View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12665_high_3 (Length: 490)

Name: NF12665_high_3
Description: NF12665
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12665_high_3
NF12665_high_3
[»] chr1 (63 HSPs)
chr1 (19-471)||(46895801-46896256)
chr1 (147-267)||(19547034-19547154)
chr1 (149-248)||(34582657-34582756)
chr1 (147-233)||(18032190-18032276)
chr1 (159-284)||(14758572-14758697)
chr1 (147-246)||(44584056-44584155)
chr1 (159-260)||(26297716-26297820)
chr1 (16-73)||(3815054-3815111)
chr1 (170-255)||(26765978-26766063)
chr1 (152-247)||(38294014-38294110)
chr1 (147-246)||(14890492-14890590)
chr1 (16-71)||(37008218-37008273)
chr1 (16-70)||(12074958-12075012)
chr1 (16-70)||(40877003-40877057)
chr1 (19-68)||(23953111-23953160)
chr1 (159-260)||(30529367-30529468)
chr1 (147-284)||(44920219-44920356)
chr1 (147-246)||(14892041-14892139)
chr1 (25-72)||(40876700-40876747)
chr1 (16-74)||(12075271-12075329)
chr1 (147-249)||(18038894-18038996)
chr1 (159-241)||(41649899-41649981)
chr1 (25-75)||(45719715-45719765)
chr1 (16-73)||(367177-367234)
chr1 (16-73)||(7196969-7197026)
chr1 (155-200)||(9500924-9500969)
chr1 (16-73)||(15788409-15788466)
chr1 (24-73)||(21258918-21258967)
chr1 (16-73)||(41915780-41915837)
chr1 (23-72)||(46895437-46895486)
chr1 (25-74)||(49696932-49696981)
chr1 (24-73)||(51549406-51549455)
chr1 (24-72)||(7058389-7058437)
chr1 (24-72)||(7196676-7196724)
chr1 (147-203)||(26533765-26533821)
chr1 (16-75)||(366883-366942)
chr1 (18-73)||(10532214-10532269)
chr1 (16-74)||(4476199-4476257)
chr1 (16-73)||(6129624-6129682)
chr1 (24-73)||(50504816-50504866)
chr1 (16-73)||(3814759-3814816)
chr1 (147-224)||(6983018-6983095)
chr1 (17-74)||(24491154-24491211)
chr1 (147-212)||(25095610-25095675)
chr1 (16-73)||(50503700-50503757)
chr1 (16-72)||(2350094-2350150)
chr1 (24-72)||(7159507-7159555)
chr1 (16-72)||(15911960-15912016)
chr1 (193-257)||(46729219-46729283)
chr1 (19-74)||(35580736-35580791)
chr1 (24-74)||(1712368-1712418)
chr1 (24-74)||(39276964-39277014)
chr1 (20-62)||(44743731-44743773)
chr1 (25-70)||(4474757-4474802)
chr1 (26-75)||(11932934-11932983)
chr1 (24-73)||(26811452-26811501)
chr1 (147-216)||(36331618-36331687)
chr1 (16-69)||(41611244-41611297)
chr1 (24-69)||(43117258-43117303)
chr1 (24-73)||(51462180-51462228)
chr1 (15-75)||(4059519-4059579)
chr1 (24-72)||(12061586-12061634)
chr1 (16-72)||(49695350-49695406)
[»] chr5 (43 HSPs)
chr5 (150-267)||(11010248-11010365)
chr5 (150-248)||(40944271-40944369)
chr5 (16-73)||(42585985-42586042)
chr5 (16-74)||(22471954-22472012)
chr5 (16-73)||(6464333-6464390)
chr5 (16-73)||(36361032-36361089)
chr5 (24-74)||(128252-128302)
chr5 (16-73)||(20126437-20126494)
chr5 (154-287)||(42877252-42877385)
chr5 (147-266)||(248447-248567)
chr5 (16-73)||(20364681-20364738)
chr5 (24-73)||(38162592-38162641)
chr5 (19-75)||(7611071-7611127)
chr5 (179-255)||(18988786-18988862)
chr5 (16-74)||(42586345-42586403)
chr5 (23-69)||(43355721-43355767)
chr5 (16-53)||(20126676-20126713)
chr5 (162-243)||(22528740-22528821)
chr5 (161-284)||(16980752-16980876)
chr5 (19-71)||(26366085-26366137)
chr5 (19-75)||(36361422-36361478)
chr5 (147-202)||(26663636-26663691)
chr5 (147-202)||(26935231-26935286)
chr5 (16-75)||(38163673-38163732)
chr5 (16-74)||(3999084-3999142)
chr5 (19-69)||(7611428-7611478)
chr5 (19-73)||(10331955-10332009)
chr5 (19-69)||(13428138-13428188)
chr5 (16-74)||(38973326-38973383)
chr5 (19-73)||(39049016-39049070)
chr5 (16-73)||(15204288-15204344)
chr5 (16-73)||(24242016-24242073)
chr5 (147-248)||(35947644-35947745)
chr5 (24-73)||(37887671-37887720)
chr5 (147-248)||(42265437-42265538)
chr5 (159-215)||(4857273-4857329)
chr5 (16-72)||(6815500-6815556)
chr5 (188-236)||(14328455-14328503)
chr5 (179-247)||(15206500-15206568)
chr5 (15-67)||(15885135-15885187)
chr5 (15-75)||(16900994-16901054)
chr5 (17-73)||(17441155-17441211)
chr5 (25-73)||(31874118-31874166)
[»] chr3 (61 HSPs)
chr3 (154-289)||(21813119-21813254)
chr3 (147-249)||(29212701-29212803)
chr3 (16-73)||(3193039-3193096)
chr3 (24-73)||(17258196-17258245)
chr3 (16-73)||(33944867-33944924)
chr3 (147-243)||(36494176-36494273)
chr3 (147-268)||(40629093-40629214)
chr3 (16-73)||(54476042-54476099)
chr3 (24-72)||(2181315-2181363)
chr3 (159-255)||(49682180-49682276)
chr3 (16-71)||(37755195-37755250)
chr3 (24-75)||(40988595-40988646)
chr3 (24-74)||(5636673-5636723)
chr3 (16-70)||(51453544-51453597)
chr3 (16-73)||(50380154-50380211)
chr3 (16-73)||(51224925-51224982)
chr3 (16-73)||(53255282-53255339)
chr3 (24-72)||(53254963-53255011)
chr3 (24-75)||(32770648-32770699)
chr3 (27-70)||(33445781-33445824)
chr3 (32-75)||(40989672-40989715)
chr3 (20-75)||(46336043-46336098)
chr3 (16-70)||(17256570-17256624)
chr3 (159-249)||(32606385-32606475)
chr3 (24-74)||(50764197-50764246)
chr3 (147-248)||(7278169-7278270)
chr3 (25-74)||(10732414-10732463)
chr3 (159-232)||(39144981-39145054)
chr3 (16-69)||(42686485-42686538)
chr3 (17-74)||(44457445-44457502)
chr3 (16-73)||(48907292-48907349)
chr3 (24-73)||(50381572-50381621)
chr3 (24-72)||(33447237-33447285)
chr3 (24-72)||(35495213-35495261)
chr3 (17-73)||(43040443-43040499)
chr3 (166-237)||(3383356-3383427)
chr3 (24-71)||(32831161-32831208)
chr3 (16-71)||(33943535-33943590)
chr3 (24-71)||(36315790-36315837)
chr3 (166-241)||(46895927-46896002)
chr3 (147-202)||(53040470-53040525)
chr3 (24-74)||(1807438-1807488)
chr3 (19-69)||(6128512-6128562)
chr3 (15-53)||(8338959-8338997)
chr3 (159-217)||(31294383-31294441)
chr3 (24-74)||(54477335-54477385)
chr3 (147-200)||(2831548-2831601)
chr3 (24-73)||(3354951-3355000)
chr3 (158-227)||(25095464-25095533)
chr3 (16-73)||(28204479-28204536)
chr3 (16-73)||(46934245-46934302)
chr3 (16-73)||(49001649-49001706)
chr3 (24-73)||(49002767-49002816)
chr3 (24-69)||(51226516-51226561)
chr3 (25-74)||(53764573-53764622)
chr3 (16-73)||(54716475-54716532)
chr3 (159-255)||(3973826-3973922)
chr3 (16-72)||(5635348-5635404)
chr3 (17-73)||(19975547-19975603)
chr3 (24-72)||(32772046-32772094)
chr3 (16-71)||(49075562-49075618)
[»] chr8 (70 HSPs)
chr8 (147-246)||(12787849-12787948)
chr8 (147-249)||(10565346-10565448)
chr8 (147-246)||(44042538-44042637)
chr8 (147-249)||(4166496-4166598)
chr8 (16-74)||(14170420-14170478)
chr8 (19-74)||(23475622-23475677)
chr8 (16-75)||(35795589-35795648)
chr8 (23-75)||(27225778-27225830)
chr8 (16-72)||(45308454-45308510)
chr8 (16-74)||(755901-755959)
chr8 (16-70)||(35795219-35795273)
chr8 (159-248)||(4507917-4508006)
chr8 (16-73)||(17512096-17512153)
chr8 (16-69)||(23936282-23936335)
chr8 (147-248)||(24457828-24457929)
chr8 (170-249)||(6904192-6904271)
chr8 (14-73)||(26889292-26889351)
chr8 (27-72)||(17512456-17512501)
chr8 (159-288)||(20142403-20142532)
chr8 (16-73)||(45522449-45522506)
chr8 (20-72)||(6041089-6041141)
chr8 (20-72)||(6044721-6044773)
chr8 (180-260)||(14237162-14237242)
chr8 (27-74)||(11289315-11289362)
chr8 (24-75)||(12278832-12278883)
chr8 (17-72)||(34602014-34602069)
chr8 (163-214)||(39312194-39312245)
chr8 (16-59)||(45163718-45163761)
chr8 (25-71)||(5916348-5916394)
chr8 (16-70)||(12280359-12280413)
chr8 (24-74)||(18650929-18650979)
chr8 (16-74)||(44807332-44807390)
chr8 (24-73)||(756123-756172)
chr8 (24-69)||(2802651-2802696)
chr8 (16-73)||(2803006-2803063)
chr8 (16-73)||(5180694-5180751)
chr8 (16-69)||(7010926-7010979)
chr8 (17-74)||(27453124-27453181)
chr8 (147-248)||(34336477-34336578)
chr8 (24-72)||(20788034-20788082)
chr8 (17-73)||(27453534-27453590)
chr8 (159-255)||(33285922-33286018)
chr8 (159-287)||(43238106-43238234)
chr8 (25-72)||(8952829-8952876)
chr8 (150-257)||(41105993-41106100)
chr8 (208-259)||(41646611-41646662)
chr8 (24-75)||(45309587-45309638)
chr8 (24-74)||(8409831-8409880)
chr8 (19-73)||(9498908-9498962)
chr8 (16-50)||(26889649-26889683)
chr8 (159-237)||(32332866-32332944)
chr8 (152-250)||(40464410-40464508)
chr8 (16-74)||(41487198-41487256)
chr8 (25-74)||(521709-521758)
chr8 (24-73)||(1003811-1003859)
chr8 (15-52)||(4423049-4423086)
chr8 (147-212)||(5020092-5020157)
chr8 (16-69)||(5916914-5916967)
chr8 (16-73)||(10285102-10285158)
chr8 (15-64)||(12723269-12723318)
chr8 (21-70)||(17075016-17075065)
chr8 (21-70)||(17573205-17573254)
chr8 (16-73)||(20853377-20853434)
chr8 (16-73)||(31947853-31947910)
chr8 (157-201)||(2335799-2335843)
chr8 (24-72)||(8347551-8347599)
chr8 (25-69)||(14170704-14170748)
chr8 (16-72)||(18539133-18539188)
chr8 (17-73)||(34602435-34602491)
chr8 (25-73)||(41602878-41602926)
[»] chr4 (56 HSPs)
chr4 (147-248)||(46506326-46506429)
chr4 (147-246)||(19652634-19652733)
chr4 (159-248)||(7388788-7388877)
chr4 (159-260)||(38380471-38380572)
chr4 (159-284)||(38949027-38949152)
chr4 (16-71)||(1139157-1139212)
chr4 (166-237)||(40781425-40781496)
chr4 (19-73)||(13388160-13388214)
chr4 (16-74)||(53061806-53061864)
chr4 (16-73)||(31760765-31760822)
chr4 (16-73)||(41148164-41148221)
chr4 (24-72)||(53831152-53831200)
chr4 (159-250)||(32893024-32893115)
chr4 (16-71)||(33641852-33641907)
chr4 (16-75)||(49804354-49804412)
chr4 (25-71)||(8672013-8672059)
chr4 (147-233)||(24916382-24916468)
chr4 (16-74)||(51542942-51543000)
chr4 (163-248)||(5047221-5047306)
chr4 (20-73)||(21552919-21552972)
chr4 (24-73)||(38828507-38828556)
chr4 (158-255)||(41370165-41370262)
chr4 (16-69)||(47742234-47742287)
chr4 (16-69)||(47742602-47742655)
chr4 (14-74)||(6033899-6033959)
chr4 (24-72)||(30064002-30064050)
chr4 (147-255)||(49011880-49011988)
chr4 (25-73)||(53578922-53578970)
chr4 (24-74)||(1140631-1140682)
chr4 (21-72)||(6979688-6979739)
chr4 (24-71)||(8143034-8143081)
chr4 (16-71)||(8144384-8144439)
chr4 (24-74)||(14816873-14816924)
chr4 (147-202)||(30978698-30978753)
chr4 (25-72)||(55318047-55318094)
chr4 (16-74)||(3369845-3369903)
chr4 (154-232)||(23133068-23133146)
chr4 (15-53)||(27018461-27018499)
chr4 (19-73)||(30627034-30627088)
chr4 (163-233)||(31871074-31871144)
chr4 (179-249)||(36721589-36721659)
chr4 (159-217)||(40071322-40071380)
chr4 (20-74)||(53312547-53312601)
chr4 (16-74)||(53831318-53831375)
chr4 (24-69)||(5548019-5548064)
chr4 (16-69)||(31761860-31761913)
chr4 (24-73)||(35393935-35393984)
chr4 (19-72)||(36413968-36414021)
chr4 (16-69)||(37831595-37831648)
chr4 (173-246)||(40062309-40062382)
chr4 (16-73)||(44121045-44121102)
chr4 (172-241)||(50247943-50248012)
chr4 (153-237)||(23016237-23016321)
chr4 (24-72)||(29776885-29776933)
chr4 (25-73)||(35830312-35830360)
chr4 (147-247)||(40480175-40480275)
[»] scaffold0172 (1 HSPs)
scaffold0172 (159-266)||(13478-13585)
[»] chr7 (58 HSPs)
chr7 (16-73)||(7873508-7873565)
chr7 (16-72)||(10691298-10691354)
chr7 (19-73)||(30283405-30283459)
chr7 (16-73)||(282859-282916)
chr7 (16-73)||(327436-327493)
chr7 (16-69)||(10691647-10691700)
chr7 (147-267)||(6771838-6771958)
chr7 (24-72)||(29933190-29933238)
chr7 (159-257)||(3298231-3298329)
chr7 (24-74)||(7873897-7873947)
chr7 (16-74)||(43078061-43078119)
chr7 (159-288)||(44319819-44319948)
chr7 (16-72)||(24679102-24679158)
chr7 (19-74)||(21954335-21954390)
chr7 (16-70)||(9477448-9477502)
chr7 (16-74)||(42438034-42438092)
chr7 (16-74)||(43092038-43092096)
chr7 (16-73)||(21939332-21939389)
chr7 (24-69)||(26974233-26974278)
chr7 (24-73)||(29933539-29933588)
chr7 (147-224)||(36061530-36061607)
chr7 (152-201)||(39170331-39170380)
chr7 (17-73)||(5490924-5490980)
chr7 (147-246)||(24557734-24557833)
chr7 (15-75)||(27869193-27869253)
chr7 (16-72)||(31530376-31530432)
chr7 (19-75)||(40139821-40139877)
chr7 (24-72)||(42436829-42436877)
chr7 (15-74)||(20636865-20636924)
chr7 (19-74)||(21202862-21202917)
chr7 (16-59)||(30283723-30283766)
chr7 (19-74)||(30503704-30503759)
chr7 (162-257)||(31902744-31902839)
chr7 (16-75)||(33159481-33159540)
chr7 (16-75)||(46266511-46266570)
chr7 (16-74)||(18201352-18201410)
chr7 (147-241)||(34681693-34681787)
chr7 (16-74)||(40139527-40139585)
chr7 (20-62)||(47909605-47909647)
chr7 (16-73)||(1449982-1450039)
chr7 (17-74)||(5490502-5490559)
chr7 (159-248)||(6707891-6707980)
chr7 (25-74)||(9477131-9477180)
chr7 (24-69)||(9500168-9500213)
chr7 (147-248)||(17883317-17883418)
chr7 (147-224)||(22739463-22739540)
chr7 (24-73)||(24432335-24432384)
chr7 (147-248)||(26402786-26402887)
chr7 (24-72)||(30505147-30505196)
chr7 (147-244)||(41898255-41898352)
chr7 (24-73)||(46199052-46199101)
chr7 (159-206)||(2699270-2699317)
chr7 (147-231)||(5495991-5496075)
chr7 (147-246)||(6775232-6775331)
chr7 (16-72)||(10385706-10385762)
chr7 (16-72)||(11742915-11742971)
chr7 (16-72)||(20505267-20505323)
chr7 (163-211)||(38452188-38452236)
[»] chr2 (62 HSPs)
chr2 (159-260)||(32770762-32770863)
chr2 (147-246)||(27921891-27921991)
chr2 (16-73)||(14816055-14816112)
chr2 (148-267)||(18734354-18734473)
chr2 (19-72)||(4856709-4856762)
chr2 (20-73)||(8740153-8740206)
chr2 (159-260)||(32438074-32438175)
chr2 (24-72)||(11363882-11363930)
chr2 (16-75)||(28719314-28719373)
chr2 (19-69)||(8740449-8740498)
chr2 (151-249)||(11580424-11580522)
chr2 (24-74)||(12802470-12802520)
chr2 (16-73)||(52297-52354)
chr2 (16-69)||(21631821-21631874)
chr2 (24-72)||(14815698-14815746)
chr2 (16-72)||(15023096-15023152)
chr2 (148-260)||(36260429-36260541)
chr2 (23-74)||(9780950-9781001)
chr2 (24-75)||(14983966-14984017)
chr2 (158-201)||(25093866-25093909)
chr2 (20-75)||(35500037-35500092)
chr2 (19-69)||(4423780-4423830)
chr2 (16-74)||(36286411-36286469)
chr2 (16-74)||(39374387-39374445)
chr2 (16-73)||(23280888-23280945)
chr2 (147-248)||(29260331-29260432)
chr2 (17-74)||(29825018-29825074)
chr2 (16-73)||(35500349-35500406)
chr2 (24-73)||(39672687-39672735)
chr2 (24-69)||(44078555-44078600)
chr2 (16-72)||(10857339-10857395)
chr2 (24-68)||(23049830-23049874)
chr2 (17-61)||(29370727-29370771)
chr2 (147-199)||(29865825-29865877)
chr2 (16-72)||(32661692-32661748)
chr2 (16-75)||(2755207-2755266)
chr2 (193-248)||(7933341-7933396)
chr2 (159-218)||(11252722-11252781)
chr2 (24-71)||(17850500-17850547)
chr2 (24-75)||(43890097-43890148)
chr2 (24-74)||(4423420-4423469)
chr2 (24-74)||(8030124-8030174)
chr2 (147-237)||(8964393-8964483)
chr2 (147-241)||(9153486-9153579)
chr2 (15-73)||(11176154-11176212)
chr2 (16-70)||(11188308-11188362)
chr2 (31-73)||(21633340-21633382)
chr2 (16-74)||(32661402-32661460)
chr2 (171-241)||(33617966-33618036)
chr2 (159-257)||(33962938-33963036)
chr2 (16-74)||(43741759-43741816)
chr2 (24-74)||(44618003-44618053)
chr2 (16-73)||(10741335-10741392)
chr2 (16-73)||(20650369-20650426)
chr2 (24-73)||(21024726-21024775)
chr2 (16-73)||(23048289-23048346)
chr2 (16-73)||(23685822-23685878)
chr2 (15-64)||(28851673-28851722)
chr2 (24-73)||(34600546-34600595)
chr2 (16-52)||(16143687-16143723)
chr2 (19-71)||(28451640-28451692)
chr2 (17-69)||(42274782-42274833)
[»] chr6 (30 HSPs)
chr6 (16-74)||(12203890-12203948)
chr6 (147-247)||(5678476-5678576)
chr6 (16-72)||(11624306-11624362)
chr6 (16-72)||(28574564-28574620)
chr6 (17-74)||(2173878-2173935)
chr6 (16-72)||(11623159-11623215)
chr6 (16-72)||(22517491-22517547)
chr6 (147-266)||(10570928-10571047)
chr6 (16-70)||(2018575-2018629)
chr6 (20-74)||(9070131-9070185)
chr6 (25-75)||(12798724-12798774)
chr6 (16-52)||(2078186-2078222)
chr6 (16-75)||(12766472-12766531)
chr6 (20-74)||(4792294-4792348)
chr6 (147-241)||(6586428-6586522)
chr6 (24-74)||(22515971-22516021)
chr6 (19-72)||(30369784-30369837)
chr6 (180-244)||(1252754-1252818)
chr6 (16-75)||(4037035-4037094)
chr6 (16-74)||(1897136-1897194)
chr6 (24-74)||(2017170-2017220)
chr6 (19-69)||(7504883-7504933)
chr6 (16-74)||(14168975-14169033)
chr6 (25-72)||(29874470-29874519)
chr6 (16-73)||(238929-238986)
chr6 (180-245)||(1243372-1243437)
chr6 (19-72)||(2538983-2539036)
chr6 (24-73)||(4793842-4793891)
chr6 (179-224)||(7465510-7465555)
chr6 (16-52)||(10582156-10582192)
[»] scaffold0286 (1 HSPs)
scaffold0286 (17-74)||(20106-20163)
[»] scaffold0633 (1 HSPs)
scaffold0633 (159-241)||(5015-5097)
[»] scaffold0027 (1 HSPs)
scaffold0027 (154-260)||(122457-122563)
[»] scaffold0016 (1 HSPs)
scaffold0016 (25-73)||(199665-199713)
[»] scaffold0854 (2 HSPs)
scaffold0854 (16-71)||(3385-3440)
scaffold0854 (24-71)||(1844-1891)
[»] scaffold2010 (1 HSPs)
scaffold2010 (16-74)||(491-549)
[»] scaffold0001 (1 HSPs)
scaffold0001 (16-73)||(405452-405508)
[»] scaffold0009 (1 HSPs)
scaffold0009 (170-225)||(25585-25640)
[»] scaffold0007 (1 HSPs)
scaffold0007 (20-75)||(201304-201359)
[»] scaffold0005 (1 HSPs)
scaffold0005 (24-74)||(22787-22838)
[»] scaffold1301 (1 HSPs)
scaffold1301 (16-74)||(1305-1363)
[»] scaffold0182 (1 HSPs)
scaffold0182 (36-74)||(21164-21201)
[»] scaffold0028 (2 HSPs)
scaffold0028 (16-74)||(32267-32325)
scaffold0028 (16-72)||(31979-32035)
[»] scaffold0019 (1 HSPs)
scaffold0019 (24-74)||(122595-122645)
[»] scaffold0725 (1 HSPs)
scaffold0725 (25-73)||(6698-6746)
[»] scaffold0246 (1 HSPs)
scaffold0246 (147-247)||(18114-18214)


Alignment Details
Target: chr1 (Bit Score: 350; Significance: 0; HSPs: 63)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 350; E-Value: 0
Query Start/End: Original strand, 19 - 471
Target Start/End: Original strand, 46895801 - 46896256
Alignment:
Q  19 ggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagccttannnnnnncattgattacaaagcgacaatgaaatatacaagggt 118  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||       | ||||||||||||||||||||||||||||||||||    
T  46895801 ggggtcaaaatcgcaacttcttgaaacatagggggccaaaactgcaattaagccttatttttttcgttgattacaaagcgacaatgaaatatacaagggt 46895900  T
Q  119 ttt---gttaataggtgttcttaaggtact-gttaaggattctaaattaagaaattatttattgaaaaagtctaatatttcaatttccgatccattgaat 214  Q
    |||   |||||||||||||| ||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  46895901 ttttttgttaataggtgttcctaaggtacttgttaaagattctaaattaagaaattatttattgaaaaagtctaatatttcaatttccgatgcattgaat 46896000  T
Q  215 gcataaatttcaataaaaacttactatctaaagtccgtaaagaatgaccttagaaaactccttaacattttccaatatacaaatatgcttagttgacaac 314  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||| |||||||||||||||||||||||||||||    
T  46896001 gcataaatttctataaaaacttactatctaaagtccgtaaagaatgaccttaaaaaactcattaacatttcccaatatacaaatatgcttagttgacaac 46896100  T
Q  315 atagcgacgactattttatttaaggctccttccaaaaaactagtttatttaaaataaaatgaatctacttataaatgtattctccaagtagtcattttca 414  Q
    ||||||||||||||||||||||| ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  46896101 atagcgacgactattttatttaaagctccttcc-aaaaactaatttatttaaaataaaatgaatctacttataaatgtattctcgaagtagtcattttca 46896199  T
Q  415 attaacatcgttgtattattttctaaaattaggataacttcatgaaataatcaataa 471  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||    
T  46896200 attaacatcgttgtattattatctaaaattaggataacttcatgaaataaccaataa 46896256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 147 - 267
Target Start/End: Complemental strand, 19547154 - 19547034
Alignment:
Q  147 ttaaggattctaaattaagaaattatttattgaaaaagtctaatatttcaatttccgatccattgaatgcataaatttcaataaaaacttactatctaaa 246  Q
    ||||||||||  || |||||||||||| |||||||| ||| |||| ||||||| ||||| ||||||||||| || |||| ||||||||||||||| ||||    
T  19547154 ttaaggattcccaagtaagaaattattcattgaaaatgtccaatacttcaattcccgatgcattgaatgcacaagtttctataaaaacttactatataaa 19547055  T
Q  247 gtccgtaaagaatgaccttag 267  Q
    |||| |||||| || ||||||    
T  19547054 gtccttaaagagtgcccttag 19547034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 149 - 248
Target Start/End: Original strand, 34582657 - 34582756
Alignment:
Q  149 aaggattctaaattaagaaattatttattgaaaaagtctaatatttcaatttccgatccattgaatgcataaatttcaataaaaacttactatctaaagt 248  Q
    ||||||| |||||||| |||||||| | ||||||||| ||||  ||||||||| ||| |||||||||||||| |||  ||||||||||||||||||||||    
T  34582657 aaggattttaaattaaaaaattattcaatgaaaaagtataatgcttcaatttctgatgcattgaatgcataagttttcataaaaacttactatctaaagt 34582756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 147 - 233
Target Start/End: Original strand, 18032190 - 18032276
Alignment:
Q  147 ttaaggattctaaattaagaaattatttattgaaaaagtctaatatttcaatttccgatccattgaatgcataaatttcaataaaaa 233  Q
    |||| |||||| ||||||||||||||||||||||||||| ||||  ||||||||||||| |||| ||||||||| |||| |||||||    
T  18032190 ttaaagattctgaattaagaaattatttattgaaaaagtttaatgcttcaatttccgatgcattaaatgcataagtttccataaaaa 18032276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 159 - 284
Target Start/End: Original strand, 14758572 - 14758697
Alignment:
Q  159 aattaagaaattatttattgaaaaagtctaatatttcaatttccgatccattgaatgcataaatttcaataaaaacttactatctaaagtccgtaaagaa 258  Q
    |||||||||||||||  || ||||||| ||| |||||||||| |||| ||||||||||| || |||  ||||||| ||||||| |||||||| ||||||     
T  14758572 aattaagaaattattccttaaaaaagtttaacatttcaattttcgatgcattgaatgcacaatttttcataaaaatttactatttaaagtccttaaagag 14758671  T
Q  259 tgaccttagaaaactccttaacattt 284  Q
    || |||||||  |||| |||||||||    
T  14758672 tgtccttagagcactcgttaacattt 14758697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 147 - 246
Target Start/End: Complemental strand, 44584155 - 44584056
Alignment:
Q  147 ttaaggattctaaattaagaaattatttattgaaaaagtctaatatttcaatttccgatccattgaatgcataaatttcaataaaaacttactatctaaa 246  Q
    ||||||| |||||||||||||| ||||| ||||||||||||||| ||||||||| | ||  ||| |||||| || |||  ||||||||||||||||||||    
T  44584155 ttaaggaatctaaattaagaaactatttgttgaaaaagtctaatgtttcaattttcaatgtattaaatgcacaagttttcataaaaacttactatctaaa 44584056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 159 - 260
Target Start/End: Original strand, 26297716 - 26297820
Alignment:
Q  159 aattaagaaattatttattgaaaaagtctaatatttcaatttccgatccattgaa---tgcataaatttcaataaaaacttactatctaaagtccgtaaa 255  Q
    ||||| |||| |||| ||||||||||  ||||||||||||||||||| ||| |||   |||| || |||| |||||||||||||||||||||||| ||||    
T  26297716 aattatgaaactattcattgaaaaagcttaatatttcaatttccgatgcatagaagaatgcacaagtttctataaaaacttactatctaaagtccttaaa 26297815  T
Q  256 gaatg 260  Q
    |||||    
T  26297816 gaatg 26297820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 3815054 - 3815111
Alignment:
Q  16 tagggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcct 73  Q
    ||||||| ||||||||||||||||||||||||||||| |||||||||| |||||||||    
T  3815054 tagggggccaaaatcgcaacttcttgaaacataggggttcaaaactgctattaagcct 3815111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 170 - 255
Target Start/End: Original strand, 26765978 - 26766063
Alignment:
Q  170 tatttattgaaaaagtctaatatttcaatttccgatccattgaatgcataaatttcaataaaaacttactatctaaagtccgtaaa 255  Q
    |||| ||||||||||| ||||||||||||||| |||  ||||||||||||| |||  ||| |||||||||||||||||||| ||||    
T  26765978 tattcattgaaaaagtttaatatttcaatttctgatggattgaatgcataagtttttatataaacttactatctaaagtccttaaa 26766063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 152 - 247
Target Start/End: Original strand, 38294014 - 38294110
Alignment:
Q  152 gattctaaattaagaaattatttattgaaaaagtctaa-tatttcaatttccgatccattgaatgcataaatttcaataaaaacttactatctaaag 247  Q
    ||||||||||||||||||| || || |||||||| ||| ||||| ||||||| || ||||||||||| || |||| ||||||||||||||| |||||    
T  38294014 gattctaaattaagaaattgttcatagaaaaagtataaatattttaatttccaatgcattgaatgcacaagtttctataaaaacttactatttaaag 38294110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 147 - 246
Target Start/End: Complemental strand, 14890590 - 14890492
Alignment:
Q  147 ttaaggattctaaattaagaaattatttattgaaaaagtctaatatttcaatttccgatccattgaatgcataaatttcaataaaaacttactatctaaa 246  Q
    ||||||||||| |||||| |||||||| |||||||||   ||||| ||||||||||||| ||||||||||| ||||||| ||  ||| ||||||||||||    
T  14890590 ttaaggattcttaattaaaaaattattaattgaaaaaacttaatacttcaatttccgatacattgaatgcacaaatttctat-caaatttactatctaaa 14890492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 16 - 71
Target Start/End: Complemental strand, 37008273 - 37008218
Alignment:
Q  16 tagggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagc 71  Q
    ||||||| |||||||||||||||||||||||||||||| ||||||||| |||||||    
T  37008273 tagggggccaaaatcgcaacttcttgaaacatagggggccaaaactgctattaagc 37008218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 16 - 70
Target Start/End: Complemental strand, 12075012 - 12074958
Alignment:
Q  16 tagggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaag 70  Q
