View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12662_low_5 (Length: 242)

Name: NF12662_low_5
Description: NF12662
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12662_low_5
NF12662_low_5
[»] chr4 (8 HSPs)
chr4 (1-231)||(21833776-21834006)
chr4 (33-154)||(1755035-1755156)
chr4 (49-154)||(641483-641588)
chr4 (41-182)||(3438082-3438223)
chr4 (1-154)||(55908120-55908273)
chr4 (52-110)||(53761306-53761364)
chr4 (41-154)||(547470-547583)
chr4 (41-182)||(1600930-1601071)
[»] chr3 (3 HSPs)
chr3 (1-188)||(51763838-51764025)
chr3 (58-225)||(13470184-13470351)
chr3 (76-217)||(514192-514333)
[»] chr6 (2 HSPs)
chr6 (1-218)||(6588721-6588941)
chr6 (57-225)||(6416446-6416614)
[»] chr5 (4 HSPs)
chr5 (1-225)||(28532191-28532421)
chr5 (33-154)||(32268029-32268150)
chr5 (107-231)||(41889049-41889173)
chr5 (40-145)||(41900966-41901071)
[»] chr1 (2 HSPs)
chr1 (1-154)||(19467897-19468050)
chr1 (57-154)||(17352198-17352295)
[»] chr7 (3 HSPs)
chr7 (1-208)||(10169528-10169735)
chr7 (1-208)||(10177053-10177260)
chr7 (60-231)||(10615067-10615238)
[»] chr2 (1 HSPs)
chr2 (63-154)||(1037118-1037209)
[»] chr8 (1 HSPs)
chr8 (40-100)||(27922699-27922759)


Alignment Details
Target: chr4 (Bit Score: 223; Significance: 1e-123; HSPs: 8)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 21833776 - 21834006
Alignment:
Q  1 gtttgaagggtttgacttgtcttagtttgcgttctttgtatatctcggatgagttactctactctattgcaagggaaggtcttcctttaacgaggcttgt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21833776 gtttgaagggtttgacttgtcttagtttgcgttctttgtatatcttggatgagttactctactctattgcaagggaaggtcttcctttaacgaggcttgt 21833875  T
Q  101 ccttcgaaattgcaccggctatagttatgatggaatcttttgtttgttatccaaaggtcatggtgtccaacatttggatcttgaagataacatgtttctg 200  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21833876 ccttcgaaaatgcaccggctatagttatgatggaatcttttgtttgttatccaaaggtcatggtgtccaacatttggatcttgaagataacatgtttctg 21833975  T
Q  201 aatgatcaacatgttgtccagttgtattcat 231  Q
    |||||||||||||||||||||||||||||||    
T  21833976 aatgatcaacatgttgtccagttgtattcat 21834006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 33 - 154
Target Start/End: Complemental strand, 1755156 - 1755035
Alignment:
Q  33 tctttgtatatctcggatgagttactctactctattgcaagggaaggtcttcctttaacgaggcttgtccttcgaaattgcaccggctatagttatgatg 132  Q
    |||||| |||||||||||||| | || ||||||||||||| | || |||||||||| | ||||||||| ||| || ||||||||||||||||||||||||    
T  1755156 tctttgaatatctcggatgagctgctgtactctattgcaatgaaaagtcttcctttgaagaggcttgtgcttggacattgcaccggctatagttatgatg 1755057  T
Q  133 gaatcttttgtttgttatccaa 154  Q
    |||||   ||||||||||||||    
T  1755056 gaatccgatgtttgttatccaa 1755035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 49 - 154
Target Start/End: Complemental strand, 641588 - 641483
Alignment:
Q  49 atgagttactctactctattgcaagggaaggtcttcctttaacgaggcttgtccttcgaaattgcaccggctatagttatgatggaatcttttgtttgtt 148  Q
    ||||||| |||| ||||||||||| | |||| |||||||| ||||| ||||||||  | |||||||||||||||| ||||||||||||||| ||||||||    
