaacaacaacaatcagaagtgaattcatcaacaacaacattatacttcaccaattt 43745389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 17 - 86
Target Start/End: Complemental strand, 832050 - 831981
Alignment:
Q  17 acatcacatgacaaaaacaacaacaatcagaagtgaattcatcaacaacaacattatactttaccaattt 86  Q
    ||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  832050 acatctcataacaaaaacaacaacaatcagaagtgaattcatcaacaacaacattatacttcacccattt 831981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 17 - 86
Target Start/End: Complemental strand, 1197230 - 1197161
Alignment:
Q  17 acatcacatgacaaaaacaacaacaatcagaagtgaattcatcaacaacaacattatactttaccaattt 86  Q
    ||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  1197230 acatctcataacaaaaacaacaacaatcagaagtgaattcatcaacaacaacattatacttcacccattt 1197161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 17 - 86
Target Start/End: Original strand, 34958196 - 34958265
Alignment:
Q  17 acatcacatgacaaaaacaacaacaatcagaagtgaattcatcaacaacaacattatactttaccaattt 86  Q
    ||||| ||| ||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||    
T  34958196 acatctcataacaaaaacaacaacaatcaaaagtgaattcatcaacaacaacattatacttcaccaattt 34958265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 27 - 86
Target Start/End: Original strand, 47095126 - 47095185
Alignment:
Q  27 acaaaaacaacaacaatcagaagtgaattcatcaacaacaacattatactttaccaattt 86  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||    
T  47095126 acaaaaacaacaacaattagaagtgaattcatcaacaacaacattatacttcaccaattt 47095185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 171 - 278
Target Start/End: Complemental strand, 33556211 - 33556104
Alignment:
Q  171 taaccctaatttctataacatcaaaactaacaacaactacaag--gttaaaccctttttcagaattatacaacccattattagagaaagctattcacacc 268  Q
    ||||||||||||||||||||||||| ||||||| ||| ||||   ||||||||| |||| ||||| |||||||||||||||||||||||||| || ||||    
T  33556211 taaccctaatttctataacatcaaa-ctaacaa-aacaacaacatgttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacc 33556114  T
Q  269 cttaccttag 278  Q
    |||| |||||    
T  33556113 cttatcttag 33556104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 171 - 277
Target Start/End: Original strand, 15720724 - 15720831
Alignment:
Q  171 taaccctaatttctataacatcaaaactaacaacaactacaag--gttaaaccctttttcagaattatacaacccattattagagaaagctattcacacc 268  Q
    ||||| ||||||||||||||||||||||||||| ||| ||||   ||||||||| |||| ||||| |||||||||||||| ||||||||||| || ||||    
T  15720724 taaccataatttctataacatcaaaactaacaa-aacaacaacatgttaaacccctttttagaatcatacaacccattatgagagaaagctagtcccacc 15720822  T
Q  269 cttacctta 277  Q
     ||||||||    
T  15720823 tttacctta 15720831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 17 - 86
Target Start/End: Complemental strand, 48213101 - 48213032
Alignment:
Q  17 acatcacatgacaaaaacaacaacaatcagaagtgaattcatcaacaacaacattatactttaccaattt 86  Q
    ||||| ||| ||||||||||||||||| ||||||||||||||||||||||||||||||||| | ||||||    
T  48213101 acatctcataacaaaaacaacaacaattagaagtgaattcatcaacaacaacattatacttcatcaattt 48213032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 171 - 278
Target Start/End: Complemental strand, 36300745 - 36300640
Alignment:
Q  171 taaccctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacaccct 270  Q
    ||||||||||| ||||| ||||||||||||||| |  ||  | ||||||||| |||| ||||| |||||||||||||||||||||||||| || |||| |    
T  36300745 taaccctaattcctatatcatcaaaactaacaaaa--taacatgttaaacccctttttagaatcatacaacccattattagagaaagctagtctcacctt 36300648  T
Q  271 taccttag 278  Q
    ||||||||    
T  36300647 taccttag 36300640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 214 - 285
Target Start/End: Complemental strand, 13315145 - 13315074
Alignment:
Q  214 gttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagat 285  Q
    ||||||||| |||||||||| ||||||||||||||||||||||| || || |||||||||||||| ||||||    
T  13315145 gttaaaccccttttcagaatcatacaacccattattagagaaagatagtctcacccttaccttagattagat 13315074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 171 - 278
Target Start/End: Original strand, 18570592 - 18570700
Alignment:
Q  171 taaccctaatttctataacatcaaaactaacaacaactacaag--gttaaaccctttttcagaattatacaacccattattagagaaagctattcacacc 268  Q
    ||||| ||| ||||||||||||||||||||||| ||| ||||   ||||||||| |||  |||||  ||||||||||||||||||||||||| || ||||    
T  18570592 taaccataacttctataacatcaaaactaacaa-aacaacaatatgttaaacccctttctagaatcttacaacccattattagagaaagctagtctcacc 18570690  T
Q  269 cttaccttag 278  Q
    ||||||||||    
T  18570691 cttaccttag 18570700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 220 - 290
Target Start/End: Original strand, 19283051 - 19283121
Alignment:
Q  220 ccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcg 290  Q
    ||||||||||||||||||||||||||| |||||||||| || || |||||||||||||  |||||||||||    
T  19283051 ccctttttcagaattatacaacccattcttagagaaagttagtctcacccttaccttaaattagatgatcg 19283121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 214 - 278
Target Start/End: Complemental strand, 16250285 - 16250221
Alignment:
Q  214 gttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttag 278  Q
    |||||||||||||||| ||||||||||| ||||||||||||||| || || ||||||||||||||    
T  16250285 gttaaaccctttttcaaaattatacaactcattattagagaaagttagtcccacccttaccttag 16250221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 224 - 278
Target Start/End: Original strand, 3287743 - 3287797
Alignment:
Q  224 ttttcagaattatacaacccattattagagaaagctattcacacccttaccttag 278  Q
    ||||||||||||||||||| ||||||||||||||||| || ||||||||||||||    
T  3287743 ttttcagaattatacaacctattattagagaaagctagtctcacccttaccttag 3287797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 32 - 86
Target Start/End: Complemental strand, 18079671 - 18079617
Alignment:
Q  32 aacaacaacaatcagaagtgaattcatcaacaacaacattatactttaccaattt 86  Q
    ||||||||||||||||||||||||||||||||| ||||||||| || ||||||||    
T  18079671 aacaacaacaatcagaagtgaattcatcaacaataacattatatttcaccaattt 18079617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 175 - 237
Target Start/End: Complemental strand, 42565934 - 42565872
Alignment:
Q  175 cctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattata 237  Q
    ||||| |||||||||| ||||| || ||||||||||||| |||||||||||||||||||||||    
T  42565934 cctaacttctataacaacaaaattatcaacaactacaagattaaaccctttttcagaattata 42565872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 94 - 177
Target Start/End: Complemental strand, 16368354 - 16368271
Alignment:
Q  94 aataatcactttatacaaatatgcacttatgggtagaagtagaaaaagagattatacaa-aagattatgaatgaaatctaaccct 177  Q
    |||||||| |||  |||| || |||||||||||||||||||| |||| ||||||||||| |||||||||||||||| ||||||||    
T  16368354 aataatcaatttgcacaattaagcacttatgggtagaagtag-aaaatagattatacaagaagattatgaatgaaaactaaccct 16368271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 201 - 260
Target Start/End: Original strand, 34958321 - 34958380
Alignment:
Q  201 caacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagcta 260  Q
    |||||||||||| |||||| ||||||||||||||||||||| |||  |||||||||||||    
T  34958321 caacaactacaatgttaaatcctttttcagaattatacaactcatctttagagaaagcta 34958380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 201 - 256
Target Start/End: Complemental strand, 831926 - 831871
Alignment:
Q  201 caacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaa 256  Q
    |||||||||||| |||||||||||||| |||||| ||||||||||  |||||||||    
T  831926 caacaactacaatgttaaacccttttttagaattgtacaacccatctttagagaaa 831871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 201 - 256
Target Start/End: Complemental strand, 1197106 - 1197051
Alignment:
Q  201 caacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaa 256  Q
    |||||||||||| |||||||||||||| |||||| ||||||||||  |||||||||    
T  1197106 caacaactacaatgttaaacccttttttagaattgtacaacccatctttagagaaa 1197051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 225 - 290
Target Start/End: Complemental strand, 12127215 - 12127150
Alignment:
Q  225 tttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcg 290  Q
    |||||||||||||||||  |  ||||||||||| || || |||||||||||||| |||||||||||    
T  12127215 tttcagaattatacaacttagaattagagaaagttagtcccacccttaccttagattagatgatcg 12127150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 169 - 229
Target Start/End: Original strand, 16496154 - 16496215
Alignment:
Q  169 tctaaccctaatttctataa-catcaaaactaacaacaactacaaggttaaaccctttttca 229  Q
    |||||||||||||||| ||| | ||||| ||||| ||||||||||||||||||| |||||||    
T  16496154 tctaaccctaatttctctaatcctcaaacctaacgacaactacaaggttaaaccatttttca 16496215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 225 - 321
Target Start/End: Complemental strand, 24269999 - 24269902
Alignment:
Q  225 tttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcgcaaggtcctac-cgctttctcttctctgactc 321  Q
    |||||||||||||||||  |  ||||||||||| || || |||||||||||||| || | ||||  |||||| ||||  |||||||||||||||||||    
T  24269999 tttcagaattatacaacttaaaattagagaaagttaatcccacccttaccttagattggttgattacaaggttctacaagctttctcttctctgactc 24269902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 225 - 290
Target Start/End: Original strand, 44374843 - 44374908
Alignment:
Q  225 tttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcg 290  Q
    |||||||||||||||||  |  ||||||||||| || || |||||||||||||| |||||||||||    
T  44374843 tttcagaattatacaacttagaattagagaaagttactctcacccttaccttagattagatgatcg 44374908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 225 - 290
Target Start/End: Original strand, 44383708 - 44383773
Alignment:
Q  225 tttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcg 290  Q
    |||||||||||||||||  |  ||||||||||| || || |||||||||||||| |||||||||||    
T  44383708 tttcagaattatacaacttagaattagagaaagttactctcacccttaccttagattagatgatcg 44383773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 235
Target Start/End: Complemental strand, 9743183 - 9743120
Alignment:
Q  172 aaccctaatttctataacatcaaaactaac-aacaactacaaggttaaaccctttttcagaatta 235  Q
    |||||||||| ||| |||||||||||| |  ||||||||||||||||||||||||||||| ||||    
T  9743183 aaccctaatt-ctacaacatcaaaacttattaacaactacaaggttaaaccctttttcaggatta 9743120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 209 - 273
Target Start/End: Complemental strand, 15700951 - 15700887
Alignment:
Q  209 acaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttac 273  Q
    |||| ||||||||| |||| ||||| ||||||| |||||||||||||||||| || | |||||||    
T  15700951 acaatgttaaacccctttttagaatcatacaactcattattagagaaagctagtctcccccttac 15700887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 172 - 229
Target Start/End: Complemental strand, 15119411 - 15119354
Alignment:
Q  172 aaccctaatttctataacatcaaaa-ctaacaacaactacaaggttaaaccctttttca 229  Q
    |||||||||| ||| |||||||||| |||  ||||||||||||||||||||||||||||    
T  15119411 aaccctaatt-ctacaacatcaaaatctattaacaactacaaggttaaaccctttttca 15119354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 290
Target Start/End: Complemental strand, 8851211 - 8851146
Alignment:
Q  225 tttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcg 290  Q
    |||||||||||||||||  |  ||||||||||| || || |||||||||||||  |||||||||||    
T  8851211 tttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcg 8851146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 290
Target Start/End: Original strand, 11067468 - 11067533
Alignment:
Q  225 tttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcg 290  Q
    |||||||||||||||||  |  ||||||||||| || || |||||||||||||  |||||||||||    
T  11067468 tttcagaattatacaacttagaattagagaaagttagtctcacccttaccttaaattagatgatcg 11067533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 290
Target Start/End: Original strand, 12372274 - 12372339
Alignment:
Q  225 tttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcg 290  Q
    |||||||||||||||||  |  ||||||||||| || || |||||||||||||  |||||||||||    
T  12372274 tttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcg 12372339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 290
Target Start/End: Complemental strand, 12465312 - 12465247
Alignment:
Q  225 tttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcg 290  Q
    |||||||||||||||||  |  ||||||||||| || || |||||||||||||  |||||||||||    
T  12465312 tttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcg 12465247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 290
Target Start/End: Complemental strand, 32433641 - 32433576
Alignment:
Q  225 tttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcg 290  Q
    |||||||||||||||||  |  ||||||||||| || || |||||||||||||  |||||||||||    
T  32433641 tttcagaattatacaacttagaattagagaaagttagtctcacccttaccttaaattagatgatcg 32433576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 172 - 235
Target Start/End: Complemental strand, 14160960 - 14160897
Alignment:
Q  172 aaccctaatttctataacatcaaaac-taacaacaactacaaggttaaaccctttttcagaatta 235  Q
    |||||||||| ||| ||||||||||| ||  ||||||||||||||||||||| ||||||| ||||    
T  14160960 aaccctaatt-ctacaacatcaaaacctattaacaactacaaggttaaaccccttttcaggatta 14160897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 172 - 235
Target Start/End: Original strand, 14318020 - 14318083
Alignment:
Q  172 aaccctaatttctataacatcaaaac-taacaacaactacaaggttaaaccctttttcagaatta 235  Q
    |||||||||| ||| ||||||||||| ||  ||||||| ||||||||||||||||||||| ||||    
T  14318020 aaccctaatt-ctacaacatcaaaacctattaacaactgcaaggttaaaccctttttcaggatta 14318083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 199; Significance: 1e-108; HSPs: 45)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 79 - 321
Target Start/End: Original strand, 21514545 - 21514787
Alignment:
Q  79 accaatttaatccacaataatcactttatacaaatatgcacttatgggtagaagtagaaaaagagattatacaaaagattatgaatgaaatctaacccta 178  Q
    ||||||| |||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  21514545 accaattaaatccacaataatcactttatacaaataggcacttatgggtagaagtataaaaagagattatacaaaagattatgaatgaaatctaacccta 21514644  T
Q  179 atttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttag 278  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||| ||| || |||||||||||||     
T  21514645 atttctataacatcaaaactaacaacaactacaaggttaaaccctttttaagaattatacaactcattattagagaaatctagtcccacccttaccttaa 21514744  T
Q  279 gttagatgatcgcaaggtcctaccgctttctcttctctgactc 321  Q
    |||||||||||||||||| |||||||||||||||||| |||||    
T  21514745 gttagatgatcgcaaggttctaccgctttctcttctccgactc 21514787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 171; E-Value: 8e-92
Query Start/End: Original strand, 79 - 277
Target Start/End: Complemental strand, 18816493 - 18816295
Alignment:
Q  79 accaatttaatccacaataatcactttatacaaatatgcacttatgggtagaagtagaaaaagagattatacaaaagattatgaatgaaatctaacccta 178  Q
    ||||||| ||||||||||||||||||||||||||||  |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18816493 accaattaaatccacaataatcactttatacaaatagacacttatgagtagaagtagaaaaagagattatacaaaagattatgaatgaaatctaacccta 18816394  T
Q  179 atttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttacctta 277  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| || |||||||||||||    
T  18816393 atttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccatttttagagaaagctagtcccacccttacctta 18816295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 158; E-Value: 5e-84
Query Start/End: Original strand, 79 - 321
Target Start/End: Complemental strand, 4380807 - 4380573
Alignment:
Q  79 accaatttaatccacaataatcactttatacaaatatgcacttatgggtagaagtagaaaaagagattatacaaaagattatgaatgaaatctaacccta 178  Q
    ||||||| ||| |||||||||||||||||||||||| ||         ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4380807 accaattaaattcacaataatcactttatacaaataggct--------tagaagtagaaaaagagattatacaaaagattatgaatgaaatctaacccta 4380716  T
Q  179 atttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttag 278  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |  ||||||||||| || || ||||||||||||||    
T  4380715 atttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacttagaattagagaaagttagtcccacccttaccttag 4380616  T
Q  279 gttagatgatcgcaaggtcctaccgctttctcttctctgactc 321  Q
    |||||||||||||||||| |||| ||||||||||||| |||||    
T  4380615 gttagatgatcgcaaggttctacggctttctcttctccgactc 4380573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 175 - 321
Target Start/End: Complemental strand, 36732514 - 36732368
Alignment:
Q  175 cctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttacc 274  Q
    ||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  36732514 cctaattcctataacatcaaaactaacaacaactacaaggttaaactctttttcagaattatacaacccattattagagaaagctagtcacacccttacc 36732415  T
Q  275 ttaggttagatgatcgcaaggtcctaccgctttctcttctctgactc 321  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||    
T  36732414 ttaggttagatgatcgcaaggttctaccgctttctcttctctgactc 36732368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 172 - 290
Target Start/End: Original strand, 22208216 - 22208334
Alignment:
Q  172 aaccctaatttctataacatcaaaac-taacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacaccct 270  Q
    |||||||||| ||| ||||||||||| ||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||    
T  22208216 aaccctaatt-ctacaacatcaaaacctattaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctagtcccaccct 22208314  T
Q  271 taccttaggttagatgatcg 290  Q
    |||||||| |||||||||||    
T  22208315 taccttagattagatgatcg 22208334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 172 - 278
Target Start/End: Original strand, 12577826 - 12577932
Alignment:
Q  172 aaccctaatttctataacatcaaaactaacaacaacta-caaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacaccct 270  Q
    ||||||||| ||||||||||||||||||||||||||||  |||||||||||||||||| ||||||||||| | |||||||||||||| || || ||||||    
T  12577826 aaccctaatctctataacatcaaaactaacaacaactataaaggttaaaccctttttcggaattatacaa-ctattattagagaaagttagtcccaccct 12577924  T
Q  271 taccttag 278  Q
    ||||||||    
T  12577925 taccttag 12577932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 171 - 278
Target Start/End: Original strand, 21399662 - 21399770
Alignment:
Q  171 taaccctaatttctataacatcaaaactaacaacaactacaag--gttaaaccctttttcagaattatacaacccattattagagaaagctattcacacc 268  Q
    ||||||||||||||||||||||||||||||||| ||| ||||   ||||||||| |||| ||||| |||||||||||||||||||||||||| || ||||    
T  21399662 taaccctaatttctataacatcaaaactaacaa-aacaacaacatgttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacc 21399760  T
Q  269 cttaccttag 278  Q
    ||||||||||    
T  21399761 cttaccttag 21399770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 164 - 278
Target Start/End: Complemental strand, 21676704 - 21676592
Alignment:
Q  164 tgaaatctaaccctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattc 263  Q
    |||||| ||| |||||||||||||| |||||||||| |||||||||||| |||||||||| ||||| ||||||| ||||||||||||||| |||||| ||    
T  21676704 tgaaatttaaacctaatttctataatatcaaaactatcaacaactacaaagttaaaccctatttcataattata-aacccattattagag-aagctagtc 21676607  T
Q  264 acacccttaccttag 278  Q
     ||||||||||||||    
T  21676606 ccacccttaccttag 21676592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 171 - 278
Target Start/End: Original strand, 21794155 - 21794263
Alignment:
Q  171 taaccctaatttctataacatcaaaactaacaacaactacaag--gttaaaccctttttcagaattatacaacccattattagagaaagctattcacacc 268  Q
    ||||||||||||||||||||||||||||||||| ||| ||||   ||||||||| |||| ||||| |||||||||||||||||||||||||| || ||||    
T  21794155 taaccctaatttctataacatcaaaactaacaa-aacaacaacatgttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacc 21794253  T
Q  269 cttaccttag 278  Q
    ||||||||||    
T  21794254 cttaccttag 21794263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 181 - 290
Target Start/End: Complemental strand, 22258403 - 22258293
Alignment:
Q  181 ttctataacatcaaaac-taacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttagg 279  Q
    ||||| ||||||||||| || |||||||| ||||||||||||||||||  |||||||||||| |||||||||||||||||| || |||||||||||||      
T  22258403 ttctacaacatcaaaacctatcaacaactgcaaggttaaacccttttttggaattatacaactcattattagagaaagctagtctcacccttaccttaaa 22258304  T
Q  280 ttagatgatcg 290  Q
    |||||||||||    
T  22258303 ttagatgatcg 22258293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 171 - 290
Target Start/End: Original strand, 18834371 - 18834487
Alignment:
Q  171 taaccctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacaccct 270  Q
    ||||||||||||||||||||||||||||||||| ||| ||| | |||||||| |||| ||||| |||||| ||||||||||||||||||| || ||||||    
T  18834371 taaccctaatttctataacatcaaaactaacaa-aacaacatg-ttaaacccctttt-agaatcatacaatccattattagagaaagctagtcccaccct 18834467  T
Q  271 taccttaggttagatgatcg 290  Q
    |||||||  |||||||||||    
T  18834468 taccttaaattagatgatcg 18834487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 17 - 86
Target Start/End: Complemental strand, 38185113 - 38185044
Alignment:
Q  17 acatcacatgacaaaaacaacaacaatcagaagtgaattcatcaacaacaacattatactttaccaattt 86  Q
    ||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  38185113 acatctcataacaaaaacaacaacaatcagaagtgaattcatcaacaacaacattatacttcaccaattt 38185044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 175 - 278
Target Start/End: Complemental strand, 21678946 - 21678845
Alignment:
Q  175 cctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttacc 274  Q
    ||||||| |||||| |||||||||| |||||||||||| |||||||||| ||||| ||||||| ||||||||||||||| |||||| || ||||||||||    
T  21678946 cctaattgctataatatcaaaactatcaacaactacaaagttaaaccctatttcataattata-aacccattattagag-aagctagtcccacccttacc 21678849  T
Q  275 ttag 278  Q
    ||||    
T  21678848 ttag 21678845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 247 - 321
Target Start/End: Original strand, 5761555 - 5761629
Alignment:
Q  247 attagagaaagctattcacacccttaccttaggttagatgatcgcaaggtcctaccgctttctcttctctgactc 321  Q
    ||||||||||| || || |||||||||||||||||||||||||||||||| |||||| |||||||||||||||||    
T  5761555 attagagaaagttagtcccacccttaccttaggttagatgatcgcaaggttctaccgttttctcttctctgactc 5761629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 172 - 321
Target Start/End: Complemental strand, 17978520 - 17978372
Alignment:
Q  172 aaccctaatttctataacatcaaaac-taacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacaccct 270  Q
    |||||||||| ||| ||||||||||| ||  |||||||||||||||||| |||||||||| |||| | | |  || |||| ||||   || || ||||||    
T  17978520 aaccctaatt-ctacaacatcaaaacctattaacaactacaaggttaaatcctttttcaggattacata-cttatgattatagaagtttagtcccaccct 17978423  T
Q  271 taccttaggttagatgatcgcaaggtcctaccgctttctcttctctgactc 321  Q
    |||||||| ||||||||||||||||| ||||||||||||||||||||||||    
T  17978422 taccttagtttagatgatcgcaaggttctaccgctttctcttctctgactc 17978372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 17 - 86
Target Start/End: Complemental strand, 18023722 - 18023653
Alignment:
Q  17 acatcacatgacaaaaacaacaacaatcagaagtgaattcatcaacaacaacattatactttaccaattt 86  Q
    ||||| ||| |||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||    
T  18023722 acatctcataacaaaaacaataacaatcagaagtgaattcatcaacaacaacattatacttcaccaattt 18023653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 17 - 86
Target Start/End: Complemental strand, 20494701 - 20494632
Alignment:
Q  17 acatcacatgacaaaaacaacaacaatcagaagtgaattcatcaacaacaacattatactttaccaattt 86  Q
    ||||| ||| ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||    
T  20494701 acatctcataacaaaaacaacaacaatcagaagtgaattcatcaacaacaatattatacttcaccaattt 20494632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 214 - 273
Target Start/End: Original strand, 22483775 - 22483834
Alignment:
Q  214 gttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttac 273  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||    
T  22483775 gttaaaccctttttcagaattatacaacccattattagagaaagctagtcccacccttac 22483834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 214 - 288
Target Start/End: Original strand, 22345153 - 22345227
Alignment:
Q  214 gttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgat 288  Q
    ||||||||| ||||| |||| |||||||||||||||||||||||||| || |||||||||||||| |||||||||    
T  22345153 gttaaaccccttttcggaatcatacaacccattattagagaaagctagtcccacccttaccttagattagatgat 22345227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 214 - 288
Target Start/End: Original strand, 22356813 - 22356887
Alignment:
Q  214 gttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgat 288  Q
    ||||||||| ||||| |||| |||||||||||||||||||||||||| || |||||||||||||| |||||||||    
T  22356813 gttaaaccccttttcggaatcatacaacccattattagagaaagctagtcccacccttaccttagattagatgat 22356887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 29 - 86
Target Start/End: Original strand, 21514367 - 21514424
Alignment:
Q  29 aaaaacaacaacaatcagaagtgaattcatcaacaacaacattatactttaccaattt 86  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||    
T  21514367 aaaaacaacaacaatcagaagtaaattcatcaacaacaacattatacttcaccaattt 21514424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 190 - 278
Target Start/End: Complemental strand, 21676585 - 21676499
Alignment:
Q  190 atcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttag 278  Q
    |||||||||| |||||||||||| |||||||||| ||||| ||||||| ||||||||||||||| |||||| || ||||||||||||||    
T  21676585 atcaaaactatcaacaactacaaagttaaaccctatttcataattata-aacccattattagag-aagctagtcccacccttaccttag 21676499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 171 - 278
Target Start/End: Complemental strand, 22610371 - 22610266
Alignment:
Q  171 taaccctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacaccct 270  Q
    ||||| ||||||||||||||||||||||||||| |  ||  | ||||||||| |||| ||||| ||||||| ||||||||||||||| || || ||||||    
T  22610371 taaccataatttctataacatcaaaactaacaaaa--taacatgttaaacccctttttagaatcatacaactcattattagagaaagttagtcccaccct 22610274  T
Q  271 taccttag 278  Q
    ||||||||    
T  22610273 taccttag 22610266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 171 - 287
Target Start/End: Original strand, 23884116 - 23884231
Alignment:
Q  171 taaccctaatttctataacatcaaaactaacaaca--actacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacc 268  Q
    ||||||||||||||||||||||||||||||||| |  || ||| | |||||||| |||| ||||| ||||||||||||  |||||||||||| || | ||    
T  23884116 taaccctaatttctataacatcaaaactaacaaaagaacaacatg-ttaaacccctttttagaatcatacaacccatt--tagagaaagctagtcccgcc 23884212  T
Q  269 cttaccttaggttagatga 287  Q
    |||||||||| ||||||||    
T  23884213 cttaccttagattagatga 23884231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 201 - 260
Target Start/End: Complemental strand, 18023632 - 18023573
Alignment:
Q  201 caacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagcta 260  Q
    |||||||||||| ||||||||||||||||||||||||||||||||  |||||||||||||    
T  18023632 caacaactacaatgttaaaccctttttcagaattatacaacccatctttagagaaagcta 18023573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 172 - 321
Target Start/End: Original strand, 22474704 - 22474852
Alignment:
Q  172 aaccctaatttctataacatcaaaac-taacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacaccct 270  Q
    |||||||||| ||| ||||||||||| ||  ||||||||||||||||||||||||||||| |||| |  ||  || |||| |||| | || || ||||||    
T  22474704 aaccctaatt-ctacaacatcaaaacctattaacaactacaaggttaaaccctttttcaggattaca-tacttatgattaaagaaggttagtcccaccct 22474801  T
Q  271 taccttaggttagatgatcgcaaggtcctaccgctttctcttctctgactc 321  Q
    |||||||| ||   |||||||||||| ||||||||||||||||| ||||||    
T  22474802 taccttagattgattgatcgcaaggttctaccgctttctcttctttgactc 22474852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 215 - 290
Target Start/End: Original strand, 36305988 - 36306062
Alignment:
Q  215 ttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcg 290  Q
    ||||| ||||||||||||| ||||||||  |||||||||||||||| || |||||||||||||| |||||||||||    
T  36305988 ttaaaacctttttcagaatcatacaaccg-ttattagagaaagctagtctcacccttaccttagattagatgatcg 36306062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 205 - 260
Target Start/End: Complemental strand, 38184984 - 38184929
Alignment:
Q  205 aactacaaggttaaaccctttttcagaattatacaacccattattagagaaagcta 260  Q
    |||||||| ||||||||||||||||||||||||||||||||  |||||||||||||    
T  38184984 aactacaatgttaaaccctttttcagaattatacaacccatctttagagaaagcta 38184929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 199 - 257
Target Start/End: Original strand, 22483912 - 22483970
Alignment:
Q  199 aacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaag 257  Q
    ||||||||| || | |||||||||||||| ||||||||||||| |||||||||||||||    
T  22483912 aacaacaacaaccatgttaaaccctttttaagaattatacaactcattattagagaaag 22483970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 32 - 86
Target Start/End: Original strand, 22366072 - 22366123
Alignment:
Q  32 aacaacaacaatcagaagtgaattcatcaacaacaacattatactttaccaattt 86  Q
    |||||||||||||||||||||||||||   |||||||||||||||| ||||||||    
T  22366072 aacaacaacaatcagaagtgaattcat---caacaacattatacttcaccaattt 22366123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 172 - 290
Target Start/End: Complemental strand, 21579310 - 21579193
Alignment:
Q  172 aaccctaatttctataacatcaaaac-taacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacaccct 270  Q
    |||||||||| ||| ||||||||||| ||  ||||||||||||||||||||||||||||| |||| |  ||  || |||| |||| | || |||||||||    
T  21579310 aaccctaatt-ctacaacatcaaaacatattaacaactacaaggttaaaccctttttcaggattaca-tacttatgattaaagaaggttagtcacaccct 21579213  T
Q  271 taccttaggttagatgatcg 290  Q
    |||||||  |||||||||||    
T  21579212 taccttaaattagatgatcg 21579193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 265 - 321
Target Start/End: Complemental strand, 22317923 - 22317867
Alignment:
Q  265 cacccttaccttaggttagatgatcgcaaggtcctaccgctttctcttctctgactc 321  Q
    |||||||||||||| ||   |||||||||||| |||||||||||||| |||||||||    
T  22317923 cacccttaccttagattgattgatcgcaaggttctaccgctttctctcctctgactc 22317867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 321
Target Start/End: Complemental strand, 22532184 - 22532088
Alignment:
Q  225 tttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcgcaaggtcctaccgctttctcttctctgactc 321  Q
    ||||||||| |||||||  |  ||||||||||| || || |||||||||||||| ||   ||||||| |||| ||| || |||||||||||||||||    
T  22532184 tttcagaatcatacaacttagaattagagaaagttagtcccacccttaccttagattgattgatcgcgaggttctatcgttttctcttctctgactc 22532088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 321
Target Start/End: Complemental strand, 22536869 - 22536773
Alignment:
Q  225 tttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcgcaaggtcctaccgctttctcttctctgactc 321  Q
    ||||||||| |||||||  |  ||||||||||| || || |||||||||||||| ||   ||||||| |||| ||| || |||||||||||||||||    
T  22536869 tttcagaatcatacaacttagaattagagaaagttagtcccacccttaccttagattgattgatcgcgaggttctatcgttttctcttctctgactc 22536773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 181 - 235
Target Start/End: Complemental strand, 12037260 - 12037205
Alignment:
Q  181 ttctataacatcaaaa-ctaacaacaactacaaggttaaaccctttttcagaatta 235  Q
    ||||| |||||||||| |||  ||||||||||||||||||||||||||||| ||||    
T  12037260 ttctacaacatcaaaagctattaacaactacaaggttaaaccctttttcaggatta 12037205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 171 - 229
Target Start/End: Original strand, 22966756 - 22966815
Alignment:
Q  171 taaccctaatttctataacatcaaaac-taacaacaactacaaggttaaaccctttttca 229  Q
    ||||||||||  || |||||||||||| ||  ||||||||||||||||||||||||||||    
T  22966756 taaccctaatcgctttaacatcaaaacctattaacaactacaaggttaaaccctttttca 22966815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 181 - 235
Target Start/End: Complemental strand, 29762964 - 29762909
Alignment:
Q  181 ttctataacatcaaaactaac-aacaactacaaggttaaaccctttttcagaatta 235  Q
    ||||| |||||||||||| |  ||||||||||||||||||||||||||||| ||||    
T  29762964 ttctacaacatcaaaacttattaacaactacaaggttaaaccctttttcaggatta 29762909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 290
Target Start/End: Complemental strand, 20022093 - 20022027
Alignment:
Q  224 ttttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcg 290  Q
    ||||||||||||||| ||  |  ||||||||||| || || |||||||||||||| |||||||||||    
T  20022093 ttttcagaattataccacttagaattagagaaagttagtcccacccttaccttagattagatgatcg 20022027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 86
Target Start/End: Original strand, 22723251 - 22723305
Alignment:
Q  32 aacaacaacaatcagaagtgaattcatcaacaacaacattatactttaccaattt 86  Q
    ||||| ||||||||||||||||||||||||||| ||||  |||||| | ||||||    
T  22723251 aacaaaaacaatcagaagtgaattcatcaacaataacaaaatacttcatcaattt 22723305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 225 - 283
Target Start/End: Complemental strand, 39694329 - 39694271
Alignment:
Q  225 tttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttag 283  Q
    ||||||||| |||||||  || |||||||||||||| |||| ||||||| |||||||||    
T  39694329 tttcagaatcatacaacttataattagagaaagctagtcacgcccttacattaggttag 39694271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 321
Target Start/End: Complemental strand, 20397562 - 20397465
Alignment:
Q  225 tttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcgcaaggtcctac-cgctttctcttctctgactc 321  Q
    |||||||||||||||||  |  ||||||||||| || || |||||||||||||| || | ||||  |||||| ||||  |||||||||||| ||||||    
T  20397562 tttcagaattatacaacttagaattagagaaagttaatcccacccttaccttagattggttgattacaaggttctacaagctttctcttctatgactc 20397465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 227
Target Start/End: Complemental strand, 21697566 - 21697509
Alignment:
Q  171 taaccctaatttctataacatcaaaac-taacaacaactacaaggttaaacccttttt 227  Q
    |||||||||| ||| |||||||||||| ||  ||||||||||| ||||||||||||||    
T  21697566 taaccctaatctctttaacatcaaaacctattaacaactacaatgttaaacccttttt 21697509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 282
Target Start/End: Original strand, 23889799 - 23889856
Alignment:
Q  225 tttcagaattatacaacccattattagagaaagctattcacacccttaccttaggtta 282  Q
    |||||||||||||||||| |  ||||||||||| || || |||||||| |||||||||    
T  23889799 tttcagaattatacaacctagaattagagaaagttaatctcacccttagcttaggtta 23889856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 32 - 64
Target Start/End: Original strand, 24907883 - 24907915
Alignment:
Q  32 aacaacaacaatcagaagtgaattcatcaacaa 64  Q
    |||||||||||||| ||||||||||||||||||    
T  24907883 aacaacaacaatcaaaagtgaattcatcaacaa 24907915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 172 - 235
Target Start/End: Complemental strand, 41680237 - 41680174
Alignment:
Q  172 aaccctaatttctataacatcaaaac-taacaacaactacaaggttaaaccctttttcagaatta 235  Q
    |||||||||| ||| ||||||||||| ||  |||||||||||||||||||||||| |||| ||||    
T  41680237 aaccctaatt-ctacaacatcaaaacctattaacaactacaaggttaaaccctttatcaggatta 41680174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 195; Significance: 1e-106; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 79 - 321
Target Start/End: Original strand, 660644 - 660884
Alignment:
Q  79 accaatttaatccacaataatcactttatacaaatatgcacttatgggtagaagtagaaaaagagattatacaaaagattatgaatgaaatctaacccta 178  Q
    ||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  660644 accaattaaatccacaataatcactttatacaaataggcacttatgggtagaagtagaaaaagagattatacaaaagattatgaatgaaatctaacccaa 660743  T
Q  179 atttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttag 278  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||| || | ||||||||||||    
T  660744 atttctataacatcaaaactaacaacaactacaaggttaaa-cctttttcagaattatacaaccccttattagagaaagctagtc-cccccttaccttag 660841  T
Q  279 gttagatgatcgcaaggtcctaccgctttctcttctctgactc 321  Q
    |||||||||||||||||| |||||||||||||||||| |||||    
T  660842 gttagatgatcgcaaggttctaccgctttctcttctccgactc 660884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 79 - 290
Target Start/End: Complemental strand, 23199405 - 23199194
Alignment:
Q  79 accaatttaatccacaataatcactttatacaaatatgcacttatgggtagaagtagaaaaagagattatacaaaagattatgaatgaaatctaacccta 178  Q
    ||||||| |||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  23199405 accaattaaatccacaataatcactttatacaaataggcacttatgggtagaagaagaaaaagagattatacaaaagattatgaatgaaatctaacccta 23199306  T
Q  179 atttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttag 278  Q
    |||||||||||||||||||||  |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| || |||||||||||||     
T  23199305 atttctataacatcaaaactactaacaactacaaggttaaaccatttttcagaattatacaacccattattagagaaagctagtcccacccttaccttaa 23199206  T
Q  279 gttagatgatcg 290  Q
     |||||||||||    
T  23199205 attagatgatcg 23199194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 116 - 278
Target Start/End: Original strand, 18744765 - 18744927
Alignment:
Q  116 gcacttatgggtagaagtagaaaaagagattatacaaaagattatgaatgaaatctaaccctaatttctataacatcaaaactaacaacaactacaaggt 215  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  18744765 gcacttatgggtagaagtagaaaaagagattatacaaaagattatgaatgaaatctaaccctaatttctataacatcaaaactaataacaactacaaggt 18744864  T
Q  216 taaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttag 278  Q
    |||||||||||||||||||||||||||||||||||||||||| || || ||||||||||||||    
T  18744865 taaaccctttttcagaattatacaacccattattagagaaagttagtcccacccttaccttag 18744927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 79 - 273
Target Start/End: Complemental strand, 1627266 - 1627071
Alignment:
Q  79 accaatttaatccacaataatcactttatacaaatatgcacttatgggtagaagtagaaaaagagattatacaaaagattatgaatgaaatctaacccta 178  Q
    ||||||| |||||||||||||||||||||||| |||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1627266 accaattaaatccacaataatcactttatacacatagacacttatgggtagaagtagaaaaagagattatacaaaagattatgaatgaaatctaacccta 1627167  T
Q  179 atttctataacatcaaaactaacaacaactacaaggttaaaccct-ttttcagaattatacaacccattattagagaaagctattcacacccttac 273  Q
    ||||||||||||||||||||||||| || ||||||| |||||||| |||| ||||||||||||| |||||||||||||||||| || |||||||||    
T  1627166 atttctataacatcaaaactaacaataaatacaagggtaaaccctttttttagaattatacaactcattattagagaaagctagtcccacccttac 1627071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 175 - 278
Target Start/End: Original strand, 16063701 - 16063804
Alignment:
Q  175 cctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttacc 274  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || || ||||||||||    
T  16063701 cctaattcctataacatcaaaactaacaacaactacaaggttaaacccttttttagaattatacaacccattattagagaaaggtagtcccacccttacc 16063800  T
Q  275 ttag 278  Q
    ||||    
T  16063801 ttag 16063804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 175 - 278
Target Start/End: Complemental strand, 6551392 - 6551289
Alignment:
Q  175 cctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttacc 274  Q
    ||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||  |  ||||||||||| || || ||||||||||    
T  6551392 cctaattcctataacatcaaatctaacaacaactacaaggttaaaccctttttcagaattatacaacttagaattagagaaagttagtctcacccttacc 6551293  T
Q  275 ttag 278  Q
    ||||    
T  6551292 ttag 6551289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 171 - 290
Target Start/End: Complemental strand, 21398752 - 21398631
Alignment:
Q  171 taaccctaatttctataacatcaaaactaacaa--caactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacc 268  Q
    |||||||||||||||||||||||||||||||||  |||  ||| | | || ||| |||| ||||| |||||||||||||||||||||||||| || ||||    
T  21398752 taaccctaatttctataacatcaaaactaacaaaacaaaaacatgttaaaccccctttttagaatcatacaacccattattagagaaagctaatcccacc 21398653  T
Q  269 cttaccttaggttagatgatcg 290  Q
    |||||||||| |||||||||||    
T  21398652 cttaccttagattagatgatcg 21398631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 171 - 290
Target Start/End: Complemental strand, 32607423 - 32607303
Alignment:
Q  171 taaccctaatttctataacatcaaaactaacaacaactacaag--gttaaaccctttttcagaattatacaacccattattagagaaagctattcacacc 268  Q
    |||| |||||||||||||||||||||||||||| ||| ||||   ||||||||| |||| ||||| |||||||||||||||||||||||||| || ||||    
T  32607423 taactctaatttctataacatcaaaactaacaa-aacaacaacatgttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacc 32607325  T
Q  269 cttaccttaggttagatgatcg 290  Q
    |||||||||| |||||| ||||    
T  32607324 cttaccttagattagataatcg 32607303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 171 - 321
Target Start/End: Original strand, 26749978 - 26750127
Alignment:
Q  171 taaccctaatttctataacatcaaaactaac-aacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacaccc 269  Q
    ||||||||||| ||| |||||||||||| |  ||||||||||||||||||||| ||||||| |||||| | |  || |||| | || | || || |||||    
T  26749978 taaccctaatt-ctacaacatcaaaacttattaacaactacaaggttaaaccccttttcaggattatata-cttatgattaaaaaaggttagtctcaccc 26750075  T
Q  270 ttaccttaggttagatgatcgcaaggtcctaccgctttctcttctctgactc 321  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  26750076 ttaccttaggttagatgatcgcaaggttctaccgctttctcttctctaactc 26750127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 202 - 314
Target Start/End: Complemental strand, 1626992 - 1626881
Alignment:
Q  202 aacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcgcaaggtcctac 301  Q
    ||||||||||||||||||||||||||||| |||| | | |  || |||| |||| | || |||||||||||||||||||||||| |||||||||| ||||    
T  1626992 aacaactacaaggttaaaccctttttcaggattacata-cttatgattaaagaaggttagtcacacccttaccttaggttagataatcgcaaggttctac 1626894  T
Q  302 cgctttctcttct 314  Q
    |||||||||||||    
T  1626893 cgctttctcttct 1626881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 17 - 86
Target Start/End: Complemental strand, 1627456 - 1627387
Alignment:
Q  17 acatcacatgacaaaaacaacaacaatcagaagtgaattcatcaacaacaacattatactttaccaattt 86  Q
    ||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||    
T  1627456 acatctcataacaaaaacaacaacaatcagaagtgaattcatcaacaacaacattatacttcatcaattt 1627387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 30 - 86
Target Start/End: Original strand, 18744558 - 18744614
Alignment:
Q  30 aaaacaacaacaatcagaagtgaattcatcaacaacaacattatactttaccaattt 86  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  18744558 aaaacaacaacaatcagaagtgaattcatcaacaacaacattatacttcaccaattt 18744614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 172 - 321
Target Start/End: Complemental strand, 8833310 - 8833162
Alignment:
Q  172 aaccctaatttctataacatcaaaac-taacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacaccct 270  Q
    |||||||||| ||| ||||||||||| ||  |||||||| |||||||||||||||||||| |||| | | |  || |||| |||| |  | || ||||||    
T  8833310 aaccctaatt-ctacaacatcaaaacctattaacaactataaggttaaaccctttttcaggattacata-cttatgattaaagaaggtcagtcccaccct 8833213  T
Q  271 taccttaggttagatgatcgcaaggtcctaccgctttctcttctctgactc 321  Q
    |||| ||||||||||||||||||||| |||| |||||||||||||||||||    
T  8833212 taccctaggttagatgatcgcaaggttctacagctttctcttctctgactc 8833162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 202 - 314
Target Start/End: Complemental strand, 14025881 - 14025770
Alignment:
Q  202 aacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcgcaaggtcctac 301  Q
    ||||||||||||||||||||||||||||| |||| | | |  || |||| |||| | || || |||||||||||||| ||||||||||||||||| ||||    
T  14025881 aacaactacaaggttaaaccctttttcaggattacata-cttatgattaaagaaggttagtcccacccttaccttagattagatgatcgcaaggttctac 14025783  T
Q  302 cgctttctcttct 314  Q
    |||||||| ||||    
T  14025782 cgctttcttttct 14025770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 166 - 232
Target Start/End: Original strand, 21504081 - 21504147
Alignment:
Q  166 aaatctaaccctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaa 232  Q
    |||| |||||||||||||||||||||||||||||  |||||||||||  ||||||||||||||||||    
T  21504081 aaatttaaccctaatttctataacatcaaaactactaacaactacaaacttaaaccctttttcagaa 21504147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 176 - 278
Target Start/End: Original strand, 20313226 - 20313328
Alignment:
Q  176 ctaatttctataa-catcaaaa-ctaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttac 273  Q
    ||||||||| ||| |||||||| | ||||||||| || | |||||||||| ||||||||||||| |||||| |||||||| |||||| || |||||||||    
T  20313226 ctaatttctctaatcatcaaaatcaaacaacaacaaccatgttaaaccctatttcagaattata-aacccactattagag-aagctagtcccacccttac 20313323  T
Q  274 cttag 278  Q
    |||||    
T  20313324 cttag 20313328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 27 - 66
Target Start/End: Original strand, 660467 - 660506
Alignment:
Q  27 acaaaaacaacaacaatcagaagtgaattcatcaacaaca 66  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  660467 acaaaaacaacaacaatcagaagttaattcatcaacaaca 660506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 171 - 229
Target Start/End: Original strand, 24068175 - 24068234
Alignment:
Q  171 taaccctaatttctataacatcaaaac-taacaacaactacaaggttaaaccctttttca 229  Q
    |||||||||| ||| |||||||||||| ||  ||||||||||||||||||||||||||||    
T  24068175 taaccctaatctctttaacatcaaaacctattaacaactacaaggttaaaccctttttca 24068234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 173 - 239
Target Start/End: Complemental strand, 21398904 - 21398833
Alignment:
Q  173 accctaatttctataacatcaaaactaacaacaactac----aaggttaaaccc-tttttcagaattataca 239  Q
    |||||| | |||||||||||||||||||||||||| ||    |||||||||||| |||||||||||||||||    
T  21398904 accctattctctataacatcaaaactaacaacaacaacaacaaaggttaaacccttttttcagaattataca 21398833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 225 - 321
Target Start/End: Complemental strand, 21300096 - 21299993
Alignment:
Q  225 tttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatc-------gcaaggtcctaccgctttctcttctctg 317  Q
    |||||||||||||||||  |  ||||||||||| || || |||||||||||||| ||||||||||        |||| | ||||||||||||||||||||    
T  21300096 tttcagaattatacaacttaaaattagagaaagttagtcccacccttaccttagattagatgatcagactctacaagattctaccgctttctcttctctg 21299997  T
Q  318 actc 321  Q
    ||||    
T  21299996 actc 21299993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 225 - 286
Target Start/End: Original strand, 31622117 - 31622178
Alignment:
Q  225 tttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatg 286  Q
    |||||||||||||||||| |  ||||||||||| || || |||||||||||||| |||||||    
T  31622117 tttcagaattatacaacctaaaattagagaaagttaatcccacccttaccttagattagatg 31622178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 171 - 203
Target Start/End: Original strand, 22111923 - 22111955
Alignment:
Q  171 taaccctaatttctataacatcaaaactaacaa 203  Q
    |||||||||||||||||||||||||||||||||    
T  22111923 taaccctaatttctataacatcaaaactaacaa 22111955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 235
Target Start/End: Original strand, 26762350 - 26762413
Alignment:
Q  172 aaccctaatttctataacatcaaaac-taacaacaactacaaggttaaaccctttttcagaatta 235  Q
    |||||||||| ||| ||||||||||| ||  ||||||||||||||||||||||||||||| ||||    
T  26762350 aaccctaatt-ctacaacatcaaaacctattaacaactacaaggttaaaccctttttcaggatta 26762413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 229
Target Start/End: Original strand, 36315305 - 36315366
Alignment:
Q  169 tctaaccctaatttctataa-catcaaaactaacaacaactacaaggttaaaccctttttca 229  Q
    |||||||||||||||| ||| | ||||| ||||| ||||||| ||||||||||| |||||||    
T  36315305 tctaaccctaatttctctaatcctcaaacctaacgacaactataaggttaaaccatttttca 36315366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 195; Significance: 1e-106; HSPs: 39)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 79 - 321
Target Start/End: Complemental strand, 24719708 - 24719467
Alignment:
Q  79 accaatttaatccacaataatcactttatacaaatatgcacttatgggtagaagtagaaaaagagattatacaaaagattatgaatgaaatctaacccta 178  Q
    ||||||| ||||||||||| |||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||| ||    
T  24719708 accaattaaatccacaatagtcactttatacaaataggcacttatgggtagaagtagaaaaaaagattatacaaaagattatgaatgaaatttaacctta 24719609  T
Q  179 atttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttag 278  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||| |||    
T  24719608 atttctataacatcaaaactaataacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctagtc-cacccttaccatag 24719510  T
Q  279 gttagatgatcgcaaggtcctaccgctttctcttctctgactc 321  Q
    |||||||||||||||||| ||||||||||||||||||||||||    
T  24719509 gttagatgatcgcaaggttctaccgctttctcttctctgactc 24719467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 81 - 287
Target Start/End: Complemental strand, 28476930 - 28476724
Alignment:
Q  81 caatttaatccacaataatcactttatacaaatatgcacttatgggtagaagtagaaaaagagattatacaaaagattatgaatgaaatctaaccctaat 180  Q
    ||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28476930 caattaaatccacaataatcactttatacaaataggcacttatgggtagaagtagaaaaagagattatacaaaagattatgaatgaaatctaaccctaat 28476831  T
Q  181 ttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttaggt 280  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||| || |||||||||||||| |    
T  28476830 ttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaactcattattagagaaatctagtcccacccttaccttagat 28476731  T
Q  281 tagatga 287  Q
    |||||||    
T  28476730 tagatga 28476724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 117 - 288
Target Start/End: Original strand, 12710759 - 12710930
Alignment:
Q  117 cacttatgggtagaagtagaaaaagagattatacaaaagattatgaatgaaatctaaccctaatttctataacatcaaaactaacaacaactacaaggtt 216  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||    
T  12710759 cacttatgggtagaagtagaaaaagagattatacaaaagattatgaatgaaatctaaccttaatttctataacatcaaaactaacaacaactacaagatt 12710858  T
Q  217 aaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgat 288  Q
    |||||||||||||||||||||||||||| ||||||||||||||| || || | ||||||||| |||||||||    
T  12710859 aaaccctttttcagaattatacaacccaatattagagaaagctagtcccatctttaccttagattagatgat 12710930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 169 - 278
Target Start/End: Complemental strand, 38056780 - 38056671
Alignment:
Q  169 tctaaccctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacc 268  Q
    ||||| ||||||| | | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| || ||||    
T  38056780 tctaaacctaattcccaaaacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattactagagaaagctagtcccacc 38056681  T
Q  269 cttaccttag 278  Q
    ||||||||||    
T  38056680 cttaccttag 38056671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 194 - 278
Target Start/End: Original strand, 50544841 - 50544925
Alignment:
Q  194 aaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttag 278  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||    
T  50544841 aaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctagtctcacccttaccttag 50544925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 172 - 290
Target Start/End: Complemental strand, 24007330 - 24007212
Alignment:
Q  172 aaccctaatttctataacatcaaaactaacaacaactac-aaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacaccct 270  Q
    ||||||||| ||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||  |||||| ||||||||||| || ||||||    
T  24007330 aaccctaatctctataacatcaaaactaacaacaactacaaaggttaaaccttttttcagaattatacaa-tcattatcagagaaagctagtcccaccct 24007232  T
Q  271 taccttaggttagatgatcg 290  Q
    ||||||||  ||||||||||    
T  24007231 taccttagtatagatgatcg 24007212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 169 - 279
Target Start/End: Complemental strand, 8276097 - 8275987
Alignment:
Q  169 tctaaccctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacc 268  Q
    ||||| ||||||| | | |||||||||| || |||||||||||||||||||||||||||||||||||||| || |||||||||| ||||||| |||||||    
T  8276097 tctaaacctaattcccaaaacatcaaaaatatcaacaactacaaggttaaaccctttttcagaattataccactcattattagataaagctagtcacacc 8275998  T
Q  269 cttaccttagg 279  Q
    |||||||||||    
T  8275997 cttaccttagg 8275987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 172 - 290
Target Start/End: Original strand, 8306552 - 8306671
Alignment:
Q  172 aaccctaatttctataacatcaaaactaacaacaactacaag--gttaaaccctttttcagaattatacaacccattattagagaaagctattcacaccc 269  Q
    |||||||||||||||||||||||||||||||| ||| ||||   ||||||||| |||| |||||||||||||||||||||||||||||||| || ||| |    
T  8306552 aaccctaatttctataacatcaaaactaacaa-aacgacaacatgttaaacccctttttagaattatacaacccattattagagaaagctagtcccactc 8306650  T
Q  270 ttaccttaggttagatgatcg 290  Q
    ||||||||| |||||||||||    
T  8306651 ttaccttagattagatgatcg 8306671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 191 - 277
Target Start/End: Complemental strand, 22145752 - 22145666
Alignment:
Q  191 tcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttacctta 277  Q
    ||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || || |||||||||||||    
T  22145752 tcaaacctaacaacaactacaaggttaaaccctttttcagaattaaacaacccattattagagaaagttagtcccacccttacctta 22145666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 171 - 278
Target Start/End: Original strand, 34392713 - 34392821
Alignment:
Q  171 taaccctaatttctataacatcaaaactaacaacaactacaag--gttaaaccctttttcagaattatacaacccattattagagaaagctattcacacc 268  Q
    ||||||||||||||||||||||||||||||||| ||| ||||   ||||||||| |||| ||||| |||||||||||||||||||||||||| |||||||    
T  34392713 taaccctaatttctataacatcaaaactaacaa-aacaacaacatgttaaacccctttttagaatcatacaacccattattagagaaagctagtcacacc 34392811  T
Q  269 cttaccttag 278  Q
    ||||||||||    
T  34392812 cttaccttag 34392821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 202 - 321
Target Start/End: Complemental strand, 14792637 - 14792519
Alignment:
Q  202 aacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcgcaaggtcctac 301  Q
    ||||||||||||||||||||||||||||| |||| | | |  || |||| |||| | || || |||||||||||||||||||||||||||||||| ||||    
T  14792637 aacaactacaaggttaaaccctttttcaggattacata-cttatgattaaagaaggttagtcccacccttaccttaggttagatgatcgcaaggttctac 14792539  T
Q  302 cgctttctcttctctgactc 321  Q
    ||||||||||||||||||||    
T  14792538 cgctttctcttctctgactc 14792519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 214 - 288
Target Start/End: Complemental strand, 17901857 - 17901783
Alignment:
Q  214 gttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgat 288  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||  ||||||||    
T  17901857 gttaaaccctttttcagaattatacaacccattattagagaaagctagtctcacccttaccttagaatagatgat 17901783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 181 - 316
Target Start/End: Original strand, 18121559 - 18121694
Alignment:
Q  181 ttctataacatcaaaac-taacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttagg 279  Q
    ||||| ||||||||||| ||  |||||||||||||||||| |||||||||| |||| | | |  || |||| |||| | || || |||||||||||||||    
T  18121559 ttctacaacatcaaaacctattaacaactacaaggttaaatcctttttcaggattacata-cttatgattaaagaaggttaatcccacccttaccttagg 18121657  T
Q  280 ttagatgatcgcaaggtcctaccgctttctcttctct 316  Q
    ||||||||||||||||| |||||||||||||||||||    
T  18121658 ttagatgatcgcaaggttctaccgctttctcttctct 18121694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 27 - 86
Target Start/End: Complemental strand, 28477112 - 28477053
Alignment:
Q  27 acaaaaacaacaacaatcagaagtgaattcatcaacaacaacattatactttaccaattt 86  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  28477112 acaaaaacaacaacaatcagaagtgaattcatcaacaacaacattatacttcaccaattt 28477053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 171 - 290
Target Start/End: Original strand, 20588581 - 20588703
Alignment:
Q  171 taaccctaatttctataacatcaaaactaacaacaactacaag--gttaaaccctttttc--agaattatacaacccattattagagaaagctattcaca 266  Q
    ||||||||||||||||||||||||||||||||| ||| | ||   ||||||||||||||   ||||| |||||||||||||||||||||||||| || ||    
T  20588581 taaccctaatttctataacatcaaaactaacaa-aacaaaaacatgttaaacccttttttttagaatcatacaacccattattagagaaagctaatccca 20588679  T
Q  267 cccttaccttaggttagatgatcg 290  Q
    |||||||||||  || ||||||||    
T  20588680 cccttaccttaaattggatgatcg 20588703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 171 - 290
Target Start/End: Original strand, 20593119 - 20593241
Alignment:
Q  171 taaccctaatttctataacatcaaaactaacaacaactacaag--gttaaaccctttttc--agaattatacaacccattattagagaaagctattcaca 266  Q
    ||||||||||||||||||||||||||||||||| ||| | ||   ||||||||||||||   ||||| |||||||||||||||||||||||||| || ||    
T  20593119 taaccctaatttctataacatcaaaactaacaa-aacaaaaacatgttaaacccttttttttagaatcatacaacccattattagagaaagctaatccca 20593217  T
Q  267 cccttaccttaggttagatgatcg 290  Q
    |||||||||||  || ||||||||    
T  20593218 cccttaccttaaattggatgatcg 20593241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 172 - 237
Target Start/End: Original strand, 39061268 - 39061333
Alignment:
Q  172 aaccctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattata 237  Q
    |||||||| ||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||    
T  39061268 aaccctaaattctataacatcaaaactatcaacaactacaaggttaaaccttttttcagaattata 39061333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 171 - 288
Target Start/End: Original strand, 45499487 - 45499605
Alignment:
Q  171 taaccctaatttctataacatcaaaactaacaacaactacaag--gttaaaccctttttcagaattatacaacccattattagagaaagctattcacacc 268  Q
    ||||||||||||||||||| | ||||||||||| ||| ||||   ||||||||| |||  ||||| |||||||||||||||||||||||||| || ||||    
T  45499487 taaccctaatttctataacgttaaaactaacaa-aacaacaacatgttaaacccctttatagaatcatacaacccattattagagaaagctagtctcacc 45499585  T
Q  269 cttaccttaggttagatgat 288  Q
    |||||||||| ||| |||||    
T  45499586 cttaccttagattatatgat 45499605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 199 - 288
Target Start/End: Original strand, 6834150 - 6834239
Alignment:
Q  199 aacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgat 288  Q
    ||||||||| || | |||||||||||||||||||||||||||| |||||||||||||||||| |  ||||||| ||||||  ||||||||    
T  6834150 aacaacaacaaccatgttaaaccctttttcagaattatacaactcattattagagaaagctagtatcacccttgccttagaatagatgat 6834239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 202 - 321
Target Start/End: Original strand, 44892427 - 44892545
Alignment:
Q  202 aacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcgcaaggtcctac 301  Q
    |||||||||||||||||| |||||||||  |||| | | |  || |||| |||| | || || |||||||| ||||||||||||||||||||||| ||||    
T  44892427 aacaactacaaggttaaatcctttttcaagattacata-cttatgattaaagaaggttagtcccacccttaacttaggttagatgatcgcaaggttctac 44892525  T
Q  302 cgctttctcttctctgactc 321  Q
    |||||||||||||| |||||    
T  44892526 cgctttctcttctccgactc 44892545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 217 - 278
Target Start/End: Complemental strand, 635064 - 635003
Alignment:
Q  217 aaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttag 278  Q
    ||||||||||| |||||||||||||| ||||||||||||||||| || ||||||||||||||    
T  635064 aaacccttttttagaattatacaacctattattagagaaagctagtctcacccttaccttag 635003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 172 - 315
Target Start/End: Complemental strand, 38887191 - 38887049
Alignment:
Q  172 aaccctaatttctataacatcaaaac-taacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacaccct 270  Q
    |||||||||| ||| ||||||||||| ||  |||||||||||| |||||||||||||||| |||| | | |  || |||| |||| | || |  ||||||    
T  38887191 aaccctaatt-ctacaacatcaaaacctattaacaactacaagattaaaccctttttcaggattacata-cttatgattaaagaaggttagtttcaccct 38887094  T
Q  271 taccttaggttagatgatcgcaaggtcctaccgctttctcttctc 315  Q
    ||||||||||||||||||| |||| | ||||||||||||||||||    
T  38887093 taccttaggttagatgatcacaagtttctaccgctttctcttctc 38887049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 214 - 288
Target Start/End: Original strand, 35895088 - 35895162
Alignment:
Q  214 gttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgat 288  Q
    |||||| ||||||||||||| |||||||||||||||||| ||||||| ||  |||| |||||||| |||||||||    
T  35895088 gttaaaacctttttcagaatcatacaacccattattagataaagctagtcctacccataccttagattagatgat 35895162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 225 - 316
Target Start/End: Complemental strand, 24723403 - 24723312
Alignment:
Q  225 tttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcgcaaggtcctaccgctttctcttctct 316  Q
    ||||||||| |||||||  |  ||||||||||| || || |||||||||||||| ||   |||||||||||| |||||||||||||||||||    
T  24723403 tttcagaatcatacaacttagaattagagaaagttagtcccacccttaccttagattgattgatcgcaaggttctaccgctttctcttctct 24723312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 225 - 317
Target Start/End: Original strand, 51324504 - 51324596
Alignment:
Q  225 tttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcgcaaggtcctaccgctttctcttctctg 317  Q
    ||||||||| |||||||  |  ||||| ||||| || || |||||||||||||| ||   |||||||||||| ||||||||||||||||||||    
T  51324504 tttcagaatcatacaacttagaattagggaaagttagtctcacccttaccttagattgattgatcgcaaggttctaccgctttctcttctctg 51324596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 172 - 287
Target Start/End: Complemental strand, 20708163 - 20708049
Alignment:
Q  172 aaccctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacaccctt 271  Q
    ||||||||||||| |||||||| || || |||||||  ||| ||||| |||||||||||||||||| ||| || | ||| |||| | || || |||||||    
T  20708163 aaccctaatttctttaacatcacaattatcaacaacatcaaagttaacccctttttcagaattatagaactca-tgttaaagaaggttagtcccaccctt 20708065  T
Q  272 accttaggttagatga 287  Q
    ||||||| || |||||    
T  20708064 accttagattggatga 20708049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 171 - 229
Target Start/End: Original strand, 40390096 - 40390155
Alignment:
Q  171 taaccctaatttctataacatcaaaac-taacaacaactacaaggttaaaccctttttca 229  Q
    |||||||||| ||| |||||||||||| ||  ||||||||||||||||||||||||||||    
T  40390096 taaccctaatatctttaacatcaaaacctattaacaactacaaggttaaaccctttttca 40390155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 175 - 237
Target Start/End: Complemental strand, 21188135 - 21188073
Alignment:
Q  175 cctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattata 237  Q
    ||||| ||||||||||||||||||| ||||||||||||  ||||| ||||| ||| |||||||    
T  21188135 cctaacttctataacatcaaaactatcaacaactacaaaattaaatcctttctcaaaattata 21188073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 169 - 229
Target Start/End: Complemental strand, 14294919 - 14294858
Alignment:
Q  169 tctaaccctaatttctataa-catcaaaactaacaacaactacaaggttaaaccctttttca 229  Q
    |||||||||||||||| ||| | ||||| ||||| ||||||||||||||||||| |||||||    
T  14294919 tctaaccctaatttctctaatcctcaaacctaacgacaactacaaggttaaaccatttttca 14294858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 120 - 176
Target Start/End: Complemental strand, 41931202 - 41931146
Alignment:
Q  120 ttatgggtagaagtagaaaaagagattatacaa-aagattatgaatgaaatctaaccc 176  Q
    |||||||||||| ||||||| |||||||||||| |||||||||||||||| |||||||    
T  41931202 ttatgggtagaaatagaaaa-gagattatacaagaagattatgaatgaaaactaaccc 41931146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 169 - 229
Target Start/End: Original strand, 51131317 - 51131378
Alignment:
Q  169 tctaaccctaatttctataa-catcaaaactaacaacaactacaaggttaaaccctttttca 229  Q
    |||||||||||||||| ||| | ||||| ||||| ||||||||||||||||||| |||||||    
T  51131317 tctaaccctaatttctctaatcctcaaacctaacgacaactacaaggttaaaccatttttca 51131378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 214 - 277
Target Start/End: Original strand, 16401902 - 16401963
Alignment:
Q  214 gttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttacctta 277  Q
    |||||||||| ||||||||||||| ||||||||||||||| ||| || || |||||||||||||    
T  16401902 gttaaaccctatttcagaattata-aacccattattagag-aagttagtcccacccttacctta 16401963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 52 - 86
Target Start/End: Original strand, 20822729 - 20822763
Alignment:
Q  52 aattcatcaacaacaacattatactttaccaattt 86  Q
    |||||||||||||||||||||||||| ||||||||    
T  20822729 aattcatcaacaacaacattatacttcaccaattt 20822763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 290
Target Start/End: Complemental strand, 16058366 - 16058301
Alignment:
Q  225 tttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcg 290  Q
    |||||||||||||||||  |  ||||||||||  || || |||||||||||||| |||||||||||    
T  16058366 tttcagaattatacaacttagaattagagaaatttagtcccacccttaccttagattagatgatcg 16058301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 290
Target Start/End: Original strand, 19676711 - 19676776
Alignment:
Q  225 tttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcg 290  Q
    |||||||||||||||||  |  ||||||||||| || || |||||||||||||  |||||||||||    
T  19676711 tttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcg 19676776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 290
Target Start/End: Complemental strand, 21046101 - 21046036
Alignment:
Q  225 tttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcg 290  Q
    |||||||||||||||||  |  ||||||||||| || || |||||||||||||  |||||||||||    
T  21046101 tttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcg 21046036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 321
Target Start/End: Original strand, 21168937 - 21169030
Alignment:
Q  229 agaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcgcaaggtcctac-cgctttctcttctctgactc 321  Q
    |||||||||||||| |  ||||||||||| || |  |||||||||||||| || | ||||  |||||| ||||  |||||||||||||||||||    
T  21168937 agaattatacaacctaaaattagagaaagttaattccacccttaccttagattggttgattacaaggttctacgagctttctcttctctgactc 21169030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 202 - 235
Target Start/End: Complemental strand, 21243832 - 21243799
Alignment:
Q  202 aacaactacaaggttaaaccctttttcagaatta 235  Q
    ||||||||||||||||||||||||||||| ||||    
T  21243832 aacaactacaaggttaaaccctttttcaggatta 21243799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 32 - 60
Target Start/End: Original strand, 20822698 - 20822726
Alignment:
Q  32 aacaacaacaatcagaagtgaattcatca 60  Q
    |||||||||||||||||||||||||||||    
T  20822698 aacaacaacaatcagaagtgaattcatca 20822726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0878 (Bit Score: 174; Significance: 1e-93; HSPs: 2)
Name: scaffold0878
Description:

Target: scaffold0878; HSP #1
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 79 - 288
Target Start/End: Complemental strand, 3620 - 3411
Alignment:
Q  79 accaatttaatccacaataatcactttatacaaatatgcacttatgggtagaagtagaaaaagagattatacaaaagattatgaatgaaatctaacccta 178  Q
    ||||||| ||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  3620 accaattaaatcctcaataatcactttatacaaataagcacttatgggtagaagtagaaaaagagattatacaaaagattatgaatgaaatataacccta 3521  T
Q  179 atttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttag 278  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| || ||||||||||||||    
T  3520 atttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaatcatacaacgcattattagagaaagctagtcccacccttaccttag 3421  T
Q  279 gttagatgat 288  Q
     |||||||||    
T  3420 attagatgat 3411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0878; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 17 - 86
Target Start/End: Complemental strand, 3810 - 3741
Alignment:
Q  17 acatcacatgacaaaaacaacaacaatcagaagtgaattcatcaacaacaacattatactttaccaattt 86  Q
    ||||| ||| ||||||| |||||||||||||||||||||||||||||||||||||||| || ||||||||    
T  3810 acatctcataacaaaaataacaacaatcagaagtgaattcatcaacaacaacattatagttcaccaattt 3741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 168; Significance: 5e-90; HSPs: 20)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 168; E-Value: 5e-90
Query Start/End: Original strand, 79 - 278
Target Start/End: Complemental strand, 21315674 - 21315475
Alignment:
Q  79 accaatttaatccacaataatcactttatacaaatatgcacttatgggtagaagtagaaaaagagattatacaaaagattatgaatgaaatctaacccta 178  Q
    ||||||| ||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||    
T  21315674 accaattaaatccacaataatcactttatacaaatagacacttatgggtagaagtagaaaaagagattatacaaaagattatgaatgaaatctaacaata 21315575  T
Q  179 atttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttag 278  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||    
T  21315574 atttctataacatcaaaactaataacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctagtcccacccttaccttag 21315475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 168; E-Value: 5e-90
Query Start/End: Original strand, 79 - 278
Target Start/End: Complemental strand, 21335464 - 21335265
Alignment:
Q  79 accaatttaatccacaataatcactttatacaaatatgcacttatgggtagaagtagaaaaagagattatacaaaagattatgaatgaaatctaacccta 178  Q
    ||||||| |||| |||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  21335464 accaattaaatctacaataatcactttatacaaatagacacttatgggtagaagtagaaaaagagattatacaaaagattatgaatgaaatctaaccata 21335365  T
Q  179 atttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttag 278  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||    
T  21335364 atttctataacatcaaaactaataacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctagtcccacccttaccttag 21335265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 161; E-Value: 7e-86
Query Start/End: Original strand, 79 - 316
Target Start/End: Original strand, 23610474 - 23610717
Alignment:
Q  79 accaatttaatccacaataatcactttatacaaatatgcacttatgggtagaagtagaaaaagaga------ttatacaaaagattatgaatgaaatcta 172  Q
    ||||||| ||| |||||||||||||||||||||||| ||||||||||||||||||||||||| | |      |||||||||||||||||||| |||||||    
T  23610474 accaattaaattcacaataatcactttatacaaataggcacttatgggtagaagtagaaaaacataatcactttatacaaaagattatgaattaaatcta 23610573  T
Q  173 accctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacaccctta 272  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||| || ||||||||    
T  23610574 accctaatttctataacatcaaaacaaacaacaactagaaggttaaaccatttttcataattatacaacccattattagagaaagctagtcccaccctta 23610673  T
Q  273 ccttaggttagatgatcgcaaggtcctaccgctttctcttctct 316  Q
    |||||||||||||| ||||||||| |||||| ||||||||||||    
T  23610674 ccttaggttagatgttcgcaaggttctaccgttttctcttctct 23610717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 79 - 290
Target Start/End: Original strand, 21369147 - 21369358
Alignment:
Q  79 accaatttaatccacaataatcactttatacaaatatgcacttatgggtagaagtagaaaaagagattatacaaaagattatgaatgaaatctaacccta 178  Q
    ||||||| ||||||||||||||||||||||||||||  || |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  21369147 accaattaaatccacaataatcactttatacaaatagacatttatgggtagtagtagaaaaagagattatacaaaagattatgaatgaaatctaacccta 21369246  T
Q  179 atttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttag 278  Q
    |||||||||||||||||||||| |  |||||||||||||||||||||||||||||||||||||||||| ||||||||||||  || ||||||||||||||    
T  21369247 atttctataacatcaaaactaatataaactacaaggttaaaccctttttcagaattatacaacccattgttagagaaagcttgtcccacccttaccttag 21369346  T
Q  279 gttagatgatcg 290  Q
     |||||||||||    
T  21369347 attagatgatcg 21369358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 172 - 321
Target Start/End: Complemental strand, 149610 - 149450
Alignment:
Q  172 aaccctaatttctataacatcaaaactaacaacaactacaag--gttaaaccc---tttttcagaattatacaacccattattagagaaagctattcaca 266  Q
    |||||||||||||||||||||||||||||||| ||| ||||   |||||||||   ||||| ||||||||||||| |||||||||||||||||| |  ||    
T  149610 aaccctaatttctataacatcaaaactaacaa-aacgacaacatgttaaaccccttttttttagaattatacaactcattattagagaaagctagttcca 149512  T
Q  267 cccttaccttaggttagatgatcg-------caaggtcctaccgctttctcttctctgactc 321  Q
    |||||||||||| |||||||||||       |||| | ||||||||||||||||||||||||    
T  149511 cccttaccttagattagatgatcggactctacaagattctaccgctttctcttctctgactc 149450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 225 - 321
Target Start/End: Complemental strand, 19201252 - 19201156
Alignment:
Q  225 tttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcgcaaggtcctaccgctttctcttctctgactc 321  Q
    |||||||||||||||||  |  ||||||||||| || || |||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  19201252 tttcagaattatacaacttagaattagagaaagttagtctcacccttaacttaggttagatgatcgcaaggttctaccgctttctcttctctgactc 19201156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 167 - 235
Target Start/End: Complemental strand, 28652662 - 28652593
Alignment:
Q  167 aatctaaccctaatttctataacatcaaaactaacaacaactac-aaggttaaaccctttttcagaatta 235  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||    
T  28652662 aatctaaccctaatttctataacatcaaaactaacaacaactacaaaggctaaaccctttttcagaatta 28652593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 171 - 278
Target Start/End: Complemental strand, 28345092 - 28344987
Alignment:
Q  171 taaccctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacaccct 270  Q
    |||||||||||||||||||||| |||||||||| ||| ||| | |||||||| |||| ||||| ||||| |||||||||||||||||||| |||||||||    
T  28345092 taaccctaatttctataacatcgaaactaacaa-aacaacatg-ttaaacccctttttagaatcatacagcccattattagagaaagctagtcacaccct 28344995  T
Q  271 taccttag 278  Q
    || |||||    
T  28344994 tatcttag 28344987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 214 - 288
Target Start/End: Original strand, 23801485 - 23801559
Alignment:
Q  214 gttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgat 288  Q
    ||||||||| |||| ||||| |||||||||||||||||||||||||| || |||||||||||||| |||||||||    
T  23801485 gttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttaccttagattagatgat 23801559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 172 - 237
Target Start/End: Complemental strand, 25584367 - 25584302
Alignment:
Q  172 aaccctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattata 237  Q
    |||||||| ||||||||||||||||||| || |||| |||||||||||||||||||||||||||||    
T  25584367 aaccctaacttctataacatcaaaactatcatcaacgacaaggttaaaccctttttcagaattata 25584302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 171 - 278
Target Start/End: Complemental strand, 34491350 - 34491239
Alignment:
Q  171 taaccctaatttctataacatcaaaacta----acaacaactacaaggttaaaccctttttcagaattatacaacccatta-ttagagaaagctattcac 265  Q
    ||||||||| || ||||||||||||||||    |||||||| || | |||||||||||||||||||||||||||| | ||| |||||| |||||| || |    
T  34491350 taaccctaaattttataacatcaaaactacaaaacaacaacaaccatgttaaaccctttttcagaattatacaactcgttatttagag-aagctagtccc 34491252  T
Q  266 acccttaccttag 278  Q
    |||||||||||||    
T  34491251 acccttaccttag 34491239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 171 - 237
Target Start/End: Original strand, 19647180 - 19647246
Alignment:
Q  171 taaccctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattata 237  Q
    ||||||||| |||||||  ||||||||||  |||||||||||| |||||||||||||||||||||||    
T  19647180 taaccctaacttctatacaatcaaaactattaacaactacaagattaaaccctttttcagaattata 19647246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 175 - 278
Target Start/End: Complemental strand, 20006072 - 20005970
Alignment:
Q  175 cctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttacc 274  Q
    ||||| |||||||||||||||| ||  |||||| ||||  |||||||||||||||||||||||  || ||| |||| |||| |||| || ||||||||||    
T  20006072 cctaacttctataacatcaaaattattaacaacaacaaaattaaaccctttttcagaattata-gactcatgattaaagaaggctagtcccacccttacc 20005974  T
Q  275 ttag 278  Q
    ||||    
T  20005973 ttag 20005970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 175 - 237
Target Start/End: Original strand, 45535876 - 45535938
Alignment:
Q  175 cctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattata 237  Q
    ||||| |||||||||| || || || ||||||| ||||| |||||||||||||||||||||||    
T  45535876 cctaacttctataacaacagaattatcaacaacaacaagattaaaccctttttcagaattata 45535938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 225 - 290
Target Start/End: Original strand, 17307486 - 17307551
Alignment:
Q  225 tttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcg 290  Q
    |||||||||||||||||  |  ||||||||||| || || |||||||||||||| |||||||||||    
T  17307486 tttcagaattatacaacttagaattagagaaagttagtcccacccttaccttagattagatgatcg 17307551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 171 - 203
Target Start/End: Complemental strand, 25584218 - 25584186
Alignment:
Q  171 taaccctaatttctataacatcaaaactaacaa 203  Q
    |||||||||||||||||||||||||||||||||    
T  25584218 taaccctaatttctataacatcaaaactaacaa 25584186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 176 - 278
Target Start/End: Complemental strand, 36734552 - 36734450
Alignment:
Q  176 ctaatttctataa-catcaaaa-ctaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttac 273  Q
    ||||||||| ||| |||||||| | ||||||||| || | |||||||||| ||| ||||||||| ||||||||||||||| ||| || || |||||||||    
T  36734552 ctaatttctctaatcatcaaaatcaaacaacaacaaccatgttaaaccctattttagaattata-aacccattattagag-aagttaatcccacccttac 36734455  T
Q  274 cttag 278  Q
    |||||    
T  36734454 cttag 36734450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 265 - 316
Target Start/End: Complemental strand, 18388202 - 18388151
Alignment:
Q  265 cacccttaccttaggttagatgatcgcaaggtcctaccgctttctcttctct 316  Q
    |||||||||||||| ||   |||||||||||| |||||||||||||||||||    
T  18388202 cacccttaccttagattgattgatcgcaaggttctaccgctttctcttctct 18388151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 290
Target Start/End: Complemental strand, 24780892 - 24780827
Alignment:
Q  225 tttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcg 290  Q
    |||||||||||||||||  |  ||||||||||| || || |||||||||||||  |||||||||||    
T  24780892 tttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcg 24780827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 61
Target Start/End: Original strand, 29114431 - 29114460
Alignment:
Q  32 aacaacaacaatcagaagtgaattcatcaa 61  Q
    ||||||||||||||||||||||||||||||    
T  29114431 aacaacaacaatcagaagtgaattcatcaa 29114460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 167; Significance: 2e-89; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 79 - 292
Target Start/End: Complemental strand, 20410708 - 20410497
Alignment:
Q  79 accaatttaatccacaataatcactttatacaaatatgcacttatgggtagaagtagaaaaagagattatacaaaagattatgaatgaaatctaacccta 178  Q
    ||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  20410708 accaattaaatccacaataatcactttatacaaataggcacttatgggtagaagtagaaaaagagattatacaaaagattatgaatgagatctaacccta 20410609  T
Q  179 atttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttag 278  Q
    ||||||||  |||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||  |||||||||||||     
T  20410608 atttctat--catcaaaactaataacaactacaaggttaaatcctttttcagaattatacaacccattattagagaaagctatttccacccttaccttaa 20410511  T
Q  279 gttagatgatcgca 292  Q
     |||||||||||||    
T  20410510 attagatgatcgca 20410497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 17 - 180
Target Start/End: Complemental strand, 21686321 - 21686158
Alignment:
Q  17 acatcacatgacaaaaacaacaacaatcagaagtgaattcatcaacaacaacattatactttaccaatttaatccacaataatcactttatacaaatatg 116  Q
    ||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |    
T  21686321 acatcgcataacaaaaacaacaacaatcagaagtgaattcatcaacaacaacattatacttcaccaatttaatccacaataatcactttatacaaatagg 21686222  T
Q  117 cacttatgggtagaagtagaaaaagagattatacaaaagattatgaatgaaatctaaccctaat 180  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21686221 cacttatgggtagaagtagaaaaagagattatacaaaagattatgaatgaaatctaaccctaat 21686158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 180 - 321
Target Start/End: Complemental strand, 21683171 - 21683031
Alignment:
Q  180 tttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttagg 279  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| || |||||||||||||||    
T  21683171 tttctataacatcaaaacta-caacaactacaaggttaaaccctttttctgaattatacaacccattattagagaaagctagtcccacccttaccttagg 21683073  T
Q  280 ttagatgatcgcaaggtcctaccgctttctcttctctgactc 321  Q
    |||||||||||||||||||||| |||||||||||||||||||    
T  21683072 ttagatgatcgcaaggtcctacagctttctcttctctgactc 21683031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 142 - 279
Target Start/End: Original strand, 15998806 - 15998943
Alignment:
Q  142 agattatacaaaagattatgaatgaaatctaaccctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaac 241  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  15998806 agattatacaaaagattatcaatgaaatctaaccctaatttctataacatcaaaactaacaacaactacaaggttaaactctttttcagaattatacaac 15998905  T
Q  242 ccattattagagaaagctattcacacccttaccttagg 279  Q
      |  ||||||||||| || || |||||||||||||||    
T  15998906 ttagaattagagaaagttagtctcacccttaccttagg 15998943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 187 - 290
Target Start/End: Complemental strand, 19825576 - 19825473
Alignment:
Q  187 aacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatg 286  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||| || |||||||||||||| |||||||    
T  19825576 aacatcaaaactaacaacaactacaaggttaaaacctttttcagaattatgcaacccattattagagaaagctagtctcacccttaccttagattagatg 19825477  T
Q  287 atcg 290  Q
    ||||    
T  19825476 atcg 19825473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 169 - 321
Target Start/End: Original strand, 18982515 - 18982669
Alignment:
Q  169 tctaaccctaatttctataa-catcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacac 267  Q
    |||||||||||||||| ||| ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| || || |||    
T  18982515 tctaaccctaatttctctaatcatcaaacctagcaacaactacaaggttaaaccctttttcagaattatacaacccattattagataaagttaatcccac 18982614  T
Q  268 ccttaccttaggttagatgatcgcaaggtcctac-cgctttctcttctctgactc 321  Q
    | ||||||||| ||   ||||  |||||| ||||  |||||||||||||||||||    
T  18982615 cgttaccttagattgattgattacaaggttctacaagctttctcttctctgactc 18982669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 171 - 288
Target Start/End: Original strand, 10446162 - 10446280
Alignment:
Q  171 taaccctaatttctataacatcaaaactaacaacaactacaag--gttaaaccctttttcagaattatacaacccattattagagaaagctattcacacc 268  Q
    |||||||||||||||||||||| |||||||||| ||| ||||   ||||||||| |||| ||||| |||||||||||||||||||||||||| || ||||    
T  10446162 taaccctaatttctataacatcgaaactaacaa-aacaacaacatgttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacc 10446260  T
Q  269 cttaccttaggttagatgat 288  Q
    |||||||||| |||||||||    
T  10446261 cttaccttagattagatgat 10446280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 181 - 278
Target Start/End: Original strand, 23658044 - 23658142
Alignment:
Q  181 ttctataacatcaaaac-taacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttag 278  Q
    ||||| ||||||||||| ||  ||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| || ||||||||||||||    
T  23658044 ttctacaacatcaaaacctattaacaactacaaggttaaaccctttttcagaattatacaacctattattagggaaagctagtcccacccttaccttag 23658142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 172 - 321
Target Start/End: Complemental strand, 7217347 - 7217200
Alignment:
Q  172 aaccctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacaccctt 271  Q
    |||||||||| ||| ||||||||| |||  ||||||||||||||||||||||||||||| |||| | | |  || |||| |||| | || || |||||||    
T  7217347 aaccctaatt-ctacaacatcaaacctattaacaactacaaggttaaaccctttttcaggattacata-cttatgattaaagaaggttagtctcaccctt 7217250  T
Q  272 accttaggttagatgatcgcaaggtcctaccgctttctcttctctgactc 321  Q
    |||||||| |||||||||||||||| ||||||||||||||| ||||||||    
T  7217249 accttaggctagatgatcgcaaggttctaccgctttctcttttctgactc 7217200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 177 - 288
Target Start/End: Complemental strand, 34140554 - 34140445
Alignment:
Q  177 taatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttacctt 276  Q
    ||||| ||||||||||||||||||||||||||||||| |||||||   ||||| ||||||| ||||||||||||||| |||||| || ||||||||||||    
T  34140554 taattcctataacatcaaaactaacaacaactacaagattaaaccagatttcaaaattata-aacccattattagag-aagctagtcccacccttacctt 34140457  T
Q  277 aggttagatgat 288  Q
    || |||||||||    
T  34140456 agattagatgat 34140445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 177 - 288
Target Start/End: Complemental strand, 34153170 - 34153061
Alignment:
Q  177 taatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttacctt 276  Q
    ||||| ||||||||||||||||||||||||||||||| ||||| |   ||||| ||||||| ||||||||||||||| |||||| || ||||||||||||    
T  34153170 taattcctataacatcaaaactaacaacaactacaagattaaaacagatttcaaaattata-aacccattattagag-aagctagtcccacccttacctt 34153073  T
Q  277 aggttagatgat 288  Q
    || |||||||||    
T  34153072 agattagatgat 34153061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 214 - 288
Target Start/End: Original strand, 29045260 - 29045334
Alignment:
Q  214 gttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgat 288  Q
    |||||||||||||||| |||||||||||||||||||||||||||||| || ||||||||||||||  ||||||||    
T  29045260 gttaaaccctttttcaaaattatacaacccattattagagaaagctagtctcacccttaccttagaatagatgat 29045334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 181 - 321
Target Start/End: Original strand, 22557204 - 22557343
Alignment:
Q  181 ttctataacatcaaaac-taacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttagg 279  Q
    ||||| ||||||||||| ||  ||||||||||||||||||||||||||||| |||| | | |  || || | |||| | || || |||||||||||||||    
T  22557204 ttctacaacatcaaaacctattaacaactacaaggttaaaccctttttcaggattacata-cttatgataa-agaaggttactcccacccttaccttagg 22557301  T
Q  280 ttagatgatcgcaaggtcctaccgctttctcttctctgactc 321  Q
    ||||||||||||||||| |||| |||||||||||||||||||    
T  22557302 ttagatgatcgcaaggttctactgctttctcttctctgactc 22557343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 171 - 278
Target Start/End: Original strand, 1818899 - 1819005
Alignment:
Q  171 taaccctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacaccct 270  Q
    |||||||||||||||||||||||||||||  |||||||||||| |||||||||||||||||| ||||  || ||| |||| |||| | || || ||||||    
T  1818899 taaccctaatttctataacatcaaaactattaacaactacaagcttaaaccctttttcagaactata-tactcatgattaaagaaggttagtctcaccct 1818997  T
Q  271 taccttag 278  Q
    ||||||||    
T  1818998 taccttag 1819005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 202 - 321
Target Start/End: Complemental strand, 18455147 - 18455029
Alignment:
Q  202 aacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcgcaaggtcctac 301  Q
    |||||||||||||||||| |||||||||| |||| | | |  || |||| |||| | || || ||||||||||||||||||||||||| |||||| ||||    
T  18455147 aacaactacaaggttaaaacctttttcaggattacata-cttatgattaaagaaggttactcccacccttaccttaggttagatgatcacaaggttctac 18455049  T
Q  302 cgctttctcttctctgactc 321  Q
    ||||||||||||||| ||||    
T  18455048 cgctttctcttctctaactc 18455029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 175 - 237
Target Start/End: Complemental strand, 24506217 - 24506155
Alignment:
Q  175 cctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattata 237  Q
    ||||| ||||||||||||||||||| ||||||||||||  |||||||||||||||||||||||    
T  24506217 cctaacttctataacatcaaaactatcaacaactacaaaattaaaccctttttcagaattata 24506155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 167 - 235
Target Start/End: Complemental strand, 25601437 - 25601371
Alignment:
Q  167 aatctaaccctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaatta 235  Q
    ||||||||||||||||||||||||| |||||||||||| ||   |||||||||||||||||||||||||    
T  25601437 aatctaaccctaatttctataacatgaaaactaacaactac--aaaggttaaaccctttttcagaatta 25601371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 18982362 - 18982422
Alignment:
Q  172 aaccctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaa 232  Q
    |||||||| ||||| | ||||||||||| ||||||||||||  ||||||||||||||||||    
T  18982362 aaccctaacttctacagcatcaaaactatcaacaactacaaaattaaaccctttttcagaa 18982422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 317
Target Start/End: Original strand, 28948575 - 28948667
Alignment:
Q  225 tttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcgcaaggtcctaccgctttctcttctctg 317  Q
    ||||||||| |||||||  |  ||||||||||| || || |||||||||||||| ||   |||||||||||| ||| |||||||| |||||||    
T  28948575 tttcagaatcatacaacttagaattagagaaagttagtctcacccttaccttagattgattgatcgcaaggttctatcgctttcttttctctg 28948667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 235
Target Start/End: Original strand, 31734655 - 31734718
Alignment:
Q  172 aaccctaatttctataacatcaaaac-taacaacaactacaaggttaaaccctttttcagaatta 235  Q
    ||||||||||| || ||||||||||| ||  ||||||| ||||||||||||||||||||||||||    
T  31734655 aaccctaattt-tacaacatcaaaacctattaacaactgcaaggttaaaccctttttcagaatta 31734718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 225 - 319
Target Start/End: Original strand, 19235123 - 19235218
Alignment:
Q  225 tttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcgcaaggtcctac-cgctttctcttctctgac 319  Q
    |||||||||||||||||| |  ||||||||||| || || |||||||| ||||| || | ||||  |||||| ||||  |||||||||||||||||    
T  19235123 tttcagaattatacaacctaaaattagagaaagttaatcccacccttaacttagattggttgattacaaggttctacaagctttctcttctctgac 19235218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 172 - 321
Target Start/End: Complemental strand, 23431551 - 23431396
Alignment:
Q  172 aaccctaatttctataacatcaaaac-taacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacaccct 270  Q
    |||||||||| ||| ||||||||||| ||  | ||||||||||||||||||||||||||| |||| |  ||  || |||| |||| | || || ||| ||    
T  23431551 aaccctaatt-ctacaacatcaaaacctattagcaactacaaggttaaaccctttttcaggattaca-tacttatgattaaagaaggttagtcccacgct 23431454  T
Q  271 taccttaggttagatgatcg-------caaggtcctaccgctttctcttctctgactc 321  Q
    |||||||| |||||||||||       |||| | ||||||||||||||||||||||||    
T  23431453 taccttagattagatgatcggactctacaagattctaccgctttctcttctctgactc 23431396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 227 - 320
Target Start/End: Complemental strand, 19167903 - 19167809
Alignment:
Q  227 tcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcgcaaggtcctac-cgctttctcttctctgact 320  Q
    |||||||||||||||| | ||||||| |||| || |  |||||||||||||| || | ||||  |||||| ||||  ||||||||||||||||||    
T  19167903 tcagaattatacaacctaatattagacaaagttaattccacccttaccttagattggttgattacaaggttctacaagctttctcttctctgact 19167809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 290
Target Start/End: Original strand, 7827972 - 7828037
Alignment:
Q  225 tttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcg 290  Q
    |||||||||||||||||  |  ||||||||||| || || |||||||||||||  |||||||||||    
T  7827972 tttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcg 7828037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 286
Target Start/End: Original strand, 13285724 - 13285809
Alignment:
Q  201 caacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatg 286  Q
    ||||||| |||| | ||||||| |||||||||||||  ||| ||| |||| |||| | || || |||||||||||||| |||||||    
T  13285724 caacaacaacaatggtaaaccccttttcagaattatgaaactcatgattatagaaggttagtcccacccttaccttagattagatg 13285809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 290
Target Start/End: Complemental strand, 19655283 - 19655218
Alignment:
Q  225 tttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcg 290  Q
    |||||||||||||||||  |  ||||||||||| || || |||||||||||||  |||||||||||    
T  19655283 tttcagaattatacaacttagaattagagaaagttagtctcacccttaccttaaattagatgatcg 19655218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 290
Target Start/End: Complemental strand, 23150339 - 23150274
Alignment:
Q  225 tttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcg 290  Q
    |||||||||||||||||  |  ||||||||||| || || |||||||||||||  |||||||||||    
T  23150339 tttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcg 23150274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 278
Target Start/End: Complemental strand, 27330033 - 27329980
Alignment:
Q  225 tttcagaattatacaacccattattagagaaagctattcacacccttaccttag 278  Q
    |||||||||||||||||| |  ||||||||||| || |||||| ||||||||||    
T  27330033 tttcagaattatacaacctagaattagagaaagttagtcacactcttaccttag 27329980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 278
Target Start/End: Complemental strand, 27390773 - 27390720
Alignment:
Q  225 tttcagaattatacaacccattattagagaaagctattcacacccttaccttag 278  Q
    |||||||||||||||||| |  ||||||||||| || |||||| ||||||||||    
T  27390773 tttcagaattatacaacctagaattagagaaagttagtcacactcttaccttag 27390720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0516 (Bit Score: 166; Significance: 8e-89; HSPs: 2)
Name: scaffold0516
Description:

Target: scaffold0516; HSP #1
Raw Score: 166; E-Value: 8e-89
Query Start/End: Original strand, 94 - 315
Target Start/End: Complemental strand, 5488 - 5267
Alignment:
Q  94 aataatcactttatacaaatatgcacttatgggtagaagtagaaaaagagattatacaaaagattatgaatgaaatctaaccctaatttctataacatca 193  Q
    ||||||||||||||||||||| |||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  5488 aataatcactttatacaaataagcacttatgggttgaagtagaaaaggagattatacaaaagattatgaatgaaatctaaccctaatatctataacatca 5389  T
Q  194 aaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcgcaa 293  Q
    |||| ||||||||||||||||||||||||||||| |||||||||||||  |  ||||||||||| || || |||||||||||||||||||||||||||||    
T  5388 aaacgaacaacaactacaaggttaaaccctttttaagaattatacaacttaaaattagagaaagttagtcccacccttaccttaggttagatgatcgcaa 5289  T
Q  294 ggtcctaccgctttctcttctc 315  Q
    ||| ||||||||||||||||||    
T  5288 ggttctaccgctttctcttctc 5267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0516; HSP #2
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 265 - 315
Target Start/End: Complemental strand, 5220 - 5170
Alignment:
Q  265 cacccttaccttaggttagatgatcgcaaggtcctaccgctttctcttctc 315  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  5220 cacccttaccttaggttagatgatcgcaaggttctaccgctttctcttctc 5170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 160; Significance: 3e-85; HSPs: 50)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 79 - 278
Target Start/End: Original strand, 14520300 - 14520499
Alignment:
Q  79 accaatttaatccacaataatcactttatacaaatatgcacttatgggtagaagtagaaaaagagattatacaaaagattatgaatgaaatctaacccta 178  Q
    ||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||    
T  14520300 accaattaaatccacaataatcactttatacaaataggcacttatgggtagaagtagaaaaagagattatacaaaagattatgagtgaaatttaacccta 14520399  T
Q  179 atttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttag 278  Q
    |||| |||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||| ||||||||| || ||||||||||||||    
T  14520400 atttttataacatcaaaactaacaacaactacaaggttaaacctttttttagaattatacaacccattattaaagaaagctagtcccacccttaccttag 14520499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 79 - 278
Target Start/End: Original strand, 17208378 - 17208577
Alignment:
Q  79 accaatttaatccacaataatcactttatacaaatatgcacttatgggtagaagtagaaaaagagattatacaaaagattatgaatgaaatctaacccta 178  Q
    ||||||| ||||||||||||||||||||||||||||  ||||||||  |||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  17208378 accaattaaatccacaataatcactttatacaaatagacacttatgaatagaagaagaaaaagagattatacaaaagattatgaatgaaatctaacccta 17208477  T
Q  179 atttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttag 278  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||| || ||||||||||||||    
T  17208478 atttctataacatcaaaactaacaacaactacaaggttaaatcctttttcagaattatacaactcattattagagaaagctagtcccacccttaccttag 17208577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 79 - 315
Target Start/End: Original strand, 24547054 - 24547290
Alignment:
Q  79 accaatttaatccacaataatcactttatacaaatatgcacttatgggtagaagtagaaaaagagattatacaaaagattatgaatgaaatctaacccta 178  Q
    ||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24547054 accaattaaatccacaataatcactttatacaaataggcacttatgggtagaagtagaaaaagagattatacaaaagattatgaatgaaatctaacccta 24547153  T
Q  179 atttctataacatcaaaactaac--aacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttacctt 276  Q
    |||||||||||||| ||||||||  |||||| || | ||||||| | |||| ||||| ||||||||||||||||||||||| || || || |||||||||    
T  24547154 atttctataacatc-aaactaacaaaacaacaac-atgttaaactcctttttagaatcatacaacccattattagagaaagatagtctcatccttacctt 24547251  T
Q  277 aggttagatgatcgcaaggtcctaccgctttctcttctc 315  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  24547252 aggttagatgatcgcaaggttctaccgctttctcttctc 24547290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 146; E-Value: 7e-77
Query Start/End: Original strand, 79 - 320
Target Start/End: Complemental strand, 24549149 - 24548911
Alignment:
Q  79 accaatttaatccacaataatcactttatacaaatatgcacttatgggtagaagtagaaaaagagattatacaaaagattatgaatgaaatctaacccta 178  Q
    ||||||| ||||||||||||| ||||||| |||||| ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||    
T  24549149 accaattaaatccacaataattactttatgcaaataggcacttatgggtagaagtagaaaaagagattgtacaaaatattatgaatgaaatctaacccta 24549050  T
Q  179 atttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttag 278  Q
    |||||||||||||| |||||||||| ||| || |  |||||||| |||| ||||| |||||||||||||||||| |||| || || ||||||||| ||||    
T  24549049 atttctataacatc-aaactaacaa-aacaac-atattaaacccctttttagaatcatacaacccattattagataaagttagtctcacccttactttag 24548953  T
Q  279 gttagatgatcgcaaggtcctaccgctttctcttctctgact 320  Q
    |||||||||||||||||| |||||||||||||||||||||||    
T  24548952 gttagatgatcgcaaggttctaccgctttctcttctctgact 24548911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 169 - 290
Target Start/End: Complemental strand, 14641656 - 14641535
Alignment:
Q  169 tctaaccctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacc 268  Q
    ||||| ||||||| | | |||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || ||||    
T  14641656 tctaaacctaattcccaaaacatcaatactaacaacaactacaaggttaaacccttttttagaattatacaacccattattagagaaagctaatcccacc 14641557  T
Q  269 cttaccttaggttagatgatcg 290  Q
    |||||||||| |||||||||||    
T  14641556 cttaccttagattagatgatcg 14641535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 169 - 288
Target Start/End: Original strand, 29907582 - 29907702
Alignment:
Q  169 tctaaccctaatttctataa-catcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacac 267  Q
    |||||||||||||||| ||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||| || |||    
T  29907582 tctaaccctaatttctctaatcatcaaacctaacaacaactacaaggttaaaccctttttcagaattatacaacccaatattaaagaaagctagtcccac 29907681  T
Q  268 ccttaccttaggttagatgat 288  Q
    ||||||||||| |||||||||    
T  29907682 ccttaccttagattagatgat 29907702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 169 - 288
Target Start/End: Original strand, 29948748 - 29948868
Alignment:
Q  169 tctaaccctaatttctataa-catcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacac 267  Q
    |||||||||||||||| ||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||| || |||    
T  29948748 tctaaccctaatttctctaatcatcaaacctaacaacaactacaaggttaaaccctttttcagaattatacaacccaatattaaagaaagctagtcccac 29948847  T
Q  268 ccttaccttaggttagatgat 288  Q
    ||||||||||| |||||||||    
T  29948848 ccttaccttagattagatgat 29948868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 169 - 288
Target Start/End: Original strand, 29997902 - 29998022
Alignment:
Q  169 tctaaccctaatttctataa-catcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacac 267  Q
    |||||||||||||||| ||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||| || |||    
T  29997902 tctaaccctaatttctctaatcatcaaacctaacaacaactacaaggttaaaccctttttcagaattatacaacccaatattaaagaaagctagtcccac 29998001  T
Q  268 ccttaccttaggttagatgat 288  Q
    ||||||||||| |||||||||    
T  29998002 ccttaccttagattagatgat 29998022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 172 - 282
Target Start/End: Complemental strand, 14152504 - 14152394
Alignment:
Q  172 aaccctaatttctataacatcaaaactaac-aacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacaccct 270  Q
    |||||||||| ||| |||||||||||  || |||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| || ||||||    
T  14152504 aaccctaatt-ctacaacatcaaaacctactaacaactacaaggttaaaccctttttcagaatgatacaactcattattagagaaagctagtcccaccct 14152406  T
Q  271 taccttaggtta 282  Q
    ||||||||||||    
T  14152405 taccttaggtta 14152394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 171 - 290
Target Start/End: Original strand, 6159350 - 6159470
Alignment:
Q  171 taaccctaatttctataacatcaaaactaacaacaactacaag--gttaaaccctttttcagaattatacaacccattattagagaaagctattcacacc 268  Q
    ||||||||||||||||||||||||||||||||| ||| ||||   ||||||||| |||| ||||| |||||||||||||||||||||||| | || ||||    
T  6159350 taaccctaatttctataacatcaaaactaacaa-aacaacaacatgttaaacccctttttagaatcatacaacccattattagagaaagcgagtctcacc 6159448  T
Q  269 cttaccttaggttagatgatcg 290  Q
    |||||||||| |||||||||||    
T  6159449 cttaccttagattagatgatcg 6159470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 171 - 278
Target Start/End: Complemental strand, 22841390 - 22841278
Alignment:
Q  171 taaccctaatttctataacatcaaaactaacaa--caactacaag---gttaaaccctttttcagaattatacaacccattattagagaaagctattcac 265  Q
    ||||||||||||||||||| |||||||||||||  |||| ||||    ||||||||||||||||||||||||||||||||||||||||||||||| || |    
T  22841390 taaccctaatttctataacctcaaaactaacaaaacaacaacaatcatgttaaaccctttttcagaattatacaacccattattagagaaagctagtccc 22841291  T
Q  266 acccttaccttag 278  Q
    |||||||| ||||    
T  22841290 acccttacattag 22841278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 171 - 277
Target Start/End: Complemental strand, 54875581 - 54875474
Alignment:
Q  171 taaccctaatttctataacatcaaaactaacaacaactacaag--gttaaaccctttttcagaattatacaacccattattagagaaagctattcacacc 268  Q
    ||||||||||||||||||||||||||||||||| ||| ||||   ||||||||| |||| ||||| |||||||||||||||||||||||||| || ||||    
T  54875581 taaccctaatttctataacatcaaaactaacaa-aacaacaacatgttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacc 54875483  T
Q  269 cttacctta 277  Q
    |||||||||    
T  54875482 cttacctta 54875474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 171 - 278
Target Start/End: Complemental strand, 3527261 - 3527156
Alignment:
Q  171 taaccctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacaccct 270  Q
    ||||||||||||||||||||||||||||||||| ||| ||| | |||||||| |||| | ||| |||||||||||||||||||||||||| || ||||||    
T  3527261 taaccctaatttctataacatcaaaactaacaa-aacaacatg-ttaaacccctttttaaaatcatacaacccattattagagaaagctagtcccaccct 3527164  T
Q  271 taccttag 278  Q
    ||||||||    
T  3527163 taccttag 3527156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 171 - 278
Target Start/End: Complemental strand, 2841613 - 2841505
Alignment:
Q  171 taaccctaatttctataacatcaaaactaacaacaactacaag--gttaaaccctttttcagaattatacaacccattattagagaaagctattcacacc 268  Q
    |||| |||||||||||||||||||||||||||| ||| ||||   ||||||||  |||| ||||| |||||||||||||||||||||||||| |||||||    
T  2841613 taactctaatttctataacatcaaaactaacaa-aacaacaacatgttaaacctctttttagaatcatacaacccattattagagaaagctagtcacacc 2841515  T
Q  269 cttaccttag 278  Q
    ||||||||||    
T  2841514 cttaccttag 2841505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 171 - 278
Target Start/End: Original strand, 6156656 - 6156763
Alignment:
Q  171 taaccctaatttctataacatcaaaactaacaacaactacaag--gttaaaccctttttcagaattatacaacccattattagagaaagctattcacacc 268  Q
    ||||||||||||||||||||||||||||||||| ||| ||||   ||||||||| |||| ||||| |||||||||||||||||||||||||| || ||||    
T  6156656 taaccctaatttctataacatcaaaactaacaa-aacaacaacatgttaaacccctttt-agaatcatacaacccattattagagaaagctagtcccacc 6156753  T
Q  269 cttaccttag 278  Q
    ||||||||||    
T  6156754 cttaccttag 6156763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 17 - 86
Target Start/End: Complemental strand, 2248067 - 2247998
Alignment:
Q  17 acatcacatgacaaaaacaacaacaatcagaagtgaattcatcaacaacaacattatactttaccaattt 86  Q
    ||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  2248067 acatctcataacaaaaacaacaacaatcagaagtgaattcatcaacaacaacattatacttcaccaattt 2247998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 171 - 277
Target Start/End: Complemental strand, 17684942 - 17684835
Alignment:
Q  171 taaccctaatttctataacatcaaaactaacaacaactacaag--gttaaaccctttttcagaattatacaacccattattagagaaagctattcacacc 268  Q
    ||||||||||||||||||||||||||||||||| ||| |||||  ||||||||| |||| ||||| |||||||||||||||| ||||| ||| || ||||    
T  17684942 taaccctaatttctataacatcaaaactaacaa-aacaacaagatgttaaacccctttttagaatcatacaacccattattacagaaaactagtcccacc 17684844  T
Q  269 cttacctta 277  Q
    |||||||||    
T  17684843 cttacctta 17684835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 167 - 290
Target Start/End: Complemental strand, 50350928 - 50350803
Alignment:
Q  167 aatctaaccctaatttctataacatcaaaactaacaacaactac-aaggttaaaccc--tttttcagaattatacaacccattattagagaaagctattc 263  Q
    |||||||||||||| |||||||||||||||||||||| |||||| ||||||||||||  |||||||||||||||  || ||| |||| |||| | || ||    
T  50350928 aatctaaccctaatctctataacatcaaaactaacaaaaactacaaaggttaaaccccttttttcagaattata-tactcatgattaaagaaggttagtc 50350830  T
Q  264 acacccttaccttaggttagatgatcg 290  Q
     |||||||||||||| |||||||||||    
T  50350829 ccacccttaccttagattagatgatcg 50350803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 172 - 277
Target Start/End: Original strand, 5215594 - 5215699
Alignment:
Q  172 aaccctaatttctataacatcaaaac-taacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacaccct 270  Q
    |||||||||| ||| ||||||||||| ||  || ||||||||||||||||||||||||| ||||||||||| |||||||||||||||||| |  ||||||    
T  5215594 aaccctaatt-ctacaacatcaaaacctattaataactacaaggttaaaccctttttcataattatacaactcattattagagaaagctagtgccaccct 5215692  T
Q  271 tacctta 277  Q
    |||||||    
T  5215693 tacctta 5215699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 171 - 278
Target Start/End: Original strand, 14442120 - 14442228
Alignment:
Q  171 taaccctaatttctataacatcaaaactaacaacaactacaag--gttaaaccctttttcagaattatacaacccattattagagaaagctattcacacc 268  Q
    ||||||||||||||||||||||||||||||||| ||| ||||   ||||||||  |||| ||||| |||||||||||||||| ||||||||| || ||||    
T  14442120 taaccctaatttctataacatcaaaactaacaa-aacaacaacatgttaaaccgctttttagaatcatacaacccattattacagaaagctagtcccacc 14442218  T
Q  269 cttaccttag 278  Q
    ||||||||||    
T  14442219 cttaccttag 14442228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 171 - 277
Target Start/End: Complemental strand, 17669805 - 17669698
Alignment:
Q  171 taaccctaatttctataacatcaaaactaacaacaactacaag--gttaaaccctttttcagaattatacaacccattattagagaaagctattcacacc 268  Q
    ||||||||||||||||||||||||||||||||| ||| ||||   ||||||||| |||| ||||| |||||||||||||||||||||||||| || || |    
T  17669805 taaccctaatttctataacatcaaaactaacaa-aacaacaacatgttaaacccctttttagaatcatacaacccattattagagaaagctagtcccatc 17669707  T
Q  269 cttacctta 277  Q
     ||||||||    
T  17669706 attacctta 17669698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 29 - 86
Target Start/End: Original strand, 24546876 - 24546933
Alignment:
Q  29 aaaaacaacaacaatcagaagtgaattcatcaacaacaacattatactttaccaattt 86  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  24546876 aaaaacaacaacaatcagaagtgaattcatcaacaacaacattatacttcaccaattt 24546933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 202 - 321
Target Start/End: Original strand, 15566721 - 15566847
Alignment:
Q  202 aacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcg-------caag 294  Q
    ||||||||||||||||||||||||||||||||||||||||  |  ||||||||||| || || ||||||||| |||| ||| |||||||       ||||    
T  15566721 aacaactacaaggttaaaccctttttcagaattatacaacttagaattagagaaagttagtcccacccttactttagattacatgatcggactcaacaag 15566820  T
Q  295 gtcctaccgctttctcttctctgactc 321  Q
     | ||||||||||||||||||||||||    
T  15566821 attctaccgctttctcttctctgactc 15566847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 199 - 270
Target Start/End: Complemental strand, 45803409 - 45803338
Alignment:
Q  199 aacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacaccct 270  Q
    ||||||||| || | ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||    
T  45803409 aacaacaacaacgatgttaaaccctttttcagaattatacaacccattattagagaaagctagtcccaccct 45803338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 201 - 260
Target Start/End: Complemental strand, 2247942 - 2247883
Alignment:
Q  201 caacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagcta 260  Q
    |||||||||||| ||||||||||||||||||||||||||||||||  |||||||||||||    
T  2247942 caacaactacaatgttaaaccctttttcagaattatacaacccatctttagagaaagcta 2247883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 166 - 237
Target Start/End: Complemental strand, 21845762 - 21845691
Alignment:
Q  166 aaatctaaccctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattata 237  Q
    ||||| || |||||||||||||||||||||||||  |||||||||||| |||||||||||||||||| ||||    
T  21845762 aaatcaaaacctaatttctataacatcaaaactattaacaactacaagcttaaaccctttttcagaactata 21845691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 31 - 86
Target Start/End: Complemental strand, 24549325 - 24549270
Alignment:
Q  31 aaacaacaacaatcagaagtgaattcatcaacaacaacattatactttaccaattt 86  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||    
T  24549325 aaacaacaacaataagaagtgaattcatcaacaacaacattatacttcaccaattt 24549270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 172 - 257
Target Start/End: Complemental strand, 50755360 - 50755274
Alignment:
Q  172 aaccctaatttctataacatcaaaactaacaa--caactacaaggttaaaccctttttcagaattatacaacccattattagagaaag 257  Q
    ||||||||||||||||||||||||||||||||  |||| || | ||||||||| |||| ||||| |||||| ||||||||||||||||    
T  50755360 aaccctaatttctataacatcaaaactaacaaagcaacaac-atgttaaacccctttttagaatcatacaatccattattagagaaag 50755274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 175 - 278
Target Start/End: Complemental strand, 3160728 - 3160626
Alignment:
Q  175 cctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttacc 274  Q
    |||||||||||||| |||||||||| |||||||||||| ||||||||| |||| |||||||||  || ||| |||| |||| | || || ||||||||||    
T  3160728 cctaatttctataatatcaaaactatcaacaactacaaagttaaacccatttttagaattata-tactcatgattaaagaaggttagtctcacccttacc 3160630  T
Q  275 ttag 278  Q
    ||||    
T  3160629 ttag 3160626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 199 - 278
Target Start/End: Complemental strand, 12917384 - 12917305
Alignment:
Q  199 aacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttag 278  Q
    ||||||||| || | |||||||||||||| ||||| ||||||||||||||||||||||| || || |||||||| |||||    
T  12917384 aacaacaacaaccatgttaaacccttttttagaatcatacaacccattattagagaaagttagtcccacccttatcttag 12917305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 171 - 237
Target Start/End: Original strand, 48631278 - 48631344
Alignment:
Q  171 taaccctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattata 237  Q
    ||||||| | |||||||||||||||||||  |||||||||||| |||||||||||||||||| ||||    
T  48631278 taaccctgacttctataacatcaaaactattaacaactacaagcttaaaccctttttcagaactata 48631344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 175 - 216
Target Start/End: Original strand, 13520408 - 13520449
Alignment:
Q  175 cctaatttctataacatcaaaactaacaacaactacaaggtt 216  Q
    ||||||| ||||||||||||||||||||||||||||||||||    
T  13520408 cctaattcctataacatcaaaactaacaacaactacaaggtt 13520449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 172 - 287
Target Start/End: Original strand, 6003133 - 6003247
Alignment:
Q  172 aaccctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacaccctt 271  Q
    ||||||||||||| |||||||| || || |||||||  ||| ||||  |||||||||||||||||| ||| || ||||| |||| | || || |||||||    
T  6003133 aaccctaatttctttaacatcacaattatcaacaacatcaaagttagcccctttttcagaattatagaactca-tattaaagaaggttagtcccaccctt 6003231  T
Q  272 accttaggttagatga 287  Q
    ||||||| || |||||    
T  6003232 accttagattggatga 6003247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 74
Target Start/End: Complemental strand, 25104148 - 25104106
Alignment:
Q  32 aacaacaacaatcagaagtgaattcatcaacaacaacattata 74  Q
    ||||| |||||||| ||||||||||||||||||||||||||||    
T  25104148 aacaataacaatcataagtgaattcatcaacaacaacattata 25104106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 166 - 278
Target Start/End: Original strand, 25202075 - 25202187
Alignment:
Q  166 aaatctaaccctaatttctataa-catcaaaa-ctaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattc 263  Q
    ||||| || |||||||||| ||| |||||||| | ||||||||| || | |||||||||| ||||||| ||||| ||||||||||||| ||| |||| ||    
T  25202075 aaatcaaaacctaatttctctaatcatcaaaatcaaacaacaacaaccatgttaaaccctatttcagatttata-aacccattattagcgaa-gctagtc 25202172  T
Q  264 acacccttaccttag 278  Q
     ||||||||||||||    
T  25202173 ccacccttaccttag 25202187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 235
Target Start/End: Complemental strand, 53646163 - 53646100
Alignment:
Q  172 aaccctaatttctataacatcaaaac-taacaacaactacaaggttaaaccctttttcagaatta 235  Q
    |||||||||| ||| ||||||||||| ||  ||||||||||||||||||||||||||||| ||||    
T  53646163 aaccctaatt-ctacaacatcaaaacctattaacaactacaaggttaaaccctttttcaggatta 53646100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 235
Target Start/End: Complemental strand, 54330411 - 54330348
Alignment:
Q  172 aaccctaatttctataacatcaaaac-taacaacaactacaaggttaaaccctttttcagaatta 235  Q
    |||||||||| ||| ||||||||||| ||  ||||||||||||||||||||||||||||| ||||    
T  54330411 aaccctaatt-ctacaacatcaaaacctattaacaactacaaggttaaaccctttttcaggatta 54330348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 301
Target Start/End: Original strand, 11563724 - 11563801
Alignment:
Q  224 ttttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcgcaaggtcctac 301  Q
    ||||||||||||||| ||  |  ||||||||| | || || |||||||||||||| ||||||||||| ||||| ||||    
T  11563724 ttttcagaattataccacttagaattagagaaggttagtcccacccttaccttagattagatgatcggaaggttctac 11563801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 212
Target Start/End: Complemental strand, 12155130 - 12155089
Alignment:
Q  171 taaccctaatttctataacatcaaaactaacaacaactacaa 212  Q
    ||||||||| |||||||||||||||||||  |||||||||||    
T  12155130 taaccctaacttctataacatcaaaactattaacaactacaa 12155089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 290
Target Start/End: Original strand, 17044966 - 17045031
Alignment:
Q  225 tttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcg 290  Q
    |||||||||||||||||  |  ||||||||||| || || |||||||||||||  |||||||||||    
T  17044966 tttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcg 17045031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 290
Target Start/End: Original strand, 17047126 - 17047191
Alignment:
Q  225 tttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcg 290  Q
    |||||||||||||||||  |  ||||||||||| || || |||||||||||||  |||||||||||    
T  17047126 tttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcg 17047191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 290
Target Start/End: Complemental strand, 17518925 - 17518860
Alignment:
Q  225 tttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcg 290  Q
    |||||||||||||||||  |  ||||||||||| || || ||||||| |||||| |||||||||||    
T  17518925 tttcagaattatacaacttagaattagagaaagttagtcccacccttgccttagattagatgatcg 17518860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 290
Target Start/End: Complemental strand, 17533787 - 17533722
Alignment:
Q  225 tttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcg 290  Q
    |||||||||||||||||  |  ||||||||||| || || ||||||| |||||| |||||||||||    
T  17533787 tttcagaattatacaacttagaattagagaaagttagtcccacccttgccttagattagatgatcg 17533722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 290
Target Start/End: Complemental strand, 22306635 - 22306570
Alignment:
Q  225 tttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcg 290  Q
    |||||||||||||||||  |  ||||||||||| || || |||||||||||||  |||||||||||    
T  22306635 tttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcg 22306570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 290
Target Start/End: Original strand, 49900730 - 49900795
Alignment:
Q  225 tttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcg 290  Q
    |||||||||||||||||  |  ||||||||||  || || |||||||||||||| |||||||||||    
T  49900730 tttcagaattatacaacttagaattagagaaaattagtcccacccttaccttagattagatgatcg 49900795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 171 - 231
Target Start/End: Complemental strand, 12151053 - 12150993
Alignment:
Q  171 taaccctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcaga 231  Q
    ||||||||| |||||||||||||||||||  ||||| ||||||  |||| || ||||||||    
T  12151053 taaccctaacttctataacatcaaaactattaacaaatacaagcctaaatcccttttcaga 12150993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 171 - 203
Target Start/End: Complemental strand, 13522385 - 13522353
Alignment:
Q  171 taaccctaatttctataacatcaaaactaacaa 203  Q
    |||||||||||||||||||||||||| ||||||    
T  13522385 taaccctaatttctataacatcaaaattaacaa 13522353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 214 - 282
Target Start/End: Original strand, 16050916 - 16050984
Alignment:
Q  214 gttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttaggtta 282  Q
    |||||||||  ||||||||| |||||||  |  ||||||||||| || || ||||||||||||||||||    
T  16050916 gttaaacccaatttcagaatcatacaacttagaattagagaaagttagtcccacccttaccttaggtta 16050984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 225 - 289
Target Start/End: Original strand, 17541434 - 17541498
Alignment:
Q  225 tttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatc 289  Q
    |||||||||||||||||  |  ||||||||||| || || |||||||||||||  ||||||||||    
T  17541434 tttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatc 17541498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 214 - 278
Target Start/End: Complemental strand, 48043539 - 48043477
Alignment:
Q  214 gttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttag 278  Q
    |||||||||| ||||| ||||||| || |||||||||||||| |||| | |||||||||||||||    
T  48043539 gttaaaccctatttcaaaattata-aatccattattagagaa-gctagttacacccttaccttag 48043477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0369 (Bit Score: 158; Significance: 5e-84; HSPs: 2)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 158; E-Value: 5e-84
Query Start/End: Original strand, 79 - 288
Target Start/End: Complemental strand, 15813 - 15605
Alignment:
Q  79 accaatttaatccacaataatcactttatacaaatatgcacttatgggtagaagtagaaaaagagattatacaaaagattatgaatgaaatctaacccta 178  Q
    ||||||| |||||||||||||||||||||||| |||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15813 accaattaaatccacaataatcactttatacatatattcacttatgtgtagaagtagaaaaagagattatacaaaagattatgaatgaaatctaacccta 15714  T
Q  179 atttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttag 278  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||| |||||||||||| ||| || || ||||||||||||||    
T  15713 atttctataacatcaaaactaacaacaactacaaggttaaacccttttttagaatcatacaaaccattattagag-aagttagtcccacccttaccttag 15615  T
Q  279 gttagatgat 288  Q
     |||||||||    
T  15614 attagatgat 15605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0369; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 17 - 86
Target Start/End: Complemental strand, 16003 - 15934
Alignment:
Q  17 acatcacatgacaaaaacaacaacaatcagaagtgaattcatcaacaacaacattatactttaccaattt 86  Q
    ||||| ||| |||||||||||||||||||||||||||||||||||||| ||| |||||||| ||||||||    
T  16003 acatctcataacaaaaacaacaacaatcagaagtgaattcatcaacaataacgttatacttcaccaattt 15934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1186 (Bit Score: 156; Significance: 7e-83; HSPs: 2)
Name: scaffold1186
Description:

Target: scaffold1186; HSP #1
Raw Score: 156; E-Value: 7e-83
Query Start/End: Original strand, 79 - 278
Target Start/End: Original strand, 1876 - 2073
Alignment:
Q  79 accaatttaatccacaataatcactttatacaaatatgcacttatgggtagaagtagaaaaagagattatacaaaagattatgaatgaaatctaacccta 178  Q
    ||||||| |||||||||||||||||||||||||||| |||||||||| ||||| |||||||| |||||||| ||||||||||||| ||||||||||||||    
T  1876 accaattaaatccacaataatcactttatacaaataagcacttatggttagaattagaaaaa-agattata-aaaagattatgaacgaaatctaacccta 1973  T
Q  179 atttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttag 278  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||    
T  1974 atttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctagtctcacccttaccttag 2073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1186; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 30 - 86
Target Start/End: Original strand, 1699 - 1755
Alignment:
Q  30 aaaacaacaacaatcagaagtgaattcatcaacaacaacattatactttaccaattt 86  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||| || |||||    
T  1699 aaaacaacaacgatcagaagtgaattcatcaacaacaacattatacttcacaaattt 1755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 156; Significance: 7e-83; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 156; E-Value: 7e-83
Query Start/End: Original strand, 79 - 278
Target Start/End: Complemental strand, 186392 - 186195
Alignment:
Q  79 accaatttaatccacaataatcactttatacaaatatgcacttatgggtagaagtagaaaaagagattatacaaaagattatgaatgaaatctaacccta 178  Q
    ||||||| |||||||||||||||||||||||||||| |||||||||| ||||| |||||||| |||||||| ||||||||||||| ||||||||||||||    
T  186392 accaattaaatccacaataatcactttatacaaataagcacttatggttagaattagaaaaa-agattata-aaaagattatgaacgaaatctaacccta 186295  T
Q  179 atttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttag 278  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||    
T  186294 atttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctagtctcacccttaccttag 186195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 30 - 86
Target Start/End: Complemental strand, 186569 - 186513
Alignment:
Q  30 aaaacaacaacaatcagaagtgaattcatcaacaacaacattatactttaccaattt 86  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||| || |||||    
T  186569 aaaacaacaacgatcagaagtgaattcatcaacaacaacattatacttcacaaattt 186513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0231 (Bit Score: 152; Significance: 2e-80; HSPs: 1)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 79 - 278
Target Start/End: Complemental strand, 17719 - 17520
Alignment:
Q  79 accaatttaatccacaataatcactttatacaaatatgcacttatgggtagaagtagaaaaagagattatacaaaagattatgaatgaaatctaacccta 178  Q
    ||||||| ||||||||||||||||||||||||||||  ||||||||||||||||||||||||| |||| |||||||||||||||||||||| ||||||||    
T  17719 accaattaaatccacaataatcactttatacaaatagacacttatgggtagaagtagaaaaagtgattgtacaaaagattatgaatgaaatataacccta 17620  T
Q  179 atttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttag 278  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| ||  |||||||||||||    
T  17619 atttctataacagcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaatccattattagaaaaagctagtccgacccttaccttag 17520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203 (Bit Score: 151; Significance: 7e-80; HSPs: 1)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 151; E-Value: 7e-80
Query Start/End: Original strand, 80 - 290
Target Start/End: Complemental strand, 18137 - 17927
Alignment:
Q  80 ccaatttaatccacaataatcactttatacaaatatgcacttatgggtagaagtagaaaaagagattatacaaaagattatgaatgaaatctaaccctaa 179  Q
    |||||| ||| |||||||||||||||||||||||| ||||||||||||||||||| |||||||||||| |||||| ||||||||||||||||||||||||    
T  18137 ccaattaaattcacaataatcactttatacaaataagcacttatgggtagaagtaaaaaaagagattaaacaaaatattatgaatgaaatctaaccctaa 18038  T
Q  180 tttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttagg 279  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||  |  ||||||||||| || || ||||||||||||||     
T  18037 tttctataacatcaaaactaacaacaactacaaggttaaatcctttttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaga 17938  T
Q  280 ttagatgatcg 290  Q
    |||||||||||    
T  17937 ttagatgatcg 17927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0853 (Bit Score: 144; Significance: 1e-75; HSPs: 1)
Name: scaffold0853
Description:

Target: scaffold0853; HSP #1
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 79 - 286
Target Start/End: Complemental strand, 2652 - 2445
Alignment:
Q  79 accaatttaatccacaataatcactttatacaaatatgcacttatgggtagaagtagaaaaagagattatacaaaagattatgaatgaaatctaacccta 178  Q
    ||||||| |||||||||||||||||||||||  | |  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2652 accaattaaatccacaataatcactttatacgtaga--cacttatgggtagaagtagaaaaagagattatacaaaagattatgaatgaaatctaacccta 2555  T
Q  179 atttctataacatcaaaactaacaacaactacaaggttaaacc--ctttttcagaattatacaacccattattagagaaagctattcacacccttacctt 276  Q
    |||||||||||||||||||||| ||| ||||||||||||||||   |||||||||||||||||||||||||||||||||||||| || ||||||||||||    
T  2554 atttctataacatcaaaactaataacgactacaaggttaaaccatttttttcagaattatacaacccattattagagaaagctagtcccacccttacctt 2455  T
Q  277 aggttagatg 286  Q
    |  |||||||    
T  2454 aaattagatg 2445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 138; Significance: 4e-72; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 80 - 290
Target Start/End: Complemental strand, 62048 - 61835
Alignment:
Q  80 ccaatttaatccacaataatcactttatacaaatatgcacttatgggtagaagtagaaaaagagattatacaaaagattatgaatgaaatctaaccctaa 179  Q
    |||||| |||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  62048 ccaattaaatccacaataatcactttatacaaataagcacttataggtagaagtagaaaaagagattaaacaaaagattatgaatgaaatctaaccctaa 61949  T
Q  180 tttc----tataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttacct 275  Q
    ||||    |||||||||||||||||||||||||||||||||||| || ||||||||||||||||||  |  ||||||||||| || || |||||||||||    
T  61948 tttctatatataacatcaaaactaacaacaactacaaggttaaatcc-ttttcagaattatacaacttagaattagagaaagttagtctcacccttacct 61850  T
Q  276 taggttagatgatcg 290  Q
    ||| |||||||||||    
T  61849 tagattagatgatcg 61835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 129; Significance: 9e-67; HSPs: 1)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 79 - 227
Target Start/End: Complemental strand, 24080 - 23932
Alignment:
Q  79 accaatttaatccacaataatcactttatacaaatatgcacttatgggtagaagtagaaaaagagattatacaaaagattatgaatgaaatctaacccta 178  Q
    ||||||| |||||||||||||||||||||||| |||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24080 accaattaaatccacaataatcactttatacatatagtcacttatgggtagaagtagaaaaagagattatacaaaagattatgaatgaaatctaacccta 23981  T
Q  179 atttctataacatcaaaactaacaacaactacaaggttaaacccttttt 227  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||    
T  23980 atttctataacatcaaaactaataacaactacaaggttaaacccttttt 23932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0414 (Bit Score: 123; Significance: 4e-63; HSPs: 1)
Name: scaffold0414
Description:

Target: scaffold0414; HSP #1
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 79 - 290
Target Start/End: Complemental strand, 11359 - 11147
Alignment:
Q  79 accaatttaatccacaataatcactttatacaaatatgcacttatgggtagaagtagaaaaagagattatacaaaagattatgaatgaaatctaacccta 178  Q
    ||||||| || |||||||||||||||||||||||||  |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  11359 accaattaaacccacaataatcactttatacaaatagacacttatgggtagaagaagaaaaagagattatacaaaagattatgaatgaaatctaacccta 11260  T
Q  179 atttctataacatcaaaactaac--aacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttacctt 276  Q
    |||| ||||||||||||||||||  |||||| || | | ||||||| |||| ||||| |||||||||||||||||||||||||| || || |||||||||    
T  11259 atttatataacatcaaaactaacaaaacaacaac-atgataaacccctttttagaatcatacaacccattattagagaaagctagtcccatccttacctt 11161  T
Q  277 aggttagatgatcg 290  Q
    |  |||| ||||||    
T  11160 aaattaggtgatcg 11147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0676 (Bit Score: 91; Significance: 4e-44; HSPs: 2)
Name: scaffold0676
Description:

Target: scaffold0676; HSP #1
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 175 - 289
Target Start/End: Original strand, 2831 - 2945
Alignment:
Q  175 cctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttacc 274  Q
    ||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||    
T  2831 cctaattcctataacatcgaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctagtcccacccttacc 2930  T
Q  275 ttaggttagatgatc 289  Q
    |||| ||| ||||||    
T  2931 ttagattaaatgatc 2945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0676; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 172 - 237
Target Start/End: Original strand, 2762 - 2828
Alignment:
Q  172 aaccctaatttctataacatcaaaactaacaacaactaca--aggttaaaccctttttcagaattata 237  Q
    ||||||||||||||||||||||||| |||||| ||| |||  | ||||||||| |||| |||||||||    
T  2762 aaccctaatttctataacatcaaaagtaacaa-aacgacaacatgttaaacccctttttagaattata 2828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1256 (Bit Score: 90; Significance: 2e-43; HSPs: 1)
Name: scaffold1256
Description:

Target: scaffold1256; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 190 - 315
Target Start/End: Complemental strand, 2287 - 2162
Alignment:
Q  190 atcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatc 289  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||  |  ||||||||||  || || |||||||||||||||||||||||||    
T  2287 atcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacttagaattagagaaaattagtcccacccttaccttaggttagatgatc 2188  T
Q  290 gcaaggtcctaccgctttctcttctc 315  Q
    ||||||| ||||||||||||||||||    
T  2187 gcaaggttctaccgctttctcttctc 2162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 90; Significance: 2e-43; HSPs: 2)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 167 - 316
Target Start/End: Original strand, 26669 - 26818
Alignment:
Q  167 aatctaaccctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcaca 266  Q
    |||||||||||||| |||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| |  ||||||||||| || || ||    
T  26669 aatctaaccctaatctctataacatcaaagctaacaacaactacaaagttaaaccctttttcagaattatacaacctaaaattagagaaagttaatccca 26768  T
Q  267 cccttaccttaggttagatgatcgcaaggtcctaccgctttctcttctct 316  Q
    |||||||| ||| ||   |||||||||||| |||||||||||||||||||    
T  26769 cccttaccgtagattgattgatcgcaaggttctaccgctttctcttctct 26818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 175 - 237
Target Start/End: Original strand, 23564 - 23626
Alignment:
Q  175 cctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattata 237  Q
    ||||| |||||||||||||||||||  |||||||||||  ||||||||||||| |||||||||    
T  23564 cctaacttctataacatcaaaactattaacaactacaaaattaaacccttttttagaattata 23626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 83; Significance: 3e-39; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 171 - 277
Target Start/End: Original strand, 1022 - 1128
Alignment:
Q  171 taaccctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacaccct 270  Q
    ||||| ||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||| || ||||||    
T  1022 taaccataatttctaaaacatcaaaactaacaacatctacaaggttaaaccctttttcagaattatacaatccattattagagaaagctagtctcaccct 1121  T
Q  271 tacctta 277  Q
    |||||||    
T  1122 tacctta 1128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 83; Significance: 3e-39; HSPs: 2)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 175 - 288
Target Start/End: Complemental strand, 14689 - 14575
Alignment:
Q  175 cctaatttctataa-catcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttac 273  Q
    |||||||||| ||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||| || |||||||||    
T  14689 cctaatttctctaatcatcaaaactaacaacaactacaaatttaaaccctttttcagaattatacaacccattattagagaaagctagtctcacccttac 14590  T
Q  274 cttaggttagatgat 288  Q
    ||||| |||||||||    
T  14589 cttagattagatgat 14575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061; HSP #2
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 175 - 288
Target Start/End: Complemental strand, 23747 - 23633
Alignment:
Q  175 cctaatttctataa-catcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttac 273  Q
    |||||||||| ||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||| || |||||||||    
T  23747 cctaatttctctaatcatcaaaactaacaacaactacaaatttaaaccctttttcagaattatacaacccattattagagaaagctagtctcacccttac 23648  T
Q  274 cttaggttagatgat 288  Q
    ||||| |||||||||    
T  23647 cttagattagatgat 23633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 81; Significance: 4e-38; HSPs: 5)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 169 - 315
Target Start/End: Complemental strand, 16528 - 16380
Alignment:
Q  169 tctaaccctaatttctataa-catcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacac 267  Q
    |||||||||||||||| ||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| || || |||    
T  16528 tctaaccctaatttctctaatcatcaaacctaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagataaagttaatctcac 16429  T
Q  268 ccttaccttaggttagatgatcgcaaggtcctac-cgctttctcttctc 315  Q
    ||||||||||| ||   ||||| |||||| ||||  |||||||||||||    
T  16428 ccttaccttagattgattgatcacaaggttctacaagctttctcttctc 16380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 169 - 321
Target Start/End: Complemental strand, 18811 - 18656
Alignment:
Q  169 tctaaccctaatttctataa-catcaaaac-taacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcaca 266  Q
    |||||||||||||||| ||| |||||  || ||||||||||||||||| |||||| ||||| ||||||||||||| ||||||||||||||| || || ||    
T  18811 tctaaccctaatttctctaatcatcatgacctaacaacaactacaaggctaaaccgtttttaagaattatacaactcattattagagaaagttaatccca 18712  T
Q  267 cccttaccttaggttagatgatcgcaaggtcctac-cgctttctcttctctgactc 321  Q
    |||| ||||||| || | ||||  |||||| ||||  |||||||||||||||||||    
T  18711 ccctcaccttagattggttgattacaaggttctacaagctttctcttctctgactc 18656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 18962 - 18902
Alignment:
Q  172 aaccctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaa 232  Q
    |||||||| ||||||| ||||||||||| ||||||||||||  ||||||| ||||||||||    
T  18962 aaccctaacttctatagcatcaaaactatcaacaactacaaaattaaaccttttttcagaa 18902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 16679 - 16619
Alignment:
Q  172 aaccctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaa 232  Q
    |||||||| ||||||| ||||||||||| ||||||||| ||  |||||| |||||||||||    
T  16679 aaccctaacttctatagcatcaaaactatcaacaactataaaattaaactctttttcagaa 16619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 265 - 321
Target Start/End: Complemental strand, 158834 - 158778
Alignment:
Q  265 cacccttaccttaggttagatgatcgcaaggtcctaccgctttctcttctctgactc 321  Q
    |||||||||||||| ||   ||||||||||||  |||||||||||||||||||||||    
T  158834 cacccttaccttagattgattgatcgcaaggttttaccgctttctcttctctgactc 158778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0505 (Bit Score: 79; Significance: 6e-37; HSPs: 1)
Name: scaffold0505
Description:

Target: scaffold0505; HSP #1
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 167 - 288
Target Start/End: Original strand, 4878 - 4999
Alignment:
Q  167 aatctaaccctaatttctataacatcaaaactaacaacaactac-aaggttaaaccctttttcagaattatacaacccattattagagaaagctattcac 265  Q
    ||||||||||||||  |||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||| ||||||||||||||||||| || |    
T  4878 aatctaaccctaatcactataacatcaaaactaacaacaactacaaaggttaaacccttttacagaattatacaa-ccattattagagaaagctagtccc 4976  T
Q  266 acccttaccttaggttagatgat 288  Q
    ||||||||||||  |||||||||    
T  4977 acccttaccttatattagatgat 4999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 78; Significance: 3e-36; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 169 - 278
Target Start/End: Original strand, 13893 - 14002
Alignment:
Q  169 tctaaccctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacc 268  Q
    ||||| ||||||| | | |||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||| || ||||    
T  13893 tctaaacctaattcccaaaacatcaaaactaacaacaacttcaaggttaaaccctttttcagaattttacaacccattattagagaaagctagtcccacc 13992  T
Q  269 cttaccttag 278  Q
    ||||||||||    
T  13993 cttaccttag 14002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 169 - 290
Target Start/End: Complemental strand, 18749 - 18627
Alignment:
Q  169 tctaaccctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaatta-tacaacccattattagagaaagctattcacac 267  Q
    ||||| ||||||| | | ||||||||||||||||||||||||||||||||||| ||||||| ||||| |||||| |||||||||||||||||| || |||    
T  18749 tctaaacctaattcccaaaacatcaaaactaacaacaactacaaggttaaaccttttttcaaaattattacaactcattattagagaaagctagtcccac 18650  T
Q  268 ccttaccttaggttagatgatcg 290  Q
    ||||||||||| |||||||||||    
T  18649 ccttaccttagattagatgatcg 18627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 72; Significance: 1e-32; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 167 - 321
Target Start/End: Complemental strand, 6529 - 6376
Alignment:
Q  167 aatctaaccctaatttctataacatcaaaactaacaacaactacaa-ggttaaaccctttttcagaattatacaacccattattagagaaagctattcac 265  Q
    |||||| || |||| ||||||||||||||||||||||||||||||| ||||||||||||||| ||||||| | | |  || ||||  ||| | || || |    
T  6529 aatctagccataatctctataacatcaaaactaacaacaactacaaaggttaaacccttttt-agaattacata-cttatgattaatgaaggttagtccc 6432  T
Q  266 acccttaccttaggttagatgatcgcaaggtcctaccgctttctcttctctgactc 321  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  6431 acccttaccttaggttagatgatcgcaaggttctaccgctttctcttctctgactc 6376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213 (Bit Score: 71; Significance: 4e-32; HSPs: 2)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 172 - 290
Target Start/End: Original strand, 19154 - 19272
Alignment:
Q  172 aaccctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacaccctt 271  Q
    |||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||  |  ||||||||||| || || |||||||    
T  19154 aacccttatttctataacatcaaaactaataacaactacaaggttaaaccctttttcagaattatacaacttagaattagagaaagttagtcccaccctt 19253  T
Q  272 accttaggttagatgatcg 290  Q
    || |||| |||||| ||||    
T  19254 acgttagattagatcatcg 19272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 179 - 224
Target Start/End: Original strand, 19115 - 19160
Alignment:
Q  179 atttctataacatcaaaactaacaacaactacaaggttaaaccctt 224  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||    
T  19115 atttctataacatcaaaactatcaacaactacaaggttaaaccctt 19160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 171 - 301
Target Start/End: Complemental strand, 8853 - 8722
Alignment:
Q  171 taaccctaatttctataacatcaaaactaacaacaactacaa--ggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacc 268  Q
    ||||||||||||||||||||||||||||||||| ||| ||||  |||| ||||| |||| ||||| ||||||||||||||||||| |||||| || ||||    
T  8853 taaccctaatttctataacatcaaaactaacaa-aacaacaataggttcaacccctttttagaatcatacaacccattattagagtaagctagtctcacc 8755  T
Q  269 cttaccttaggttagatgatcgcaaggtcctac 301  Q
    |||||||||| ||||||||||| ||||| ||||    
T  8754 cttaccttagattagatgatcggaaggttctac 8722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 69; Significance: 6e-31; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 202 - 318
Target Start/End: Original strand, 6395 - 6511
Alignment:
Q  202 aacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcgcaaggtcctac 301  Q
    |||||||||||| |||| |||||||||||||||| ||||| |||||||||||||||||| ||  ||||||||||||| ||   |||||||||||| ||||    
T  6395 aacaactacaagattaatccctttttcagaattacacaactcattattagagaaagctagtcttacccttaccttagattgattgatcgcaaggttctac 6494  T
Q  302 cgctttctcttctctga 318  Q
    |||||||||||||||||    
T  6495 cgctttctcttctctga 6511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0431 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0431
Description:

Target: scaffold0431; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 172 - 290
Target Start/End: Original strand, 5578 - 5698
Alignment:
Q  172 aaccctaatttctataacatcaaaac-taacaacaactacaaggttaaaccctttt--tcagaattatacaacccattattagagaaagctattcacacc 268  Q
    |||||||||| ||| ||||||||||| ||  ||||||||||| |||||||||||||  |||||||||||||||||||||||||||||||||| || ||||    
T  5578 aaccctaatt-ctacaacatcaaaacctattaacaactacaaagttaaaccctttttttcagaattatacaacccattattagagaaagctagtcccacc 5676  T
Q  269 cttaccttaggttagatgatcg 290  Q
    |||||||||  |||||||||||    
T  5677 cttaccttaaattagatgatcg 5698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174 (Bit Score: 63; Significance: 2e-27; HSPs: 3)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 171 - 290
Target Start/End: Original strand, 19801 - 19921
Alignment:
Q  171 taaccctaatttctataacatcaaaactaacaacaactacaag--gttaaaccctttttcagaattatacaacccattattagagaaagctattcacacc 268  Q
    ||||||||||||||||||||||||||||||||| ||| ||||   ||||||||| |||| ||||| |||||||||||||||||||||| ||| ||  |||    
T  19801 taaccctaatttctataacatcaaaactaacaa-aacaacaacatgttaaacccctttttagaatcatacaacccattattagagaaatctagtcctacc 19899  T
Q  269 cttaccttaggttagatgatcg 290  Q
    |||||||||| |||||||||||    
T  19900 cttaccttagattagatgatcg 19921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 216 - 288
Target Start/End: Original strand, 5445 - 5517
Alignment:
Q  216 taaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgat 288  Q
    |||||||||||||||||||||||||| ||||||||||||||| || || |||||||||||||| |||||||||    
T  5445 taaaccctttttcagaattatacaactcattattagagaaaggtagtcccacccttaccttagattagatgat 5517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 199 - 290
Target Start/End: Original strand, 11590 - 11681
Alignment:
Q  199 aacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcg 290  Q
    ||||||||| || | ||||||||||||||||||||||||||||||||| |||||||||  || || |||||||| ||||  |||||||||||    
T  11590 aacaacaacaacgatgttaaaccctttttcagaattatacaacccatttttagagaaatttagtcccacccttatcttacattagatgatcg 11681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0379 (Bit Score: 62; Significance: 9e-27; HSPs: 1)
Name: scaffold0379
Description:

Target: scaffold0379; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 171 - 289
Target Start/End: Original strand, 10893 - 11011
Alignment:
Q  171 taaccctaatttctataacatcaaaactaacaacaactacaag--gttaaaccctttttcagaattatacaacccattattagagaaagctattcacacc 268  Q
    ||||||||||||||||||||||||||||||||| ||| ||||   |||||||||||||| ||||| |||||||||||||||||||||||||| |  ||||    
T  10893 taaccctaatttctataacatcaaaactaacaa-aacaacaacatgttaaacccttttt-agaatcatacaacccattattagagaaagctagttccacc 10990  T
Q  269 cttaccttaggttagatgatc 289  Q
    |||||||||  ||||||||||    
T  10991 cttaccttatattagatgatc 11011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 61; Significance: 4e-26; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 171 - 288
Target Start/End: Complemental strand, 127450 - 127332
Alignment:
Q  171 taaccctaatttctataacatcaaaactaacaacaactacaag--gttaaaccctttttcagaattatacaacccattattagagaaagctattcacacc 268  Q
    |||||||||| |||||||||||||||||||||| ||| ||||   ||||||||| |||| ||||| |||||| ||||||||||||||||||| || ||||    
T  127450 taaccctaatctctataacatcaaaactaacaa-aacaacaacatgttaaacccctttttagaatcatacaatccattattagagaaagctagtcccacc 127352  T
Q  269 cttaccttaggttagatgat 288  Q
    |||||||||| |||||||||    
T  127351 cttaccttagattagatgat 127332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0401 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0401
Description:

Target: scaffold0401; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 202 - 321
Target Start/End: Original strand, 8799 - 8917
Alignment:
Q  202 aacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcgcaaggtcctac 301  Q
    |||| |||||||||||||||||||||||| |||| | | |  || |||| |||| | || || |||||||||||||||||||||||||||||||| ||||    
T  8799 aacatctacaaggttaaaccctttttcaggattacata-cttatgattaaagaaggttagtcccacccttaccttaggttagatgatcgcaaggttctac 8897  T
Q  302 cgctttctcttctctgactc 321  Q
    ||||||||||||||||||||    
T  8898 cgctttctcttctctgactc 8917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0385 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0385
Description:

Target: scaffold0385; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 172 - 320
Target Start/End: Original strand, 293 - 440
Alignment:
Q  172 aaccctaatttctataacatcaaaac-taacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacaccct 270  Q
    |||||||||| ||| ||||||||||| ||  ||||||||||||||||||||||||||||| |||| | | |  || |||| ||||   || || ||||||    
T  293 aaccctaatt-ctacaacatcaaaacctattaacaactacaaggttaaaccctttttcaggattacata-cttatgattaaagaagattaatctcaccct 390  T
Q  271 taccttaggttagatgatcgcaaggtcctaccgctttctcttctctgact 320  Q
    |||||||||||||||||||||||||| ||||||||||||||| |||||||    
T  391 taccttaggttagatgatcgcaaggttctaccgctttctcttttctgact 440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0298 (Bit Score: 58; Significance: 2e-24; HSPs: 2)
Name: scaffold0298
Description:

Target: scaffold0298; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 17 - 86
Target Start/End: Original strand, 236 - 305
Alignment:
Q  17 acatcacatgacaaaaacaacaacaatcagaagtgaattcatcaacaacaacattatactttaccaattt 86  Q
    ||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  236 acatctcataacaaaaacaacaacaatcagaagtgaattcatcaacaacaacattatacttcaccaattt 305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0298; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 201 - 260
Target Start/End: Original strand, 361 - 420
Alignment:
Q  201 caacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagcta 260  Q
    |||||||||||| ||||||||||||||||||||||||||||||||  |||||||||||||    
T  361 caacaactacaatgttaaaccctttttcagaattatacaacccatctttagagaaagcta 420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 57; Significance: 9e-24; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 205 - 321
Target Start/End: Complemental strand, 9999 - 9884
Alignment:
Q  205 aactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcgcaaggtcctaccgc 304  Q
    |||||||||| |||||||||||||||||||| | | |  || |||| |||| | || || |||||||||||||||||||||||||||||||| |||||||    
T  9999 aactacaaggctaaaccctttttcagaattacata-cttatgattaaagaaggttagtcccacccttaccttaggttagatgatcgcaaggttctaccgc 9901  T
Q  305 tttctcttctctgactc 321  Q
    ||||||||||| |||||    
T  9900 tttctcttctccgactc 9884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0594 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0594
Description:

Target: scaffold0594; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 199 - 278
Target Start/End: Original strand, 2221 - 2300
Alignment:
Q  199 aacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttag 278  Q
    ||||||||| || | ||||||||||||||||||||||||||||||||||||| ||||||||| || ||||||||||||||    
T  2221 aacaacaacaactatgttaaaccctttttcagaattatacaacccattattatagaaagctagtcccacccttaccttag 2300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 167 - 237
Target Start/End: Original strand, 28493 - 28564
Alignment:
Q  167 aatctaaccctaatttctataacatcaaaactaacaacaactac-aaggttaaaccctttttcagaattata 237  Q
    |||||||||||||| |||||||||| |||||||||||||||||| |||||||||||||||||||||||||||    
T  28493 aatctaaccctaatctctataacataaaaactaacaacaactacaaaggttaaaccctttttcagaattata 28564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439 (Bit Score: 55; Significance: 1e-22; HSPs: 2)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 172 - 321
Target Start/End: Original strand, 4369 - 4517
Alignment:
Q  172 aaccctaatttctataacatcaaaac-taacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacaccct 270  Q
    |||||||||| ||| ||||||||||| ||  |||||||||||||||||||| |||||| | |||||| | |  || |||| |||| | || || ||||||    
T  4369 aaccctaatt-ctacaacatcaaaacctattaacaactacaaggttaaaccttttttcgggattatata-cttatgattaaagaaggttagtcccaccct 4466  T
Q  271 taccttaggttagatgatcgcaaggtcctaccgctttctcttctctgactc 321  Q
    ||||||||||||||||||||||||||  |||||||||||||||| ||||||    
T  4467 taccttaggttagatgatcgcaaggttgtaccgctttctcttctgtgactc 4517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 171 - 203
Target Start/End: Original strand, 12256 - 12288
Alignment:
Q  171 taaccctaatttctataacatcaaaactaacaa 203  Q
    ||||| |||||||||||||||||||||||||||    
T  12256 taaccttaatttctataacatcaaaactaacaa 12288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 171 - 278
Target Start/End: Original strand, 40052 - 40160
Alignment:
Q  171 taaccctaatttctataacatcaaaactaacaacaactacaag--gttaaaccctttttcagaattatacaacccattattagagaaagctattcacacc 268  Q
    ||||||||||||||||||||||||||||||||| ||| ||||   ||||||||| |||| ||||| ||||||||||||||||||||||| || || || |    
T  40052 taaccctaatttctataacatcaaaactaacaa-aacaacaacatgttaaacccctttttagaatcatacaacccattattagagaaagttagtcgcatc 40150  T
Q  269 cttaccttag 278  Q
    ||||||||||    
T  40151 cttaccttag 40160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 55; Significance: 1e-22; HSPs: 5)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 247 - 321
Target Start/End: Complemental strand, 328318 - 328244
Alignment:
Q  247 attagagaaagctattcacacccttaccttaggttagatgatcgcaaggtcctaccgctttctcttctctgactc 321  Q
    ||||||||||| || || |||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  328318 attagagaaagttagtcccacccttaccttaggttagatgatcgcaaggttctaccgctttctcttctctcactc 328244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 199 - 288
Target Start/End: Complemental strand, 66150 - 66061
Alignment:
Q  199 aacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgat 288  Q
    ||||||||| || | ||||||||||||||||||||||||||||||||||||| ||||| ||| || ||||||||||||||  ||||||||    
T  66150 aacaacaacaaccatgttaaaccctttttcagaattatacaacccattattaaagaaatctagtcccacccttaccttagaatagatgat 66061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 174 - 286
Target Start/End: Original strand, 75885 - 75998
Alignment:
Q  174 ccctaatttctataacatcaaaactaacaacaactacaag--gttaaaccctttttcagaattatacaacccattattagagaaagctattcacaccctt 271  Q
    ||||||||  ||||||||||||||||| || ||| ||||   ||||||||| |||| ||||| ||||||||||||||| |||||||||| || |||||||    
T  75885 ccctaattcttataacatcaaaactaataa-aacaacaacatgttaaacccctttttagaatcatacaacccattattggagaaagctagtcccaccctt 75983  T
Q  272 accttaggttagatg 286  Q
    ||||||| |||||||    
T  75984 accttagattagatg 75998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #4
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 209 - 278
Target Start/End: Original strand, 111344 - 111413
Alignment:
Q  209 acaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttag 278  Q
    |||| ||||||||| |||| ||||| ||||||||||||||||||||||||||  | ||||||||||||||    
T  111344 acaatgttaaacccctttttagaatcatacaacccattattagagaaagctagccccacccttaccttag 111413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 171 - 286
Target Start/End: Original strand, 73032 - 73148
Alignment:
Q  171 taaccctaatttctataacatcaaaactaacaacaactacaag--gttaaaccctttttcagaattatacaacccattattagagaaagctattcacacc 268  Q
    |||||||||||  |||||||| |||||||| || ||| ||||   ||||||||| |||| ||||| ||||||| ||||||||||||||| || || ||||    
T  73032 taaccctaattcttataacataaaaactaataa-aacaacaacatgttaaacccctttttagaatcatacaactcattattagagaaagttagtcccacc 73130  T
Q  269 cttaccttaggttagatg 286  Q
    |||||||||  |||||||    
T  73131 cttaccttacattagatg 73148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 194 - 278
Target Start/End: Original strand, 23503 - 23587
Alignment:
Q  194 aaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttag 278  Q
    ||||||||||||||| ||||||| ||||| |||| ||| |||||||||||||||||||||||||||| ||  |||||||||||||    
T  23503 aaactaacaacaactgcaaggtttaacccctttttagatttatacaacccattattagagaaagctagtcctacccttaccttag 23587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 172 - 236
Target Start/End: Complemental strand, 40268 - 40204
Alignment:
Q  172 aaccctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattat 236  Q
    |||||||| ||||||||||||||||||| ||||||||||| ||||||||||||||| ||||||||    
T  40268 aaccctaacttctataacatcaaaactatcaacaactacatggttaaacccttttttagaattat 40204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 175 - 237
Target Start/End: Complemental strand, 59757 - 59695
Alignment:
Q  175 cctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattata 237  Q
    |||||||||||||| |||||||||| |||||||||||| ||||||||||||||||||||||||    
T  59757 cctaatttctataatatcaaaactatcaacaactacaaagttaaaccctttttcagaattata 59695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 17 - 86
Target Start/End: Original strand, 10447 - 10516
Alignment:
Q  17 acatcacatgacaaaaacaacaacaatcagaagtgaattcatcaacaacaacattatactttaccaattt 86  Q
    ||||| ||| |||||||||| ||||||||||||||||||||||||||||||||||||||||  |||||||    
T  10447 acatctcataacaaaaacaagaacaatcagaagtgaattcatcaacaacaacattatacttcgccaattt 10516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 201 - 260
Target Start/End: Original strand, 10572 - 10630
Alignment:
Q  201 caacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagcta 260  Q
    |||||||||||| ||||||||||||||||||||||||||| ||||  |||||||||||||    
T  10572 caacaactacaatgttaaaccctttttcagaattatacaa-ccatctttagagaaagcta 10630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 175 - 278
Target Start/End: Complemental strand, 38543 - 38441
Alignment:
Q  175 cctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttacc 274  Q
    ||||| |||||||||||||||||||  |||||||||||  |||||||||||||||||||||||  || ||| |||| |||| | || |||||||||||||    
T  38543 cctaacttctataacatcaaaactattaacaactacaaaattaaaccctttttcagaattata-tactcatgattaaagaaggttagtcacacccttacc 38445  T
Q  275 ttag 278  Q
    ||||    
T  38444 ttag 38441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 48; Significance: 2e-18; HSPs: 3)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 199 - 278
Target Start/End: Complemental strand, 35264 - 35185
Alignment:
Q  199 aacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttag 278  Q
    ||||||||| || | |||||||||||||| ||||||||||||||||||||||| |||||||| |  ||||||||||||||    
T  35264 aacaacaacaaccatgttaaacccttttttagaattatacaacccattattagggaaagctagtaccacccttaccttag 35185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 166 - 273
Target Start/End: Complemental strand, 35597 - 35490
Alignment:
Q  166 aaatctaaccctaatttctataac-atcaaaa-ctaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattc 263  Q
    ||||| || |||||||||| |||| ||||||| | ||||||||| || | |||||||||| ||||||||||||| ||||||| ||||||| |||||| ||    
T  35597 aaatcaaaacctaatttctctaaccatcaaaatcaaacaacaacaaccatgttaaaccctatttcagaattata-aacccatcattagag-aagctaatc 35500  T
Q  264 acacccttac 273  Q
     |||||||||    
T  35499 ccacccttac 35490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 199 - 273
Target Start/End: Complemental strand, 35413 - 35341
Alignment:
Q  199 aacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttac 273  Q
    ||||||||| || | |||||||||| ||||||||||||| ||||||| ||||||| |||||| || |||||||||    
T  35413 aacaacaacaaccatgttaaaccctatttcagaattata-aacccatcattagag-aagctaatcccacccttac 35341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 175 - 278
Target Start/End: Original strand, 3155 - 3257
Alignment:
Q  175 cctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttacc 274  Q
    ||||| ||||||||||||||||||| ||||||||||||  ||||||||||||||| |||||||  || ||| |||| |||| | || || ||||||||||    
T  3155 cctaacttctataacatcaaaactatcaacaactacaaaattaaaccctttttcataattata-tactcatgattaaagaaggttagtcccacccttacc 3253  T
Q  275 ttag 278  Q
    ||||    
T  3254 ttag 3257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0730 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0730
Description:

Target: scaffold0730; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 214 - 288
Target Start/End: Complemental strand, 6568 - 6494
Alignment:
Q  214 gttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgat 288  Q
    ||||||||| |||||||||| ||||||||||||||||||||||| || || | || ||||||||| |||||||||    
T  6568 gttaaaccccttttcagaatcatacaacccattattagagaaaggtagtcccgcctttaccttagattagatgat 6494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 166 - 278
Target Start/End: Complemental strand, 43898 - 43786
Alignment:
Q  166 aaatctaaccctaatttctataa-catcaaaa-ctaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattc 263  Q
    ||||| || |||||||||| ||| |||||||| |||| |||||| || | |||||||||| ||||||||||||| ||||||||||||||| |||||| ||    
T  43898 aaatcaaaacctaatttctctaatcatcaaaatctaataacaacaaccatgttaaaccctatttcagaattata-aacccattattagag-aagctagtc 43801  T
Q  264 acacccttaccttag 278  Q
     ||||||||||||||    
T  43800 ccacccttaccttag 43786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 172 - 321
Target Start/End: Original strand, 33402 - 33550
Alignment:
Q  172 aaccctaatttctataacatcaaaac-taacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacaccct 270  Q
    |||||||||| ||| ||||||||||| ||  |||||||||| | |||||||||||||||| |||| | | |  || |||| |||| | || || ||||||    
T  33402 aaccctaatt-ctacaacatcaaaacctattaacaactacacgtttaaaccctttttcaggattaaata-cttatgattaaagaaggttagtcccaccct 33499  T
Q  271 taccttaggttagatgatcgcaaggtcctaccgctttctcttctctgactc 321  Q
    |||||||| ||   |||||||||||| ||||||||||||||||||||||||    
T  33500 taccttagattgattgatcgcaaggttctaccgctttctcttctctgactc 33550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 2)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 265 - 321
Target Start/End: Original strand, 57013 - 57069
Alignment:
Q  265 cacccttaccttaggttagatgatcgcaaggtcctaccgctttctcttctctgactc 321  Q
    |||||||||||||||||| |||||||| |||| ||||| ||||||||||||||||||    
T  57013 cacccttaccttaggttatatgatcgccaggttctaccactttctcttctctgactc 57069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 214 - 278
Target Start/End: Complemental strand, 68789 - 68725
Alignment:
Q  214 gttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttag 278  Q
    ||||||||| |||| ||||| ||| ||||||||||||||||||| || || ||||||||||||||    
T  68789 gttaaacccgtttttagaatcatataacccattattagagaaaggtagtcccacccttaccttag 68725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0394 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0394
Description:

Target: scaffold0394; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 175 - 278
Target Start/End: Complemental strand, 7615 - 7513
Alignment:
Q  175 cctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttacc 274  Q
    ||||| ||||||||||||||||||| ||||||||| ||  ||||||||||||||||||| |||  || ||| |||| |||| | || || ||||||||||    
T  7615 cctaacttctataacatcaaaactatcaacaactataaaattaaaccctttttcagaatcata-tactcataattaaagaaggttagtcccacccttacc 7517  T
Q  275 ttag 278  Q
    ||||    
T  7516 ttag 7513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 175 - 321
Target Start/End: Original strand, 49680 - 49826
Alignment:
Q  175 cctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttacc 274  Q
    ||||| ||||||||||||||||||| ||||||  | ||  ||||||||||||||||||||||   || ||| |||| |||| | || || ||||||||||    
T  49680 cctaacttctataacatcaaaactatcaacaaaaataaaattaaaccctttttcagaattat-ggactcatgattaaagaaggttagtcccacccttacc 49778  T
Q  275 ttaggttagatgatcgcaaggtcctac-cgctttctcttctctgactc 321  Q
    |||| || | ||||  |||||| ||||  |||||||||||||||||||    
T  49779 ttagattggttgattacaaggttctacaagctttctcttctctgactc 49826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 171 - 237
Target Start/End: Original strand, 28660 - 28726
Alignment:
Q  171 taaccctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattata 237  Q
    ||||||||||| ||||||||  |||||||  |||||||||||| |||||| ||||||||||||||||    
T  28660 taaccctaattcctataacaataaaactattaacaactacaagattaaacgctttttcagaattata 28726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 2)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 175 - 237
Target Start/End: Original strand, 17057 - 17118
Alignment:
Q  175 cctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattata 237  Q
    |||||||||||||| |||||| ||| |||||||||||| |||||||||||||| |||||||||    
T  17057 cctaatttctataatatcaaa-ctatcaacaactacaaagttaaaccctttttaagaattata 17118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 175 - 237
Target Start/End: Original strand, 26588 - 26649
Alignment:
Q  175 cctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattata 237  Q
    |||||||||||||| |||||| ||| |||||||||||| |||||||||||||| |||||||||    
T  26588 cctaatttctataatatcaaa-ctatcaacaactacaaagttaaaccctttttaagaattata 26649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1939 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold1939
Description:

Target: scaffold1939; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 171 - 232
Target Start/End: Original strand, 74 - 135
Alignment:
Q  171 taaccctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaa 232  Q
    ||||||||| |||||||||||||||||||  |||||||||||  | ||||||||||||||||    
T  74 taaccctaacttctataacatcaaaactattaacaactacaaattaaaaccctttttcagaa 135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0462 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0462
Description:

Target: scaffold0462; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 172 - 221
Target Start/End: Original strand, 1264 - 1313
Alignment:
Q  172 aaccctaatttctataacatcaaaactaacaacaactacaaggttaaacc 221  Q
    |||||| ||||||||||||||||||||| ||||||||| |||||||||||    
T  1264 aacccttatttctataacatcaaaactatcaacaactataaggttaaacc 1313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0462; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 172 - 221
Target Start/End: Original strand, 6770 - 6819
Alignment:
Q  172 aaccctaatttctataacatcaaaactaacaacaactacaaggttaaacc 221  Q
    |||||| ||||||||||||||||||||| ||||||||| |||||||||||    
T  6770 aacccttatttctataacatcaaaactatcaacaactataaggttaaacc 6819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 175 - 278
Target Start/End: Complemental strand, 5718 - 5615
Alignment:
Q  175 cctaatttctataa-catcaaaa-ctaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacaccctta 272  Q
    |||||||||| ||| |||||||| | ||||||||| || | |||||| ||| ||||||||||||| ||||||||||||||| |||||| || ||||||||    
T  5718 cctaatttctctaatcatcaaaatcaaacaacaacaaccatgttaaatcctatttcagaattata-aacccattattagag-aagctagtcccaccctta 5621  T
Q  273 ccttag 278  Q
    ||||||    
T  5620 ccttag 5615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 225 - 321
Target Start/End: Complemental strand, 12585 - 12482
Alignment:
Q  225 tttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcg-------caaggtcctaccgctttctcttctctg 317  Q
    |||||||||||||||||  |  ||||||||||| ||||| |||||||||||| | |||||||||||       |||| | ||||||||||||||||||||    
T  12585 tttcagaattatacaacttagaattagagaaagttattcccacccttaccttggattagatgatcggactctacaagattctaccgctttctcttctctg 12486  T
Q  318 actc 321  Q
    ||||    
T  12485 actc 12482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 224 - 288
Target Start/End: Original strand, 8843 - 8907
Alignment:
Q  224 ttttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgat 288  Q
    |||||||||| |||||| ||||||||||| ||||||| || |||||||| ||||| |||||||||    
T  8843 ttttcagaatcatacaatccattattagataaagctagtcccacccttaacttagattagatgat 8907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 169 - 229
Target Start/End: Complemental strand, 438 - 377
Alignment:
Q  169 tctaaccctaatttctataa-catcaaaactaacaacaactacaaggttaaaccctttttca 229  Q
    |||||||||||||||| ||| | ||||| ||||| ||||||||||||||||||| |||||||    
T  438 tctaaccctaatttctctaatcctcaaacctaacgacaactacaaggttaaaccatttttca 377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0183 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0183
Description:

Target: scaffold0183; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 79 - 168
Target Start/End: Original strand, 11227 - 11316
Alignment:
Q  79 accaatttaatccacaataatcactttatacaaatatgcacttatgggtagaagtagaaaaagagattatacaaaagattatgaatgaaa 168  Q
    ||||||| ||| |||||||||||||||  ||||||| |||||| ||  |  ||| | |||| ||||||||||||| ||||||||||||||    
T  11227 accaattaaattcacaataatcacttttcacaaataagcacttttgaatttaagaaaaaaaggagattatacaaacgattatgaatgaaa 11316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 34; Significance: 0.0000000005; HSPs: 3)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 225 - 290
Target Start/End: Original strand, 31994 - 32059
Alignment:
Q  225 tttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcg 290  Q
    |||||||||||||||||  |  ||||||||||| || ||||||||||||||||  |||||||||||    
T  31994 tttcagaattatacaacttagaattagagaaagttagtcacacccttaccttaaattagatgatcg 32059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 225 - 290
Target Start/End: Original strand, 37301 - 37366
Alignment:
Q  225 tttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcg 290  Q
    |||||||||||||||||  |  ||||||||||| || ||||||||||||||||  |||||||||||    
T  37301 tttcagaattatacaacttagaattagagaaagttagtcacacccttaccttaaattagatgatcg 37366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 289
Target Start/End: Original strand, 77687 - 77751
Alignment:
Q  225 tttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatc 289  Q
    |||||||||||||||||  |  ||||||||||| || || |||||||||||||| ||||||||||    
T  77687 tttcagaattatacaacttagaattagagaaagttagtctcacccttaccttagattagatgatc 77751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 235
Target Start/End: Original strand, 174169 - 174232
Alignment:
Q  172 aaccctaatttctataacatcaaaac-taacaacaactacaaggttaaaccctttttcagaatta 235  Q
    |||||||||| ||| ||||||||||| ||  ||||||||||||||||||||||||||||| ||||    
T  174169 aaccctaatt-ctacaacatcaaaacctattaacaactacaaggttaaaccctttttcaggatta 174232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 225 - 277
Target Start/End: Original strand, 143611 - 143663
Alignment:
Q  225 tttcagaattatacaacccattattagagaaagctattcacacccttacctta 277  Q
    |||||||||||||||||  |  ||||||||||| || ||||||||||||||||    
T  143611 tttcagaattatacaacttagaattagagaaagttagtcacacccttacctta 143663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1800 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold1800
Description:

Target: scaffold1800; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 175 - 278
Target Start/End: Original strand, 558 - 660
Alignment:
Q  175 cctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttacc 274  Q
    ||||| |||||||||||||||| || ||||||| ||||  ||||||| ||||| |||||||||  || ||| |||| |||| | || || ||||||||||    
T  558 cctaacttctataacatcaaaattatcaacaacaacaaaattaaaccatttttaagaattata-gactcatgattaaagaaggttagtcccacccttacc 656  T
Q  275 ttag 278  Q
    ||||    
T  657 ttag 660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0461 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0461
Description:

Target: scaffold0461; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 172 - 203
Target Start/End: Original strand, 12433 - 12464
Alignment:
Q  172 aaccctaatttctataacatcaaaactaacaa 203  Q
    ||||||||||||||||||||||||||||||||    
T  12433 aaccctaatttctataacatcaaaactaacaa 12464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 171 - 229
Target Start/End: Original strand, 29257 - 29316
Alignment:
Q  171 taaccctaatttctataacatcaaaac-taacaacaactacaaggttaaaccctttttca 229  Q
    ||||| |||| ||| |||||||||||| ||  ||||||||||||||||||||||||||||    
T  29257 taaccttaatctctttaacatcaaaacctattaacaactacaaggttaaaccctttttca 29316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 175 - 233
Target Start/End: Original strand, 31880 - 31938
Alignment:
Q  175 cctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaat 233  Q
    ||||| ||||| |||||||||||||  |||||||| ||  |||||||||||||||||||    
T  31880 cctaacttctacaacatcaaaactattaacaactataaaattaaaccctttttcagaat 31938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 321
Target Start/End: Complemental strand, 26687 - 26589
Alignment:
Q  224 ttttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcgcaaggtcctac-cgctttctcttctctgactc 321  Q
    ||||||||||||||||||| |  |||| |||||| || || ||||||||| |||| || | ||||  |||||| ||||  |||||||||||||||||||    
T  26687 ttttcagaattatacaacctaaaattaaagaaagttaatcccacccttactttagattggttgattacaaggttctacaagctttctcttctctgactc 26589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1633 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold1633
Description:

Target: scaffold1633; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 290
Target Start/End: Original strand, 1205 - 1270
Alignment:
Q  225 tttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcg 290  Q
    |||||||||||||||||  |  ||||||||||| || || |||||||||||||  |||||||||||    
T  1205 tttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcg 1270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0956 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0956
Description:

Target: scaffold0956; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 290
Target Start/End: Original strand, 2555 - 2620
Alignment:
Q  225 tttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcg 290  Q
    |||||||||||||||||  |  ||||||||||| || || |||||||||| ||| |||||||||||    
T  2555 tttcagaattatacaacttagaattagagaaagttagtcccacccttaccgtagattagatgatcg 2620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 278
Target Start/End: Original strand, 2889 - 2942
Alignment:
Q  225 tttcagaattatacaacccattattagagaaagctattcacacccttaccttag 278  Q
    |||||||||||||||||| |  ||||||||||| || || ||||||||||||||    
T  2889 tttcagaattatacaacctaaaattagagaaagttaatcccacccttaccttag 2942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 172
Target Start/End: Original strand, 13406 - 13488
Alignment:
Q  91 cacaataatcactttatacaaatatgcacttatgggtagaagtagaaaaagagattataca--aaagattatgaatgaaatcta 172  Q
    ||||||||| ||||| |||||||| |||||| ||  || |||||||||| |||||||||    |||||||||||||||||||||    
T  13406 cacaataataactttttacaaataagcacttttgaatataagtagaaaa-gagattataacttaaagattatgaatgaaatcta 13488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 290
Target Start/End: Original strand, 79049 - 79114
Alignment:
Q  225 tttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcg 290  Q
    |||||||||||||||||  |  ||||||||||| || || |||||||||||||  |||||||||||    
T  79049 tttcagaattatacaacttagaattagagaaagttagtctcacccttaccttaaattagatgatcg 79114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 290
Target Start/End: Complemental strand, 78237 - 78172
Alignment:
Q  225 tttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcg 290  Q
    |||||||||||||||||  |  ||||||||||| || || |||||||||||||  |||||||||||    
T  78237 tttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcg 78172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 290
Target Start/End: Complemental strand, 24183 - 24118
Alignment:
Q  225 tttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcg 290  Q
    |||||||||||||||||  |  ||||||||||| || || |||||||||||||  |||||||||||    
T  24183 tttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcg 24118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1283 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold1283
Description:

Target: scaffold1283; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 225 - 289
Target Start/End: Complemental strand, 520 - 456
Alignment:
Q  225 tttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatc 289  Q
    |||||||||||||||||  |  ||||||||||| || || |||||||||||||  ||||||||||    
T  520 tttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatc 456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0630 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0630
Description:

Target: scaffold0630; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 172 - 235
Target Start/End: Original strand, 9011 - 9074
Alignment:
Q  172 aaccctaatttctataacatcaaaac-taacaacaactacaaggttaaaccctttttcagaatta 235  Q
    |||||||||| ||| ||||||||||| ||  |||||||||||| |||||||||||||||| ||||    
T  9011 aaccctaatt-ctacaacatcaaaacctattaacaactacaagattaaaccctttttcaggatta 9074  T

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Target: scaffold0371 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0371
Description:

Target: scaffold0371; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 172 - 235
Target Start/End: Complemental strand, 10550 - 10487
Alignment:
Q  172 aaccctaatttctataacatcaaaac-taacaacaactacaaggttaaaccctttttcagaatta 235  Q
    |||||||||| ||| ||||||||||| ||  ||||||||||| ||||||||||||||||| ||||    
T  10550 aaccctaatt-ctacaacatcaaaacctattaacaactacaatgttaaaccctttttcaggatta 10487  T

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Target: scaffold0145 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0145
Description:

Target: scaffold0145; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 186 - 229
Target Start/End: Original strand, 8085 - 8129
Alignment:
Q  186 taacatcaaaac-taacaacaactacaaggttaaaccctttttca 229  Q
    |||||||||||| ||  ||||||||||||||||||||||||||||    
T  8085 taacatcaaaacctattaacaactacaaggttaaaccctttttca 8129  T

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Target: scaffold0063 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 172 - 235
Target Start/End: Original strand, 62666 - 62729
Alignment:
Q  172 aaccctaatttctataacatcaaaac-taacaacaactacaaggttaaaccctttttcagaatta 235  Q
    |||||||||| ||| ||||||||||| ||  |||||| |||||||||||||||||||||| ||||    
T  62666 aaccctaatt-ctacaacatcaaaacctattaacaaccacaaggttaaaccctttttcaggatta 62729  T

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