    |||||||||||||||||||||||||||||||||||| | ||||||||| ||||||    
T  12075012 tagggggtcaaaatcgcaacttcttgaaacatagggagccaaaactgctattaag 12074958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 16 - 70
Target Start/End: Original strand, 40877003 - 40877057
Alignment:
Q  16 tagggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaag 70  Q
    ||||||| |||||||||||||||||| ||||||||||| ||||||||||||||||    
T  40877003 tagggggccaaaatcgcaacttcttggaacatagggggccaaaactgcaattaag 40877057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 68
Target Start/End: Original strand, 23953111 - 23953160
Alignment:
Q  19 ggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaatta 68  Q
    ||||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  23953111 ggggtcaaaatcgcaacttcttgaaacatagggggccaaaactgctatta 23953160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 159 - 260
Target Start/End: Original strand, 30529367 - 30529468
Alignment:
Q  159 aattaagaaattatttattgaaaaagtctaatatttcaatttccgatccattgaatgcataaatttcaataaaaacttactatctaaagtccgtaaagaa 258  Q
    |||||||||||||||  |||||||| | ||| | ||||||||| ||| |||| |||||| || |||| ||||||| ||||||| |||||||| |||||||    
T  30529367 aattaagaaattattctttgaaaaaatttaacacttcaatttctgatgcattaaatgcacaattttccataaaaatttactatttaaagtccttaaagaa 30529466  T
Q  259 tg 260  Q
    ||    
T  30529467 tg 30529468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 147 - 284
Target Start/End: Original strand, 44920219 - 44920356
Alignment:
Q  147 ttaaggattctaaattaagaaattatttattgaaaaagtctaatatttcaatttccgatccattgaatgcataaatttcaataaaaacttactatctaaa 246  Q
    |||||| |||| ||||||||||||||| ||| ||||||| ||| | ||||||||  ||| ||||||||||| || |||| ||||||| ||||||| | ||    
T  44920219 ttaaggtttctcaattaagaaattattcattaaaaaagtttaacacttcaatttatgatgcattgaatgcacaattttccataaaaatttactatttcaa 44920318  T
Q  247 gtccgtaaagaatgaccttagaaaactccttaacattt 284  Q
    |||| |||| | || ||||||   |||| |||||||||    
T  44920319 gtccttaaaaagtgcccttagggcactcgttaacattt 44920356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 147 - 246
Target Start/End: Complemental strand, 14892139 - 14892041
Alignment:
Q  147 ttaaggattctaaattaagaaattatttattgaaaaagtctaatatttcaatttccgatccattgaatgcataaatttcaataaaaacttactatctaaa 246  Q
    ||||||||||| |||||| |||||||| |||||||||   ||||| ||||||||||||| |||||||| || ||||||| ||  ||| ||||||||||||    
T  14892139 ttaaggattcttaattaaaaaattattaattgaaaaaacttaatacttcaatttccgatacattgaatacacaaatttctat-caaatttactatctaaa 14892041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 25 - 72
Target Start/End: Complemental strand, 40876747 - 40876700
Alignment:
Q  25 aaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcc 72  Q
    |||||| ||||||||||||| |||||||||||||||||||||||||||    
T  40876747 aaaatcacaacttcttgaaatatagggggtcaaaactgcaattaagcc 40876700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 16 - 74
Target Start/End: Original strand, 12075271 - 12075329
Alignment:
Q  16 tagggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcctt 74  Q
    ||||||| ||||||||||||||||  |||||||||||| ||||||||| ||||||||||    
T  12075271 tagggggccaaaatcgcaacttctgtaaacatagggggccaaaactgctattaagcctt 12075329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 147 - 249
Target Start/End: Original strand, 18038894 - 18038996
Alignment:
Q  147 ttaaggattctaaattaagaaattatttattgaaaaagtctaatatttcaatttccgatccattgaatgcataaatttcaataaaaacttactatctaaa 246  Q
    ||||| ||||| ||||||||||  ||  ||||||||| ||||||  ||||||||||||| |||||||| || ||||||  ||||||| ||| ||||||||    
T  18038894 ttaagtattctgaattaagaaacaatgcattgaaaaaatctaatgcttcaatttccgatgcattgaatacacaaattttcataaaaaattattatctaaa 18038993  T
Q  247 gtc 249  Q
    |||    
T  18038994 gtc 18038996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 159 - 241
Target Start/End: Original strand, 41649899 - 41649981
Alignment:
Q  159 aattaagaaattatttattgaaaaagtctaatatttcaatttccgatccattgaatgcataaatttcaataaaaacttactat 241  Q
    |||||| ||||||||  || ||||||| ||| |||||||||||| || |||||||||||||| |||| ||||||| |||||||    
T  41649899 aattaaaaaattattccttaaaaaagtttaacatttcaatttcccatgcattgaatgcataattttccataaaaatttactat 41649981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 25 - 75
Target Start/End: Original strand, 45719715 - 45719765
Alignment:
Q  25 aaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcctta 75  Q
    |||||||||||||||| ||||||||| ||||||||||||||||||| ||||    
T  45719715 aaaatcgcaacttcttaaaacataggaggtcaaaactgcaattaagtctta 45719765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 367177 - 367234
Alignment:
Q  16 tagggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcct 73  Q
    ||||||| |||||||||||| |||||||| ||||||| |||||||||| |||||||||    
T  367177 tagggggccaaaatcgcaacctcttgaaatataggggatcaaaactgctattaagcct 367234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 7196969 - 7197026
Alignment:
Q  16 tagggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcct 73  Q
    ||||| ||||||||||||||||||| ||||||| |||||| ||||||| |||||||||    
T  7196969 tagggagtcaaaatcgcaacttcttaaaacataaggggtcgaaactgctattaagcct 7197026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 155 - 200
Target Start/End: Complemental strand, 9500969 - 9500924
Alignment:
Q  155 tctaaattaagaaattatttattgaaaaagtctaatatttcaattt 200  Q
    |||||||||||||| |||||||||||||||||||||| ||||||||    
T  9500969 tctaaattaagaaactatttattgaaaaagtctaatacttcaattt 9500924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 16 - 73
Target Start/End: Complemental strand, 15788466 - 15788409
Alignment:
Q  16 tagggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcct 73  Q
    ||||||| ||| |||||||||||||||||||||| | ||| |||||||||||||||||    
T  15788466 tagggggccaatatcgcaacttcttgaaacatagagtgtcgaaactgcaattaagcct 15788409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 24 - 73
Target Start/End: Complemental strand, 21258967 - 21258918
Alignment:
Q  24 caaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcct 73  Q
    ||||||||||||||||| ||||||||| |||||||| |||||||||||||    
T  21258967 caaaatcgcaacttcttaaaacataggtggtcaaaagtgcaattaagcct 21258918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 41915780 - 41915837
Alignment:
Q  16 tagggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcct 73  Q
    |||||| |||||||||||||||||||||| |||||||  ||||||||| |||||||||    
T  41915780 taggggatcaaaatcgcaacttcttgaaatataggggaccaaaactgctattaagcct 41915837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 23 - 72
Target Start/End: Complemental strand, 46895486 - 46895437
Alignment:
Q  23 tcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcc 72  Q
    |||||||||||||||||||||| |||||||| ||||||||| ||||||||    
T  46895486 tcaaaatcgcaacttcttgaaatatagggggccaaaactgctattaagcc 46895437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 25 - 74
Target Start/End: Original strand, 49696932 - 49696981
Alignment:
Q  25 aaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcctt 74  Q
    |||||| |||||||||||||||||||||| ||||| ||||||||||||||    
T  49696932 aaaatcacaacttcttgaaacatagggggccaaaaatgcaattaagcctt 49696981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 24 - 73
Target Start/End: Original strand, 51549406 - 51549455
Alignment:
Q  24 caaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcct 73  Q
    |||||||||||||||||||||| ||||||| ||||| |||||||||||||    
T  51549406 caaaatcgcaacttcttgaaacttagggggccaaaattgcaattaagcct 51549455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 24 - 72
Target Start/End: Original strand, 7058389 - 7058437
Alignment:
Q  24 caaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcc 72  Q
    |||||||||||||||||||||||||||||| ||||| || |||||||||    
T  7058389 caaaatcgcaacttcttgaaacatagggggccaaaagtgaaattaagcc 7058437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 24 - 72
Target Start/End: Complemental strand, 7196724 - 7196676
Alignment:
Q  24 caaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcc 72  Q
    ||||||||||||||||||||| |||| ||||||||||||| ||||||||    
T  7196724 caaaatcgcaacttcttgaaatatagagggtcaaaactgctattaagcc 7196676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 147 - 203
Target Start/End: Complemental strand, 26533821 - 26533765
Alignment:
Q  147 ttaaggattctaaattaagaaattatttattgaaaaagtctaatatttcaatttccg 203  Q
    ||||||||||| ||||||||||||||  |||||||||||||||  ||||||||||||    
T  26533821 ttaaggattctcaattaagaaattatcaattgaaaaagtctaacgtttcaatttccg 26533765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 16 - 75
Target Start/End: Complemental strand, 366942 - 366883
Alignment:
Q  16 tagggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcctta 75  Q
    |||||||| ||||||  |||||||| |||||||||||| ||||||||| |||||||||||    
T  366942 tagggggttaaaatcataacttcttaaaacatagggggccaaaactgctattaagcctta 366883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 18 - 73
Target Start/End: Complemental strand, 10532269 - 10532214
Alignment:
Q  18 gggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcct 73  Q
    ||||||||||||||||||||| | | || ||||||||||||||||| |||||||||    
T  10532269 gggggtcaaaatcgcaacttcctaatacttagggggtcaaaactgctattaagcct 10532214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 16 - 74
Target Start/End: Original strand, 4476199 - 4476257
Alignment:
Q  16 tagggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcctt 74  Q
    ||||||| ||||||||||||||||| ||| |||| ||| ||||| ||||||||||||||    
T  4476199 tagggggccaaaatcgcaacttcttaaaatatagagggccaaaagtgcaattaagcctt 4476257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 6129624 - 6129682
Alignment:
Q  16 tagggggtcaaaatcgcaacttcttgaaacatagggg-gtcaaaactgcaattaagcct 73  Q
    |||||||  ||||||||||| |||| ||||||||||| |||||||||||||||||||||    
T  6129624 tagggggcaaaaatcgcaacatcttaaaacataggggggtcaaaactgcaattaagcct 6129682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 24 - 73
Target Start/End: Original strand, 50504816 - 50504866
Alignment:
Q  24 caaaatcgcaacttcttgaaacatagggggtc-aaaactgcaattaagcct 73  Q
    ||||||||||||||||| |||||||||||||| |||| |||||||||||||    
T  50504816 caaaatcgcaacttcttaaaacatagggggtcaaaaagtgcaattaagcct 50504866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 16 - 73
Target Start/End: Complemental strand, 3814816 - 3814759
Alignment:
Q  16 tagggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcct 73  Q
    ||||||| ||||||| ||||||||||||||||||||||  ||| |||| |||||||||    
T  3814816 tagggggccaaaatcacaacttcttgaaacatagggggctaaatctgctattaagcct 3814759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 147 - 224
Target Start/End: Complemental strand, 6983095 - 6983018
Alignment:
Q  147 ttaaggattctaaattaagaaattatttattgaaaaagtctaatatttcaatttccgatccattgaatgcataaattt 224  Q
    ||||| |||| |||||||||||||||| ||| ||| |||| ||||||||||||| | || ||||| || |||||||||    
T  6983095 ttaagtattccaaattaagaaattattcattaaaagagtcaaatatttcaattttcaatgcattggatacataaattt 6983018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 17 - 74
Target Start/End: Complemental strand, 24491211 - 24491154
Alignment:
Q  17 agggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcctt 74  Q
    ||||||||||||||||||||| |||||||||| ||| | |||| |||| |||||||||    
T  24491211 agggggtcaaaatcgcaactttttgaaacataagggataaaaagtgcatttaagcctt 24491154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 147 - 212
Target Start/End: Original strand, 25095610 - 25095675
Alignment:
Q  147 ttaaggattctaaattaagaaattatttattgaaaaagtctaatatttcaatttccgatccattga 212  Q
    ||||||||||||||  ||||||||||||  | |||||||| ||||||||||||| |||| ||||||    
T  25095610 ttaaggattctaaaagaagaaattatttcataaaaaagtcaaatatttcaattttcgatgcattga 25095675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 16 - 73
Target Start/End: Complemental strand, 50503757 - 50503700
Alignment:
Q  16 tagggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcct 73  Q
    ||||||| ||||||||||||||||| |||||||||||  ||||| || ||||||||||    
T  50503757 tagggggccaaaatcgcaacttcttaaaacataggggaccaaaagtgaaattaagcct 50503700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 16 - 72
Target Start/End: Original strand, 2350094 - 2350150
Alignment:
Q  16 tagggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcc 72  Q
    ||||||||||||||||||||||||| |||||||| ||  ||||||||  ||||||||    
T  2350094 tagggggtcaaaatcgcaacttcttaaaacatagaggaccaaaactgttattaagcc 2350150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 24 - 72
Target Start/End: Complemental strand, 7159555 - 7159507
Alignment:
Q  24 caaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcc 72  Q
    |||||||||||||| | |||| |||||||||||||| ||||||||||||    
T  7159555 caaaatcgcaacttttggaaagatagggggtcaaaagtgcaattaagcc 7159507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 16 - 72
Target Start/End: Original strand, 15911960 - 15912016
Alignment:
Q  16 tagggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcc 72  Q
    ||||||| |||||||||||||| |  ||| |||||||||||||| ||||||||||||    
T  15911960 tagggggccaaaatcgcaacttttgaaaaaatagggggtcaaaagtgcaattaagcc 15912016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 193 - 257
Target Start/End: Original strand, 46729219 - 46729283
Alignment:
Q  193 ttcaatttccgatccattgaatgcataaatttcaataaaaacttactatctaaagtccgtaaaga 257  Q
    ||||| ||||||| ||||||||||| || |||| ||||||| ||||||| |||||||| ||||||    
T  46729219 ttcaaattccgatgcattgaatgcacaattttccataaaaatttactatttaaagtccttaaaga 46729283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 74
Target Start/End: Complemental strand, 35580791 - 35580736
Alignment:
Q  19 ggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcctt 74  Q
    |||| |||||||||||||| | |||| |||||||| ||||| ||||||||||||||    
T  35580791 ggggccaaaatcgcaacttttggaaagatagggggccaaaagtgcaattaagcctt 35580736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 24 - 74
Target Start/End: Complemental strand, 1712418 - 1712368
Alignment:
Q  24 caaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcctt 74  Q
    |||||||||||||| |  ||| |||||||||||||| ||||||||||||||    
T  1712418 caaaatcgcaacttttgaaaagatagggggtcaaaagtgcaattaagcctt 1712368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 24 - 74
Target Start/End: Complemental strand, 39277014 - 39276964
Alignment:
Q  24 caaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcctt 74  Q
    |||||||||||||| || |||||||| ||||||||| ||||||||| ||||    
T  39277014 caaaatcgcaacttttttaaacatagagggtcaaaagtgcaattaatcctt 39276964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 20 - 62
Target Start/End: Original strand, 44743731 - 44743773
Alignment:
Q  20 gggtcaaaatcgcaacttcttgaaacatagggggtcaaaactg 62  Q
    |||||||||||||||||||| ||||||| ||||| ||||||||    
T  44743731 gggtcaaaatcgcaacttctggaaacattgggggccaaaactg 44743773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 25 - 70
Target Start/End: Complemental strand, 4474802 - 4474757
Alignment:
Q  25 aaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaag 70  Q
    ||||| |||||||||| |||||||||||| ||||| ||||||||||    
T  4474802 aaaattgcaacttcttaaaacatagggggccaaaagtgcaattaag 4474757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 26 - 75
Target Start/End: Original strand, 11932934 - 11932983
Alignment:
Q  26 aaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcctta 75  Q
    |||| |||||||||||||||||||| || | ||| |||||||||||||||    
T  11932934 aaattgcaacttcttgaaacataggaggccgaaattgcaattaagcctta 11932983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 24 - 73
Target Start/End: Complemental strand, 26811501 - 26811452
Alignment:
Q  24 caaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcct 73  Q
    |||||||||||||| |  ||| |||||||||||||| |||||||||||||    
T  26811501 caaaatcgcaacttttgaaaagatagggggtcaaaagtgcaattaagcct 26811452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 147 - 216
Target Start/End: Complemental strand, 36331687 - 36331618
Alignment:
Q  147 ttaaggattctaaattaagaaattatttattgaaaaagtctaatatttcaatttccgatccattgaatgc 216  Q
    ||||||||||  |||||||||| | ||||||||||||||  |||| |||||||| | || ||||||||||    
T  36331687 ttaaggattcctaattaagaaaatgtttattgaaaaagttaaataattcaattttcaattcattgaatgc 36331618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 41611297 - 41611244
Alignment:
Q  16 tagggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaa 69  Q
    ||||||| |||||||||||||| | |||| |||||||| ||||| |||||||||    
T  41611297 tagggggccaaaatcgcaacttttggaaaaatagggggccaaaagtgcaattaa 41611244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 24 - 69
Target Start/End: Complemental strand, 43117303 - 43117258
Alignment:
Q  24 caaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaa 69  Q
    ||||||||||||||||||||||||||| ||  |||||||| |||||    
T  43117303 caaaatcgcaacttcttgaaacataggtggctaaaactgctattaa 43117258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 24 - 73
Target Start/End: Complemental strand, 51462228 - 51462180
Alignment:
Q  24 caaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcct 73  Q
    ||||||||||||||||||||||||| |||| ||||| | |||||||||||    
T  51462228 caaaatcgcaacttcttgaaacata-ggggccaaaagtacaattaagcct 51462180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 15 - 75
Target Start/End: Complemental strand, 4059579 - 4059519
Alignment:
Q  15 atagggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcctta 75  Q
    |||||||| |||||||||||| | |||||||||||||||  |||| |||| || |||||||    
T  4059579 atagggggccaaaatcgcaacattttgaaacatagggggcgaaaagtgcactttagcctta 4059519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 24 - 72
Target Start/End: Complemental strand, 12061634 - 12061586
Alignment:
Q  24 caaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcc 72  Q
    |||||||||||||| | |||| |||| ||||||||| ||||||||||||    
T  12061634 caaaatcgcaacttttggaaagatagagggtcaaaagtgcaattaagcc 12061586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 16 - 72
Target Start/End: Complemental strand, 49695406 - 49695350
Alignment:
Q  16 tagggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcc 72  Q
    ||||||| ||||||||||||||||| ||| |||| ||  ||||| ||||||||||||    
T  49695406 tagggggccaaaatcgcaacttcttaaaatatagaggaccaaaagtgcaattaagcc 49695350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 62; Significance: 1e-26; HSPs: 43)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 150 - 267
Target Start/End: Original strand, 11010248 - 11010365
Alignment:
Q  150 aggattctaaattaagaaattatttattgaaaaagtctaatatttcaatttccgatccattgaatgcataaatttcaataaaaacttactatctaaagtc 249  Q
    ||||||||||||||||||| |||| ||||||||||||||||| ||||||||| ||| |||||||| || || |||| |||||||| |||||||| |||||    
T  11010248 aggattctaaattaagaaactattcattgaaaaagtctaatacttcaatttctgatgcattgaatacacaactttccataaaaacatactatctgaagtc 11010347  T
Q  250 cgtaaagaatgaccttag 267  Q
    | |||| |||| ||||||    
T  11010348 cttaaaaaatgcccttag 11010365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 150 - 248
Target Start/End: Complemental strand, 40944369 - 40944271
Alignment:
Q  150 aggattctaaattaagaaattatttattgaaaaagtctaatatttcaatttccgatccattgaatgcataaatttcaataaaaacttactatctaaagt 248  Q
    |||||||||||||||||||||||| ||||||||||| ||||  |||||||| |||| ||||||||| | ||||||| ||||||| ||||||||||||||    
T  40944369 aggattctaaattaagaaattattcattgaaaaagtataatgcttcaattttcgatgcattgaatgtacaaatttccataaaaatttactatctaaagt 40944271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 16 - 73
Target Start/End: Complemental strand, 42586042 - 42585985
Alignment:
Q  16 tagggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcct 73  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||    
T  42586042 tagggggtcaaaatcgcaacttcttgaaacatagggggccaaaactgctattaagcct 42585985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 16 - 74
Target Start/End: Original strand, 22471954 - 22472012
Alignment:
Q  16 tagggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcctt 74  Q
    |||||||||||||||||||||||||| |||||||| |||||||| ||||||||||||||    
T  22471954 tagggggtcaaaatcgcaacttcttgtaacataggaggtcaaaagtgcaattaagcctt 22472012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 6464333 - 6464390
Alignment:
Q  16 tagggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcct 73  Q
    ||||||| |||||||||||||||||||||||||||||| ||||||||| |||||||||    
T  6464333 tagggggccaaaatcgcaacttcttgaaacatagggggccaaaactgctattaagcct 6464390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 16 - 73
Target Start/End: Complemental strand, 36361089 - 36361032
Alignment:
Q  16 tagggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcct 73  Q
    |||||| ||||||||||||||||||||||||||||||  |||||||||||||||||||    
T  36361089 taggggatcaaaatcgcaacttcttgaaacataggggaccaaaactgcaattaagcct 36361032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 24 - 74
Target Start/End: Complemental strand, 128302 - 128252
Alignment:
Q  24 caaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcctt 74  Q
    |||||| ||||||||||||||||||||||||||||||||| ||||||||||    
T  128302 caaaattgcaacttcttgaaacatagggggtcaaaactgctattaagcctt 128252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 16 - 73
Target Start/End: Complemental strand, 20126494 - 20126437
Alignment:
Q  16 tagggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcct 73  Q
    ||||||||||||||| |||||||||||||||||||||| ||||||| | |||||||||    
T  20126494 tagggggtcaaaatcacaacttcttgaaacatagggggccaaaactcctattaagcct 20126437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 154 - 287
Target Start/End: Original strand, 42877252 - 42877385
Alignment:
Q  154 ttctaaattaagaaattatttattgaaaaagtctaatatttcaatttccgatccattgaatgcataaatttcaataaaaacttactatctaaagtccgta 253  Q
    |||| |||| |||||||||| ||  ||||||| ||| |||||||||| | ||  ||||||| || || |||| ||||||| ||||||| |||||||  ||    
T  42877252 ttctcaattgagaaattattcatgaaaaaagtttaaaatttcaattttcaatgtattgaatacacaattttccataaaaatttactatttaaagtcttta 42877351  T
Q  254 aagaatgaccttagaaaactccttaacattttcc 287  Q
    |||| || |||||||| |||| ||||||||||||    
T  42877352 aagagtgcccttagaatactcgttaacattttcc 42877385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 147 - 266
Target Start/End: Complemental strand, 248567 - 248447
Alignment:
Q  147 ttaaggattctaaattaagaaattatttattgaaaaa-gtctaatatttcaatttccgatccattgaatgcataaatttcaataaaaacttactatctaa 245  Q
    |||||| |||| |||||||||||||||| || ||||| || ||| | |||||||||||||  |||||||||| || |||| ||||||| ||||||| | |    
T  248567 ttaaggtttctcaattaagaaattatttctttaaaaaagtttaacacttcaatttccgatgtattgaatgcacaattttccataaaaatttactatttca 248468  T
Q  246 agtccgtaaagaatgacctta 266  Q
    ||||| |||||| || |||||    
T  248467 agtccttaaagagtgccctta 248447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 16 - 73
Target Start/End: Complemental strand, 20364738 - 20364681
Alignment:
Q  16 tagggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcct 73  Q
    ||||||||||||||||||||||| ||| || ||||||| ||||||||| |||||||||    
T  20364738 tagggggtcaaaatcgcaacttcctgatacttagggggacaaaactgctattaagcct 20364681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 24 - 73
Target Start/End: Complemental strand, 38162641 - 38162592
Alignment:
Q  24 caaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcct 73  Q
    ||||||| |||||||||||||||||||||| ||||| |||||||||||||    
T  38162641 caaaatcacaacttcttgaaacatagggggccaaaagtgcaattaagcct 38162592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 19 - 75
Target Start/End: Complemental strand, 7611127 - 7611071
Alignment:
Q  19 ggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcctta 75  Q
    |||| ||||||||||||||||| |||||||||| || |||||||||||| |||||||    
T  7611127 ggggccaaaatcgcaacttcttaaaacatagggagttaaaactgcaattgagcctta 7611071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 179 - 255
Target Start/End: Original strand, 18988786 - 18988862
Alignment:
Q  179 aaaaagtctaatatttcaatttccgatccattgaatgcataaatttcaataaaaacttactatctaaagtccgtaaa 255  Q
    ||||||||||||| || ||||||| || |||||||||||||| |||  ||||||| ||||||||||| |||| ||||    
T  18988786 aaaaagtctaatacttaaatttccaatgcattgaatgcataagttttcataaaaatttactatctaatgtccttaaa 18988862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 16 - 74