T  641588 atgagtttctctcctctattgcaatgaaaggccttcctttgacgagacttgtcctctgcaattgcaccggctatacttatgatggaatcttgtgtttgtt 641489  T
Q  149 atccaa 154  Q
    ||||||    
T  641488 atccaa 641483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 41 - 182
Target Start/End: Original strand, 3438082 - 3438223
Alignment:
Q  41 tatctcggatgagttactctactctattgcaagggaaggtcttcctttaacgaggcttgtccttcgaaattgcaccggctatagttatgatggaatcttt 140  Q
    |||| ||||||| ||||| | |||||||||||  | |||||||||||| |  ||||||||||| |  |||||||||||||||||||||| || |||||||    
T  3438082 tatcccggatgaattactttcctctattgcaattggaggtcttcctttgagaaggcttgtcctccacaattgcaccggctatagttatgctgaaatcttt 3438181  T
Q  141 tgtttgttatccaaaggtcatggtgtccaacatttggatctt 182  Q
    | | ||||||||||  ||||  || | |||||||||||||||    
T  3438182 tctctgttatccaagtgtcaatgtatacaacatttggatctt 3438223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 55908120 - 55908273
Alignment:
Q  1 gtttgaagggtttgacttgtcttagtttgcgttctttgtatatctcggatgagttactctactctattgcaagggaaggtcttcctttaacgaggcttgt 100  Q
    ||||||| || || |||||||||| ||||   ||||||   ||||||||||| || || |  |||||||||| || |||||||||||| |  || |||||    
T  55908120 gtttgaatggcttaacttgtcttaatttgtcgtctttgcgcatctcggatgaattgcttttttctattgcaatgggaggtcttcctttgagaagacttgt 55908219  T
Q  101 ccttcgaaattgcaccggctatagttatgatggaatcttttgtttgttatccaa 154  Q
    ||| | ||||||||||||||||| ||||| |||||| |  | ||||||||||||    
T  55908220 cctccaaaattgcaccggctataattatgttggaatatactctttgttatccaa 55908273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 110
Target Start/End: Original strand, 53761306 - 53761364
Alignment:
Q  52 agttactctactctattgcaagggaaggtcttcctttaacgaggcttgtccttcgaaat 110  Q
    |||| |||||||||||||||| |||| |||||||||| || || |||||||||| ||||    
T  53761306 agttgctctactctattgcaaaggaatgtcttcctttgacaagtcttgtccttcaaaat 53761364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 41 - 154
Target Start/End: Complemental strand, 547583 - 547470
Alignment:
Q  41 tatctcggatgagttactctactctattgcaagggaaggtcttcctttaacgaggcttgtccttcgaaattgcaccggctatagttatgatggaatcttt 140  Q
    ||||||||||  ||| |||| ||||||||||| ||||| | ||||||| |  | ||||||||| | ||||||   |||||||||||||| |||||| | |    
T  547583 tatctcggatatgttgctctcctctattgcaatggaagctattcctttgagaaagcttgtcctccaaaattgtttcggctatagttatgctggaatatct 547484  T
Q  141 tgtttgttatccaa 154  Q
    ||||| || |||||    
T  547483 tgttttttgtccaa 547470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 41 - 182
Target Start/End: Complemental strand, 1601071 - 1600930
Alignment:
Q  41 tatctcggatgagttactctactctattgcaagggaaggtcttcctttaacgaggcttgtccttcgaaattgcaccggctatagttatgatggaatcttt 140  Q
    |||||||||| |||| |||| ||||||||||| ||||  || |||||| | |||||||| |||   | ||| ||| ||||||||||||  |||| |  ||    
T  1601071 tatctcggatcagttgctctcctctattgcaaaggaaaatcctcctttgaggaggcttgacctcgcatatttcactggctatagttatattggagtagtt 1600972  T
Q  141 tgtttgttatccaaaggtcatggtgtccaacatttggatctt 182  Q
