View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1266_high_6 (Length: 425)
Name: NF1266_high_6
Description: NF1266
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1266_high_6 |
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Alignment Details
Target: chr7 (Bit Score: 367; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 367; E-Value: 0
Query Start/End: Original strand, 30 - 408
Target Start/End: Original strand, 44542849 - 44543227
Alignment:
| Q |
30 |
ttttcttatgttgtttgcttccaaaagaagtcacagccatgaaacctgcaatggccaatgctccaccgaacacaagaagtcccgtaattccaccttcacc |
129 |
Q |
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| T |
44542849 |
ttttcttatgttgtttgcttccaaaagaagtcacagccatgaaacctgcaatagccaatgctccaccgaacacaagaagtcccgtaattccaccttcacc |
44542948 |
T |
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| Q |
130 |
accaataattatacttcctaaagaagtgtgtattttcttctttccatgtttgtttgttgtcttttcatcctccatcatcctttgtcaattgaagcaaagc |
229 |
Q |
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| T |
44542949 |
accaatagttatacttcctaaagaagtgtgtattttcttctttccatgtttgtttgttgtcttttcatcctccatcatcctttgtcaattgaagcaaagc |
44543048 |
T |
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| Q |
230 |
caagagatgaagtttatttattatcttacaaatataatagaaggagtgatatcatgcatgcagagtgagacagaatcgggcttcttcgttttgttcggat |
329 |
Q |
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| T |
44543049 |
caagagatgaagtttatttattatcttacaaatataatagaaggagtgatatcatgcatgcagagtgagacagaatcgggcttcttcgttttgttcggat |
44543148 |
T |
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| Q |
330 |
tcatcacttggaaccttcaccagcttcccacatgttaagaatgggagacacgtgtttgaatattgcccatcatttgttc |
408 |
Q |
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| T |
44543149 |
tcatcacttggaaccttcaccagcttcccacatgttaagaatgggagacacgtgtttgaatattgcccatgatttgttc |
44543227 |
T |
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