Target Start/End: Original strand, 42586345 - 42586403
Alignment:
Q  16 tagggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcctt 74  Q
    ||||||| ||||||||||||||||  |||||| ||||| ||||||||| ||||||||||    
T  42586345 tagggggccaaaatcgcaacttctgtaaacatggggggccaaaactgctattaagcctt 42586403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 23 - 69
Target Start/End: Complemental strand, 43355767 - 43355721
Alignment:
Q  23 tcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaa 69  Q
    |||||||||||||||||||||| ||||| |||||||||||| |||||    
T  43355767 tcaaaatcgcaacttcttgaaatataggaggtcaaaactgctattaa 43355721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 16 - 53
Target Start/End: Original strand, 20126676 - 20126713
Alignment:
Q  16 tagggggtcaaaatcgcaacttcttgaaacataggggg 53  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  20126676 tagggggtcaaaatcgcaacttcttaaaacataggggg 20126713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 162 - 243
Target Start/End: Complemental strand, 22528821 - 22528740
Alignment:
Q  162 taagaaattatttattgaaaaagtctaatatttcaatttccgatccattgaatgcataaatttcaataaaaacttactatct 243  Q
    |||||||||||| ||||||||||| | ||  ||||||||||||| |||| ||| |||||||||  ||||||| |||| ||||    
T  22528821 taagaaattattcattgaaaaagtttgatgcttcaatttccgatacattaaatacataaattttcataaaaatttacaatct 22528740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 161 - 284
Target Start/End: Original strand, 16980752 - 16980876
Alignment:
Q  161 ttaagaaattatt-tattgaaaaagtctaatatttcaatttccgatccattgaatgcataaatttcaataaaaacttactatctaaagtccgtaaagaat 259  Q
    ||||||||||||| | |||| ||||| ||| | ||||||||||||| ||||||||| |||| |||  |||||||  |||||| |||||||  |||||| |    
T  16980752 ttaagaaattattcttttgagaaagtttaacacttcaatttccgatacattgaatgtataatttttcataaaaatgtactatttaaagtctttaaagagt 16980851  T
Q  260 gaccttagaaaactccttaacattt 284  Q
    | |||||| | |||| ||| |||||    
T  16980852 gtccttaggatactcgttagcattt 16980876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 26366085 - 26366137
Alignment:
Q  19 ggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagc 71  Q
    |||| ||||||| |||||||||||||||||||||| |||||  ||||||||||    
T  26366085 ggggccaaaatcacaacttcttgaaacatagggggccaaaagcgcaattaagc 26366137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 19 - 75
Target Start/End: Original strand, 36361422 - 36361478
Alignment:
Q  19 ggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcctta 75  Q
    |||| ||||||||||||||||| ||| |||||||| ||||||  |||||||||||||    
T  36361422 ggggccaaaatcgcaacttcttaaaatatagggggccaaaacgccaattaagcctta 36361478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 147 - 202
Target Start/End: Original strand, 26663636 - 26663691
Alignment:
Q  147 ttaaggattctaaattaagaaattatttattgaaaaagtctaatatttcaatttcc 202  Q
    ||||| |||||||| ||||||||||||| || |||||||| |||||||| ||||||    
T  26663636 ttaagcattctaaaataagaaattattttttaaaaaagtcaaatatttcgatttcc 26663691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 147 - 202
Target Start/End: Original strand, 26935231 - 26935286
Alignment:
Q  147 ttaaggattctaaattaagaaattatttattgaaaaagtctaatatttcaatttcc 202  Q
    ||||| |||||||| ||||||||||||| || |||||||| |||||||| ||||||    
T  26935231 ttaagcattctaaaataagaaattattttttaaaaaagtcaaatatttcgatttcc 26935286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 75
Target Start/End: Original strand, 38163673 - 38163732
Alignment:
Q  16 tagggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcctta 75  Q
    ||||||| ||||||||||||||||| ||| ||||| || ||||| ||||||||| |||||    
T  38163673 tagggggccaaaatcgcaacttcttaaaatataggaggccaaaagtgcaattaaacctta 38163732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 16 - 74
Target Start/End: Complemental strand, 3999142 - 3999084
Alignment:
Q  16 tagggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcctt 74  Q
    ||||||||||||||||||||||| |||||  |||||||  |||||||| ||||| ||||    
T  3999142 tagggggtcaaaatcgcaacttcgtgaaagttagggggcgaaaactgctattaaacctt 3999084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 69
Target Start/End: Original strand, 7611428 - 7611478
Alignment:
Q  19 ggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaa 69  Q
    |||| |||||| ||||||| || |||||||||||||||||||| |||||||    
T  7611428 ggggccaaaattgcaactttttaaaacatagggggtcaaaactacaattaa 7611478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 10332009 - 10331955
Alignment:
Q  19 ggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcct 73  Q
    |||| |||||||||||||| |  ||| |||||||||||||| |||||||||||||    
T  10332009 ggggccaaaatcgcaacttttgaaaagatagggggtcaaaagtgcaattaagcct 10331955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 69
Target Start/End: Original strand, 13428138 - 13428188
Alignment:
Q  19 ggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaa 69  Q
    ||||||||||| |||||||||| ||| |||||||| ||||||||| |||||    
T  13428138 ggggtcaaaattgcaacttcttaaaatatagggggccaaaactgctattaa 13428188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 16 - 74
Target Start/End: Complemental strand, 38973383 - 38973326
Alignment:
Q  16 tagggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcctt 74  Q
    ||||||| ||||||| ||| ||||| |||||||||||| ||||| ||||||||||||||    
T  38973383 tagggggccaaaatc-caatttcttaaaacatagggggccaaaagtgcaattaagcctt 38973326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 39049070 - 39049016
Alignment:
Q  19 ggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcct 73  Q
    ||||||||||||||||||| |  ||| |||| ||| |||||||||||||||||||    
T  39049070 ggggtcaaaatcgcaacttttgaaaagatagagggccaaaactgcaattaagcct 39049016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 15204288 - 15204344
Alignment:
Q  16 tagggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcct 73  Q
    |||||||||||||||||||||| | ||||  || |||||||||| |||||||||||||    
T  15204288 tagggggtcaaaatcgcaacttttagaaagtta-ggggtcaaaagtgcaattaagcct 15204344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 73
Target Start/End: Complemental strand, 24242073 - 24242016
Alignment:
Q  16 tagggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcct 73  Q
    |||||||||||||||||| |||  |||||  |||||||||||||||||| || |||||    
T  24242073 tagggggtcaaaatcgcacctttgtgaaagttagggggtcaaaactgcagtttagcct 24242016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 147 - 248
Target Start/End: Original strand, 35947644 - 35947745
Alignment:
Q  147 ttaaggattctaaattaagaaattatttattgaaaaagtctaatatttcaatttccgatccattgaatgcataaatttcaataaaaacttactatctaaa 246  Q
    |||||||| || ||| |||||| |||| |||| ||||   |||||||||||||| |||| ||| |||| || ||||||| |||||  |||||||| ||||    
T  35947644 ttaaggatactcaatcaagaaactattcattggaaaaacttaatatttcaattttcgatgcatagaattcacaaatttctataaacccttactatttaaa 35947743  T
Q  247 gt 248  Q
    ||    
T  35947744 gt 35947745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 24 - 73
Target Start/End: Complemental strand, 37887720 - 37887671
Alignment:
Q  24 caaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcct 73  Q
    |||||||||||||| |  ||| |||||||||||||| |||||||||||||    
T  37887720 caaaatcgcaacttttgaaaagatagggggtcaaaagtgcaattaagcct 37887671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 147 - 248
Target Start/End: Original strand, 42265437 - 42265538
Alignment:
Q  147 ttaaggattctaaattaagaaattatttattgaaaaagtctaatatttcaatttccgatccattgaatgcataaatttcaataaaaacttactatctaaa 246  Q
    ||||||||||| ||| || ||||||||  || |||||||| || |||||||||| | || |||||| | |||||| ||  | ||||||||||||| ||||    
T  42265437 ttaaggattcttaataaaaaaattattctttaaaaaagtcaaaaatttcaattttcaatgcattgatttcataaacttagacaaaaacttactatataaa 42265536  T
Q  247 gt 248  Q
    ||    
T  42265537 gt 42265538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 159 - 215
Target Start/End: Original strand, 4857273 - 4857329
Alignment:
Q  159 aattaagaaattatttattgaaaaagtctaatatttcaatttccgatccattgaatg 215  Q
    |||||||||||||||  |||||||||| ||| |||| ||||| |||| |||||||||    
T  4857273 aattaagaaattattctttgaaaaagtttaacattttaattttcgatacattgaatg 4857329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 16 - 72
Target Start/End: Complemental strand, 6815556 - 6815500
Alignment:
Q  16 tagggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcc 72  Q
    |||||||| ||||||||||||| |  ||| |||||||| ||||| ||||||||||||    
T  6815556 tagggggttaaaatcgcaacttttgaaaagatagggggccaaaagtgcaattaagcc 6815500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 188 - 236
Target Start/End: Complemental strand, 14328503 - 14328455
Alignment:
Q  188 aatatttcaatttccgatccattgaatgcataaatttcaataaaaactt 236  Q
    |||| |||||||| |||| ||||||||||||||||||  ||||||||||    
T  14328503 aataattcaattttcgattcattgaatgcataaatttttataaaaactt 14328455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 179 - 247
Target Start/End: Complemental strand, 15206568 - 15206500
Alignment:
Q  179 aaaaagtctaatatttcaatttccgatccattgaatgcataaatttcaataaaaacttactatctaaag 247  Q
    |||||||| |||| |||||||| |||| ||||||||||| ||||||  ||||||| ||| ||| |||||    
T  15206568 aaaaagtccaatacttcaattttcgattcattgaatgcacaaattttcataaaaaattattatttaaag 15206500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 15 - 67
Target Start/End: Complemental strand, 15885187 - 15885135
Alignment:
Q  15 atagggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaatt 67  Q
    |||||| |||||||||||||||| ||||||| || ||||| |||| |||||||    
T  15885187 atagggtgtcaaaatcgcaactttttgaaacttaaggggtgaaaagtgcaatt 15885135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 15 - 75
Target Start/End: Complemental strand, 16901054 - 16900994
Alignment:
Q  15 atagggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcctta 75  Q
    ||||||||||||||||||||| | |||||||||||| ||  |||| |||| || |||||||    
T  16901054 atagggggtcaaaatcgcaacattttgaaacataggaggcgaaaagtgcagtttagcctta 16900994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 17 - 73
Target Start/End: Original strand, 17441155 - 17441211
Alignment:
Q  17 agggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcct 73  Q
    |||||| |||||||||||||| |||||||| ||||| | |||| |||| ||||||||    
T  17441155 agggggccaaaatcgcaactttttgaaacacaggggatgaaaagtgcatttaagcct 17441211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 25 - 73
Target Start/End: Original strand, 31874118 - 31874166
Alignment:
Q  25 aaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcct 73  Q
    ||||||||||||| |||||||||||||| | |||| |||| ||||||||    
T  31874118 aaaatcgcaactttttgaaacataggggatgaaaaatgcatttaagcct 31874166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 60; Significance: 2e-25; HSPs: 61)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 154 - 289
Target Start/End: Complemental strand, 21813254 - 21813119
Alignment:
Q  154 ttctaaattaagaaattatttattgaaaaagtctaatatttcaatttccgatccattgaatgcataaatttcaataaaaacttactatctaaagtccgta 253  Q
    |||| ||||||||||||||| ||||||||||| ||| | || || ||||||| |||||||||||||| |||| ||||||| ||||||| |||| ||| ||    
T  21813254 ttctcaattaagaaattattcattgaaaaagtttaacactttaaattccgatgcattgaatgcataattttccataaaaatttactatttaaaatcctta 21813155  T
Q  254 aagaatgaccttagaaaactccttaacattttccaa 289  Q
    |||| || |||||| | |||| ||||||||||||||    
T  21813154 aagagtgcccttaggacactcattaacattttccaa 21813119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 147 - 249
Target Start/End: Original strand, 29212701 - 29212803
Alignment:
Q  147 ttaaggattctaaattaagaaattatttattgaaaaagtctaatatttcaatttccgatccattgaatgcataaatttcaataaaaacttactatctaaa 246  Q
    ||||||||| |||||||||||| |||| ||||||||||||||||  ||||||||  |||  |||||||||| || |||| ||||||| ||| ||||||||    
T  29212701 ttaaggattttaaattaagaaactattcattgaaaaagtctaatgcttcaatttatgatgtattgaatgcacaagtttctataaaaatttaatatctaaa 29212800  T
Q  247 gtc 249  Q
    |||    
T  29212801 gtc 29212803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 3193039 - 3193096
Alignment:
Q  16 tagggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcct 73  Q
    |||||||||||||||||||||||||||||  |||||||| |||||||| |||||||||    
T  3193039 tagggggtcaaaatcgcaacttcttgaaagttagggggtgaaaactgctattaagcct 3193096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 24 - 73
Target Start/End: Original strand, 17258196 - 17258245
Alignment:
Q  24 caaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcct 73  Q
    |||||||||||||||||||||||||||||| ||||| |||||||||||||    
T  17258196 caaaatcgcaacttcttgaaacatagggggccaaaagtgcaattaagcct 17258245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 33944867 - 33944924
Alignment:
Q  16 tagggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcct 73  Q
    |||||| ||||||||||||||||||||||||||| ||| ||||| |||||||||||||    
T  33944867 taggggttcaaaatcgcaacttcttgaaacatagagggccaaaagtgcaattaagcct 33944924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 147 - 243
Target Start/End: Original strand, 36494176 - 36494273
Alignment:
Q  147 ttaaggattctaaattaagaaattatttattgaaaaag-tctaatatttcaatttccgatccattgaatgcataaatttcaataaaaacttactatct 243  Q
    ||||||||||  |||||||||| |||| |||||||||  ||||||| |||||||||| ||  |||||||||| || |||| |||||||||||||||||    
T  36494176 ttaaggattcccaattaagaaactattcattgaaaaaaatctaatacttcaatttccaatgtattgaatgcacaagtttccataaaaacttactatct 36494273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 147 - 268
Target Start/End: Original strand, 40629093 - 40629214
Alignment:
Q  147 ttaaggattctaaattaagaaattatttattgaaaaagtctaatatttcaatttccgatccattgaatgcataaatttcaataaaaacttactatctaaa 246  Q
    ||||||||||| |||||| ||| |||||||||||||| |||||| ||  |||||| ||| |||| |||||| || |||  |||||| |||| ||||||||    
T  40629093 ttaaggattctcaattaaaaaaatatttattgaaaaaatctaatgttctaatttctgatacattaaatgcacaagtttttataaaatcttattatctaaa 40629192  T
Q  247 gtccgtaaagaatgaccttaga 268  Q
    ||   ||||||||| |||||||    
T  40629193 gtttttaaagaatgcccttaga 40629214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 16 - 73
Target Start/End: Complemental strand, 54476099 - 54476042
Alignment:
Q  16 tagggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcct 73  Q
    ||||||||||||||||||||||||| ||| |||||||| ||||| |||||||||||||    
T  54476099 tagggggtcaaaatcgcaacttcttaaaatatagggggccaaaagtgcaattaagcct 54476042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 24 - 72
Target Start/End: Complemental strand, 2181363 - 2181315
Alignment:
Q  24 caaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcc 72  Q
    |||||||||||||||||||||||||||||| ||||| ||||||||||||    
T  2181363 caaaatcgcaacttcttgaaacatagggggccaaaagtgcaattaagcc 2181315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 159 - 255
Target Start/End: Original strand, 49682180 - 49682276
Alignment:
Q  159 aattaagaaattatttattgaaaaagtctaatatttcaatttccgatccattgaatgcataaatttcaataaaaacttactatctaaagtccgtaaa 255  Q
    |||||| ||||||||  || ||||||| ||| ||||||||||||||  ||||||||||| || |||| ||||||| ||||||| |||||||| ||||    
T  49682180 aattaaaaaattattccttaaaaaagtttaacatttcaatttccgaagcattgaatgcacaattttctataaaaatttactatttaaagtccttaaa 49682276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 16 - 71
Target Start/End: Original strand, 37755195 - 37755250
Alignment:
Q  16 tagggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagc 71  Q
    |||||||  |||||||||||||| |||||||||||||| |||||||||||||||||    
T  37755195 tagggggctaaaatcgcaacttcatgaaacatagggggccaaaactgcaattaagc 37755250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 24 - 75
Target Start/End: Complemental strand, 40988646 - 40988595
Alignment:
Q  24 caaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcctta 75  Q
    |||||||||||||||||||||||||||| | ||||| |||||||||||||||    
T  40988646 caaaatcgcaacttcttgaaacatagggagccaaaagtgcaattaagcctta 40988595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 24 - 74
Target Start/End: Original strand, 5636673 - 5636723
Alignment:
Q  24 caaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcctt 74  Q
    ||||||||||||||||||||||||||| |||||||| ||||||||| ||||    
T  5636673 caaaatcgcaacttcttgaaacataggaggtcaaaagtgcaattaaacctt 5636723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 16 - 70
Target Start/End: Complemental strand, 51453597 - 51453544
Alignment:
Q  16 tagggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaag 70  Q
    ||||||||||||||||||||||||| ||||||| |||||||||||||| ||||||    
T  51453597 tagggggtcaaaatcgcaacttcttaaaacata-ggggtcaaaactgctattaag 51453544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 16 - 73
Target Start/End: Complemental strand, 50380211 - 50380154
Alignment:
Q  16 tagggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcct 73  Q
    ||||||| ||||||||||||||||| |||||||| ||| ||||| |||||||||||||    
T  50380211 tagggggccaaaatcgcaacttcttaaaacatagagggccaaaagtgcaattaagcct 50380154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 16 - 73
Target Start/End: Complemental strand, 51224982 - 51224925
Alignment:
Q  16 tagggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcct 73  Q
    ||||||| ||||||||||||||||||||||||||| || ||||| |||||| ||||||    
T  51224982 tagggggccaaaatcgcaacttcttgaaacataggaggccaaaagtgcaatcaagcct 51224925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 53255282 - 53255339
Alignment:
Q  16 tagggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcct 73  Q
    ||||||| ||||||||||||||||| ||||||||| || ||||||||| |||||||||    
T  53255282 tagggggccaaaatcgcaacttcttaaaacataggaggccaaaactgctattaagcct 53255339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 24 - 72
Target Start/End: Complemental strand, 53255011 - 53254963
Alignment:
Q  24 caaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcc 72  Q
    |||||||||||||||||||||||||||||| ||||||||  ||||||||    
T  53255011 caaaatcgcaacttcttgaaacatagggggccaaaactgttattaagcc 53254963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 24 - 75
Target Start/End: Complemental strand, 32770699 - 32770648
Alignment:
Q  24 caaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcctta 75  Q
    |||||||||||||||||||||||||||||  |||||  ||||||||||||||    
T  32770699 caaaatcgcaacttcttgaaacataggggaccaaaaacgcaattaagcctta 32770648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 27 - 70
Target Start/End: Complemental strand, 33445824 - 33445781
Alignment:
Q  27 aatcgcaacttcttgaaacatagggggtcaaaactgcaattaag 70  Q
    ||||||||||||||||||||||| ||||||||| ||||||||||    
T  33445824 aatcgcaacttcttgaaacatagagggtcaaaagtgcaattaag 33445781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 32 - 75
Target Start/End: Original strand, 40989672 - 40989715
Alignment:
Q  32 caacttcttgaaacatagggggtcaaaactgcaattaagcctta 75  Q
    |||||||||||||||||||||| ||||| |||||||||||||||    
T  40989672 caacttcttgaaacatagggggccaaaagtgcaattaagcctta 40989715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 20 - 75
Target Start/End: Original strand, 46336043 - 46336098
Alignment:
Q  20 gggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcctta 75  Q
    ||||||||||||||| ||||| ||| ||||||| |||||||||| |||||||||||    
T  46336043 gggtcaaaatcgcaatttcttaaaatataggggatcaaaactgctattaagcctta 46336098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 16 - 70
Target Start/End: Complemental strand, 17256624 - 17256570
Alignment:
Q  16 tagggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaag 70  Q
    ||||||| |||||| |||||||||||||| |||||||| ||||| ||||||||||    
T  17256624 tagggggccaaaattgcaacttcttgaaatatagggggccaaaagtgcaattaag 17256570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 159 - 249
Target Start/End: Complemental strand, 32606475 - 32606385
Alignment:
Q  159 aattaagaaattatttattgaaaaagtctaatatttcaatttccgatccattgaatgcataaatttcaataaaaacttactatctaaagtc 249  Q
    |||||| ||||||| | ||||||||   ||| ||||||||||||||| |||||||||||||| |||  ||||||| ||| ||| |||||||    
T  32606475 aattaaaaaattatattttgaaaaaagttaacatttcaatttccgatgcattgaatgcataatttttcataaaaatttattatttaaagtc 32606385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 24 - 74
Target Start/End: Original strand, 50764197 - 50764246
Alignment:
Q  24 caaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcctt 74  Q
    ||||||||||||||||| ||||||| |||||||||| ||||||||||||||    
T  50764197 caaaatcgcaacttcttaaaacata-ggggtcaaaagtgcaattaagcctt 50764246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 147 - 248
Target Start/End: Complemental strand, 7278270 - 7278169
Alignment:
Q  147 ttaaggattctaaattaagaaattatttattgaaaaagtctaatatttcaatttccgatccattgaatgcataaatttcaataaaaacttactatctaaa 246  Q
    |||||||| || ||||| |||| |||| |||  |||||  ||||||||| |||||| || |||| |||||| || |||| ||||||||||||||| ||||    
T  7278270 ttaaggatactcaattacgaaactattcattagaaaagcttaatatttcgatttccaatgcattcaatgcacaagtttcgataaaaacttactatttaaa 7278171  T
Q  247 gt 248  Q
    ||    
T  7278170 gt 7278169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 25 - 74
Target Start/End: Original strand, 10732414 - 10732463
Alignment:
Q  25 aaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcctt 74  Q
    |||||||||||||||||||||||| |||| ||||| ||||||||| ||||    
T  10732414 aaaatcgcaacttcttgaaacataaggggccaaaagtgcaattaaacctt 10732463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 159 - 232
Target Start/End: Original strand, 39144981 - 39145054
Alignment:
Q  159 aattaagaaattatttattgaaaaagtctaatatttcaatttccgatccattgaatgcataaatttcaataaaa 232  Q
    |||||||||||| ||| || ||||| | ||| | ||||||||||||| |||||||||||||| |||| ||||||    
T  39144981 aattaagaaattgttttttaaaaaattttaacacttcaatttccgatgcattgaatgcataattttctataaaa 39145054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 42686538 - 42686485
Alignment:
Q  16 tagggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaa 69  Q
    |||||||||||||||||||||| ||||||| |||| ||| |||||||| |||||    
T  42686538 tagggggtcaaaatcgcaactttttgaaacttaggaggttaaaactgctattaa 42686485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 17 - 74
Target Start/End: Original strand, 44457445 - 44457502
Alignment:
Q  17 agggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcctt 74  Q
    |||||| |||||||||||||| |||||||||||| ||| |||| |||| |||||||||    
T  44457445 agggggccaaaatcgcaactttttgaaacataggaggtgaaaaatgcatttaagcctt 44457502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 16 - 73
Target Start/End: Complemental strand, 48907349 - 48907292
Alignment:
Q  16 tagggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcct 73  Q
    ||||||||||||||| |||| | ||||||||||||||||||||| |||| || |||||    
T  48907349 tagggggtcaaaatcacaacattttgaaacatagggggtcaaaagtgcactttagcct 48907292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 24 - 73
Target Start/End: Original strand, 50381572 - 50381621
Alignment:
Q  24 caaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcct 73  Q
    |||||||||||||||||||||||||||| | ||||| ||||||| |||||    
T  50381572 caaaatcgcaacttcttgaaacatagggagccaaaagtgcaattgagcct 50381621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 24 - 72
Target Start/End: Original strand, 33447237 - 33447285
Alignment:
Q  24 caaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcc 72  Q
    ||||||||||||||||| |||||||||||  ||||| ||||||||||||    
T  33447237 caaaatcgcaacttcttaaaacataggggaccaaaagtgcaattaagcc 33447285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 24 - 72
Target Start/End: Original strand, 35495213 - 35495261
Alignment:
Q  24 caaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcc 72  Q
    ||||||||||||||||||||| ||| |||| ||||| ||||||||||||    
T  35495213 caaaatcgcaacttcttgaaatataaggggccaaaagtgcaattaagcc 35495261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 17 - 73
Target Start/End: Original strand, 43040443 - 43040499
Alignment:
Q  17 agggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcct 73  Q
    ||||||||||||||||||||| ||||||||||||  || |||| |||| ||||||||    
T  43040443 agggggtcaaaatcgcaactttttgaaacataggaagtgaaaagtgcatttaagcct 43040499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 166 - 237
Target Start/End: Original strand, 3383356 - 3383427
Alignment:
Q  166 aaattatttattgaaaaagtctaatatttcaatttccgatccattgaatgcataaatttcaataaaaactta 237  Q