     |||||||||||||  ||||  || |||||||||||| ||||    
T  1600971 agtttgttatccaagtgtcaacgtatccaacatttggttctt 1600930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 64; Significance: 4e-28; HSPs: 3)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 188
Target Start/End: Original strand, 51763838 - 51764025
Alignment:
Q  1 gtttgaagggtttgacttgtcttagtttgcgttctttgtatatctcggatgagttactctactctattgcaagggaaggtcttcctttaacgaggcttgt 100  Q
    |||||||||||||||||| ||||  ||||     |||| | ||||| |||||||| |||||||| ||||||||||||||||||| ||| |  ||||||||    
T  51763838 gtttgaagggtttgacttctcttgatttgaagcgtttgaaaatctctgatgagttgctctactcgattgcaagggaaggtcttcttttgaaaaggcttgt 51763937  T
Q  101 ccttcgaaattgcaccggctatagttatgatggaatcttttgtttgttatccaaaggtcatggtgtccaacatttggatcttgaagat 188  Q
    ||||| || |||||| ||||||||||||| ||||||| |||||||| |||||||  ||||  || |  |||||||||||||| |||||    
T  51763938 ccttcaaatttgcacgggctatagttatgctggaatcatttgtttggtatccaactgtcaacgtttgaaacatttggatcttcaagat 51764025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 58 - 225
Target Start/End: Original strand, 13470184 - 13470351
Alignment:
Q  58 tctactctattgcaagggaaggtcttcctttaacgaggcttgtccttcgaaattgcaccgg---ctatagttatgatggaatcttttgtttgttatccaa 154  Q
    |||||| |||||||||||||||||||||||| |||||| ||| ||| ||| ||||    ||   | ||||||||| |||||| ||| |||||||||||||    
T  13470184 tctactgtattgcaagggaaggtcttcctttgacgaggtttgccctccgacattgttttggcccccatagttatgctggaatatttcgtttgttatccaa 13470283  T
Q  155 aggtcatggtgtccaacatttggatcttgaagataacatgtttctgaatgatcaacatgttgtccagttgt 225  Q
      |||| ||  |||||||||| ||||||||   |    ||||||||||||||||||||||| |||| ||||    
T  13470284 gtgtcaaggcatccaacatttagatcttgagctt---ttgtttctgaatgatcaacatgttctccaattgt 13470351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 76 - 217
Target Start/End: Original strand, 514192 - 514333
Alignment:
Q  76 aaggtcttcctttaacgaggcttgtccttcgaaattgcaccggctatagttatgatggaatcttttgtttgttatccaaaggtcatggtgtccaacattt 175  Q
    ||||||||||||||| ||| ||||| || || | ||| ||||||||  | |||||||||||||||| ||||||||||||| || |  |  | ||||||||    
T  514192 aaggtcttcctttaaggagacttgtgctccgtagttgtaccggctacggctatgatggaatcttttctttgttatccaaatgtaaatggatacaacattt 514291  T
Q  176 ggatcttgaagataacatgtttctgaatgatcaacatgttgt 217  Q
    | ||||| |||||  | | || || |||||||||||||||||    
T  514292 gaatcttcaagatgcccttttcctcaatgatcaacatgttgt 514333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 63; Significance: 2e-27; HSPs: 2)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 218
Target Start/End: Original strand, 6588721 - 6588941
Alignment:
Q  1 gtttgaagggtttgacttgtcttagtttgcgttctttgtatatctcggatgagttactctactctattgcaagggaaggtcttcctttaacgaggcttgt 100  Q
    |||||||| |||||||||||||| |||||  | ||||| ||||||| |||||||| |||||| ||||||||||| || |||||||||| || || |||||    
T  6588721 gtttgaagagtttgacttgtcttggtttgtctgctttgaatatctccgatgagttgctctacactattgcaaggaaacgtcttcctttgacaagacttgt 6588820  T
