View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1266_low_72 (Length: 251)

Name: NF1266_low_72
Description: NF1266
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1266_low_72
NF1266_low_72
[»] chr1 (42 HSPs)
chr1 (12-251)||(28460604-28460854)
chr1 (171-244)||(12443441-12443513)
chr1 (172-216)||(7918219-7918263)
chr1 (170-214)||(40181876-40181920)
chr1 (173-216)||(1864888-1864931)
chr1 (172-214)||(14332652-14332694)
chr1 (175-217)||(25098562-25098604)
chr1 (170-216)||(34712391-34712437)
chr1 (171-229)||(36878467-36878525)
chr1 (171-216)||(6427356-6427401)
chr1 (170-215)||(19324567-19324612)
chr1 (170-223)||(19562622-19562675)
chr1 (175-216)||(25361896-25361937)
chr1 (156-209)||(37055871-37055924)
chr1 (171-216)||(38503326-38503371)
chr1 (175-216)||(44482240-44482281)
chr1 (172-216)||(10233260-10233304)
chr1 (170-245)||(25452129-25452202)
chr1 (170-229)||(13436463-13436522)
chr1 (172-211)||(34298443-34298482)
chr1 (173-216)||(39101190-39101233)
chr1 (171-229)||(9709826-9709884)
chr1 (172-214)||(12713337-12713379)
chr1 (172-214)||(12717428-12717470)
chr1 (171-209)||(31015049-31015087)
chr1 (171-229)||(39953141-39953199)
chr1 (166-216)||(49872838-49872888)
chr1 (171-216)||(398773-398818)
chr1 (171-216)||(1486717-1486762)
chr1 (171-212)||(16927197-16927238)
chr1 (171-216)||(17831539-17831584)
chr1 (171-216)||(20157358-20157403)
chr1 (171-216)||(27471574-27471619)
chr1 (171-216)||(34371720-34371764)
chr1 (171-216)||(36906003-36906048)
chr1 (171-223)||(113305-113357)
chr1 (172-216)||(9828051-9828095)
chr1 (172-216)||(10572597-10572641)
chr1 (173-217)||(17425100-17425144)
chr1 (172-216)||(35999330-35999374)
chr1 (173-229)||(39130762-39130818)
chr1 (173-229)||(52903257-52903313)
[»] chr6 (39 HSPs)
chr6 (170-244)||(21924915-21924989)
chr6 (171-241)||(7938122-7938192)
chr6 (170-244)||(9025469-9025548)
chr6 (170-216)||(7086800-7086846)
chr6 (171-229)||(7265588-7265646)
chr6 (171-229)||(19040358-19040416)
chr6 (172-216)||(7151419-7151463)
chr6 (170-213)||(7996389-7996432)
chr6 (170-213)||(8022369-8022412)
chr6 (170-229)||(33001284-33001343)
chr6 (170-216)||(26562694-26562740)
chr6 (171-216)||(24832594-24832639)
chr6 (171-216)||(30866152-30866197)
chr6 (173-229)||(5732505-5732561)
chr6 (176-216)||(7112789-7112829)
chr6 (176-216)||(8781316-8781356)
chr6 (170-210)||(8805586-8805626)
chr6 (172-216)||(9195762-9195806)
chr6 (170-214)||(24138431-24138475)
chr6 (173-216)||(9617442-9617485)
chr6 (177-216)||(11591878-11591917)
chr6 (171-229)||(7377985-7378043)
chr6 (171-244)||(9027184-9027262)
chr6 (174-216)||(9629392-9629434)
chr6 (176-214)||(13360382-13360420)
chr6 (170-216)||(13364713-13364759)
chr6 (171-213)||(34073358-34073400)
chr6 (171-212)||(9658885-9658926)
chr6 (171-216)||(10842538-10842583)
chr6 (171-216)||(10888982-10889027)
chr6 (171-216)||(13851742-13851787)
chr6 (173-210)||(31579239-31579276)
chr6 (171-216)||(32511674-32511719)
chr6 (171-215)||(1532246-1532290)
chr6 (170-214)||(7723260-7723304)
chr6 (172-216)||(17302354-17302398)
chr6 (172-216)||(19044471-19044515)
chr6 (168-216)||(21142121-21142169)
chr6 (172-216)||(26178689-26178733)
[»] chr8 (25 HSPs)
chr8 (170-243)||(14731717-14731791)
chr8 (170-229)||(13844591-13844650)
chr8 (168-229)||(3025554-3025615)
chr8 (171-216)||(34897091-34897136)
chr8 (171-215)||(39954288-39954332)
chr8 (170-216)||(12570516-12570562)
chr8 (170-216)||(12606837-12606883)
chr8 (170-216)||(31236585-31236631)
chr8 (171-216)||(24362210-24362255)
chr8 (171-216)||(34222953-34222998)
chr8 (172-244)||(4948659-4948730)
chr8 (172-212)||(14134706-14134746)
chr8 (173-229)||(33405379-33405435)
chr8 (171-214)||(4611540-4611583)
chr8 (173-216)||(4786346-4786389)
chr8 (173-216)||(11803267-11803310)
chr8 (173-216)||(11927094-11927137)
chr8 (170-216)||(27213552-27213598)
chr8 (171-216)||(20785473-20785518)
chr8 (172-212)||(7658470-7658510)
chr8 (170-214)||(12559116-12559160)
chr8 (172-212)||(13203648-13203688)
chr8 (172-216)||(15816137-15816181)
chr8 (172-216)||(20679403-20679447)
chr8 (170-214)||(29776041-29776085)
[»] chr2 (23 HSPs)
chr2 (171-225)||(21616768-21616822)
chr2 (171-244)||(42832256-42832329)
chr2 (173-216)||(30527603-30527646)
chr2 (173-216)||(39279683-39279726)
chr2 (171-229)||(34691800-34691858)
chr2 (171-229)||(34714212-34714270)