    ||||| || ||| |||||||| |||| ||||||||| ||| ||||||||  |||||||||||||||| ||||    
T  3383356 aaattgttcattaaaaaagtcaaatacttcaatttctgatacattgaatatataaatttcaataaaatctta 3383427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 24 - 71
Target Start/End: Complemental strand, 32831208 - 32831161
Alignment:
Q  24 caaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagc 71  Q
    |||||| | ||||||||||||||||||||| ||||||||| |||||||    
T  32831208 caaaattgtaacttcttgaaacatagggggccaaaactgctattaagc 32831161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 71
Target Start/End: Complemental strand, 33943590 - 33943535
Alignment:
Q  16 tagggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagc 71  Q
    |||||| ||||||||| |||||||| ||||||| |||| ||||| |||||||||||    
T  33943590 taggggatcaaaatcgaaacttcttaaaacataaggggccaaaagtgcaattaagc 33943535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 24 - 71
Target Start/End: Complemental strand, 36315837 - 36315790
Alignment:
Q  24 caaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagc 71  Q
    |||||||||||||||||||||||||| ||| ||||  |||||||||||    
T  36315837 caaaatcgcaacttcttgaaacatagtgggccaaaggtgcaattaagc 36315790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 166 - 241
Target Start/End: Complemental strand, 46896002 - 46895927
Alignment:
Q  166 aaattatttattgaaaaagtctaatatttcaatttccgatccattgaatgcataaatttcaataaaaacttactat 241  Q
    ||||||||||  ||||||||  || | ||||||||  ||| ||||||||||||||||||  |||||||||||||||    
T  46896002 aaattatttaaagaaaaagttaaagacttcaatttttgatgcattgaatgcataaatttttataaaaacttactat 46895927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 147 - 202
Target Start/End: Original strand, 53040470 - 53040525
Alignment:
Q  147 ttaaggattctaaattaagaaattatttattgaaaaagtctaatatttcaatttcc 202  Q
    |||||||||||||||||||||||||||  || ||||| || |||| ||||||||||    
T  53040470 ttaaggattctaaattaagaaattattatttaaaaaattcaaatacttcaatttcc 53040525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 24 - 74
Target Start/End: Original strand, 1807438 - 1807488
Alignment:
Q  24 caaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcctt 74  Q
    ||||||||||| ||||| ||| |||||||| ||||||||| ||||||||||    
T  1807438 caaaatcgcaaattcttaaaatatagggggccaaaactgctattaagcctt 1807488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 69
Target Start/End: Original strand, 6128512 - 6128562
Alignment:
Q  19 ggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaa 69  Q
    |||||||||||||||||||||| ||| |||| ||| ||||||||| |||||    
T  6128512 ggggtcaaaatcgcaacttcttaaaatatagtgggccaaaactgctattaa 6128562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 15 - 53
Target Start/End: Complemental strand, 8338997 - 8338959
Alignment:
Q  15 atagggggtcaaaatcgcaacttcttgaaacataggggg 53  Q
    ||||||||||||||||||||| | |||||||||||||||    
T  8338997 atagggggtcaaaatcgcaacattttgaaacataggggg 8338959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 159 - 217
Target Start/End: Original strand, 31294383 - 31294441
Alignment:
Q  159 aattaagaaattatttattgaaaaagtctaatatttcaatttccgatccattgaatgca 217  Q
    |||||||||||||||  |||||||||| ||| | || |||||||||| |||||||||||    
T  31294383 aattaagaaattattctttgaaaaagtttaacactttaatttccgatgcattgaatgca 31294441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 24 - 74
Target Start/End: Original strand, 54477335 - 54477385
Alignment:
Q  24 caaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcctt 74  Q
    ||||||| ||||||||| |||||||||||| ||||| ||||||||| ||||    
T  54477335 caaaatcacaacttcttaaaacatagggggccaaaagtgcaattaatcctt 54477385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 147 - 200
Target Start/End: Original strand, 2831548 - 2831601
Alignment:
Q  147 ttaaggattctaaattaagaaattatttattgaaaaagtctaatatttcaattt 200  Q
    |||||||||| |||| |||||||||||| || | |||||| |||||||||||||    
T  2831548 ttaaggattccaaatcaagaaattattttttaataaagtcaaatatttcaattt 2831601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 24 - 73
Target Start/End: Original strand, 3354951 - 3355000
Alignment:
Q  24 caaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcct 73  Q
    ||||||||||||||||||| || ||||||| |||| |||| |||||||||    
T  3354951 caaaatcgcaacttcttgatacttagggggccaaatctgctattaagcct 3355000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 158 - 227
Target Start/End: Original strand, 25095464 - 25095533
Alignment:
Q  158 aaattaagaaattatttattgaaaaagtctaatatttcaatttccgatccattgaatgcataaatttcaa 227  Q
    ||||||| |||||||||||||||||| ||   || ||||||||  ||| |||||||| ||||||||||||    
T  25095464 aaattaaaaaattatttattgaaaaaatcagttacttcaatttatgattcattgaatacataaatttcaa 25095533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 73
Target Start/End: Complemental strand, 28204536 - 28204479
Alignment:
Q  16 tagggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcct 73  Q
    ||||||||||||||||||||||| |||||  || ||||  |||||||| |||||||||    
T  28204536 tagggggtcaaaatcgcaacttcgtgaaagttaaggggcgaaaactgctattaagcct 28204479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 46934245 - 46934302
Alignment:
Q  16 tagggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcct 73  Q
    ||||||| || ||||||||||| | |||| |||||||| ||||| |||||||||||||    
T  46934245 tagggggccataatcgcaacttttggaaagatagggggccaaaagtgcaattaagcct 46934302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 73
Target Start/End: Complemental strand, 49001706 - 49001649
Alignment:
Q  16 tagggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcct 73  Q
    |||| |||||||||||||| ||||| |||||||| ||| ||||| | |||||||||||    
T  49001706 taggaggtcaaaatcgcaatttcttaaaacatagagggccaaaagtacaattaagcct 49001649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 24 - 73
Target Start/End: Original strand, 49002767 - 49002816
Alignment:
Q  24 caaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcct 73  Q
    |||||||||||||||||||||  ||| ||| ||||| |||||||||||||    
T  49002767 caaaatcgcaacttcttgaaaattagagggccaaaagtgcaattaagcct 49002816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 24 - 69
Target Start/End: Original strand, 51226516 - 51226561
Alignment:
Q  24 caaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaa 69  Q
    ||||||||||||||||| |||||||||||  ||||| |||||||||    
T  51226516 caaaatcgcaacttcttaaaacataggggaccaaaagtgcaattaa 51226561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 25 - 74
Target Start/End: Complemental strand, 53764622 - 53764573
Alignment:
Q  25 aaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcctt 74  Q
    ||||||||||||| | |||| |||||||| ||||| ||||||||||||||    
T  53764622 aaaatcgcaacttttggaaagatagggggccaaaagtgcaattaagcctt 53764573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 73
Target Start/End: Complemental strand, 54716532 - 54716475
Alignment:
Q  16 tagggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcct 73  Q
    ||||||||||||||| |||||| |  ||| |||||||| ||||| |||||||||||||    
T  54716532 tagggggtcaaaatcacaacttttgaaaagatagggggccaaaagtgcaattaagcct 54716475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 159 - 255
Target Start/End: Original strand, 3973826 - 3973922
Alignment:
Q  159 aattaagaaattatttattgaaaaagtctaatatttcaatttccgatccattgaatgcataaatttcaataaaaacttactatctaaagtccgtaaa 255  Q
    |||||||||||||||  || |||||||  ||   ||||||||||||| |||| |||||| || |||| ||||||| ||||||| | |||||| ||||    
T  3973826 aattaagaaattattccttaaaaaagttcaacgcttcaatttccgatgcattaaatgcacaattttccataaaaatttactatttcaagtccttaaa 3973922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 16 - 72
Target Start/End: Complemental strand, 5635404 - 5635348
Alignment:
Q  16 tagggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcc 72  Q
    ||||||| ||||||  |||| ||||||||||||||||| | ||| ||||||||||||    
T  5635404 tagggggccaaaatgacaacatcttgaaacatagggggccgaaagtgcaattaagcc 5635348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 17 - 73
Target Start/End: Original strand, 19975547 - 19975603
Alignment:
Q  17 agggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcct 73  Q
    |||||||||||||| ||||||  | |||| ||||||||||||| || ||||||||||    
T  19975547 agggggtcaaaatcacaactttataaaacttagggggtcaaaagtgtaattaagcct 19975603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 24 - 72
Target Start/End: Original strand, 32772046 - 32772094
Alignment:
Q  24 caaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcc 72  Q
    ||||||| |||||||||||||||||||||| ||||| |  |||||||||    
T  32772046 caaaatcacaacttcttgaaacatagggggccaaaagtataattaagcc 32772094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 16 - 71
Target Start/End: Original strand, 49075562 - 49075618
Alignment:
Q  16 tagggggtcaaaatcgcaactt-cttgaaacatagggggtcaaaactgcaattaagc 71  Q
    ||||||| ||||||| |||||| ||| |||||||| ||||||||| |||||||||||    
T  49075562 tagggggccaaaatcacaactttcttaaaacatagagggtcaaaagtgcaattaagc 49075618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 56; Significance: 5e-23; HSPs: 70)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 147 - 246
Target Start/End: Original strand, 12787849 - 12787948
Alignment:
Q  147 ttaaggattctaaattaagaaattatttattgaaaaagtctaatatttcaatttccgatccattgaatgcataaatttcaataaaaacttactatctaaa 246  Q
    ||||| |||||||||||| |||||||||||||||||||| ||||  |||||||||| || |||| |||||| ||||||  ||||||||||||||||||||    
T  12787849 ttaagaattctaaattaaaaaattatttattgaaaaagtataatgcttcaatttccaattcattaaatgcacaaattttcataaaaacttactatctaaa 12787948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 147 - 249
Target Start/End: Original strand, 10565346 - 10565448
Alignment:
Q  147 ttaaggattctaaattaagaaattatttattgaaaaagtctaatatttcaatttccgatccattgaatgcataaatttcaataaaaacttactatctaaa 246  Q
    ||||| |||||||||||||||| |||| ||||||||||||||||| || |||||  |||  |||||||||| ||||||| ||||||| ||||||||||||    
T  10565346 ttaagaattctaaattaagaaactattcattgaaaaagtctaatactttaatttttgatgtattgaatgcacaaatttccataaaaatttactatctaaa 10565445  T
Q  247 gtc 249  Q
    |||    
T  10565446 gtc 10565448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 147 - 246
Target Start/End: Original strand, 44042538 - 44042637
Alignment:
Q  147 ttaaggattctaaattaagaaattatttattgaaaaagtctaatatttcaatttccgatccattgaatgcataaatttcaataaaaacttactatctaaa 246  Q
    ||||||||||  |||||||||| |||| |||||||||||  |||| |||||||||| || ||||||||||| ||||||| ||||||||||||||| ||||    
T  44042538 ttaaggattcataattaagaaactattcattgaaaaagttcaatacttcaatttccaatgcattgaatgcacaaatttctataaaaacttactatttaaa 44042637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 147 - 249
Target Start/End: Original strand, 4166496 - 4166598
Alignment:
Q  147 ttaaggattctaaattaagaaattatttattgaaaaagtctaatatttcaatttccgatccattgaatgcataaatttcaataaaaacttactatctaaa 246  Q
    ||||||||||  ||| ||||||||||| |||||||||||  ||||||||||||||| || ||||||||||| || |||| ||||||||||  ||||||||    
T  4166496 ttaaggattcataatcaagaaattattcattgaaaaagttcaatatttcaatttccaatacattgaatgcacaagtttccataaaaactttatatctaaa 4166595  T
Q  247 gtc 249  Q
    |||    
T  4166596 gtc 4166598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 16 - 74
Target Start/End: Complemental strand, 14170478 - 14170420
Alignment:
Q  16 tagggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcctt 74  Q
    ||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  14170478 tagggggccaaaatcgcaacttcttaaaacatagggggtcaaaactgcaattaagcctt 14170420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 19 - 74
Target Start/End: Complemental strand, 23475677 - 23475622
Alignment:
Q  19 ggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcctt 74  Q
    |||||||||||| |||||||||||||||||||||| ||||||||||||||||||||    
T  23475677 ggggtcaaaatcacaacttcttgaaacatagggggccaaaactgcaattaagcctt 23475622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 16 - 75
Target Start/End: Original strand, 35795589 - 35795648
Alignment:
Q  16 tagggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcctta 75  Q
    ||||||| ||||||| |||||||||||||||||||||| |||||||||||||||||||||    
T  35795589 tagggggccaaaatcacaacttcttgaaacatagggggccaaaactgcaattaagcctta 35795648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 23 - 75
Target Start/End: Complemental strand, 27225830 - 27225778
Alignment:
Q  23 tcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcctta 75  Q
    |||||||||||||||||| |||||||||||||||||||||||||||| |||||    
T  27225830 tcaaaatcgcaacttcttaaaacatagggggtcaaaactgcaattaaacctta 27225778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 16 - 72
Target Start/End: Complemental strand, 45308510 - 45308454
Alignment:
Q  16 tagggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcc 72  Q
    |||||| ||||||||||||||||||||||||||||||| ||||| ||||||||||||    
T  45308510 taggggttcaaaatcgcaacttcttgaaacatagggggccaaaagtgcaattaagcc 45308454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 16 - 74
Target Start/End: Complemental strand, 755959 - 755901
Alignment:
Q  16 tagggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcctt 74  Q
    ||||||| |||||||||||||||||||||||||| ||| ||||||||| ||||||||||    
T  755959 tagggggccaaaatcgcaacttcttgaaacatagagggccaaaactgctattaagcctt 755901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 16 - 70
Target Start/End: Complemental strand, 35795273 - 35795219
Alignment:
Q  16 tagggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaag 70  Q
    |||||||||||||| ||||||| ||||||||||||||| ||||||||||||||||    
T  35795273 tagggggtcaaaattgcaactttttgaaacatagggggccaaaactgcaattaag 35795219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 159 - 248
Target Start/End: Complemental strand, 4508006 - 4507917
Alignment:
Q  159 aattaagaaattatttattgaaaaagtctaatatttcaatttccgatccattgaatgcataaatttcaataaaaacttactatctaaagt 248  Q
    |||||||||| ||||||||||||||   | ||||||||||||| ||| |||| ||||| ||| |||| |||||||||||| |||||||||    
T  4508006 aattaagaaactatttattgaaaaaacatcatatttcaatttctgatgcattaaatgcgtaagtttccataaaaacttaccatctaaagt 4507917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 16 - 73
Target Start/End: Complemental strand, 17512153 - 17512096
Alignment:
Q  16 tagggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcct 73  Q
    ||||||| ||||||||||||||||||||| |||||||| |||||||||||||| ||||    
T  17512153 tagggggccaaaatcgcaacttcttgaaatatagggggccaaaactgcaattatgcct 17512096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 23936335 - 23936282
Alignment:
Q  16 tagggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaa 69  Q
    ||||||| |||||||||||||||||||||||||||||| ||||| |||||||||    
T  23936335 tagggggccaaaatcgcaacttcttgaaacatagggggccaaaagtgcaattaa 23936282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 147 - 248
Target Start/End: Original strand, 24457828 - 24457929
Alignment:
Q  147 ttaaggattctaaattaagaaattatttattgaaaaagtctaatatttcaatttccgatccattgaatgcataaatttcaataaaaacttactatctaaa 246  Q
    ||||||| |||||||||| ||| |||| |||||||||||||||| ||||||||||  || |||| || ||| || |||  ||||||||||||||| ||||    
T  24457828 ttaaggaatctaaattaaaaaactattcattgaaaaagtctaatgtttcaatttcaaatgcattaaaagcacaagttttcataaaaacttactatttaaa 24457927  T
Q  247 gt 248  Q
    ||    
T  24457928 gt 24457929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 170 - 249
Target Start/End: Original strand, 6904192 - 6904271
Alignment:
Q  170 tatttattgaaaaagtctaatatttcaatttccgatccattgaatgcataaatttcaataaaaacttactatctaaagtc 249  Q
    |||| ||||||||||| ||||  ||||||||||||| ||||||| ||| || |||| ||||||| |||||||||||||||    
T  6904192 tattcattgaaaaagtttaatgcttcaatttccgatgcattgaacgcacaagtttccataaaaaattactatctaaagtc 6904271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 14 - 73
Target Start/End: Complemental strand, 26889351 - 26889292
Alignment:
Q  14 catagggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcct 73  Q
    ||||| |||||||||| ||||||||| ||||||||||||| ||||||||| |||||||||    
T  26889351 catagagggtcaaaattgcaacttctggaaacatagggggccaaaactgctattaagcct 26889292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 27 - 72
Target Start/End: Original strand, 17512456 - 17512501
Alignment:
Q  27 aatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcc 72  Q
    |||||||||||||||||| ||||||| |||||||||||||||||||    
T  17512456 aatcgcaacttcttgaaatataggggatcaaaactgcaattaagcc 17512501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 159 - 288
Target Start/End: Complemental strand, 20142532 - 20142403
Alignment:
Q  159 aattaagaaattatttattgaaaaagtctaatatttcaatttccgatccattgaatgcataaatttcaataaaaacttactatctaaagtccgtaaagaa 258  Q
    |||||||||||||||| || ||||||| ||| | || ||||| |||| |||| |||||| || || | ||||||| ||| ||| |||||||| |||| ||    
T  20142532 aattaagaaattatttttttaaaaagtttaacactttaattttcgatgcattaaatgcacaatttcccataaaaatttattatttaaagtccttaaataa 20142433  T
Q  259 tgaccttagaaaactccttaacattttcca 288  Q
    ||  || |||| |||| |||||||||||||    
T  20142432 tgctctaagaatactcgttaacattttcca 20142403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 45522449 - 45522506
Alignment:
Q  16 tagggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcct 73  Q
    |||||||  |||||||||||||||| ||||||||||||||||||||||  ||||||||    
T  45522449 tagggggctaaaatcgcaacttcttaaaacatagggggtcaaaactgcttttaagcct 45522506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 20 - 72
Target Start/End: Complemental strand, 6041141 - 6041089
Alignment:
Q  20 gggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcc 72  Q
    |||||||||||| ||||||||||||||||||||| ||||||||  ||||||||    
T  6041141 gggtcaaaatcgtaacttcttgaaacatagggggccaaaactgttattaagcc 6041089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 20 - 72
Target Start/End: Complemental strand, 6044773 - 6044721
Alignment:
Q  20 gggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcc 72  Q
    |||||||||||| ||||||||||||||||||||| ||||||||  ||||||||    
T  6044773 gggtcaaaatcgtaacttcttgaaacatagggggccaaaactgttattaagcc 6044721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 180 - 260
Target Start/End: Original strand, 14237162 - 14237242
Alignment:
Q  180 aaaagtctaatatttcaatttccgatccattgaatgcataaatttcaataaaaacttactatctaaagtccgtaaagaatg 260  Q
    |||||| ||| | ||||||||||||| |||| |||||| || |||| ||||||| ||||||| |||||||| |||||||||    
T  14237162 aaaagtttaacacttcaatttccgatgcattaaatgcacaattttccataaaaatttactatttaaagtccttaaagaatg 14237242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 27 - 74
Target Start/End: Original strand, 11289315 - 11289362
Alignment:
Q  27 aatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcctt 74  Q
    ||||||||||||||||||||||||||| |||| |||| ||||||||||    
T  11289315 aatcgcaacttcttgaaacatagggggccaaagctgctattaagcctt 11289362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 24 - 75
Target Start/End: Complemental strand, 12278883 - 12278832
Alignment:
Q  24 caaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcctta 75  Q
    ||||||||||||||||| |||||||||||| ||||| | |||||||||||||    
T  12278883 caaaatcgcaacttcttaaaacatagggggccaaaagtacaattaagcctta 12278832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 17 - 72
Target Start/End: Complemental strand, 34602069 - 34602014
Alignment:
Q  17 agggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcc 72  Q
    |||||| |||||||||||||| |||||||||||||||| |||| |||| |||||||    
T  34602069 agggggccaaaatcgcaactttttgaaacatagggggtgaaaagtgcatttaagcc 34602014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 163 - 214
Target Start/End: Complemental strand, 39312245 - 39312194
Alignment:
Q  163 aagaaattatttattgaaaaagtctaatatttcaatttccgatccattgaat 214  Q
    ||||||||||| ||||||||||| ||||| ||||||||||||| ||||||||    
T  39312245 aagaaattattcattgaaaaagtttaatacttcaatttccgatgcattgaat 39312194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 16 - 59
Target Start/End: Original strand, 45163718 - 45163761
Alignment:
Q  16 tagggggtcaaaatcgcaacttcttgaaacatagggggtcaaaa 59  Q
    ||||||| |||||||||||||||||||||||||||||| |||||    
T  45163718 tagggggccaaaatcgcaacttcttgaaacatagggggccaaaa 45163761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 25 - 71
Target Start/End: Complemental strand, 5916394 - 5916348
Alignment:
Q  25 aaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagc 71  Q
    ||||||||||||| |||||||||||| |||||||| |||||||||||    
T  5916394 aaaatcgcaactttttgaaacataggaggtcaaaagtgcaattaagc 5916348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 16 - 70
Target Start/End: Original strand, 12280359 - 12280413
Alignment:
Q  16 tagggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaag 70  Q
    ||||||| ||||||||||||||||| ||||||||  |||||||| ||||||||||    
T  12280359 tagggggccaaaatcgcaacttcttaaaacatagaaggtcaaaagtgcaattaag 12280413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 24 - 74
Target Start/End: Complemental strand, 18650979 - 18650929
Alignment:
Q  24 caaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcctt 74  Q
    |||||||||||||||||||||||||||||| ||||| || |||||| ||||    
T  18650979 caaaatcgcaacttcttgaaacatagggggccaaaagtgtaattaaacctt 18650929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 16 - 74
Target Start/End: Original strand, 44807332 - 44807390
Alignment:
Q  16 tagggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcctt 74  Q
    ||||||| |||||||||||||| |  ||| |||||||||||||| ||||||||||||||    
T  44807332 tagggggccaaaatcgcaacttttgaaaagatagggggtcaaaagtgcaattaagcctt 44807390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 24 - 73
Target Start/End: Original strand, 756123 - 756172
Alignment:
Q  24 caaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcct 73  Q
    ||||||||||||||||| |||||||||| | ||||||||| |||||||||    
T  756123 caaaatcgcaacttcttaaaacatagggagccaaaactgctattaagcct 756172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 24 - 69
Target Start/End: Complemental strand, 2802696 - 2802651
Alignment:
Q  24 caaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaa 69  Q
    ||||||||||||||||| | |||||||||||||||||||| |||||    
T  2802696 caaaatcgcaacttcttaatacatagggggtcaaaactgctattaa 2802651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 2803006 - 2803063
Alignment:
Q  16 tagggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcct 73  Q
    ||||||| |||||| |||||||||  ||||||||||| |||||||||| |||||||||    
T  2803006 tagggggccaaaattgcaacttctgtaaacataggggatcaaaactgctattaagcct 2803063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 16 - 73
Target Start/End: Complemental strand, 5180751 - 5180694
Alignment:
Q  16 tagggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcct 73  Q
    |||| |||||||||||||| ||| ||| |  |||||||||||||||||||||||||||    
T  5180751 taggaggtcaaaatcgcaagttcatgatagttagggggtcaaaactgcaattaagcct 5180694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 7010979 - 7010926
Alignment:
Q  16 tagggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaa 69  Q
    |||||||||| ||||||||||||||||||| ||| |||| |||||||| |||||    
T  7010979 tagggggtcagaatcgcaacttcttgaaacttagagggttaaaactgctattaa 7010926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 17 - 74
Target Start/End: Complemental strand, 27453181 - 27453124
Alignment:
Q  17 agggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcctt 74  Q
    |||||| |||| ||||||||| |||||||||||||||| |||| |||| |||||||||    
T  27453181 agggggccaaattcgcaactttttgaaacatagggggtgaaaaatgcatttaagcctt 27453124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 147 - 248
Target Start/End: Complemental strand, 34336578 - 34336477
Alignment:
Q  147 ttaaggattctaaattaagaaattatttattgaaaaagtctaatatttcaatttccgatccattgaatgcataaatttcaataaaaacttactatctaaa 246  Q
    ||||||||||| ||| |||||||||||  || |||||||| || | |||||||||| || |||||| | |||||| ||  | ||||||||||||| ||||    
T  34336578 ttaaggattcttaataaagaaattattctttaaaaaagtcaaaaacttcaatttccaatgcattgatttcataaactttgacaaaaacttactatttaaa 34336479  T
Q  247 gt 248  Q
    ||    
T  34336478 gt 34336477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 24 - 72
Target Start/End: Complemental strand, 20788082 - 20788034
Alignment:
Q  24 caaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcc 72  Q