Q  101 ccttcgaaattgcaccggctatagttatgatggaatcttttgtttgttatccaaaggtcatg---gtgtccaacatttggatcttgaagataacatgttt 197  Q
     ||   | ||||  | |||  |  |||| ||||| |||||| |||||||||||   |||||    || ||||||||||||||||||||||||| | ||||    
T  6588821 actcaaatattgttctggccgttattataatggactcttttatttgttatccatgtgtcataaaagtttccaacatttggatcttgaagataataggttt 6588920  T
Q  198 ctgaatgatcaacatgttgtc 218  Q
    |||||||||||||||||||||    
T  6588921 ctgaatgatcaacatgttgtc 6588941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 57 - 225
Target Start/End: Complemental strand, 6416614 - 6416446
Alignment:
Q  57 ctctactctattgcaagggaaggtcttcctttaacgaggcttgtccttcgaaattgcaccgg---ctatagttatgatggaatcttttgtttgttatcca 153  Q
    ||||||| |||||||||||||||||||||||| |||||| ||  ||| ||| ||||    ||   | |||||| || |||||| ||| ||||||||||||    
T  6416614 ctctactgtattgcaagggaaggtcttcctttgacgaggtttaccctccgacattgttttggcccccatagttctgctggaatatttcgtttgttatcca 6416515  T
Q  154 aaggtcatggtgtccaacatttggatcttgaagataacatgtttctgaatgatcaacatgttgtccagttgt 225  Q
    |  |||| ||  ||||||||||| ||||||||  |     |||||| |||||||||||||||||||| ||||    
T  6416514 agtgtcaaggcatccaacatttgaatcttgaactt---tcgtttcttaatgatcaacatgttgtccaattgt 6416446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 56; Significance: 2e-23; HSPs: 4)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 28532421 - 28532191
Alignment:
Q  1 gtttgaagggtttgacttgtcttagtttgcgttctttgtatatctcggatgagttactctactctattgcaagggaaggtcttcctttaacgaggcttgt 100  Q
    |||| |||||||||||||||||| |||||  || |||  |||| || |||||||| |||||| |||||||||||| |||||||||||| |  | ||||||    
T  28532421 gtttcaagggtttgacttgtcttggtttgtattattttaatatttctgatgagttgctctacactattgcaaggggaggtcttcctttgataaagcttgt 28532322  T
Q  101 ccttcgaaattgcaccggctatagttatgatggaatcttttgtttgttatccaa------aggtcatggtgtccaacatttggatcttgaagataacatg 194  Q
    |||   |||| ||   |||||||||||||| ||| |||||||||||||||||||      | |||| ||| ||| ||||||| || ||| |  ||  | |    
T  28532321 cctaaaaaatcgctggggctatagttatgacggactcttttgtttgttatccaagtgtcgacgtcaaggtttccgacatttgtatattggacttagtaag 28532222  T
Q  195 tttctgaatgatcaacatgttgtccagttgt 225  Q
    ||||||||||||||||||||| |||||||||    
T  28532221 tttctgaatgatcaacatgttatccagttgt 28532191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 33 - 154
Target Start/End: Complemental strand, 32268150 - 32268029
Alignment:
Q  33 tctttgtatatctcggatgagttactctactctattgcaagggaaggtcttcctttaacgaggcttgtccttcgaaattgcaccggctatagttatgatg 132  Q
    |||||| ||||||| |||||||| |||| ||||||||||    || |||||||||| ||||||||||| || | | |||||||||||||||| |||  ||    
T  32268150 tctttgaatatctcagatgagttgctctcctctattgcataccaatgtcttcctttgacgaggcttgttctccaagattgcaccggctatagctattctg 32268051  T
Q  133 gaatcttttgtttgttatccaa 154  Q
    ||||| ||| |||  |||||||    
T  32268050 gaatcctttctttactatccaa 32268029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 107 - 231
Target Start/End: Original strand, 41889049 - 41889173
Alignment:
Q  107 aaattgcaccggctatagttatgatggaatcttttgtttgttatccaaaggtcatggtgtccaacatttggatcttgaagataacatgtttctgaatgat 206  Q
