View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12669_low_11 (Length: 258)
Name: NF12669_low_11
Description: NF12669
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12669_low_11 |
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Alignment Details
Target: chr1 (Bit Score: 233; Significance: 1e-129; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 16 - 248
Target Start/End: Complemental strand, 50263931 - 50263699
Alignment:
| Q |
16 |
catttttaaggcctttaaatttaaagggtcttattttggtacaaccattttttggtggaaaagaaagaacattatcagagaaatgcatggaacaattatc |
115 |
Q |
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| T |
50263931 |
catttttaaggcctttaaatttaaagggtcttattttggtacaaccattttttggtggaaaagaaagaacattatcagagaaatgcatggaacaattatc |
50263832 |
T |
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| Q |
116 |
tggttctgctttgaatttagcagcttcagatacttattggcgattggcattaccatatggcgaagatcgcgatcatccatggtgtaatccattggtgaaa |
215 |
Q |
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| T |
50263831 |
tggttctgctttgaatttagcagcttcagatacttattggcgattggcattaccatatggcgaagatcgcgatcatccatggtgtaatccattggtgaaa |
50263732 |
T |
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| Q |
216 |
atggaggaattgaagctactgatgatgcctatg |
248 |
Q |
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| T |
50263731 |
atggaggaattgaagctactgatgatgcctatg |
50263699 |
T |
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