chr2 (172-229)||(5367199-5367256)
chr2 (171-216)||(23718032-23718077)
chr2 (171-216)||(24105704-24105749)
chr2 (171-216)||(37411252-37411297)
chr2 (171-216)||(44860326-44860371)
chr2 (170-210)||(21782832-21782872)
chr2 (173-216)||(2415325-2415368)
chr2 (172-215)||(2665897-2665940)
chr2 (171-214)||(28677915-28677958)
chr2 (173-216)||(35449521-35449564)
chr2 (172-244)||(25846748-25846817)
chr2 (171-216)||(18276527-18276572)
chr2 (171-216)||(18889599-18889644)
chr2 (171-216)||(27286300-27286345)
chr2 (171-216)||(31808083-31808128)
chr2 (173-214)||(32199150-32199191)
chr2 (173-214)||(36281693-36281734)
[»] chr4 (27 HSPs)
chr4 (173-244)||(22440581-22440651)
chr4 (173-216)||(5775366-5775409)
chr4 (172-222)||(36635331-36635381)
chr4 (162-216)||(999356-999410)
chr4 (170-216)||(26504307-26504353)
chr4 (173-214)||(903930-903971)
chr4 (168-225)||(9299054-9299110)
chr4 (163-216)||(18576045-18576098)
chr4 (171-216)||(40613456-40613501)
chr4 (171-211)||(8423731-8423771)
chr4 (180-244)||(10499251-10499314)
chr4 (170-210)||(56257938-56257978)
chr4 (171-230)||(33950142-33950201)
chr4 (173-216)||(40742599-40742642)
chr4 (170-216)||(13134455-13134501)
chr4 (170-216)||(15029770-15029816)
chr4 (170-216)||(15659768-15659814)
chr4 (171-216)||(3712517-3712562)
chr4 (172-213)||(7214533-7214574)
chr4 (171-216)||(16189715-16189760)
chr4 (172-229)||(54580018-54580075)
chr4 (174-214)||(9996849-9996889)
chr4 (171-223)||(11596353-11596405)
chr4 (163-211)||(30838208-30838256)
chr4 (170-214)||(35952627-35952671)
chr4 (172-212)||(37698719-37698759)
chr4 (164-216)||(44081585-44081637)
[»] chr7 (31 HSPs)
chr7 (173-215)||(16341504-16341546)
chr7 (175-216)||(5548686-5548727)
chr7 (163-216)||(7328699-7328752)
chr7 (170-229)||(3721098-3721157)
chr7 (162-216)||(17851428-17851482)
chr7 (171-229)||(20549797-20549855)
chr7 (171-229)||(42720885-42720943)
chr7 (171-216)||(32308126-32308171)
chr7 (165-229)||(1401025-1401089)
chr7 (172-216)||(22868049-22868093)
chr7 (171-210)||(2424620-2424659)
chr7 (173-216)||(2425741-2425784)
chr7 (173-216)||(5233637-5233680)
chr7 (173-216)||(15902830-15902873)
chr7 (171-210)||(29787383-29787422)
chr7 (178-216)||(22602718-22602756)
chr7 (171-213)||(27093424-27093466)
chr7 (171-213)||(27184835-27184877)
chr7 (171-216)||(8160422-8160467)
chr7 (175-216)||(9482944-9482985)
chr7 (173-230)||(12278843-12278899)
chr7 (171-216)||(19206056-19206101)
chr7 (171-216)||(19992007-19992052)
chr7 (171-244)||(28155576-28155649)
chr7 (168-209)||(30813815-30813856)
chr7 (172-216)||(5835254-5835298)
chr7 (172-216)||(5956280-5956324)
chr7 (172-216)||(6630920-6630964)
chr7 (170-210)||(12289119-12289159)
chr7 (176-216)||(17307904-17307944)
chr7 (173-229)||(38143231-38143287)
[»] chr5 (23 HSPs)
chr5 (170-216)||(39205885-39205931)
chr5 (171-216)||(6471897-6471942)
chr5 (170-216)||(16203803-16203849)
chr5 (170-216)||(23012416-23012462)
chr5 (171-229)||(30502383-30502441)
chr5 (171-229)||(30542726-30542784)
chr5 (170-216)||(41091265-41091311)
chr5 (171-216)||(3966509-3966554)
chr5 (171-212)||(12927660-12927701)
chr5 (171-216)||(27144469-27144514)
chr5 (172-213)||(35017044-35017085)
chr5 (171-216)||(36838549-36838594)
chr5 (172-216)||(3751938-3751982)
chr5 (174-214)||(26312778-26312818)
chr5 (173-229)||(28588669-28588725)
chr5 (176-215)||(24273039-24273078)
chr5 (176-215)||(24389136-24389175)
chr5 (170-216)||(18421849-18421895)
chr5 (171-216)||(11685945-11685990)
chr5 (175-216)||(14873527-14873568)
chr5 (171-212)||(17593734-17593775)
chr5 (171-216)||(34879356-34879401)
chr5 (176-232)||(15086482-15086538)
[»] chr3 (30 HSPs)
chr3 (170-216)||(11313808-11313854)
chr3 (172-214)||(48353741-48353783)
chr3 (171-229)||(49505149-49505207)
chr3 (173-228)||(4201404-4201459)
chr3 (173-216)||(32804548-32804591)
chr3 (171-229)||(7928456-7928514)
chr3 (171-229)||(8383263-8383321)
chr3 (170-216)||(10455795-10455841)
chr3 (168-210)||(11251981-11252023)
chr3 (173-222)||(2731820-2731869)
chr3 (171-216)||(8039843-8039888)
chr3 (170-210)||(27277852-27277892)
chr3 (172-216)||(29508451-29508495)
chr3 (170-213)||(9624646-9624689)
chr3 (173-216)||(16192758-16192801)
chr3 (175-229)||(8789545-8789599)
chr3 (172-214)||(12704014-12704056)
chr3 (183-241)||(13414487-13414545)
chr3 (173-242)||(10268468-10268537)
chr3 (171-212)||(10690274-10690315)