    |||||||||||||| |||||||| |||||||||||||||  |||||||  || |   | |||||| |||||||||| || |||   | ||||||||| ||    
T  41889049 aaattgcaccggctttagttatgctggaatcttttgtttactatccaagtgtgaacatatccaacttttggatcttcaaaatattgtttttctgaatcat 41889148  T
Q  207 caacatgttgtccagttgtattcat 231  Q
     ||||||||||  |||||| |||||    
T  41889149 aaacatgttgtggagttgtcttcat 41889173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 40 - 145
Target Start/End: Original strand, 41900966 - 41901071
Alignment:
Q  40 atatctcggatgagttactctactctattgcaagggaaggtcttcctttaacgaggcttgtccttcgaaattgcaccggctatagttatgatggaatctt 139  Q
    ||||||| |||| ||| |||  |||||||||||   ||||||| ||||| || |||||||| || | |||||||||||| |||||||||  ||||||  |    
T  41900966 atatctcagatgtgtttctcatctctattgcaatccaaggtctacctttgactaggcttgttctccaaaattgcaccggttatagttattctggaattat 41901065  T
Q  140 ttgttt 145  Q
    ||||||    
T  41901066 ttgttt 41901071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 50; Significance: 9e-20; HSPs: 2)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 19467897 - 19468050
Alignment:
Q  1 gtttgaagggtttgacttgtcttagtttgcgttctttgtatatctcggatgagttactctactctattgcaagggaaggtcttcctttaacgaggcttgt 100  Q
    |||||||||||||||||| ||||| || | | | | || ||||||| |||||  | ||||||||||||||| ||||||| || ||||| |||||||||||    
T  19467897 gtttgaagggtttgacttctcttacttggtggtttctgaatatctctgatgaaatgctctactctattgcacgggaagggctacctttgacgaggcttgt 19467996  T
Q  101 ccttcgaaattgcaccggctatagttatgatggaatcttttgtttgttatccaa 154  Q
    |||   | |||||   ||| |||| |||| ||||||||||||||||||||||||    
T  19467997 cctcaaatattgctttggccatagctatgctggaatcttttgtttgttatccaa 19468050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 57 - 154
Target Start/End: Complemental strand, 17352295 - 17352198
Alignment:
Q  57 ctctactctattgcaagggaaggtcttcctttaacgaggcttgtccttcgaaattgcaccggctatagttatgatggaatcttttgtttgttatccaa 154  Q
    |||| ||||||||||| ||| ||| ||||||| | ||| |||||||||| | ||| ||| ||||| ||||||| |||||  |||| ||||||||||||    
T  17352295 ctctcctctattgcaaaggagggttttcctttcaggagacttgtccttcaatattccactggctacagttatgctggaactttttctttgttatccaa 17352198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 48; Significance: 1e-18; HSPs: 3)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 208
Target Start/End: Original strand, 10169528 - 10169735
Alignment:
Q  1 gtttgaagggtttgacttgtcttagtttgcgttctttgtatatctcggatgagttactctactctattgcaagggaaggtcttcctttaacgaggcttgt 100  Q
    |||||||||||||||||| ||||  |||| | ||| || ||||||| |||||  | |||||||||||||| ||||||||||| ||||| ||||||||||     
T  10169528 gtttgaagggtttgacttctctttctttgagatctctggatatctctgatgaaatgctctactctattgcgagggaaggtctacctttgacgaggcttgc 10169627  T
Q  101 ccttcgaaattgcaccggctatagttatgatggaatcttttgtttgttatccaaaggtcatggtgtccaacatttggatcttgaagataacatgtttctg 200  Q
    |||  || |||||   | ||| || |||| ||||||||||||||||| ||| ||  |||  ||| | |||||  ||||||||||| ||  ||| || |||    