    |||||| ||||||| ||||||||||||||| ||||| ||||||||||||    
T  20788082 caaaattgcaacttattgaaacatagggggccaaaagtgcaattaagcc 20788034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 17 - 73
Target Start/End: Original strand, 27453534 - 27453590
Alignment:
Q  17 agggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcct 73  Q
    |||||| ||||||| |||||| |||||||||||||||| |||| |||| ||||||||    
T  27453534 agggggccaaaatcacaactttttgaaacatagggggtgaaaagtgcatttaagcct 27453590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 159 - 255
Target Start/End: Complemental strand, 33286018 - 33285922
Alignment:
Q  159 aattaagaaattatttattgaaaaagtctaatatttcaatttccgatccattgaatgcataaatttcaataaaaacttactatctaaagtccgtaaa 255  Q
    |||||||||||||||| |||||||| | ||| |||||||||| ||||  ||| ||| || || |||  ||||||| ||||||| |||||||| ||||    
T  33286018 aattaagaaattattttttgaaaaaatttaacatttcaattttcgatgtattaaatacacaatttttcataaaaatttactatttaaagtccttaaa 33285922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 159 - 287
Target Start/End: Complemental strand, 43238234 - 43238106
Alignment:
Q  159 aattaagaaattatttattgaaaaagtctaatatttcaatttccgatccattgaatgcataaatttcaataaaaacttactatctaaagtccgtaaagaa 258  Q
    |||||||||||||||  || ||||||| ||| | |||||||| |||| |||| |||| | || |||| ||||||| ||||||| |||||| | ||||||     
T  43238234 aattaagaaattattccttaaaaaagtttaacacttcaattttcgatgcattaaatgtagaattttccataaaaatttactatttaaagttcttaaagag 43238135  T
Q  259 tgaccttagaaaactccttaacattttcc 287  Q
    ||  |||||   |||| ||||||||||||    
T  43238134 tgcacttagggcactcgttaacattttcc 43238106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 25 - 72
Target Start/End: Original strand, 8952829 - 8952876
Alignment:
Q  25 aaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcc 72  Q
    ||||||||| ||||||||||||||||| | ||||| ||||||||||||    
T  8952829 aaaatcgcatcttcttgaaacatagggagccaaaagtgcaattaagcc 8952876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 150 - 257
Target Start/End: Complemental strand, 41106100 - 41105993
Alignment:
Q  150 aggattctaaattaagaaattatttattgaaaaagtctaatatttcaatttccgatccattgaatgcataaatttcaataaaaacttactatctaaagtc 249  Q
    ||||||| |||||||||||||| | ||| |||||||| |||| |||||||| | || |||||||| || || |||   ||||||||||| || ||| |||    
T  41106100 aggattccaaattaagaaattaatcattaaaaaagtcaaatagttcaattttcaatgcattgaattcacaatttttcgtaaaaacttaccatttaaggtc 41106001  T
Q  250 cgtaaaga 257  Q
    | ||||||    
T  41106000 cttaaaga 41105993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 208 - 259
Target Start/End: Original strand, 41646611 - 41646662
Alignment:
Q  208 attgaatgcataaatttcaataaaaacttactatctaaagtccgtaaagaat 259  Q
    |||||||||| || |||  |||||||||||||||||||||||| ||||||||    
T  41646611 attgaatgcacaagttttcataaaaacttactatctaaagtccttaaagaat 41646662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 24 - 75
Target Start/End: Original strand, 45309587 - 45309638
Alignment:
Q  24 caaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcctta 75  Q
    |||||| |||||||||||||| |||| ||| ||||| |||||||||||||||    
T  45309587 caaaattgcaacttcttgaaatatagagggccaaaagtgcaattaagcctta 45309638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 24 - 74
Target Start/End: Original strand, 8409831 - 8409880
Alignment:
Q  24 caaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcctt 74  Q
    ||||||||||||||||| |||||||  ||||||||||||| ||||||||||    
T  8409831 caaaatcgcaacttcttaaaacata-tgggtcaaaactgctattaagcctt 8409880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 9498962 - 9498908
Alignment:
Q  19 ggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcct 73  Q
    |||||||||||||||||||| ||| || ||||||| ||||||||  |||||||||    
T  9498962 ggggtcaaaatcgcaacttcctgatacttagggggccaaaactgttattaagcct 9498908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 16 - 50
Target Start/End: Original strand, 26889649 - 26889683
Alignment:
Q  16 tagggggtcaaaatcgcaacttcttgaaacatagg 50  Q
    ||||||||||||||||||||||||| |||||||||    
T  26889649 tagggggtcaaaatcgcaacttcttaaaacatagg 26889683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 159 - 237
Target Start/End: Original strand, 32332866 - 32332944
Alignment:
Q  159 aattaagaaattatttattgaaaaagtctaatatttcaatttccgatccattgaatgcataaatttcaataaaaactta 237  Q
    |||||| |||||||| |||||||| || ||||| ||| |||| |||| ||||||||| |||| |||  |||||||||||    
T  32332866 aattaaaaaattattcattgaaaatgtttaatacttcgattttcgatgcattgaatgtataagttttcataaaaactta 32332944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 152 - 250
Target Start/End: Complemental strand, 40464508 - 40464410
Alignment:
Q  152 gattctaaattaagaaattatttattgaaaaagtctaatatttcaatttccgatccattgaatgcataaatttcaataaaaacttactatctaaagtcc 250  Q
    |||||| |||||| ||| |||| |||||||| || |||||||||||||| ||||   ||||||||| || || | ||||||| |||||||  |||||||    
T  40464508 gattctcaattaaaaaactattcattgaaaatgtttaatatttcaattttcgatgttttgaatgcacaagttaccataaaaatttactattcaaagtcc 40464410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 16 - 74
Target Start/End: Complemental strand, 41487256 - 41487198
Alignment:
Q  16 tagggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcctt 74  Q
    ||||||||||||||||||||||| |||||  | |||||  |||||||| ||||||||||    
T  41487256 tagggggtcaaaatcgcaacttcgtgaaaattcgggggcgaaaactgctattaagcctt 41487198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 25 - 74
Target Start/End: Original strand, 521709 - 521758
Alignment:
Q  25 aaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcctt 74  Q
    |||||||||||||| |||||  |||||||| |||||||| ||||||||||    
T  521709 aaaatcgcaacttcgtgaaaattagggggtgaaaactgctattaagcctt 521758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 24 - 73
Target Start/End: Original strand, 1003811 - 1003859
Alignment:
Q  24 caaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcct 73  Q
    |||||| ||||||||||||||||||||||| ||||||||  |||||||||    
T  1003811 caaaattgcaacttcttgaaacataggggg-caaaactgttattaagcct 1003859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 15 - 52
Target Start/End: Complemental strand, 4423086 - 4423049
Alignment:
Q  15 atagggggtcaaaatcgcaacttcttgaaacatagggg 52  Q
    ||||||||||||||||||||||| ||||||| ||||||    
T  4423086 atagggggtcaaaatcgcaactttttgaaacttagggg 4423049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 147 - 212
Target Start/End: Complemental strand, 5020157 - 5020092
Alignment:
Q  147 ttaaggattctaaattaagaaattatttattgaaaaagtctaatatttcaatttccgatccattga 212  Q
    ||||||||||||||  ||||||| ||||  | |||||||| || ||||||||||||||| ||||||    
T  5020157 ttaaggattctaaaagaagaaataattttataaaaaagtcaaagatttcaatttccgatacattga 5020092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 69
Target Start/End: Original strand, 5916914 - 5916967
Alignment:
Q  16 tagggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaa 69  Q
    |||||||  |||||||||||||||| |||||||| ||| ||||| |||||||||    
T  5916914 tagggggcaaaaatcgcaacttcttaaaacatagagggccaaaagtgcaattaa 5916967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 73
Target Start/End: Complemental strand, 10285158 - 10285102
Alignment:
Q  16 tagggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcct 73  Q
    |||||||||||||||||||||| | |||| ||| |||| ||||| |||||||||||||    
T  10285158 tagggggtcaaaatcgcaacttttagaaagata-ggggccaaaaatgcaattaagcct 10285102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 15 - 64
Target Start/End: Complemental strand, 12723318 - 12723269
Alignment:
Q  15 atagggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgca 64  Q
    ||||||||||||||| ||||| | |||||||||||||||| |||| ||||    
T  12723318 atagggggtcaaaattgcaacgttttgaaacatagggggtgaaaagtgca 12723269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 70
Target Start/End: Original strand, 17075016 - 17075065
Alignment:
Q  21 ggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaag 70  Q
    ||||||||||||||||| |  ||| |||||||||||||| ||||||||||    
T  17075016 ggtcaaaatcgcaacttttaaaaagatagggggtcaaaagtgcaattaag 17075065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 70
Target Start/End: Complemental strand, 17573254 - 17573205
Alignment:
Q  21 ggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaag 70  Q
    ||||||||||||||||| |  ||| |||||||||||||| ||||||||||    
T  17573254 ggtcaaaatcgcaacttttaaaaagatagggggtcaaaagtgcaattaag 17573205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 73
Target Start/End: Complemental strand, 20853434 - 20853377
Alignment:
Q  16 tagggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcct 73  Q
    |||||||||||||||||||||||  ||||  |||||||  |||||||| |||||||||    
T  20853434 tagggggtcaaaatcgcaacttcaagaaagttagggggctaaaactgctattaagcct 20853377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 73
Target Start/End: Complemental strand, 31947910 - 31947853
Alignment:
Q  16 tagggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcct 73  Q
    ||||||| |||||||||||||| |  ||| |||||||| ||||| |||||||||||||    
T  31947910 tagggggccaaaatcgcaacttttgaaaagatagggggccaaaagtgcaattaagcct 31947853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 157 - 201
Target Start/End: Complemental strand, 2335843 - 2335799
Alignment:
Q  157 taaattaagaaattatttattgaaaaagtctaatatttcaatttc 201  Q
    ||||||||||||||||||||| ||||| |  ||||||||||||||    
T  2335843 taaattaagaaattatttattaaaaaaattaaatatttcaatttc 2335799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 24 - 72
Target Start/End: Complemental strand, 8347599 - 8347551
Alignment:
Q  24 caaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcc 72  Q
    ||||||| ||||||||| ||||||||| || ||||| ||||||||||||    
T  8347599 caaaatcacaacttcttaaaacataggaggccaaaagtgcaattaagcc 8347551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 25 - 69
Target Start/End: Original strand, 14170704 - 14170748
Alignment:
Q  25 aaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaa 69  Q
    |||||| ||||||||||||| |||||||| ||||||| |||||||    
T  14170704 aaaatctcaacttcttgaaatatagggggccaaaactacaattaa 14170748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 16 - 72
Target Start/End: Complemental strand, 18539188 - 18539133
Alignment:
Q  16 tagggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcc 72  Q
    ||||||| |||||||||||||| | |||| ||| |||||||||| ||||||||||||    
T  18539188 tagggggccaaaatcgcaacttttagaaagata-ggggtcaaaagtgcaattaagcc 18539133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 17 - 73
Target Start/End: Original strand, 34602435 - 34602491
Alignment:
Q  17 agggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcct 73  Q
    |||||| |||||| ||||||| |||||||||||| ||| |||| |||| ||||||||    
T  34602435 agggggccaaaattgcaactttttgaaacataggaggtgaaaattgcatttaagcct 34602491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 25 - 73
Target Start/End: Original strand, 41602878 - 41602926
Alignment:
Q  25 aaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcct 73  Q
    ||||||||||||| ||||||| |||||||  |||||||| |||||||||    
T  41602878 aaaatcgcaactttttgaaacttagggggctaaaactgctattaagcct 41602926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 53; Significance: 3e-21; HSPs: 56)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 147 - 248
Target Start/End: Original strand, 46506326 - 46506429
Alignment:
Q  147 ttaaggattctaaattaagaaattatttattgaaaaag--tctaatatttcaatttccgatccattgaatgcataaatttcaataaaaacttactatcta 244  Q
    ||||||||||| |||||||||| ||||||||||||||   ||||||| ||||||||||||| |||| |||| ||||||||| | |||| |||||||||||    
T  46506326 ttaaggattcttaattaagaaactatttattgaaaaaaaatctaatacttcaatttccgatgcattaaatggataaatttccacaaaagcttactatcta 46506425  T
Q  245 aagt 248  Q
    ||||    
T  46506426 aagt 46506429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 147 - 246
Target Start/End: Original strand, 19652634 - 19652733
Alignment:
Q  147 ttaaggattctaaattaagaaattatttattgaaaaagtctaatatttcaatttccgatccattgaatgcataaatttcaataaaaacttactatctaaa 246  Q
    |||||| ||||||||||||| |||||| |||||||| || ||||| || ||||||| || ||||||||||| ||||||  ||||||||||||||||||||    
T  19652634 ttaaggtttctaaattaagatattattcattgaaaatgtataatagtttaatttccaatgcattgaatgcacaaattttcataaaaacttactatctaaa 19652733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 159 - 248
Target Start/End: Original strand, 7388788 - 7388877
Alignment:
Q  159 aattaagaaattatttattgaaaaagtctaatatttcaatttccgatccattgaatgcataaatttcaataaaaacttactatctaaagt 248  Q
    |||||||||| |||  |||||||||||||||| || ||||||||||| |||| |||||| || |||| ||||||| ||||||||||||||    
T  7388788 aattaagaaaatatccattgaaaaagtctaatgttccaatttccgatgcattaaatgcacaagtttccataaaaatttactatctaaagt 7388877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 159 - 260
Target Start/End: Original strand, 38380471 - 38380572
Alignment:
Q  159 aattaagaaattatttattgaaaaagtctaatatttcaatttccgatccattgaatgcataaatttcaataaaaacttactatctaaagtccgtaaagaa 258  Q
    |||||| ||||| ||  |||||||||| ||| | ||||||||||||  |||| ||||||||| |||| ||||||| ||||||| |||||||| |||||||    
T  38380471 aattaataaatttttctttgaaaaagtttaacacttcaatttccgaagcattaaatgcataattttccataaaaatttactatttaaagtccttaaagaa 38380570  T
Q  259 tg 260  Q
    ||    
T  38380571 tg 38380572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 159 - 284
Target Start/End: Complemental strand, 38949152 - 38949027
Alignment:
Q  159 aattaagaaattatttattgaaaaagtctaatatttcaatttccgatccattgaatgcataaatttcaataaaaacttactatctaaagtccgtaaagaa 258  Q
    |||||| ||||||||| || ||||| | ||| | ||||||||||||| ||||||||||| || |||  ||||||| ||||||| | |||||| ||||||     
T  38949152 aattaaaaaattatttcttaaaaaaatttaacacttcaatttccgatgcattgaatgcacaatttttcataaaaatttactatttcaagtccttaaagag 38949053  T
Q  259 tgaccttagaaaactccttaacattt 284  Q
    || ||||| || |||| |||||||||    
T  38949052 tgcccttaaaacactcgttaacattt 38949027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 16 - 71
Target Start/End: Complemental strand, 1139212 - 1139157
Alignment:
Q  16 tagggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagc 71  Q
    |||||||  ||||||||||||||||||| ||||||||||||||| |||||||||||    
T  1139212 tagggggcaaaaatcgcaacttcttgaaccatagggggtcaaaagtgcaattaagc 1139157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 166 - 237
Target Start/End: Complemental strand, 40781496 - 40781425
Alignment:
Q  166 aaattatttattgaaaaagtctaatatttcaatttccgatccattgaatgcataaatttcaataaaaactta 237  Q
    |||||||||||||||||||| ||||  || |||||| ||| ||||||||||||| ||||| |||||||||||    
T  40781496 aaattatttattgaaaaagtttaatgctttaatttctgatgcattgaatgcatagatttccataaaaactta 40781425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 13388214 - 13388160
Alignment:
Q  19 ggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcct 73  Q
    |||| ||||||| | |||||||||||||||||||| |||||||||||||||||||    
T  13388214 ggggccaaaatctctacttcttgaaacatagggggccaaaactgcaattaagcct 13388160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 16 - 74
Target Start/End: Original strand, 53061806 - 53061864
Alignment:
Q  16 tagggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcctt 74  Q
    ||||||||||||||||||||||||| ||||||| ||| |||||  ||||||||||||||    
T  53061806 tagggggtcaaaatcgcaacttcttaaaacatatgggatcaaaggtgcaattaagcctt 53061864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 16 - 73
Target Start/End: Complemental strand, 31760822 - 31760765
Alignment:
Q  16 tagggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcct 73  Q
    ||||||| ||||||| ||||||||| ||||||||| |||||||| |||||||||||||    
T  31760822 tagggggccaaaatcacaacttcttaaaacataggaggtcaaaagtgcaattaagcct 31760765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 16 - 73
Target Start/End: Complemental strand, 41148221 - 41148164
Alignment:
Q  16 tagggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcct 73  Q
    |||||||  ||||||| ||||||||||||||||||||| ||||||||| |||||||||    
T  41148221 tagggggctaaaatcggaacttcttgaaacatagggggccaaaactgctattaagcct 41148164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 24 - 72
Target Start/End: Complemental strand, 53831200 - 53831152
Alignment:
Q  24 caaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcc 72  Q
    ||||||||||||||||| |||||||||||| ||||||||| ||||||||    
T  53831200 caaaatcgcaacttcttaaaacatagggggccaaaactgctattaagcc 53831152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 159 - 250
Target Start/End: Original strand, 32893024 - 32893115
Alignment:
Q  159 aattaagaaattatttattgaaaaagtctaatatttcaatttccgatccattgaatgcataaatttcaataaaaacttactatctaaagtcc 250  Q
    ||||||||| |||||| |  ||||||| ||| |||||||||| |||| ||||||||||| || |||| ||||||  ||||||| ||||||||    
T  32893024 aattaagaatttatttttaaaaaaagtttaacatttcaattttcgatgcattgaatgcacaattttctataaaagtttactatttaaagtcc 32893115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 16 - 71
Target Start/End: Complemental strand, 33641907 - 33641852
Alignment:
Q  16 tagggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagc 71  Q
    |||| |||||||||||||| ||||| ||||||| |||| |||||||||||||||||    
T  33641907 taggaggtcaaaatcgcaatttcttaaaacataaggggccaaaactgcaattaagc 33641852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 16 - 75
Target Start/End: Original strand, 49804354 - 49804412
Alignment:
Q  16 tagggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcctta 75  Q
    |||||| |||||||||||||||||||||| ||| |||||||||| ||| |||||||||||    
T  49804354 taggggatcaaaatcgcaacttcttgaaatata-ggggtcaaaattgctattaagcctta 49804412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 25 - 71
Target Start/End: Original strand, 8672013 - 8672059
Alignment:
Q  25 aaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagc 71  Q
    |||||||||||||||||||||||| |||| ||||| |||||||||||    
T  8672013 aaaatcgcaacttcttgaaacataaggggccaaaagtgcaattaagc 8672059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 147 - 233
Target Start/End: Complemental strand, 24916468 - 24916382
Alignment:
Q  147 ttaaggattctaaattaagaaattatttattgaaaaagtctaatatttcaatttccgatccattgaatgcataaatttcaataaaaa 233  Q
    ||||||||||| |||||||||| |||| ||||||||  || |||| ||||||| | |||||||||||| || || |||| |||||||    
T  24916468 ttaaggattctcaattaagaaaatattcattgaaaatatccaatacttcaattcctgatccattgaatacacaagtttctataaaaa 24916382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 16 - 74
Target Start/End: Complemental strand, 51543000 - 51542942
Alignment:
Q  16 tagggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcctt 74  Q
    ||||||||||||||||||| || || ||||||||  |||||||| ||||||||||||||    
T  51543000 tagggggtcaaaatcgcaattttttaaaacatagatggtcaaaagtgcaattaagcctt 51542942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 163 - 248
Target Start/End: Original strand, 5047221 - 5047306
Alignment:
Q  163 aagaaattatttattgaaaaagtctaatatttcaatttccgatccattgaatgcataaatttcaataaaaacttactatctaaagt 248  Q
    ||||||||||| |||  ||||||| || |||||||||||| || |||||| | |||||| || || ||||||||||||| ||||||    
T  5047221 aagaaattattcattacaaaagtcaaaaatttcaatttccaatgcattgatttcataaactttaaaaaaaacttactatttaaagt 5047306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 20 - 73
Target Start/End: Original strand, 21552919 - 21552972
Alignment:
Q  20 gggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcct 73  Q
    |||||||||||| ||||||||||||||||||  | ||||||||| |||||||||    
T  21552919 gggtcaaaatcgtaacttcttgaaacataggttgccaaaactgctattaagcct 21552972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 24 - 73
Target Start/End: Complemental strand, 38828556 - 38828507
Alignment:
Q  24 caaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcct 73  Q
    ||||||||||||||||| |||||||| ||| ||||| |||||||||||||    
T  38828556 caaaatcgcaacttcttaaaacatagagggccaaaagtgcaattaagcct 38828507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 158 - 255
Target Start/End: Complemental strand, 41370262 - 41370165
Alignment:
Q  158 aaattaagaaattatttattgaaaaagtctaatatttcaatttccgatccattgaatgcataaatttcaataaaaacttactatctaaagtccgtaaa 255  Q
    ||||||||||||||||| |  |||||||  ||||||||||||| | || |||||| | || ||||||  |||||||||||||||  ||||||| ||||    
T  41370262 aaattaagaaattatttctcaaaaaagttaaatatttcaattttcaatgcattgattacacaaattttcataaaaacttactattcaaagtccttaaa 41370165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 47742287 - 47742234
Alignment:
Q  16 tagggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaa 69  Q
    ||||||| ||||||||||||||| ||||||||||| || ||||||||| |||||    
T  47742287 tagggggccaaaatcgcaacttcctgaaacataggtggacaaaactgctattaa 47742234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 16 - 69
Target Start/End: Original strand, 47742602 - 47742655
Alignment:
Q  16 tagggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaa 69  Q
    |||||||  ||||||| |||||||| |||||||||||||||||||||| |||||    
T  47742602 tagggggctaaaatcgtaacttcttaaaacatagggggtcaaaactgctattaa 47742655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 14 - 74
Target Start/End: Original strand, 6033899 - 6033959
Alignment:
Q  14 catagggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcctt 74  Q
    |||| |||| ||||||||||||||||| ||| |||||||| ||||| ||| ||||||||||    
T  6033899 catatggggccaaaatcgcaacttcttaaaatatagggggccaaaaatgcgattaagcctt 6033959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 24 - 72
Target Start/End: Complemental strand, 30064050 - 30064002
Alignment:
Q  24 caaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcc 72  Q
    ||||||||||||||||| |||||||||||| ||||||| | ||||||||    
T  30064050 caaaatcgcaacttcttaaaacatagggggccaaaacttctattaagcc 30064002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 147 - 255
Target Start/End: Complemental strand, 49011988 - 49011880
Alignment:
Q  147 ttaaggattctaaattaagaaattatttattgaaaaagtctaatatttcaatttccgatccattgaatgcataaatttcaataaaaacttactatctaaa 246  Q
    ||||||||| | ||| |||||  |||| ||| ||||||| ||||| |||||||| |||| |||| |||||| || |||  | ||||||||||||| ||||    
T  49011988 ttaaggatttttaatcaagaatctattcattaaaaaagtttaatacttcaattttcgatgcattaaatgcacaagttttcacaaaaacttactatttaaa 49011889  T
Q  247 gtccgtaaa 255  Q
    |||| ||||    
T  49011888 gtccttaaa 49011880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 25 - 73
Target Start/End: Original strand, 53578922 - 53578970
Alignment:
Q  25 aaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcct 73  Q
    |||||||||||||||| |||||||||||| |||||| || |||||||||    
T  53578922 aaaatcgcaacttcttaaaacatagggggccaaaacggctattaagcct 53578970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 24 - 74
Target Start/End: Original strand, 1140631 - 1140682
Alignment:
Q  24 caaaatcgcaacttcttgaaacata-gggggtcaaaactgcaattaagcctt 74  Q
    ||||||||||||||||||||||||| ||||| ||||| |||| |||||||||    
T  1140631 caaaatcgcaacttcttgaaacataggggggccaaaagtgcatttaagcctt 1140682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 21 - 72
Target Start/End: Original strand, 6979688 - 6979739
Alignment:
Q  21 ggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcc 72  Q
    ||||||||||||||||| |||||||||||| ||| |||| |||| |||||||    
T  6979688 ggtcaaaatcgcaactttttgaaacataggaggtgaaaagtgcatttaagcc 6979739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 24 - 71
Target Start/End: Complemental strand, 8143081 - 8143034
Alignment:
Q  24 caaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagc 71  Q
    ||||||||||||||||| ||||||||| || ||||| |||||||||||    
T  8143081 caaaatcgcaacttcttaaaacataggaggccaaaagtgcaattaagc 8143034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 71
Target Start/End: Original strand, 8144384 - 8144439
Alignment:
Q  16 tagggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagc 71  Q
    |||||||||||||||  ||||||||||||||||||||   |||| |||||||||||    
T  8144384 tagggggtcaaaatcataacttcttgaaacataggggactaaaattgcaattaagc 8144439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 24 - 74
Target Start/End: Original strand, 14816873 - 14816924
Alignment:
Q  24 caaaatcgcaacttcttgaaacataggggg-tcaaaactgcaattaagcctt 74  Q
    |||||||||||||||| |||||||||||||  ||||| ||||||||||||||    
T  14816873 caaaatcgcaacttctagaaacatagggggaccaaaagtgcaattaagcctt 14816924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 147 - 202