chr3 (172-213)||(11493372-11493413)
chr3 (171-216)||(11665950-11665995)
chr3 (173-214)||(18180547-18180588)
chr3 (171-216)||(25948895-25948940)
chr3 (171-216)||(34307788-34307833)
chr3 (176-216)||(15314884-15314924)
chr3 (172-216)||(17005627-17005671)
chr3 (173-229)||(20691327-20691383)
chr3 (173-229)||(25093510-25093566)
chr3 (172-212)||(29112292-29112332)
[»] scaffold0020 (1 HSPs)
scaffold0020 (170-244)||(135287-135366)
[»] scaffold0123 (1 HSPs)
scaffold0123 (171-216)||(44533-44578)
[»] scaffold0036 (1 HSPs)
scaffold0036 (172-216)||(9755-9799)
[»] scaffold0022 (1 HSPs)
scaffold0022 (173-212)||(90851-90890)
[»] scaffold0044 (1 HSPs)
scaffold0044 (174-216)||(53189-53231)
[»] scaffold0008 (1 HSPs)
scaffold0008 (170-216)||(263380-263426)


Alignment Details
Target: chr1 (Bit Score: 165; Significance: 2e-88; HSPs: 42)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 12 - 251
Target Start/End: Original strand, 28460604 - 28460854
Alignment:
Q  12 gaatatctataatgtgaggtttttctccaaataagcatcatgtcaaataaaccgttaaacacttccactgtggttggtattaaaaaacagaactgctatt 111  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28460604 gaatatctataatgtgaggtttttctccaaataagcatcatgtcaaataaaccgttaaacacttccactgtggttggtattaaaaaacagaactgctatt 28460703  T
Q  112 tatcgtgaactatga-----------agtacggatatcaaatataacacgaatattgatatatcgatattgctaataatttgagaaaatcaaataattaa 200  Q
    | |||| ||||||||           | |||||||| |||||| |||||| ||||||||||||||| |||| ||||||||| ||||||||||||||||||    
T  28460704 tgtcgttaactatgagtacggatacgaatacggataccaaatacaacacggatattgatatatcgacattgttaataatttcagaaaatcaaataattaa 28460803  T
Q  201 gtgtaattatatgtgtacgtgtccgacaccgagacacgcctaattttaaaa 251  Q
     ||||||||||| ||||||||||||||||||| ||||||||||||||||||    
T  28460804 atgtaattatatatgtacgtgtccgacaccgaaacacgcctaattttaaaa 28460854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 171 - 244
Target Start/End: Complemental strand, 12443513 - 12443441
Alignment:
Q  171 gctaataatttgagaaaatcaaataattaagtgtaattatatgtgtacgtgtccgacaccgagacacgcctaat 244  Q
    ||||||||||||||||||||| |||||| ||||||||| |||||| ||||||| ||||||||||||| ||||||    
T  12443513 gctaataatttgagaaaatcacataattcagtgtaattgtatgtg-acgtgtcggacaccgagacacacctaat 12443441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 172 - 216
Target Start/End: Complemental strand, 7918263 - 7918219
Alignment:
Q  172 ctaataatttgagaaaatcaaataattaagtgtaattatatgtgt 216  Q
    |||||||||||||||||||| |||||| |||||||||||||||||    
T  7918263 ctaataatttgagaaaatcacataattcagtgtaattatatgtgt 7918219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 170 - 214
Target Start/End: Original strand, 40181876 - 40181920
Alignment:
Q  170 tgctaataatttgagaaaatcaaataattaagtgtaattatatgt 214  Q
    |||||||||||||||||||||| |||||| |||||||||||||||    
T  40181876 tgctaataatttgagaaaatcacataattcagtgtaattatatgt 40181920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 173 - 216
Target Start/End: Complemental strand, 1864931 - 1864888
Alignment:
Q  173 taataatttgagaaaatcaaataattaagtgtaattatatgtgt 216  Q
    ||||||||||||||||||| |||||| |||||||||||||||||    
T  1864931 taataatttgagaaaatcacataattcagtgtaattatatgtgt 1864888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 172 - 214
Target Start/End: Complemental strand, 14332694 - 14332652
Alignment:
Q  172 ctaataatttgagaaaatcaaataattaagtgtaattatatgt 214  Q
    |||||||||||||||||||| |||||| |||||||||||||||    
T  14332694 ctaataatttgagaaaatcacataatttagtgtaattatatgt 14332652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 175 - 217
Target Start/End: Complemental strand, 25098604 - 25098562
Alignment:
Q  175 ataatttgagaaaatcaaataattaagtgtaattatatgtgta 217  Q
    ||||||||||||||||| |||||| ||||||||||||||||||    
T  25098604 ataatttgagaaaatcacataattcagtgtaattatatgtgta 25098562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 170 - 216
Target Start/End: Complemental strand, 34712437 - 34712391
Alignment:
Q  170 tgctaataatttgagaaaatcaaataattaagtgtaattatatgtgt 216  Q
    |||||||||||||||||||| | |||||| |||||||||||||||||    
T  34712437 tgctaataatttgagaaaataacataatttagtgtaattatatgtgt 34712391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 171 - 229
Target Start/End: Original strand, 36878467 - 36878525
Alignment:
Q  171 gctaataatttgagaaaatcaaataattaagtgtaattatatgtgtacgtgtccgacac 229  Q