T  10169628 cctcagatattgcttggactaaagctatgctggaatcttttgtttgtcatctaagtgtcgaggtttgcaacacatggatcttgaacatgccattttcctg 10169727  T
Q  201 aatgatca 208  Q
    ||||||||    
T  10169728 aatgatca 10169735  T

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Target: chr7; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 208
Target Start/End: Original strand, 10177053 - 10177260
Alignment:
Q  1 gtttgaagggtttgacttgtcttagtttgcgttctttgtatatctcggatgagttactctactctattgcaagggaaggtcttcctttaacgaggcttgt 100  Q
    |||||||||||||||||| ||||  |||| | ||| || ||||||| |||||  | |||||||||||||| ||||||||||| ||||| ||||||||||     
T  10177053 gtttgaagggtttgacttctctttctttgagatctctggatatctctgatgaaatgctctactctattgcgagggaaggtctacctttgacgaggcttgc 10177152  T
Q  101 ccttcgaaattgcaccggctatagttatgatggaatcttttgtttgttatccaaaggtcatggtgtccaacatttggatcttgaagataacatgtttctg 200  Q
    |||  || |||||   | ||| || |||| ||||||||||||||||| ||| ||  |||  ||| | |||||  ||||||||||| ||  ||| || |||    
T  10177153 cctcagatattgcttggactaaagctatgctggaatcttttgtttgtcatctaagtgtcgaggtttgcaacacatggatcttgaacatgccattttcctg 10177252  T
Q  201 aatgatca 208  Q
    ||||||||    
T  10177253 aatgatca 10177260  T

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Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 60 - 231
Target Start/End: Complemental strand, 10615238 - 10615067
Alignment:
Q  60 tactctattgcaagggaaggtcttcctttaacgaggcttgtccttcgaaattgcaccggcta---tagttatgatggaatcttttgtttgttatccaaag 156  Q
    ||||||||||||||||  ||||||||||| |||||| ||  ||| ||| ||||   |||| |   |||||||| |||||||| |||||| ||||||||      
T  10615238 tactctattgcaagggtgggtcttcctttgacgaggtttaccctccgacattgtttcggccaccatagttatgctggaatctattgtttattatccaagt 10615139  T
Q  157 gtcatggtgtccaacatttggatcttgaagataacatgtttctgaatgatcaacatgttgtccagttgtattcat 231  Q
    |||| ||  ||||||||||||||||||||  |     ||||||||||||||||||||||||||| |||| |||||    
T  10615138 gtcaaggcttccaacatttggatcttgaactt---ccgtttctgaatgatcaacatgttgtccaattgtcttcat 10615067  T

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Target: chr2 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 63 - 154
Target Start/End: Original strand, 1037118 - 1037209
Alignment:
Q  63 tctattgcaagggaaggtcttcctttaacgaggcttgtccttcgaaattgcaccggctatagttatgatggaatcttttgtttgttatccaa 154  Q
    |||||||||| || |||||||||||| |  || |||||||| | |||||||||| |||||| ||||| |||||| |  | ||||||||||||    
T  1037118 tctattgcaatgggaggtcttcctttgagaagacttgtcctccaaaattgcaccagctataattatgttggaatatactctttgttatccaa 1037209  T

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Target: chr8 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 100
Target Start/End: Complemental strand, 27922759 - 27922699
Alignment:
Q  40 atatctcggatgagttactctactctattgcaagggaaggtcttcctttaacgaggcttgt 100  Q
    |||||||||||||||| |||| ||||||||| |  ||| |||| ||||| |||||||||||    
T  27922759 atatctcggatgagttgctctcctctattgccaccgaacgtctacctttgacgaggcttgt 27922699  T

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