Target Start/End: Complemental strand, 30978753 - 30978698
Alignment:
Q  147 ttaaggattctaaattaagaaattatttattgaaaaagtctaatatttcaatttcc 202  Q
    ||||| |||| |||||||||||| ||||||| |||||||| |||| ||||||||||    
T  30978753 ttaagcattccaaattaagaaatgatttattaaaaaagtcaaatagttcaatttcc 30978698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 25 - 72
Target Start/End: Original strand, 55318047 - 55318094
Alignment:
Q  25 aaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcc 72  Q
    ||||||| |||||||| |||||||||||| ||||| ||||||||||||    
T  55318047 aaaatcgtaacttcttaaaacatagggggccaaaagtgcaattaagcc 55318094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 16 - 74
Target Start/End: Complemental strand, 3369903 - 3369845
Alignment:
Q  16 tagggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcctt 74  Q
    ||||||| ||||||||||||||||||| || |||||||  |||||||  ||||||||||    
T  3369903 tagggggccaaaatcgcaacttcttgatacttagggggcaaaaactgatattaagcctt 3369845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 154 - 232
Target Start/End: Complemental strand, 23133146 - 23133068
Alignment:
Q  154 ttctaaattaagaaattatttattgaaaaagtctaatatttcaatttccgatccattgaatgcataaatttcaataaaa 232  Q
    |||| |||||||||||||||  || ||||||| ||| | ||||||||||||| |||||||| || || |||| ||||||    
T  23133146 ttctcaattaagaaattattccttaaaaaagtttaacacttcaatttccgatgcattgaatacacaattttctataaaa 23133068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 15 - 53
Target Start/End: Original strand, 27018461 - 27018499
Alignment:
Q  15 atagggggtcaaaatcgcaacttcttgaaacataggggg 53  Q
    ||||||||||||||||||||| | |||||||||||||||    
T  27018461 atagggggtcaaaatcgcaacattttgaaacataggggg 27018499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 30627034 - 30627088
Alignment:
Q  19 ggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcct 73  Q
    ||||||||||||| ||||| |||| || |||||||| |||||||| |||||||||    
T  30627034 ggggtcaaaatcgtaactttttgatacttagggggtgaaaactgctattaagcct 30627088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 163 - 233
Target Start/End: Complemental strand, 31871144 - 31871074
Alignment:
Q  163 aagaaattatttattgaaaaagtctaatatttcaatttccgatccattgaatgcataaatttcaataaaaa 233  Q
    ||||||||||||  | |||||||  |||||||||||||||||| |||||| | ||||||||| || |||||    
T  31871144 aagaaattattttataaaaaagtaaaatatttcaatttccgatgcattgattacataaatttaaaaaaaaa 31871074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 179 - 249
Target Start/End: Complemental strand, 36721659 - 36721589
Alignment:
Q  179 aaaaagtctaatatttcaatttccgatccattgaatgcataaatttcaataaaaacttactatctaaagtc 249  Q
    |||||||| ||||||||||||  | || |||||| | || ||||||| ||||||||||||||| |||||||    
T  36721659 aaaaagtcaaatatttcaattctcaatgcattgattacacaaatttccataaaaacttactatttaaagtc 36721589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 159 - 217
Target Start/End: Original strand, 40071322 - 40071380
Alignment:
Q  159 aattaagaaattatttattgaaaaagtctaatatttcaatttccgatccattgaatgca 217  Q
    ||||||||||||||  |||||||||||| |||| |||||||||| |  |||||||||||    
T  40071322 aattaagaaattatgcattgaaaaagtccaatacttcaatttccaacgcattgaatgca 40071380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 20 - 74
Target Start/End: Original strand, 53312547 - 53312601
Alignment:
Q  20 gggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcctt 74  Q
    ||||||||||||||||||| |||||  |||||||| |||||||  ||||||||||    
T  53312547 gggtcaaaatcgcaacttcgtgaaagttagggggtgaaaactgttattaagcctt 53312601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 16 - 74
Target Start/End: Original strand, 53831318 - 53831375
Alignment:
Q  16 tagggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcctt 74  Q
    |||| |||||||||||||||||||| ||||||| |||| ||||||||| | ||||||||    
T  53831318 taggaggtcaaaatcgcaacttcttaaaacata-ggggacaaaactgctagtaagcctt 53831375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 24 - 69
Target Start/End: Original strand, 5548019 - 5548064
Alignment:
Q  24 caaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaa 69  Q
    ||||||||||||||||| ||||||||| || ||||||||| |||||    
T  5548019 caaaatcgcaacttcttaaaacataggaggccaaaactgctattaa 5548064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 69
Target Start/End: Original strand, 31761860 - 31761913
Alignment:
Q  16 tagggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaa 69  Q
    ||||||| |||||||| |||||||||||| |||||||| ||||| | |||||||    
T  31761860 tagggggccaaaatcgtaacttcttgaaatatagggggccaaaagtacaattaa 31761913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 24 - 73
Target Start/End: Original strand, 35393935 - 35393984
Alignment:
Q  24 caaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcct 73  Q
    ||||||||||||||| |||||  |||||||| |||||||| |||||||||    
T  35393935 caaaatcgcaacttcgtgaaagttagggggtgaaaactgctattaagcct 35393984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 72
Target Start/End: Original strand, 36413968 - 36414021
Alignment:
Q  19 ggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcc 72  Q
    ||||| ||||||||||||| | |||| |||||||| ||||| ||||||||||||    
T  36413968 ggggtgaaaatcgcaacttttggaaagatagggggccaaaagtgcaattaagcc 36414021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 37831648 - 37831595
Alignment:
Q  16 tagggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaa 69  Q
    ||||||| ||||||||||||||||| |||| |||||||  |||||||| |||||    
T  37831648 tagggggccaaaatcgcaacttcttaaaacttagggggctaaaactgctattaa 37831595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 173 - 246
Target Start/End: Original strand, 40062309 - 40062382
Alignment:
Q  173 ttattgaaaaagtctaatatttcaatttccgatccattgaatgcataaatttcaataaaaacttactatctaaa 246  Q
    |||||||||||||  ||||||||| ||||| || |||||||||||  |||||| ||||||| ||| ||| ||||    
T  40062309 ttattgaaaaagttcaatatttcattttccaatgcattgaatgcacgaatttctataaaaatttattatttaaa 40062382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 44121045 - 44121102
Alignment:
Q  16 tagggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcct 73  Q
    |||||||||||||||||||||| |  ||| |||||||| ||||| || ||||||||||    
T  44121045 tagggggtcaaaatcgcaacttttgaaaagatagggggccaaaagtgtaattaagcct 44121102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 172 - 241
Target Start/End: Original strand, 50247943 - 50248012
Alignment:
Q  172 tttattgaaaaagtctaatatttcaatttccgatccattgaatgcataaatttcaataaaaacttactat 241  Q
    ||||||||||||||  |||| || ||||| | || |||||||| ||| |||||| |||||||||||||||    
T  50247943 tttattgaaaaagttaaatagttaaattttcaatgcattgaattcattaatttctataaaaacttactat 50248012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 153 - 237
Target Start/End: Complemental strand, 23016321 - 23016237
Alignment:
Q  153 attctaaattaagaaattatttattgaaaaagtctaatatttcaatttccgatccattgaatgcataaatttcaataaaaactta 237  Q
    |||| ||||||||||||||||  || || ||||| || |||||||||||| || |||||||| |||| | ||  |||||||||||    
T  23016321 attccaaattaagaaattattatttaaagaagtcaaacatttcaatttccaatgcattgaatacatagacttttataaaaactta 23016237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 24 - 72
Target Start/End: Original strand, 29776885 - 29776933
Alignment:
Q  24 caaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcc 72  Q
    ||||||| || |||||| |||||||||||| ||||| ||||||||||||    
T  29776885 caaaatcacagcttcttaaaacatagggggccaaaagtgcaattaagcc 29776933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 25 - 73
Target Start/End: Original strand, 35830312 - 35830360
Alignment:
Q  25 aaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcct 73  Q
    |||||| ||||||||||||| ||||| || ||||||||| |||||||||    
T  35830312 aaaatcacaacttcttgaaatataggaggccaaaactgctattaagcct 35830360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 147 - 247
Target Start/End: Complemental strand, 40480275 - 40480175
Alignment:
Q  147 ttaaggattctaaattaagaaattatttattgaaaaagtctaatatttcaatttccgatccattgaatgcataaatttcaataaaaacttactatctaaa 246  Q
    |||||||| |||||  |||||||||| |  | |||||||| |||||||||||| ||||| |||||| | |||||| ||    ||||||||||||| ||||    
T  40480275 ttaaggatgctaaaagaagaaattatgtcataaaaaagtcaaatatttcaattcccgatacattgattacataaactttttaaaaaacttactatttaaa 40480176  T
Q  247 g 247  Q
    |    
T  40480175 g 40480175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0172 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 159 - 266
Target Start/End: Original strand, 13478 - 13585
Alignment:
Q  159 aattaagaaattatttattgaaaaagtctaatatttcaatttccgatccattgaatgcataaatttcaataaaaacttactatctaaagtccgtaaagaa 258  Q
    |||||||||| |||| ||||||||||||||||| ||||||||||||| | ||||||||| || |||| |||||||| |||||||| |||||  ||||||     
T  13478 aattaagaaactattcattgaaaaagtctaatacttcaatttccgatgctttgaatgcacaagtttccataaaaacctactatctcaagtctttaaagag 13577  T
Q  259 tgacctta 266  Q
    || |||||    
T  13578 tgccctta 13585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 50; Significance: 2e-19; HSPs: 58)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 16 - 73
Target Start/End: Complemental strand, 7873565 - 7873508
Alignment:
Q  16 tagggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcct 73  Q
    ||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  7873565 tagggggccaaaatcgcaactccttgaaacatagggggtcaaaactgcaattaagcct 7873508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 16 - 72
Target Start/End: Complemental strand, 10691354 - 10691298
Alignment:
Q  16 tagggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcc 72  Q
    ||||||| |||||||||||||||||||||||||||||| ||||| ||||||||||||    
T  10691354 tagggggccaaaatcgcaacttcttgaaacatagggggccaaaattgcaattaagcc 10691298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 30283459 - 30283405
Alignment:
Q  19 ggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcct 73  Q
    |||| ||||||||||||||||||||||||| ||||| ||||||||||||||||||    
T  30283459 ggggccaaaatcgcaacttcttgaaacataaggggtaaaaactgcaattaagcct 30283405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 282859 - 282916
Alignment:
Q  16 tagggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcct 73  Q
    ||||||| ||||||||||||||||||||||||||| || ||||||||| |||||||||    
T  282859 tagggggccaaaatcgcaacttcttgaaacataggaggccaaaactgctattaagcct 282916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 327436 - 327493
Alignment:
Q  16 tagggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcct 73  Q
    ||||||| |||||||||||||||||||||||||||||| || |||||| |||||||||    
T  327436 tagggggccaaaatcgcaacttcttgaaacatagggggccacaactgctattaagcct 327493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 16 - 69
Target Start/End: Original strand, 10691647 - 10691700
Alignment:
Q  16 tagggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaa 69  Q
    ||||||| |||||||| |||||||||||||||||||||| ||||||||||||||    
T  10691647 tagggggccaaaatcgtaacttcttgaaacatagggggtaaaaactgcaattaa 10691700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 147 - 267
Target Start/End: Original strand, 6771838 - 6771958
Alignment:
Q  147 ttaaggattctaaattaagaaattatttattgaaaaagtctaatatttcaatttccgatccattgaatgcataaatttcaataaaaacttactatctaaa 246  Q
    |||||| |||| |||||||||||||||  ||||||||    |  |||||||||||||||  |||||||||| || |||| ||||||| ||||||| ||||    
T  6771838 ttaaggtttctcaattaagaaattattctttgaaaaaactcaccatttcaatttccgatatattgaatgcacaattttccataaaaatttactatttaaa 6771937  T
Q  247 gtccgtaaagaatgaccttag 267  Q
    |||| |||||| || ||||||    
T  6771938 gtccttaaagagtgtccttag 6771958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 24 - 72
Target Start/End: Complemental strand, 29933238 - 29933190
Alignment:
Q  24 caaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcc 72  Q
    ||||||||||||||||||||||||||| |||||||||||| ||||||||    
T  29933238 caaaatcgcaacttcttgaaacataggaggtcaaaactgctattaagcc 29933190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 159 - 257
Target Start/End: Original strand, 3298231 - 3298329
Alignment:
Q  159 aattaagaaattatttattgaaaaagtctaatatttcaatttccgatccattgaatgcataaatttcaataaaaacttactatctaaagtccgtaaaga 257  Q
    |||||||||| |||| ||||||||||  | ||||||||||||| ||| |||||||||| ||| |||| ||||||| |||  ||||||||| | ||||||    
T  3298231 aattaagaaactattcattgaaaaagcttcatatttcaatttctgatgcattgaatgcttaagtttccataaaaatttaacatctaaagttcttaaaga 3298329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 24 - 74
Target Start/End: Original strand, 7873897 - 7873947
Alignment:
Q  24 caaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcctt 74  Q
    ||||||| ||| |||||||||||||||||| ||||||||||||||||||||    
T  7873897 caaaatcacaatttcttgaaacatagggggccaaaactgcaattaagcctt 7873947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 16 - 74
Target Start/End: Original strand, 43078061 - 43078119
Alignment:
Q  16 tagggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcctt 74  Q
    ||||||| ||||||||||||||||||||||| |||||| |||| |||| ||||||||||    
T  43078061 tagggggccaaaatcgcaacttcttgaaacagagggggccaaatctgctattaagcctt 43078119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 159 - 288
Target Start/End: Complemental strand, 44319948 - 44319819
Alignment:
Q  159 aattaagaaattatttattgaaaaagtctaatatttcaatttccgatccattgaatgcataaatttcaataaaaacttactatctaaagtccgtaaagaa 258  Q
    |||||||||||||||| || ||||||| ||| | || ||||| |||| |||| |||||| || || | ||||||| ||| ||| |||||||| |||| ||    
T  44319948 aattaagaaattatttttttaaaaagtttaacactttaattttcgatgcattaaatgcacaatttcccataaaaatttattatttaaagtccttaaataa 44319849  T
Q  259 tgaccttagaaaactccttaacattttcca 288  Q
    ||  || |||| |||| |||||||||||||    
T  44319848 tgctctaagaatactcgttaacattttcca 44319819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 16 - 72
Target Start/End: Original strand, 24679102 - 24679158
Alignment:
Q  16 tagggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcc 72  Q
    ||||||| ||||||||||| |||||||||||||||||| ||||||||  ||||||||    
T  24679102 tagggggccaaaatcgcaatttcttgaaacatagggggccaaaactgttattaagcc 24679158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 19 - 74
Target Start/End: Original strand, 21954335 - 21954390
Alignment:
Q  19 ggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcctt 74  Q
    |||| |||||||||||||| | |||| |||||||||||||| ||||||||||||||    
T  21954335 ggggccaaaatcgcaacttttggaaagatagggggtcaaaagtgcaattaagcctt 21954390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 16 - 70
Target Start/End: Original strand, 9477448 - 9477502
Alignment:
Q  16 tagggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaag 70  Q
    ||||||| |||||||||||||| || ||||||||| |||||||||||| ||||||    
T  9477448 tagggggccaaaatcgcaactttttaaaacataggaggtcaaaactgctattaag 9477502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 16 - 74
Target Start/End: Original strand, 42438034 - 42438092
Alignment:
Q  16 tagggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcctt 74  Q
    ||||||| ||||||||||||||||||||| |||| ||| ||||| ||||||||| ||||    
T  42438034 tagggggccaaaatcgcaacttcttgaaatatagagggccaaaagtgcaattaaacctt 42438092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 16 - 74
Target Start/End: Original strand, 43092038 - 43092096
Alignment:
Q  16 tagggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcctt 74  Q
    ||||||| |||||| | ||||||||||||||||||||| |||| |||| ||||||||||    
T  43092038 tagggggccaaaattgtaacttcttgaaacatagggggccaaatctgctattaagcctt 43092096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 21939332 - 21939389
Alignment:
Q  16 tagggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcct 73  Q
    ||||||| ||||||||||||||| ||| || ||||||| ||||||||| |||||||||    
T  21939332 tagggggccaaaatcgcaacttcgtgatacttagggggccaaaactgctattaagcct 21939389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 24 - 69
Target Start/End: Complemental strand, 26974278 - 26974233
Alignment:
Q  24 caaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaa 69  Q
    ||||||||||||||||||||| |||||||| ||||| |||||||||    
T  26974278 caaaatcgcaacttcttgaaatatagggggccaaaagtgcaattaa 26974233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 24 - 73
Target Start/End: Original strand, 29933539 - 29933588
Alignment:
Q  24 caaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcct 73  Q
    ||||||||||||||||| |||||||| ||||||||||||  |||||||||    
T  29933539 caaaatcgcaacttcttaaaacatagagggtcaaaactgttattaagcct 29933588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 147 - 224
Target Start/End: Complemental strand, 36061607 - 36061530
Alignment:
Q  147 ttaaggattctaaattaagaaattatttattgaaaaagtctaatatttcaatttccgatccattgaatgcataaattt 224  Q
    ||||||||||||||  ||||||||||||||| |||||||| |||| | | |||||| || |||||||| || ||||||    
T  36061607 ttaaggattctaaagcaagaaattatttattaaaaaagtcaaatactactatttccaatgcattgaatacacaaattt 36061530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 152 - 201
Target Start/End: Original strand, 39170331 - 39170380
Alignment:
Q  152 gattctaaattaagaaattatttattgaaaaagtctaatatttcaatttc 201  Q
    |||| ||||||||||||||||||||| ||||||| |||| ||||||||||    
T  39170331 gattgtaaattaagaaattatttattcaaaaagtttaatgtttcaatttc 39170380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 17 - 73
Target Start/End: Original strand, 5490924 - 5490980
Alignment:
Q  17 agggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcct 73  Q
    |||||| |||||| ||||||| |||||||||||||||| |||| |||| ||||||||    
T  5490924 agggggccaaaattgcaactttttgaaacatagggggtgaaaagtgcatttaagcct 5490980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 147 - 246
Target Start/End: Original strand, 24557734 - 24557833
Alignment:
Q  147 ttaaggattc-taaattaagaaattatttattgaaaaagtctaatatttcaatttccgatccattgaatgcataaatttcaataaaaacttactatctaa 245  Q
    |||||||||| | |||||| |||||||||||| ||||||||||||| |||||||| | || ||||| |||||  |||||  | ||||||||||| |||||    
T  24557734 ttaaggattcctcaattaaaaaattatttattaaaaaagtctaatacttcaattttcaatacattgtatgca-caatttacacaaaaacttactttctaa 24557832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 15 - 75
Target Start/End: Complemental strand, 27869253 - 27869193
Alignment:
Q  15 atagggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcctta 75  Q
    ||||||||||||||||||||| | |||||||||||||||  |||| |||| || |||||||    
T  27869253 atagggggtcaaaatcgcaacattttgaaacatagggggcgaaaagtgcactttagcctta 27869193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 16 - 72
Target Start/End: Original strand, 31530376 - 31530432
Alignment:
Q  16 tagggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcc 72  Q
    ||||||||||||||| |||||| | |||| |||||||| ||||| ||||||||||||    
T  31530376 tagggggtcaaaatcccaacttttggaaagatagggggccaaaagtgcaattaagcc 31530432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 19 - 75
Target Start/End: Original strand, 40139821 - 40139877
Alignment:
Q  19 ggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcctta 75  Q
    |||| |||||||||||||| | |||| |||||||| ||||| |||||||||||||||    
T  40139821 ggggccaaaatcgcaacttttagaaagatagggggccaaaagtgcaattaagcctta 40139877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 24 - 72
Target Start/End: Complemental strand, 42436877 - 42436829
Alignment:
Q  24 caaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcc 72  Q
    |||||||| |||||||| |||||||||||| ||||| ||||||||||||    
T  42436877 caaaatcgtaacttcttaaaacatagggggccaaaaatgcaattaagcc 42436829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 74
Target Start/End: Original strand, 20636865 - 20636924
Alignment:
Q  15 atagggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcctt 74  Q
    ||||||||||||||||||||| | |||||||||||||||  |||| |||| || ||||||    
T  20636865 atagggggtcaaaatcgcaacattttgaaacatagggggcgaaaagtgcactttagcctt 20636924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 74
Target Start/End: Original strand, 21202862 - 21202917
Alignment:
Q  19 ggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcctt 74  Q
    ||||||||||||||||||| | |||| |||||||| ||||| ||||||||| ||||    
T  21202862 ggggtcaaaatcgcaacttttggaaagatagggggccaaaagtgcaattaaacctt 21202917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 59
Target Start/End: Original strand, 30283723 - 30283766
Alignment:
Q  16 tagggggtcaaaatcgcaacttcttgaaacatagggggtcaaaa 59  Q
    |||||||||||||||||||||| |||| |||||||||| |||||    
T  30283723 tagggggtcaaaatcgcaactttttgatacatagggggccaaaa 30283766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 74
Target Start/End: Complemental strand, 30503759 - 30503704
Alignment:
Q  19 ggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcctt 74  Q
    |||| |||||||||||||| || |||||||||| | ||||| ||||||||||||||    
T  30503759 gggggcaaaatcgcaactttttaaaacatagggtgccaaaagtgcaattaagcctt 30503704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 162 - 257
Target Start/End: Complemental strand, 31902839 - 31902744
Alignment:
Q  162 taagaaattatttattgaaaaagtctaatatttcaatttccgatccattgaatgcataaatttcaataaaaacttactatctaaagtccgtaaaga 257  Q
    ||||||||||||  || | |||||| ||||||||||||| | || |||||| | || || |||| ||||||| ||||||| |||||||| ||||||    
T  31902839 taagaaattattccttaagaaagtcaaatatttcaattttcaatacattgactacacaattttccataaaaatttactatttaaagtccttaaaga 31902744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 75
Target Start/End: Complemental strand, 33159540 - 33159481
Alignment:
Q  16 tagggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcctta 75  Q
    ||||||| |||||||||||||| |  ||| ||||||||| |||| |||||||||||||||    
T  33159540 tagggggccaaaatcgcaacttttaaaaagatagggggttaaaagtgcaattaagcctta 33159481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 75
Target Start/End: Original strand, 46266511 - 46266570
Alignment:
Q  16 tagggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcctta 75  Q
    ||||||| |||||| ||||||||||||||| ||||| |  |||||||| |||||||||||    
T  46266511 taggggggcaaaattgcaacttcttgaaacttagggagctaaaactgctattaagcctta 46266570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 16 - 74
Target Start/End: Complemental strand, 18201410 - 18201352
Alignment:
Q  16 tagggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcctt 74  Q
    ||||||| |||||||||||||| | |||| |||| ||| ||||| ||||||||||||||    
T  18201410 tagggggccaaaatcgcaacttttagaaagatagtgggccaaaagtgcaattaagcctt 18201352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 147 - 241
Target Start/End: Original strand, 34681693 - 34681787
Alignment:
Q  147 ttaaggattctaaattaagaaattatttattgaaaaagtctaatatttcaatttccgatccattgaatgcataaatttcaataaaaacttactat 241  Q
    ||||| ||||||||||| |||||||||| ||  ||||||| |||| |||||||||| || |||| ||| || || |||  ||||||| |||||||    
T  34681693 ttaagcattctaaattaggaaattattttttacaaaagtcaaatagttcaatttccaatgcattaaatacacaagtttttataaaaagttactat 34681787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 16 - 74
Target Start/End: Complemental strand, 40139585 - 40139527
Alignment:
Q  16 tagggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcctt 74  Q
    ||||||| |||||||||||||| | |||| |||||||  ||||| ||||||||||||||    
T  40139585 tagggggccaaaatcgcaacttttagaaagataggggcccaaaagtgcaattaagcctt 40139527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 20 - 62
Target Start/End: Complemental strand, 47909647 - 47909605
Alignment:
Q  20 gggtcaaaatcgcaacttcttgaaacatagggggtcaaaactg 62  Q
    ||||||||||||||||| |||||||| |||||||| |||||||    
T  47909647 gggtcaaaatcgcaactccttgaaacttagggggttaaaactg 47909605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 73
Target Start/End: Complemental strand, 1450039 - 1449982
Alignment:
Q  16 tagggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcct 73  Q
    ||||||| |||||| ||||||| |||||| ||||| || ||||| |||||||||||||    
T  1450039 tagggggccaaaattgcaactttttgaaagataggtggccaaaagtgcaattaagcct 1449982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 17 - 74
Target Start/End: Complemental strand, 5490559 - 5490502
Alignment:
Q  17 agggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcctt 74  Q
    |||||| |||||||||||||| |||||||||| ||||| |||| |||  |||||||||    
T  5490559 agggggccaaaatcgcaactttttgaaacataaggggtgaaaagtgcttttaagcctt 5490502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 159 - 248