    ||||||||||||||||||||| |||||| |||||||||||| ||||  ||||| |||||    
T  36878467 gctaataatttgagaaaatcacataattcagtgtaattataggtgtcggtgtctgacac 36878525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 171 - 216
Target Start/End: Original strand, 6427356 - 6427401
Alignment:
Q  171 gctaataatttgagaaaatcaaataattaagtgtaattatatgtgt 216  Q
    ||||||||||||||||||||| |||||| | |||||||||||||||    
T  6427356 gctaataatttgagaaaatcacataattcaatgtaattatatgtgt 6427401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 170 - 215
Target Start/End: Original strand, 19324567 - 19324612
Alignment:
Q  170 tgctaataatttgagaaaatcaaataattaagtgtaattatatgtg 215  Q
    |||| ||||||||||||||||| |||||| ||||||||||||||||    
T  19324567 tgctgataatttgagaaaatcacataattcagtgtaattatatgtg 19324612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 170 - 223
Target Start/End: Complemental strand, 19562675 - 19562622
Alignment:
Q  170 tgctaataatttgagaaaatcaaataattaagtgtaattatatgtgtacgtgtc 223  Q
    |||||||||||||||||||||  ||| || |||||||||||||||||| |||||    
T  19562675 tgctaataatttgagaaaatctcatagttcagtgtaattatatgtgtaggtgtc 19562622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 175 - 216
Target Start/End: Original strand, 25361896 - 25361937
Alignment:
Q  175 ataatttgagaaaatcaaataattaagtgtaattatatgtgt 216  Q
    ||||||||||||||||| |||||| |||||||||||||||||    
T  25361896 ataatttgagaaaatcacataattcagtgtaattatatgtgt 25361937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 156 - 209
Target Start/End: Complemental strand, 37055924 - 37055871
Alignment:
Q  156 tgatatatcgatattgctaataatttgagaaaatcaaataattaagtgtaatta 209  Q
    ||||| ||||||| |||||||||||||||||||| | |||||| ||||||||||    
T  37055924 tgatacatcgatactgctaataatttgagaaaattacataatttagtgtaatta 37055871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 171 - 216
Target Start/End: Original strand, 38503326 - 38503371
Alignment:
Q  171 gctaataatttgagaaaatcaaataattaagtgtaattatatgtgt 216  Q
    ||||||||||||||||||||| ||| || |||||||||||||||||    
T  38503326 gctaataatttgagaaaatcatatatttcagtgtaattatatgtgt 38503371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 175 - 216
Target Start/End: Original strand, 44482240 - 44482281
Alignment:
Q  175 ataatttgagaaaatcaaataattaagtgtaattatatgtgt 216  Q
    ||||||||||||||||| |||||| |||||||||||||||||    
T  44482240 ataatttgagaaaatcacataattcagtgtaattatatgtgt 44482281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 216
Target Start/End: Original strand, 10233260 - 10233304
Alignment:
Q  172 ctaataatttgagaaaatcaaataattaagtgtaattatatgtgt 216  Q
    ||||||| |||||||||||| |||||| |||||||||||||||||    
T  10233260 ctaataaattgagaaaatcacataattcagtgtaattatatgtgt 10233304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 170 - 245
Target Start/End: Complemental strand, 25452202 - 25452129
Alignment:
Q  170 tgctaataatttgagaaaatcaaataattaagtgtaattatatgtgtacgtgtccgacaccgagacacgcctaatt 245  Q
    |||||||||||||||||||||  |||||| ||||||||  |||||||  ||||| |||||||  ||||||||||||    
T  25452202 tgctaataatttgagaaaatctcataattcagtgtaat--tatgtgtcggtgtcagacaccggaacacgcctaatt 25452129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 229
Target Start/End: Original strand, 13436463 - 13436522
Alignment:
Q  170 tgctaataatttgagaaaatcaaataattaagtgtaattatatgtgtacgtgtccgacac 229  Q
    |||||||||||| || |||||| |||||| |||||||||||||||||  ||||| |||||    
T  13436463 tgctaataatttaaggaaatcacataattcagtgtaattatatgtgttggtgtcggacac 13436522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 211
Target Start/End: Original strand, 34298443 - 34298482
Alignment:
Q  172 ctaataatttgagaaaatcaaataattaagtgtaattata 211  Q
    |||||||||||||||||||| |||||| ||||||||||||    
T  34298443 ctaataatttgagaaaatcacataattcagtgtaattata 34298482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 173 - 216
Target Start/End: Complemental strand, 39101233 - 39101190
Alignment:
Q  173 taataatttgagaaaatcaaataattaagtgtaattatatgtgt 216  Q
    ||||||||||||||||| | ||||||||||||||||||| ||||    
T  39101233 taataatttgagaaaataacataattaagtgtaattataggtgt 39101190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 229
Target Start/End: Original strand, 9709826 - 9709884
Alignment:
Q  171 gctaataatttgagaaaatcaaataattaagtgtaattatatgtgtacgtgtccgacac 229  Q
