View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1266_low_53 (Length: 275)
Name: NF1266_low_53
Description: NF1266
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1266_low_53 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 260; Significance: 1e-145; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 260; E-Value: 1e-145
Query Start/End: Original strand, 8 - 275
Target Start/End: Original strand, 36605084 - 36605350
Alignment:
| Q |
8 |
ccaaaaatattctgagaataagagcgaaatgaaaatttgcagaggcgagataataaagcgtgaatttacggtacctggtagagactcttttgaggttgat |
107 |
Q |
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| T |
36605084 |
ccaaaaatattctgagaataagagcgaaatgaaaatttgcagaggcgagataataaagcgtgaatttacggtacctggtagagactcttttgaggttgat |
36605183 |
T |
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| Q |
108 |
cttcaatttcttcatcatcggaaaccctagatttcttattcggcgccatttttcacacagagagatttgtttgatggatttgatagtgcgttattgtgtt |
207 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36605184 |
cttcaatttcttcatcatcggaaaccctagatttcttattcggcgccatttttcacacagagagatttgtttgatggatttgatagtgcgttattgtgtt |
36605283 |
T |
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| Q |
208 |
tgtttttaaactcaattaatcgatttttaaacaaaaagtttgtggttgttcccgctataatttacgat |
275 |
Q |
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|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36605284 |
tg-ttttaaactcaattaatcgatttttaaacaaaaagtttgtggttgttcccgctataatttacgat |
36605350 |
T |
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