Target Start/End: Original strand, 6707891 - 6707980
Alignment:
Q  159 aattaagaaattatttattgaaaaagtctaatatttcaatttccgatccattgaatgcataaatttcaataaaaacttactatctaaagt 248  Q
    |||||||||||| || |||| ||||   ||||||||||||||  ||| || |||||| ||||||||| |||||| |||| ||| ||||||    
T  6707891 aattaagaaattgttcattggaaaaacttaatatttcaatttttgatacactgaatgtataaatttctataaaatcttattatgtaaagt 6707980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 25 - 74
Target Start/End: Complemental strand, 9477180 - 9477131
Alignment:
Q  25 aaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcctt 74  Q
    ||||||||||||| || |||||||||||| ||||||||| ||||| ||||    
T  9477180 aaaatcgcaactttttaaaacatagggggccaaaactgctattaaacctt 9477131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 24 - 69
Target Start/End: Original strand, 9500168 - 9500213
Alignment:
Q  24 caaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaa 69  Q
    |||||||||||||||||||||| |||||||  |||||||| |||||    
T  9500168 caaaatcgcaacttcttgaaacttagggggctaaaactgctattaa 9500213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 147 - 248
Target Start/End: Complemental strand, 17883418 - 17883317
Alignment:
Q  147 ttaaggattctaaattaagaaattatttattgaaaaagtctaatatttcaatttccgatccattgaatgcataaatttcaataaaaacttactatctaaa 246  Q
    ||||||||| | ||| |||||||||||| || |||||||| || | || ||||||| |  |||||| | |||||||||  | ||||||||||||| ||||    
T  17883418 ttaaggatttttaataaagaaattattttttaaaaaagtcaaaaactttaatttccaacgcattgatttcataaattttgacaaaaacttactatttaaa 17883319  T
Q  247 gt 248  Q
    ||    
T  17883318 gt 17883317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 147 - 224
Target Start/End: Complemental strand, 22739540 - 22739463
Alignment:
Q  147 ttaaggattctaaattaagaaattatttattgaaaaagtctaatatttcaatttccgatccattgaatgcataaattt 224  Q
    ||||||||| | ||||||||||||||||||| ||||  ||| |||  ||||||| |||| ||||||||| | ||||||    
T  22739540 ttaaggattttcaattaagaaattatttattaaaaatatctgatacatcaattttcgatgcattgaatgtacaaattt 22739463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 24 - 73
Target Start/End: Complemental strand, 24432384 - 24432335
Alignment:
Q  24 caaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcct 73  Q
    ||||||||||||||||||| || ||| ||||||||| ||| |||||||||    
T  24432384 caaaatcgcaacttcttgatacttagtgggtcaaaattgctattaagcct 24432335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 147 - 248
Target Start/End: Complemental strand, 26402887 - 26402786
Alignment:
Q  147 ttaaggattctaaattaagaaattatttattgaaaaagtctaatatttcaatttccgatccattgaatgcataaatttcaataaaaacttactatctaaa 246  Q
    ||||||||||  ||| |||||||||||  || |||||||| || | |||||||| | || |||||| | |||||||||  | ||||||||||||| ||||    
T  26402887 ttaaggattcctaataaagaaattattccttaaaaaagtcaaaaacttcaattttcaatacattgatttcataaattttgacaaaaacttactatttaaa 26402788  T
Q  247 gt 248  Q
    ||    
T  26402787 gt 26402786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 24 - 72
Target Start/End: Original strand, 30505147 - 30505196
Alignment:
Q  24 caaaatcgcaacttcttgaaacatagggg-gtcaaaactgcaattaagcc 72  Q
    ||||||||||||||||||||||||||||| |  |||| ||||||||||||    
T  30505147 caaaatcgcaacttcttgaaacataggggagcaaaaaatgcaattaagcc 30505196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 147 - 244
Target Start/End: Original strand, 41898255 - 41898352
Alignment:
Q  147 ttaaggattctaaattaagaaattatttattgaaaaagtctaatatttcaatttccgatccattgaatgcataaatttcaataaaaacttactatcta 244  Q
    ||||||||| | |||||||||| | || |||||||||||  |||| ||||||||||||| |||| |||| | || |||| |||| || ||| ||||||    
T  41898255 ttaaggattttcaattaagaaacttttcattgaaaaagttcaataattcaatttccgatgcattaaatgtacaagtttccataacaatttattatcta 41898352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 24 - 73
Target Start/End: Complemental strand, 46199101 - 46199052
Alignment:
Q  24 caaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcct 73  Q
    ||||||||||||||||| ||| |||| ||| ||||||||| |||||||||    
T  46199101 caaaatcgcaacttcttaaaatatagaggggcaaaactgctattaagcct 46199052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 159 - 206
Target Start/End: Original strand, 2699270 - 2699317
Alignment:
Q  159 aattaagaaattatttattgaaaaa-gtctaatatttcaatttccgatc 206  Q
    |||||||||||||||| |||||||| || ||||||||||||||||||||    
T  2699270 aattaagaaattattt-ttgaaaaatgtttaatatttcaatttccgatc 2699317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 147 - 231
Target Start/End: Complemental strand, 5496075 - 5495991
Alignment:
Q  147 ttaaggattctaaattaagaaattatttattgaaaaagtctaatatttcaatttccgatccattgaatgcataaatttcaataaa 231  Q
    |||||| |||| |||||||||||||||  ||||||| || ||| | || ||||| |||| ||||||||||| || |||| |||||    
T  5496075 ttaaggtttctcaattaagaaattattccttgaaaatgtttaacactttaattttcgatgcattgaatgcacaactttccataaa 5495991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 147 - 246
Target Start/End: Original strand, 6775232 - 6775331
Alignment:
Q  147 ttaaggattctaaattaagaaattatttattgaaaaagtctaa-tatttcaatttccgatccattgaatgcataaatttcaataaaaacttactatctaa 245  Q
    |||||| |||| |||||| ||||||||  |||||||| ||| | ||||| |||||||||| ||||||||||| || |||| ||||| | ||||||| |||    
T  6775232 ttaaggtttctcaattaataaattattctttgaaaaa-tctcactatttgaatttccgatgcattgaatgcacaattttccataaatatttactatttaa 6775330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 16 - 72
Target Start/End: Original strand, 10385706 - 10385762
Alignment:
Q  16 tagggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcc 72  Q
    |||||||||| ||||||||||| | |||| |||||||  ||||| ||||||||||||    
T  10385706 tagggggtcataatcgcaacttttggaaagataggggtccaaaagtgcaattaagcc 10385762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 16 - 72
Target Start/End: Original strand, 11742915 - 11742971
Alignment:
Q  16 tagggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcc 72  Q
    |||||| ||||||||||||||| |  ||| |||||||| ||||| ||||||||||||    
T  11742915 taggggatcaaaatcgcaacttttgaaaagatagggggccaaaagtgcaattaagcc 11742971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 16 - 72
Target Start/End: Original strand, 20505267 - 20505323
Alignment:
Q  16 tagggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcc 72  Q
    ||||||| ||||||||||||||| | |||  |||||||| |||||||| ||||||||    
T  20505267 tagggggccaaaatcgcaacttcataaaagctagggggtgaaaactgctattaagcc 20505323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 163 - 211
Target Start/End: Original strand, 38452188 - 38452236
Alignment:
Q  163 aagaaattatttattgaaaaagtctaatatttcaatttccgatccattg 211  Q
    ||||||||||||  | |||||||| |||||||||||||||||| |||||    
T  38452188 aagaaattattttataaaaaagtcaaatatttcaatttccgatgcattg 38452236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 50; Significance: 2e-19; HSPs: 62)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 159 - 260
Target Start/End: Complemental strand, 32770863 - 32770762
Alignment:
Q  159 aattaagaaattatttattgaaaaagtctaatatttcaatttccgatccattgaatgcataaatttcaataaaaacttactatctaaagtccgtaaagaa 258  Q
    |||||||||||||||||||||||||   ||||| |||||||||  || ||||||  ||||||||||| ||||||  |||||||||||||||| |||||||    
T  32770863 aattaagaaattatttattgaaaaaacttaatacttcaatttcgaatgcattgaccgcataaatttccataaaattttactatctaaagtccttaaagaa 32770764  T
Q  259 tg 260  Q
    ||    
T  32770763 tg 32770762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 147 - 246
Target Start/End: Original strand, 27921891 - 27921991
Alignment:
Q  147 ttaaggattctaaattaagaaattatttattgaaaaag-tctaatatttcaatttccgatccattgaatgcataaatttcaataaaaacttactatctaa 245  Q
    ||||| ||||||||||||||||||||||||| |||||  ||||||||||||||||   || ||||||||| |||||||||  |||||||||| |||||||    
T  27921891 ttaagtattctaaattaagaaattatttattaaaaaacctctaatatttcaattttaaatgcattgaatgtataaatttccttaaaaacttattatctaa 27921990  T
Q  246 a 246  Q
    |    
T  27921991 a 27921991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 14816055 - 14816112
Alignment:
Q  16 tagggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcct 73  Q
    ||||||| |||||||||||||||||||||||||||||| ||||||||| |||||||||    
T  14816055 tagggggccaaaatcgcaacttcttgaaacatagggggccaaaactgctattaagcct 14816112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 148 - 267
Target Start/End: Original strand, 18734354 - 18734473
Alignment:
Q  148 taaggattctaaattaagaaattatttattgaaaaagtctaatatttcaatttccgatccattgaatgcataaatttcaataaaaacttactatctaaag 247  Q
    ||||| |||| |||||||||||||||  || ||||||| ||| | ||||||||||||| ||||||||||| || |||  ||||||| ||||||| | |||    
T  18734354 taaggtttctcaattaagaaattattccttaaaaaagtttaacacttcaatttccgatacattgaatgcacaatttttcataaaaatttactatttcaag 18734453  T
Q  248 tccgtaaagaatgaccttag 267  Q
    ||| || |||||| ||||||    
T  18734454 tccttagagaatgtccttag 18734473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 72
Target Start/End: Complemental strand, 4856762 - 4856709
Alignment:
Q  19 ggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcc 72  Q
    |||||||||||||||||||||||||||||| |||| ||||||||| ||||||||    
T  4856762 ggggtcaaaatcgcaacttcttgaaacataaggggccaaaactgctattaagcc 4856709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 20 - 73
Target Start/End: Complemental strand, 8740206 - 8740153
Alignment:
Q  20 gggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcct 73  Q
    ||||||||||||||||||||| ||| ||||||||| ||||||||||||||||||    
T  8740206 gggtcaaaatcgcaacttcttaaaatatagggggttaaaactgcaattaagcct 8740153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 159 - 260
Target Start/End: Complemental strand, 32438175 - 32438074
Alignment:
Q  159 aattaagaaattatttattgaaaaagtctaatatttcaatttccgatccattgaatgcataaatttcaataaaaacttactatctaaagtccgtaaagaa 258  Q
    |||||| ||||||||  ||||||| || ||| | ||||||||||||| |||| |||||| || |||| ||||||| ||||||| |||||||| |||||||    
T  32438175 aattaaaaaattattatttgaaaaggtttaacacttcaatttccgatgcattaaatgcacaattttccataaaaatttactatttaaagtccttaaagaa 32438076  T
Q  259 tg 260  Q
    ||    
T  32438075 tg 32438074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 24 - 72
Target Start/End: Complemental strand, 11363930 - 11363882
Alignment:
Q  24 caaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcc 72  Q
    |||||||||||||||||||||||||||||| ||||| ||||||||||||    
T  11363930 caaaatcgcaacttcttgaaacatagggggccaaaaatgcaattaagcc 11363882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 16 - 75
Target Start/End: Complemental strand, 28719373 - 28719314
Alignment:
Q  16 tagggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcctta 75  Q
    ||||||| ||||||||||||||||| |||||||||||| |||||  ||||||||||||||    
T  28719373 tagggggccaaaatcgcaacttcttaaaacatagggggccaaaagggcaattaagcctta 28719314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 19 - 69
Target Start/End: Original strand, 8740449 - 8740498
Alignment:
Q  19 ggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaa 69  Q
    |||||||||||||||||||||||||||||| |||| |||||||||||||||    
T  8740449 ggggtcaaaatcgcaacttcttgaaacata-ggggccaaaactgcaattaa 8740498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 151 - 249
Target Start/End: Complemental strand, 11580522 - 11580424
Alignment:
Q  151 ggattctaaattaagaaattatttattgaaaaagtctaatatttcaatttccgatccattgaatgcataaatttcaataaaaacttactatctaaagtc 249  Q
    ||||||| |||||| |||||||| ||| || |||||||||| ||||||||  |||  ||||||| || |  |||| |||||||||||||||||||||||    
T  11580522 ggattctcaattaaaaaattattcattaaataagtctaatacttcaatttttgatggattgaatacacatgtttccataaaaacttactatctaaagtc 11580424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 24 - 74
Target Start/End: Original strand, 12802470 - 12802520
Alignment:
Q  24 caaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcctt 74  Q
    |||||||||||||||||||||||||||| | ||||||||| ||||||||||    
T  12802470 caaaatcgcaacttcttgaaacatagggagccaaaactgctattaagcctt 12802520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 52297 - 52354
Alignment:
Q  16 tagggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcct 73  Q
    ||||||| ||||||||||| ||||| |||||||||||| ||||| |||||||||||||    
T  52297 tagggggccaaaatcgcaaattcttaaaacatagggggccaaaagtgcaattaagcct 52354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 21631874 - 21631821
Alignment:
Q  16 tagggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaa 69  Q
    ||||||| ||||||||||||||| |||||||||||||| ||||| |||||||||    
T  21631874 tagggggccaaaatcgcaacttcatgaaacatagggggccaaaagtgcaattaa 21631821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 24 - 72
Target Start/End: Complemental strand, 14815746 - 14815698
Alignment:
Q  24 caaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcc 72  Q
    ||||| |||||||||||||||||||||||| ||||||||| ||||||||    
T  14815746 caaaaccgcaacttcttgaaacatagggggccaaaactgctattaagcc 14815698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 16 - 72
Target Start/End: Original strand, 15023096 - 15023152
Alignment:
Q  16 tagggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcc 72  Q
    ||||||||||||||| |||||||||||||  ||||||| ||||||||| ||||||||    
T  15023096 tagggggtcaaaatcacaacttcttgaaagttagggggccaaaactgctattaagcc 15023152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 148 - 260
Target Start/End: Original strand, 36260429 - 36260541
Alignment:
Q  148 taaggattctaaattaagaaattatttattgaaaaagtctaatatttcaatttccgatccattgaatgcataaatttcaataaaaacttactatctaaag 247  Q
    |||||||||  | ||||||| ||||| ||||||||||||||||  ||||||||| ||| |||| ||| || ||||||  ||| ||| |||||||| ||||    
T  36260429 taaggattcccatttaagaagttattaattgaaaaagtctaatgcttcaatttctgatgcattaaatacacaaatttttatataaatttactatccaaag 36260528  T
Q  248 tccgtaaagaatg 260  Q
    |||  ||||||||    
T  36260529 tcctcaaagaatg 36260541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 23 - 74
Target Start/End: Original strand, 9780950 - 9781001
Alignment:
Q  23 tcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcctt 74  Q
    ||||||||||||||| || ||||||| |||| ||||||||||||||||||||    
T  9780950 tcaaaatcgcaactttttaaaacataaggggccaaaactgcaattaagcctt 9781001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 24 - 75
Target Start/End: Original strand, 14983966 - 14984017
Alignment:
Q  24 caaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcctta 75  Q
    ||||||||||||||||| ||||||| |||| ||||| |||||||||||||||    
T  14983966 caaaatcgcaacttcttaaaacatacggggccaaaagtgcaattaagcctta 14984017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 158 - 201
Target Start/End: Original strand, 25093866 - 25093909
Alignment:
Q  158 aaattaagaaattatttattgaaaaagtctaatatttcaatttc 201  Q
    |||||||||||||||||||| |||||||| ||||||||||||||    
T  25093866 aaattaagaaattatttattaaaaaagtcaaatatttcaatttc 25093909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 20 - 75
Target Start/End: Complemental strand, 35500092 - 35500037
Alignment:
Q  20 gggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcctta 75  Q
    ||||| ||||| |||||| ||||||||||||||| ||||||||| |||||||||||    
T  35500092 gggtcgaaatcacaactttttgaaacatagggggccaaaactgctattaagcctta 35500037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 69
Target Start/End: Original strand, 4423780 - 4423830
Alignment:
Q  19 ggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaa 69  Q
    ||||||||||||||||||| || |||||||||| || ||||||||||||||    
T  4423780 ggggtcaaaatcgcaactttttaaaacatagggagttaaaactgcaattaa 4423830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 16 - 74
Target Start/End: Original strand, 36286411 - 36286469
Alignment:
Q  16 tagggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcctt 74  Q
    ||||||| |||||||||||||| | |||| |||||||| ||||| ||||||||||||||    
T  36286411 tagggggccaaaatcgcaacttttggaaagatagggggccaaaagtgcaattaagcctt 36286469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 16 - 74
Target Start/End: Original strand, 39374387 - 39374445
Alignment:
Q  16 tagggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcctt 74  Q
    |||||||||||||| ||||||| |  ||| |||||||||||||| ||||||||||||||    
T  39374387 tagggggtcaaaattgcaacttttgaaaatatagggggtcaaaagtgcaattaagcctt 39374445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 23280888 - 23280945
Alignment:
Q  16 tagggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcct 73  Q
    ||||||| |||||||||||||| | |||| |||||||| ||||| |||||||||||||    
T  23280888 tagggggccaaaatcgcaacttttagaaagatagggggacaaaagtgcaattaagcct 23280945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 147 - 248
Target Start/End: Complemental strand, 29260432 - 29260331
Alignment:
Q  147 ttaaggattctaaattaagaaattatttattgaaaaagtctaatatttcaatttccgatccattgaatgcataaatttcaataaaaacttactatctaaa 246  Q
    ||||||||||| |||||||||| || ||||| |||||   ||||  |||||||| |||| |||| |||||  ||| ||  ||||||||||||||||||||    
T  29260432 ttaaggattcttaattaagaaaataattatttaaaaaacttaatccttcaattttcgatgcattaaatgctcaaactttcataaaaacttactatctaaa 29260333  T
Q  247 gt 248  Q
    ||    
T  29260332 gt 29260331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 17 - 74
Target Start/End: Original strand, 29825018 - 29825074
Alignment:
Q  17 agggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcctt 74  Q
    ||||||||||||||||||||| |||||||||| ||||| |||| |||| |||||||||    
T  29825018 agggggtcaaaatcgcaactttttgaaacata-ggggtaaaaagtgcatttaagcctt 29825074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 35500349 - 35500406
Alignment:
Q  16 tagggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcct 73  Q
    ||||||| ||||||||||||||||||||||||||||   ||||||| | |||||||||    
T  35500349 tagggggccaaaatcgcaacttcttgaaacatagggccccaaaactactattaagcct 35500406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 24 - 73
Target Start/End: Original strand, 39672687 - 39672735
Alignment:
Q  24 caaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcct 73  Q
    ||||||| ||||||||||||||||| |||| |||||||||||||||||||    
T  39672687 caaaatcacaacttcttgaaacata-ggggccaaaactgcaattaagcct 39672735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 24 - 69
Target Start/End: Original strand, 44078555 - 44078600
Alignment:
Q  24 caaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaa 69  Q
    ||||||||||||||||| |||||||||||| ||||| |||||||||    
T  44078555 caaaatcgcaacttcttaaaacatagggggccaaaagtgcaattaa 44078600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 16 - 72
Target Start/End: Complemental strand, 10857395 - 10857339
Alignment:
Q  16 tagggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcc 72  Q
    ||||||| |||||||||||||| | |||| |||||||| ||||| ||||||||||||    
T  10857395 tagggggccaaaatcgcaacttttggaaagatagggggccaaaagtgcaattaagcc 10857339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 24 - 68
Target Start/End: Original strand, 23049830 - 23049874
Alignment:
Q  24 caaaatcgcaacttcttgaaacatagggggtcaaaactgcaatta 68  Q
    |||||||||||||||||||||||||| ||| ||||| ||||||||    
T  23049830 caaaatcgcaacttcttgaaacatagagggccaaaagtgcaatta 23049874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 17 - 61
Target Start/End: Complemental strand, 29370771 - 29370727
Alignment:
Q  17 agggggtcaaaatcgcaacttcttgaaacatagggggtcaaaact 61  Q
    ||||| |||||||||||||||||| |||||||||||| |||||||    
T  29370771 aggggatcaaaatcgcaacttcttaaaacatagggggccaaaact 29370727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 147 - 199
Target Start/End: Complemental strand, 29865877 - 29865825
Alignment:
Q  147 ttaaggattctaaattaagaaattatttattgaaaaagtctaatatttcaatt 199  Q
    |||||||||||||| ||||||||||||  || |||||||| ||||||||||||    
T  29865877 ttaaggattctaaaataagaaattattcttttaaaaagtcgaatatttcaatt 29865825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 16 - 72
Target Start/End: Original strand, 32661692 - 32661748
Alignment:
Q  16 tagggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcc 72  Q
    ||||||| |||||||||||||| | |||| |||||||| ||||| ||||||||||||    
T  32661692 tagggggccaaaatcgcaacttttggaaagatagggggccaaaagtgcaattaagcc 32661748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 75
Target Start/End: Original strand, 2755207 - 2755266
Alignment:
Q  16 tagggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcctta 75  Q
    ||||||| |||||||||||||| |  ||| |||||||| ||||| |||||||||||||||    
T  2755207 tagggggccaaaatcgcaacttttgaaaagatagggggccaaaagtgcaattaagcctta 2755266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 193 - 248
Target Start/End: Original strand, 7933341 - 7933396
Alignment:
Q  193 ttcaatttccgatccattgaatgcataaatttcaataaaaacttactatctaaagt 248  Q
    ||||||||||||| |||||||||||||| |||  ||||||| ||||||| ||||||    
T  7933341 ttcaatttccgatgcattgaatgcataatttttcataaaaatttactatttaaagt 7933396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 159 - 218
Target Start/End: Complemental strand, 11252781 - 11252722
Alignment:
Q  159 aattaagaaattatttattgaaaaagtctaatatttcaatttccgatccattgaatgcat 218  Q
    |||||||||| | || |||||||||||||| || |||||||| |||| ||||||||||||    
T  11252781 aattaagaaacttttaattgaaaaagtctactacttcaattttcgatacattgaatgcat 11252722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 24 - 71
Target Start/End: Original strand, 17850500 - 17850547
Alignment:
Q  24 caaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagc 71  Q
    ||||||||||||||||| |||||||||||| ||||||| | |||||||    
T  17850500 caaaatcgcaacttcttaaaacatagggggccaaaactactattaagc 17850547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 24 - 75
Target Start/End: Complemental strand, 43890148 - 43890097
Alignment:
Q  24 caaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcctta 75  Q
    ||||||||||||||||| |||||||||||  ||||| ||||||||| |||||    
T  43890148 caaaatcgcaacttcttcaaacataggggaccaaaagtgcaattaaacctta 43890097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 24 - 74
Target Start/End: Complemental strand, 4423469 - 4423420
Alignment:
Q  24 caaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcctt 74  Q
    ||||||||||||||||| |||||||  ||| ||||||||||||||||||||    
T  4423469 caaaatcgcaacttcttaaaacata-agggccaaaactgcaattaagcctt 4423420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 24 - 74
Target Start/End: Complemental strand, 8030174 - 8030124
Alignment:
Q  24 caaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcctt 74  Q
    |||||| |||||||||  |||||||||||| ||||||||| ||||||||||    
T  8030174 caaaattgcaacttctgtaaacatagggggccaaaactgctattaagcctt 8030124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 147 - 237
Target Start/End: Original strand, 8964393 - 8964483
Alignment:
Q  147 ttaaggattctaaattaagaaattatttattgaaaaagtctaatatttcaatttccgatccattgaatgcataaatttcaataaaaactta 237  Q
    ||||| ||||||||||||| |||||||  || |||||||  ||||||||||||||| || |||||| | || ||||||  ||||| |||||    
T  8964393 ttaagcattctaaattaagtaattattctttaaaaaagtaaaatatttcaatttccaatgcattgattacacaaattttcataaatactta 8964483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 147 - 241
Target Start/End: Complemental strand, 9153579 - 9153486
Alignment:
Q  147 ttaaggattctaaattaagaaattatttattgaaaaagtctaatatttcaatttccgatccattgaatgcataaatttcaataaaaacttactat 241  Q
    |||||||||| ||||||||||||||||  || |||||| | || | |||||||||| || |||||||| || ||||||  || ||||||||||||    
T  9153579 ttaaggattccaaattaagaaattattctttaaaaaaggcaaacacttcaatttccaatgcattgaatacacaaatttttat-aaaacttactat 9153486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 15 - 73
Target Start/End: Original strand, 11176154 - 11176212
Alignment:
Q  15 atagggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcct 73  Q
    ||||||||||||||||||||| | |||||||||||| || ||||| |||| || |||||    
T  11176154 atagggggtcaaaatcgcaacattttgaaacataggaggccaaaagtgcactttagcct 11176212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 16 - 70
Target Start/End: Complemental strand, 11188362 - 11188308
Alignment:
Q  16 tagggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaag 70  Q
    ||||||| |||||||||||||| |  ||| |||||||||||||| ||||||||||    
T  11188362 tagggggccaaaatcgcaacttttgaaaagatagggggtcaaaagtgcaattaag 11188308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 31 - 73
Target Start/End: Original strand, 21633340 - 21633382