    ||||||||||||||||||||| ||||||   |||||||||||||||  ||||| |||||    
T  9709826 gctaataatttgagaaaatcacataattcgttgtaattatatgtgtcggtgtcggacac 9709884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 214
Target Start/End: Complemental strand, 12713379 - 12713337
Alignment:
Q  172 ctaataatttgagaaaatcaaataattaagtgtaattatatgt 214  Q
    |||||||||| ||||||||| |||||| |||||||||||||||    
T  12713379 ctaataatttaagaaaatcacataatttagtgtaattatatgt 12713337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 214
Target Start/End: Complemental strand, 12717470 - 12717428
Alignment:
Q  172 ctaataatttgagaaaatcaaataattaagtgtaattatatgt 214  Q
    |||||||||| ||||||||| |||||| |||||||||||||||    
T  12717470 ctaataatttaagaaaatcacataatttagtgtaattatatgt 12717428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 209
Target Start/End: Original strand, 31015049 - 31015087
Alignment:
Q  171 gctaataatttgagaaaatcaaataattaagtgtaatta 209  Q
    ||||||||||||||||||||| |||||| ||||||||||    
T  31015049 gctaataatttgagaaaatcacataattcagtgtaatta 31015087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 229
Target Start/End: Complemental strand, 39953199 - 39953141
Alignment:
Q  171 gctaataatttgagaaaatcaaataattaagtgtaattatatgtgtacgtgtccgacac 229  Q
    ||||||||||| ||||||||| |||||| ||||||||| |||||||  ||||| |||||    
T  39953199 gctaataattttagaaaatcacataatttagtgtaattgtatgtgtcggtgtcggacac 39953141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 216
Target Start/End: Original strand, 49872838 - 49872888
Alignment:
Q  166 atattgctaataatttgagaaaatcaaataattaagtgtaattatatgtgt 216  Q
    ||||||||||| |||||||||||  | |||||| |||||||||||||||||    
T  49872838 atattgctaatcatttgagaaaactatataattcagtgtaattatatgtgt 49872888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 171 - 216
Target Start/End: Complemental strand, 398818 - 398773
Alignment:
Q  171 gctaataatttgagaaaatcaaataattaagtgtaattatatgtgt 216  Q
    ||||||||||||| ||||||| |||||| |||||||||||| ||||    
T  398818 gctaataatttgaaaaaatcacataattcagtgtaattataggtgt 398773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 171 - 216
Target Start/End: Complemental strand, 1486762 - 1486717
Alignment:
Q  171 gctaataatttgagaaaatcaaataattaagtgtaattatatgtgt 216  Q
    ||||||||||||| ||||||| |||||| |||||||||||| ||||    
T  1486762 gctaataatttgaaaaaatcacataattcagtgtaattataagtgt 1486717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 171 - 212
Target Start/End: Complemental strand, 16927238 - 16927197
Alignment:
Q  171 gctaataatttgagaaaatcaaataattaagtgtaattatat 212  Q
    ||||||||||||| ||||||| |||||| |||||||||||||    
T  16927238 gctaataatttgaaaaaatcatataattcagtgtaattatat 16927197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 171 - 216
Target Start/End: Complemental strand, 17831584 - 17831539
Alignment:
Q  171 gctaataatttgagaaaatcaaataattaagtgtaattatatgtgt 216  Q
    ||||||||||||||||||||| || ||| |||||||| ||||||||    
T  17831584 gctaataatttgagaaaatcacattattcagtgtaatcatatgtgt 17831539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 171 - 216
Target Start/End: Complemental strand, 20157403 - 20157358
Alignment:
Q  171 gctaataatttgagaaaatcaaataattaagtgtaattatatgtgt 216  Q
    ||||||||| ||||||||||| |||||| |||||||| ||||||||    
T  20157403 gctaataatgtgagaaaatcacataattcagtgtaatcatatgtgt 20157358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 171 - 216
Target Start/End: Complemental strand, 27471619 - 27471574
Alignment:
Q  171 gctaataatttgagaaaatcaaataattaagtgtaattatatgtgt 216  Q
    |||||||||||||||||| || |||||| |||||||||| ||||||    
T  27471619 gctaataatttgagaaaagcacataattcagtgtaattacatgtgt 27471574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 171 - 216
Target Start/End: Original strand, 34371720 - 34371764
Alignment:
Q  171 gctaataatttgagaaaatcaaataattaagtgtaattatatgtgt 216  Q
    |||||||||| |||||||||| |||||| |||||||||||||||||    
T  34371720 gctaataatt-gagaaaatcacataattcagtgtaattatatgtgt 34371764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 171 - 216
Target Start/End: Original strand, 36906003 - 36906048
Alignment:
Q  171 gctaataatttgagaaaatcaaataattaagtgtaattatatgtgt 216  Q
    ||||||||| ||||||||||| |||||| || ||||||||||||||    
T  36906003 gctaataatctgagaaaatcacataattcagagtaattatatgtgt 36906048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 223
