View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1266_low_68 (Length: 253)
Name: NF1266_low_68
Description: NF1266
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1266_low_68 |
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Alignment Details
Target: chr6 (Bit Score: 218; Significance: 1e-120; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 32464297 - 32464072
Alignment:
| Q |
1 |
tatttagtccccctacccacccgagtcaacaagtcgccaacatggtcattgcttgcgtcttcaaacttgttgaaatctctcgttgacgccaccttcgata |
100 |
Q |
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| T |
32464297 |
tatttagtccccctacccacccgagtcaacaagtcgccaacatggtcattgcttgcgtcttcaaacttgttgaaatctctcgttgacgccaccttcgata |
32464198 |
T |
|
| Q |
101 |
tttcccttcttattcttctcttcatcacatatataaatacatcctaccat-ttttcctttacttcaaaataaacataccctctttaatattttctcatct |
199 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32464197 |
tttcccttcttattcttctcttcatcacatatataaatacatcctaccattttttcctttacttcaaaataaacataccctctttaatattttctcatct |
32464098 |
T |
|
| Q |
200 |
tccctttaatattttgttcaaacttt |
225 |
Q |
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|||||||||||||||||||||||||| |
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| T |
32464097 |
tccctttaatattttgttcaaacttt |
32464072 |
T |
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