Alignment:
Q  31 gcaacttcttgaaacatagggggtcaaaactgcaattaagcct 73  Q
    |||||||||| |||||||||||| ||||| |||||||||||||    
T  21633340 gcaacttcttaaaacatagggggccaaaagtgcaattaagcct 21633382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 16 - 74
Target Start/End: Complemental strand, 32661460 - 32661402
Alignment:
Q  16 tagggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcctt 74  Q
    ||||||| |||||||||||||| |  ||| |||||||| ||||| ||||||||||||||    
T  32661460 tagggggacaaaatcgcaacttttgaaaagatagggggccaaaagtgcaattaagcctt 32661402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 171 - 241
Target Start/End: Original strand, 33617966 - 33618036
Alignment:
Q  171 atttattgaaaaagtctaatatttcaatttccgatccattgaatgcataaatttcaataaaaacttactat 241  Q
    ||||||| |||||||  ||||||| ||||||| || ||||||||||| | ||||| |||||| ||||||||    
T  33617966 atttatttaaaaagttaaatattttaatttccaatgcattgaatgcacatatttctataaaatcttactat 33618036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 159 - 257
Target Start/End: Complemental strand, 33963036 - 33962938
Alignment:
Q  159 aattaagaaattatttattgaaaaagtctaatatttcaatttccgatccattgaatgcataaatttcaataaaaacttactatctaaagtccgtaaaga 257  Q
    |||||||||||||||  || ||||||| ||| | |||||||| | || ||||||||||| || |||  ||||||| ||| ||| |||||||| ||||||    
T  33963036 aattaagaaattattctttaaaaaagtttaacacttcaattttcaatgcattgaatgcacaatttttcataaaaatttattatttaaagtccttaaaga 33962938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 16 - 74
Target Start/End: Original strand, 43741759 - 43741816
Alignment:
Q  16 tagggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcctt 74  Q
    |||||| |||||||||||||||||||||||||| | |  ||||| ||||||||||||||    
T  43741759 taggggatcaaaatcgcaacttcttgaaacata-gcgaccaaaagtgcaattaagcctt 43741816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 24 - 74
Target Start/End: Original strand, 44618003 - 44618053
Alignment:
Q  24 caaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcctt 74  Q
    |||||||||||||||||||||  ||| |||| |||||||| ||||||||||    
T  44618003 caaaatcgcaacttcttgaaagttagagggttaaaactgctattaagcctt 44618053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 10741335 - 10741392
Alignment:
Q  16 tagggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcct 73  Q
    ||||||||||||| |||||||| |  ||| |||||||| ||||| |||||||||||||    
T  10741335 tagggggtcaaaaccgcaacttttgaaaagatagggggccaaaagtgcaattaagcct 10741392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 73
Target Start/End: Complemental strand, 20650426 - 20650369
Alignment:
Q  16 tagggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcct 73  Q
    ||||||| ||||||| |||||||||||||| |||||||  |||||||| || ||||||    
T  20650426 tagggggccaaaatctcaacttcttgaaacttagggggctaaaactgctatgaagcct 20650369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 24 - 73
Target Start/End: Original strand, 21024726 - 21024775
Alignment:
Q  24 caaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcct 73  Q
    |||||||||||||| |  ||| |||||||||||||| |||||||||||||    
T  21024726 caaaatcgcaacttttgaaaagatagggggtcaaaagtgcaattaagcct 21024775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 73
Target Start/End: Complemental strand, 23048346 - 23048289
Alignment:
Q  16 tagggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcct 73  Q
    ||||||| ||||||||||||||||| ||| ||| |||| ||||| ||||||| |||||    
T  23048346 tagggggccaaaatcgcaacttcttaaaatataaggggccaaaaatgcaatttagcct 23048289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 73
Target Start/End: Complemental strand, 23685878 - 23685822
Alignment:
Q  16 tagggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcct 73  Q
    |||||||  |||||||||||||||||||||||| |||| ||||| | |||||||||||    
T  23685878 tagggggaaaaaatcgcaacttcttgaaacata-ggggccaaaagtccaattaagcct 23685822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 15 - 64
Target Start/End: Original strand, 28851673 - 28851722
Alignment:
Q  15 atagggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgca 64  Q
    ||||||||||||||||||||| |  |||||  ||||||||||||||||||    
T  28851673 atagggggtcaaaatcgcaacattgtgaaagttagggggtcaaaactgca 28851722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 24 - 73
Target Start/End: Complemental strand, 34600595 - 34600546
Alignment:
Q  24 caaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcct 73  Q
    |||||||||||||| | |||| |||||||| ||||| |||||||||||||    
T  34600595 caaaatcgcaacttttggaaagatagggggccaaaagtgcaattaagcct 34600546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 16 - 52
Target Start/End: Complemental strand, 16143723 - 16143687
Alignment:
Q  16 tagggggtcaaaatcgcaacttcttgaaacatagggg 52  Q
    ||||||| ||||||||||||||||||||| |||||||    
T  16143723 tagggggccaaaatcgcaacttcttgaaatatagggg 16143687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 28451692 - 28451640
Alignment:
Q  19 ggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagc 71  Q
    |||| |||||||||||||| | |||| |||||||| ||||| |||||||||||    
T  28451692 ggggccaaaatcgcaacttttagaaagatagggggccaaaagtgcaattaagc 28451640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 17 - 69
Target Start/End: Original strand, 42274782 - 42274833
Alignment:
Q  17 agggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaa 69  Q
    |||||| |||||||||||||||| |||| ||| |||||||||| |||||||||    
T  42274782 agggggccaaaatcgcaacttctagaaagata-ggggtcaaaagtgcaattaa 42274833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 47; Significance: 1e-17; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 16 - 74
Target Start/End: Complemental strand, 12203948 - 12203890
Alignment:
Q  16 tagggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcctt 74  Q
    |||||||||||||||||||||||||||||||||||||| ||||| ||||||||| ||||    
T  12203948 tagggggtcaaaatcgcaacttcttgaaacatagggggccaaaagtgcaattaaacctt 12203890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 147 - 247
Target Start/End: Complemental strand, 5678576 - 5678476
Alignment:
Q  147 ttaaggattctaaattaagaaattatttattgaaaaagtctaatatttcaatttccgatccattgaatgcataaatttcaataaaaacttactatctaaa 246  Q
    ||||||||||  | ||||||||||||| ||| ||||||| ||||| |||||||| | || ||||||||  ||||||||| ||||||| ||||||||||||    
T  5678576 ttaaggattcatagttaagaaattattcattaaaaaagtttaatacttcaattttcaatacattgaatatataaatttctataaaaatttactatctaaa 5678477  T
Q  247 g 247  Q
    |    
T  5678476 g 5678476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 16 - 72
Target Start/End: Original strand, 11624306 - 11624362
Alignment:
Q  16 tagggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcc 72  Q
    |||||| ||||||| ||||||||||||||||||||||||||||| ||||||||||||    
T  11624306 taggggttcaaaattgcaacttcttgaaacatagggggtcaaaattgcaattaagcc 11624362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 16 - 72
Target Start/End: Original strand, 28574564 - 28574620
Alignment:
Q  16 tagggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcc 72  Q
    ||||||| |||||||||||||||||||||||||||||| ||||| ||||||||||||    
T  28574564 tagggggccaaaatcgcaacttcttgaaacatagggggccaaaagtgcaattaagcc 28574620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 17 - 74
Target Start/End: Original strand, 2173878 - 2173935
Alignment:
Q  17 agggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcctt 74  Q
    |||| ||||||||||| |||||||||||||||||||| ||||| ||||||||||||||    
T  2173878 agggagtcaaaatcgctacttcttgaaacatagggggccaaaagtgcaattaagcctt 2173935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 16 - 72
Target Start/End: Complemental strand, 11623215 - 11623159
Alignment:
Q  16 tagggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcc 72  Q
    ||||||| |||||||||||||||||||||||||| ||| ||||| ||||||||||||    
T  11623215 tagggggccaaaatcgcaacttcttgaaacatagagggccaaaagtgcaattaagcc 11623159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 16 - 72
Target Start/End: Original strand, 22517491 - 22517547
Alignment:
Q  16 tagggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcc 72  Q
    |||||||||||||||| ||||||||||||||||||||  ||||| ||||||||||||    
T  22517491 tagggggtcaaaatcgtaacttcttgaaacataggggaccaaaagtgcaattaagcc 22517547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 147 - 266
Target Start/End: Complemental strand, 10571047 - 10570928
Alignment:
Q  147 ttaaggattctaaattaagaaattatttattgaaaaagtctaatatttcaatttccgatccattgaatgcataaatttcaataaaaacttactatctaaa 246  Q
    ||||||||||| |||||||||| |||| |||||||| ||  |||| ||||||||  ||| ||||||||| | ||||||| ||||||| ||||||  ||||    
T  10571047 ttaaggattcttaattaagaaactattcattgaaaatgttcaatacttcaatttttgatgcattgaatgaacaaatttctataaaaatttactaaataaa 10570948  T
Q  247 gtccgtaaagaatgacctta 266  Q
    |||  |||||| || |||||    
T  10570947 gtctttaaagagtgtcctta 10570928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 16 - 70
Target Start/End: Original strand, 2018575 - 2018629
Alignment:
Q  16 tagggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaag 70  Q
    ||||||| ||||||||||||||||||||||||| |||| ||||| ||||||||||    
T  2018575 tagggggccaaaatcgcaacttcttgaaacataaggggccaaaagtgcaattaag 2018629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 20 - 74
Target Start/End: Original strand, 9070131 - 9070185
Alignment:
Q  20 gggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcctt 74  Q
    |||| ||||||||||||||||||||||||||||| ||||| ||| ||||||||||    
T  9070131 gggttaaaatcgcaacttcttgaaacatagggggccaaaaatgctattaagcctt 9070185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 25 - 75
Target Start/End: Complemental strand, 12798774 - 12798724
Alignment:
Q  25 aaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcctta 75  Q
    |||||||||||||||||||| |||||||| ||||||||| |||||||||||    
T  12798774 aaaatcgcaacttcttgaaatatagggggccaaaactgctattaagcctta 12798724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 16 - 52
Target Start/End: Complemental strand, 2078222 - 2078186
Alignment:
Q  16 tagggggtcaaaatcgcaacttcttgaaacatagggg 52  Q
    |||||||||||||||||||||||||||||||||||||    
T  2078222 tagggggtcaaaatcgcaacttcttgaaacatagggg 2078186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 16 - 75
Target Start/End: Original strand, 12766472 - 12766531
Alignment:
Q  16 tagggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcctta 75  Q
    ||||||| ||||||||||||||| |||||  |||||||| |||||||| |||||||||||    
T  12766472 tagggggccaaaatcgcaacttcgtgaaagttagggggtgaaaactgctattaagcctta 12766531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 20 - 74
Target Start/End: Complemental strand, 4792348 - 4792294
Alignment:
Q  20 gggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcctt 74  Q
    |||||||||| |||||||||| |||||||| ||| ||||| ||||||||||||||    
T  4792348 gggtcaaaattgcaacttcttaaaacatagagggccaaaaatgcaattaagcctt 4792294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 147 - 241
Target Start/End: Complemental strand, 6586522 - 6586428
Alignment:
Q  147 ttaaggattctaaattaagaaattatttattgaaaaagtctaatatttcaatttccgatccattgaatgcataaatttcaataaaaacttactat 241  Q
    ||||| || |||||||| ||||||| |  |||||||||||  ||| ||||||||||||| |||||||  |||||||||  ||||||| |||||||    
T  6586522 ttaagcatactaaattaggaaattaatctttgaaaaagtcagatagttcaatttccgatgcattgaaaacataaattttcataaaaagttactat 6586428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 24 - 74
Target Start/End: Complemental strand, 22516021 - 22515971
Alignment:
Q  24 caaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcctt 74  Q
    |||||||||||||||||||||||||||||  ||||| || |||||||||||    
T  22516021 caaaatcgcaacttcttgaaacataggggaccaaaagtgtaattaagcctt 22515971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 19 - 72
Target Start/End: Complemental strand, 30369837 - 30369784
Alignment:
Q  19 ggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcc 72  Q
    |||| ||||||||||||||||| ||||||| |||| ||||||||| ||||||||    
T  30369837 ggggacaaaatcgcaacttcttaaaacataaggggccaaaactgctattaagcc 30369784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 180 - 244
Target Start/End: Original strand, 1252754 - 1252818
Alignment:
Q  180 aaaagtctaatatttcaatttccgatccattgaatgcataaatttcaataaaaacttactatcta 244  Q
    |||||||||||| ||||||||  ||| |||||||||||| |||||  ||||||||||| ||||||    
T  1252754 aaaagtctaatacttcaatttatgatgcattgaatgcattaattttgataaaaacttaatatcta 1252818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 75
Target Start/End: Complemental strand, 4037094 - 4037035
Alignment:
Q  16 tagggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcctta 75  Q
    ||||||| |||||||||||||| |  ||| |||||||| ||||| |||||||||||||||    
T  4037094 tagggggccaaaatcgcaacttttgaaaagatagggggccaaaagtgcaattaagcctta 4037035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 16 - 74
Target Start/End: Original strand, 1897136 - 1897194
Alignment:
Q  16 tagggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcctt 74  Q
    |||||||||| || |||||||| | |||| ||||||| |||||| ||||||||||||||    
T  1897136 tagggggtcataaccgcaacttttggaaagataggggttcaaaaatgcaattaagcctt 1897194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 24 - 74
Target Start/End: Complemental strand, 2017220 - 2017170
Alignment:
Q  24 caaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcctt 74  Q
    ||||||| |||||||||||||| ||||||  ||||| ||||||||||||||    
T  2017220 caaaatcacaacttcttgaaacttaggggaccaaaaatgcaattaagcctt 2017170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 69
Target Start/End: Original strand, 7504883 - 7504933
Alignment:
Q  19 ggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaa 69  Q
    |||| |||||| |||||||||||||| |||||||| ||||||||| |||||    
T  7504883 ggggccaaaattgcaacttcttgaaatatagggggccaaaactgctattaa 7504933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 16 - 74
Target Start/End: Original strand, 14168975 - 14169033
Alignment:
Q  16 tagggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcctt 74  Q
    ||||||||||||||||||| || |  ||| |||||||| ||||| ||||||||||||||    
T  14168975 tagggggtcaaaatcgcaaattttgaaaagatagggggccaaaagtgcaattaagcctt 14169033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 25 - 72
Target Start/End: Original strand, 29874470 - 29874519
Alignment:
Q  25 aaaatcgcaacttcttgaaacatagggggtc--aaaactgcaattaagcc 72  Q
    ||||||||||||||||||||||||||||| |  |||| ||||||||||||    
T  29874470 aaaatcgcaacttcttgaaacatagggggaccgaaaagtgcaattaagcc 29874519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 73
Target Start/End: Complemental strand, 238986 - 238929
Alignment:
Q  16 tagggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcct 73  Q
    |||| |||||||||||||||||| |||||  |||||||  |||||||| |||||||||    
T  238986 taggaggtcaaaatcgcaacttcgtgaaaattagggggcgaaaactgctattaagcct 238929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 180 - 245
Target Start/End: Original strand, 1243372 - 1243437
Alignment:
Q  180 aaaagtctaatatttcaatttccgatccattgaatgcataaatttcaataaaaacttactatctaa 245  Q
    |||| ||||||| ||||||||  ||| ||||||||||||||||||   |||||||||| |||||||    
T  1243372 aaaaatctaatacttcaatttaagatgcattgaatgcataaattttggtaaaaacttaatatctaa 1243437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 72
Target Start/End: Complemental strand, 2539036 - 2538983
Alignment:
Q  19 ggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcc 72  Q
    ||||||||||||||||||| || |||||||||||  ||||||| | ||||||||    
T  2539036 ggggtcaaaatcgcaactttttaaaacataggggaccaaaactactattaagcc 2538983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 24 - 73
Target Start/End: Original strand, 4793842 - 4793891
Alignment:
Q  24 caaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcct 73  Q
    ||||||||||||| |||||||||||| |||  |||| |||||||||||||    
T  4793842 caaaatcgcaactgcttgaaacatagtgggcaaaaaatgcaattaagcct 4793891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 179 - 224
Target Start/End: Original strand, 7465510 - 7465555
Alignment:
Q  179 aaaaagtctaatatttcaatttccgatccattgaatgcataaattt 224  Q
    |||||||| |||||||||||||||||| |||||| | |||||||||    
T  7465510 aaaaagtcaaatatttcaatttccgatgcattgattacataaattt 7465555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 16 - 52
Target Start/End: Original strand, 10582156 - 10582192
Alignment:
Q  16 tagggggtcaaaatcgcaacttcttgaaacatagggg 52  Q
    ||||||| ||||||||||||||||||||| |||||||    
T  10582156 tagggggccaaaatcgcaacttcttgaaatatagggg 10582192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 17 - 74
Target Start/End: Complemental strand, 20163 - 20106
Alignment:
Q  17 agggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcctt 74  Q
    |||| ||||||||||| |||||||||||||||||||| ||||| ||||||||||||||    
T  20163 agggagtcaaaatcgctacttcttgaaacatagggggccaaaagtgcaattaagcctt 20106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0633 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0633
Description:

Target: scaffold0633; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 159 - 241
Target Start/End: Complemental strand, 5097 - 5015
Alignment:
Q  159 aattaagaaattatttattgaaaaagtctaatatttcaatttccgatccattgaatgcataaatttcaataaaaacttactat 241  Q
    |||||| ||||||||  || ||||||| ||| |||||||||||| || |||||||||||||| |||| ||||||| |||||||    
T  5097 aattaaaaaattattccttaaaaaagtttaacatttcaatttcccatgcattgaatgcataattttccataaaaatttactat 5015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 154 - 260
Target Start/End: Complemental strand, 122563 - 122457
Alignment:
Q  154 ttctaaattaagaaattatttattgaaaaagtctaatatttcaatttccgatccattgaatgcataaatttcaataaaaacttactatctaaagtccgta 253  Q
    |||| |||||||||||||||  |||||||||| ||| | || |||||||||| |||| |||||| || |||| ||||||| ||||||  |||| ||| ||    
T  122563 ttctcaattaagaaattattctttgaaaaagtttaacactttaatttccgatgcattaaatgcacaattttccataaaaaattactacttaaaatcctta 122464  T
Q  254 aagaatg 260  Q
    |||||||    
T  122463 aagaatg 122457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 25 - 73
Target Start/End: Complemental strand, 199713 - 199665
Alignment:
Q  25 aaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcct 73  Q
    ||||||| ||||||||||||||||||||| ||||| |||||||||||||    
T  199713 aaaatcgtaacttcttgaaacatagggggccaaaagtgcaattaagcct 199665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0854 (Bit Score: 36; Significance: 0.00000000005; HSPs: 2)
Name: scaffold0854
Description:

Target: scaffold0854; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 16 - 71
Target Start/End: Original strand, 3385 - 3440
Alignment:
Q  16 tagggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagc 71  Q
    ||||||| ||||||||||||||||| ||||||||| || ||||| |||||||||||    
T  3385 tagggggccaaaatcgcaacttcttaaaacataggaggccaaaagtgcaattaagc 3440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0854; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 24 - 71
Target Start/End: Complemental strand, 1891 - 1844
Alignment:
Q  24 caaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagc 71  Q
    ||||||| ||||||||||||||||||| || ||||| |||||||||||    
T  1891 caaaatctcaacttcttgaaacataggaggccaaaaatgcaattaagc 1844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2010 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold2010
Description:

Target: scaffold2010; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 16 - 74
Target Start/End: Complemental strand, 549 - 491
Alignment:
Q  16 tagggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcctt 74  Q
    ||||||| |||||||||||||| |  ||| |||||||||||||| ||||||||||||||    
T  549 tagggggccaaaatcgcaacttttgaaaagatagggggtcaaaagtgcaattaagcctt 491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 405452 - 405508
Alignment:
Q  16 tagggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcct 73  Q
    |||||||||||||||||||||||||||||| | ||| || |||||||| |||||||||    
T  405452 tagggggtcaaaatcgcaacttcttgaaac-ttgggagttaaaactgctattaagcct 405508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 170 - 225
Target Start/End: Complemental strand, 25640 - 25585
Alignment:
Q  170 tatttattgaaaaagtctaatatttcaatttccgatccattgaatgcataaatttc 225  Q
    |||||||||||| |||||||||||||||||| |||| || |||||| | |||||||    
T  25640 tatttattgaaagagtctaatatttcaattttcgatgcagtgaatgtacaaatttc 25585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 20 - 75
Target Start/End: Complemental strand, 201359 - 201304
Alignment:
Q  20 gggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcctta 75  Q
    |||||||||||||||  |  ||| || |||||||||||||||||||||||||||||    
T  201359 gggtcaaaatcgcaagattgtgatacttagggggtcaaaactgcaattaagcctta 201304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 24 - 74
Target Start/End: Complemental strand, 22838 - 22787
Alignment:
Q  24 caaaatcgcaacttcttgaaacataggggg-tcaaaactgcaattaagcctt 74  Q
    |||||||||||||||| |||||||||||||  ||||| ||||||||||||||    
T  22838 caaaatcgcaacttctagaaacatagggggaccaaaagtgcaattaagcctt 22787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1301 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold1301
Description:

Target: scaffold1301; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 16 - 74
Target Start/End: Original strand, 1305 - 1363
Alignment:
Q  16 tagggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcctt 74  Q
    ||||||| |||||||||||||| | |||| ||| |||| ||||| ||||||||||||||    
T  1305 tagggggccaaaatcgcaacttttggaaagataaggggccaaaagtgcaattaagcctt 1363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 36 - 74
Target Start/End: Complemental strand, 21201 - 21164
Alignment:
Q  36 ttcttgaaacatagggggtcaaaactgcaattaagcctt 74  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  21201 ttcttgaaacatagggg-tcaaaactgcaattaagcctt 21164  T

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Target: scaffold0028 (Bit Score: 31; Significance: 0.00000004; HSPs: 2)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 16 - 74
Target Start/End: Original strand, 32267 - 32325
Alignment:
Q  16 tagggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcctt 74  Q
    ||||||| |||||||||||||| | |||| |||||||| ||||| | ||||||||||||    
T  32267 tagggggccaaaatcgcaacttttggaaagatagggggccaaaagtacaattaagcctt 32325  T

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Target: scaffold0028; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 16 - 72
Target Start/End: Complemental strand, 32035 - 31979
Alignment:
Q  16 tagggggtcaaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcc 72  Q
    ||||||| |||||| ||||||| | |||| |||||||| ||||| ||||||||||||    
T  32035 tagggggccaaaattgcaacttttggaaagatagggggccaaaagtgcaattaagcc 31979  T

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Target: scaffold0019 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 24 - 74
Target Start/End: Original strand, 122595 - 122645
Alignment:
Q  24 caaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcctt 74  Q
    |||||||||||||| | |||| |||||||| ||||| ||||||||||||||    
T  122595 caaaatcgcaacttttggaaagatagggggccaaaagtgcaattaagcctt 122645  T

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Target: scaffold0725 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0725
Description:

Target: scaffold0725; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 25 - 73
Target Start/End: Original strand, 6698 - 6746
Alignment:
Q  25 aaaatcgcaacttcttgaaacatagggggtcaaaactgcaattaagcct 73  Q
    ||||||||||||| ||||||| |||||||  |||||||| |||||||||    
T  6698 aaaatcgcaacttgttgaaacttagggggctaaaactgctattaagcct 6746  T

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Target: scaffold0246 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 147 - 247
Target Start/End: Complemental strand, 18214 - 18114
Alignment:
Q  147 ttaaggattctaaattaagaaattatttattgaaaaagtctaatatttcaatttccgatccattgaatgcataaatttcaataaaaacttactatctaaa 246  Q
    |||||||| |||||  |||||||||| |  | |||||||| |||||||||||| ||||| |||||| | |||||| ||    ||||||||||||| ||||    
T  18214 ttaaggatgctaaaagaagaaattatgtcataaaaaagtcaaatatttcaattcccgatacattgattacataaactttttaaaaaacttactatttaaa 18115  T
Q  247 g 247  Q
    |    
T  18114 g 18114  T

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