Target Start/End: Original strand, 113305 - 113357
Alignment:
Q  171 gctaataatttgagaaaatcaaataattaagtgtaattatatgtgtacgtgtc 223  Q
    ||||||||||||| ||||||| |||||| |||||||||| | ||||| |||||    
T  113305 gctaataatttgaaaaaatcacataattcagtgtaattacaagtgtaggtgtc 113357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 216
Target Start/End: Original strand, 9828051 - 9828095
Alignment:
Q  172 ctaataatttgagaaaatcaaataattaagtgtaattatatgtgt 216  Q
    |||||||||||| ||||||| |||||| ||||||||| |||||||    
T  9828051 ctaataatttgataaaatcacataattcagtgtaattttatgtgt 9828095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 216
Target Start/End: Complemental strand, 10572641 - 10572597
Alignment:
Q  172 ctaataatttgagaaaatcaaataattaagtgtaattatatgtgt 216  Q
    |||||||||||||||||||| ||||||  ||||||||| ||||||    
T  10572641 ctaataatttgagaaaatcacataattcggtgtaattaaatgtgt 10572597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 217
Target Start/End: Complemental strand, 17425144 - 17425100
Alignment:
Q  173 taataatttgagaaaatcaaataattaagtgtaattatatgtgta 217  Q
    ||||||||||| ||||||| |||||| | ||||||||||||||||    
T  17425144 taataatttgataaaatcacataattcaatgtaattatatgtgta 17425100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 216
Target Start/End: Complemental strand, 35999374 - 35999330
Alignment:
Q  172 ctaataatttgagaaaatcaaataattaagtgtaattatatgtgt 216  Q
    |||||||||| ||||||||| |||||| ||| |||||||||||||    
T  35999374 ctaataatttaagaaaatcatataatttagtataattatatgtgt 35999330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 229
Target Start/End: Complemental strand, 39130818 - 39130762
Alignment:
Q  173 taataatttgagaaaatcaaataattaagtgtaattatatgtgtacgtgtccgacac 229  Q
    ||||||||| ||||||| | |||||| |||||||||||||||||  ||||| |||||    
T  39130818 taataattttagaaaattatataatttagtgtaattatatgtgtcggtgtcggacac 39130762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 229
Target Start/End: Original strand, 52903257 - 52903313
Alignment:
Q  173 taataatttgagaaaatcaaataattaagtgtaattatatgtgtacgtgtccgacac 229  Q
    ||||||||| | ||||||| |||||| |||||||||||||||||  ||||| |||||    
T  52903257 taataatttaataaaatcatataattcagtgtaattatatgtgtcggtgtcggacac 52903313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 51; Significance: 2e-20; HSPs: 39)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 170 - 244
Target Start/End: Complemental strand, 21924989 - 21924915
Alignment:
Q  170 tgctaataatttgagaaaatcaaataattaagtgtaattatatgtgtacgtgtccgacaccgagacacgcctaat 244  Q
    ||||||||||||||||| ||||||||||| |||||||||||||||||  ||||| ||||||| ||||||||||||    
T  21924989 tgctaataatttgagaatatcaaataattcagtgtaattatatgtgtcggtgtcggacaccgggacacgcctaat 21924915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 171 - 241
Target Start/End: Original strand, 7938122 - 7938192
Alignment:
Q  171 gctaataatttgagaaaatcaaataattaagtgtaattatatgtgtacgtgtccgacaccgagacacgcct 241  Q
    ||||||||||||| ||||||| |||||| |||||||||||| ||||  |||||||||||||||||||||||    
T  7938122 gctaataatttgaaaaaatcatataatttagtgtaattataagtgtcggtgtccgacaccgagacacgcct 7938192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 170 - 244
Target Start/End: Complemental strand, 9025548 - 9025469
Alignment:
Q  170 tgctaataatttgagaaaatcaaataattaagtgtaattatatgtgt-----acgtgtccgacaccgagacacgcctaat 244  Q
    |||||||||||||||||||||| |||||| |||||||||||||||||      |||||||||||||| ||||||||||||    
T  9025548 tgctaataatttgagaaaatcacataattcagtgtaattatatgtgtcggtgtcgtgtccgacaccgggacacgcctaat 9025469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 170 - 216
Target Start/End: Original strand, 7086800 - 7086846
Alignment:
Q  170 tgctaataatttgagaaaatcaaataattaagtgtaattatatgtgt 216  Q
    |||||||||||||||||||||| |||||| |||||||||||||||||    
T  7086800 tgctaataatttgagaaaatcacataatttagtgtaattatatgtgt 7086846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 171 - 229
Target Start/End: Complemental strand, 7265646 - 7265588
Alignment:
Q  171 gctaataatttgagaaaatcaaataattaagtgtaattatatgtgtacgtgtccgacac 229  Q
    ||||||||||||||||||||| |||||| |||||||||||||||||  ||||| |||||    
T  7265646 gctaataatttgagaaaatcacataattcagtgtaattatatgtgtcggtgtcggacac 7265588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 171 - 229
Target Start/End: Original strand, 19040358 - 19040416
Alignment:
Q  171 gctaataatttgagaaaatcaaataattaagtgtaattatatgtgtacgtgtccgacac 229  Q
    ||||||||||||||||||||| |||||| |||||||||||||||||  ||||| |||||    
T  19040358 gctaataatttgagaaaatcacataattcagtgtaattatatgtgtctgtgtcggacac 19040416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 172 - 216
Target Start/End: Original strand, 7151419 - 7151463
Alignment:
Q  172 ctaataatttgagaaaatcaaataattaagtgtaattatatgtgt 216  Q
    |||||||||||| ||||||| ||||||||||||||||||||||||    
T  7151419 ctaataatttgaaaaaatcacataattaagtgtaattatatgtgt 7151463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 170 - 213
Target Start/End: Complemental strand, 7996432 - 7996389
Alignment:
Q  170 tgctaataatttgagaaaatcaaataattaagtgtaattatatg 213  Q
    |||||||||||||||||||||| |||||| ||||||||||||||    
T  7996432 tgctaataatttgagaaaatcatataattcagtgtaattatatg 7996389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 170 - 213
Target Start/End: Original strand, 8022369 - 8022412
Alignment:
Q  170 tgctaataatttgagaaaatcaaataattaagtgtaattatatg 213  Q
    |||||||||||||||||||||| |||||| ||||||||||||||    
T  8022369 tgctaataatttgagaaaatcatataattcagtgtaattatatg 8022412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 170 - 229
Target Start/End: Complemental strand, 33001343 - 33001284
Alignment:
Q  170 tgctaataatttgagaaaatcaaataattaagtgtaattatatgtgtacgtgtccgacac 229  Q
    |||||||||||||| ||||||| |||||||| |||||||||||||||  ||||| |||||    
T  33001343 tgctaataatttgaaaaaatcacataattaaatgtaattatatgtgtcggtgtcggacac 33001284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 170 - 216
Target Start/End: Original strand, 26562694 - 26562740
Alignment:
Q  170 tgctaataatttgagaaaatcaaataattaagtgtaattatatgtgt 216  Q
    |||||| ||||||||||||||| |||||| |||||||||||||||||    
T  26562694 tgctaaaaatttgagaaaatcacataattcagtgtaattatatgtgt 26562740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 171 - 216
Target Start/End: Original strand, 24832594 - 24832639
Alignment:
Q  171 gctaataatttgagaaaatcaaataattaagtgtaattatatgtgt 216  Q
    ||||||||||||||||||||  |||||| |||||||||||||||||    
T  24832594 gctaataatttgagaaaatcttataatttagtgtaattatatgtgt 24832639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 171 - 216
Target Start/End: Complemental strand, 30866197 - 30866152
Alignment:
Q  171 gctaataatttgagaaaatcaaataattaagtgtaattatatgtgt 216  Q
    ||||||||||||||||||||| |||||| | |||||||||||||||    
T  30866197 gctaataatttgagaaaatcacataattcaatgtaattatatgtgt 30866152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 173 - 229
Target Start/End: Complemental strand, 5732561 - 5732505
Alignment:
Q  173 taataatttgagaaaatcaaataattaagtgtaattatatgtgtacgtgtccgacac 229  Q
    ||||||||||||||||||| ||| || |||||||||||||||||  ||||| |||||    
T  5732561 taataatttgagaaaatcacatattttagtgtaattatatgtgtcggtgtcggacac 5732505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 176 - 216
Target Start/End: Original strand, 7112789 - 7112829
Alignment:
Q  176 taatttgagaaaatcaaataattaagtgtaattatatgtgt 216  Q
    |||||||||||||| |||||||||| |||||||||||||||    
T  7112789 taatttgagaaaatgaaataattaaatgtaattatatgtgt 7112829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 176 - 216
Target Start/End: Complemental strand, 8781356 - 8781316
Alignment:
Q  176 taatttgagaaaatcaaataattaagtgtaattatatgtgt 216  Q
    |||||||||||||| |||||||||| |||||||||||||||    
T  8781356 taatttgagaaaatgaaataattaaatgtaattatatgtgt 8781316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 170 - 210
Target Start/End: Complemental strand, 8805626 - 8805586
Alignment:
Q  170 tgctaataatttgagaaaatcaaataattaagtgtaattat 210  Q
    |||||||||||||||||||||| |||||| |||||||||||    
T  8805626 tgctaataatttgagaaaatcacataatttagtgtaattat 8805586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 216
Target Start/End: Complemental strand, 9195806 - 9195762
Alignment:
Q  172 ctaataatttgagaaaatcaaataattaagtgtaattatatgtgt 216  Q
    |||||||||||||||||| | |||||| |||||||||||||||||    
T  9195806 ctaataatttgagaaaatgacataatttagtgtaattatatgtgt 9195762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 170 - 214
Target Start/End: Original strand, 24138431 - 24138475
Alignment:
Q  170 tgctaataatttgagaaaatcaaataattaagtgtaattatatgt 214  Q
    |||||||||||||| ||||||| ||||||||||||| ||||||||    
T  24138431 tgctaataatttgaaaaaatcatataattaagtgtatttatatgt 24138475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 173 - 216
Target Start/End: Original strand, 9617442 - 9617485
Alignment:
Q  173 taataatttgagaaaatcaaataattaagtgtaattatatgtgt 216  Q
    ||||||||||||||||||| |||||| | |||||||||||||||    
T  9617442 taataatttgagaaaatcacataattcaatgtaattatatgtgt 9617485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 216
Target Start/End: Complemental strand, 11591917 - 11591878
Alignment:
Q  177 aatttgagaaaatcaaataattaagtgtaattatatgtgt 216  Q
    ||||||||||||||| |||||| |||||||||||||||||    
T  11591917 aatttgagaaaatcacataattcagtgtaattatatgtgt 11591878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 229
Target Start/End: Original strand, 7377985 - 7378043
Alignment:
Q  171 gctaataatttgagaaaatcaaataattaagtgtaattatatgtgtacgtgtccgacac 229  Q
    ||||| ||||||||||||||| |||||| | |||||||||||||||  ||||| |||||    
T  7377985 gctaaaaatttgagaaaatcacataattcaatgtaattatatgtgtcggtgtcggacac 7378043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 244
Target Start/End: Original strand, 9027184 - 9027262
Alignment:
Q  171 gctaataatttgagaaaatcaaataattaagtgtaattatatgtgt-----acgtgtccgacaccgagacacgcctaat 244  Q
    ||||||||||||||| ||||| ||||||  ||||||||||||||||      |||||||||||||| |||||| |||||    
T  9027184 gctaataatttgagataatcacataattccgtgtaattatatgtgtcggtgtcgtgtccgacaccgggacacggctaat 9027262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 216
Target Start/End: Original strand, 9629392 - 9629434
Alignment:
Q  174 aataatttgagaaaatcaaataattaagtgtaattatatgtgt 216  Q
    |||||||||||||||||| |||||| | |||||||||||||||    
T  9629392 aataatttgagaaaatcacataattcaatgtaattatatgtgt 9629434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 214
Target Start/End: Complemental strand, 13360420 - 13360382
Alignment:
Q  176 taatttgagaaaatcaaataattaagtgtaattatatgt 214  Q
    |||||||||||||||| |||||| |||||||||||||||    
T  13360420 taatttgagaaaatcacataattcagtgtaattatatgt 13360382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 216
Target Start/End: Complemental strand, 13364759 - 13364713
Alignment:
Q  170 tgctaataatttgagaaaatcaaataattaagtgtaattatatgtgt 216  Q
    |||| ||||||||||||||||| |||||| |||||||| ||||||||    
T  13364759 tgcttataatttgagaaaatcatataattcagtgtaatcatatgtgt 13364713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 213
Target Start/End: Complemental strand, 34073400 - 34073358
Alignment:
Q  171 gctaataatttgagaaaatcaaataattaagtgtaattatatg 213  Q
    ||||||||||||||||||||  |||||| ||||||||||||||    
T  34073400 gctaataatttgagaaaatctcataattcagtgtaattatatg 34073358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 171 - 212
Target Start/End: Original strand, 9658885 - 9658926
Alignment:
Q  171 gctaataatttgagaaaatcaaataattaagtgtaattatat 212  Q
    ||||||||||| ||||||||| |||||| |||||||||||||    
T  9658885 gctaataatttaagaaaatcacataattcagtgtaattatat 9658926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 171 - 216
Target Start/End: Original strand, 10842538 - 10842583
Alignment:
Q  171 gctaataatttgagaaaatcaaataattaagtgtaattatatgtgt 216  Q
    ||||||||||||| ||||||| |||||| |||||||| ||||||||    
T  10842538 gctaataatttgaaaaaatcacataatttagtgtaatcatatgtgt 10842583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 171 - 216
Target Start/End: Complemental strand, 10889027 - 10888982
Alignment:
Q  171 gctaataatttgagaaaatcaaataattaagtgtaattatatgtgt 216  Q
    ||||||||||||| ||||||| |||||| ||||| |||||||||||    
T  10889027 gctaataatttgataaaatcacataatttagtgtgattatatgtgt 10888982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 171 - 216
Target Start/End: Original strand, 13851742 - 13851787
Alignment:
Q  171 gctaataatttgagaaaatcaaataattaagtgtaattatatgtgt 216  Q
    ||||||||||||||||||| |  ||||| |||||||||||||||||    
T  13851742 gctaataatttgagaaaataacgtaattcagtgtaattatatgtgt 13851787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 210
Target Start/End: Complemental strand, 31579276 - 31579239
Alignment:
Q  173 taataatttgagaaaatcaaataattaagtgtaattat 210  Q
    ||||||||||||||||||| |||||| |||||||||||    
T  31579276 taataatttgagaaaatcacataattcagtgtaattat 31579239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 171 - 216
Target Start/End: Complemental strand, 32511719 - 32511674
Alignment:
Q  171 gctaataatttgagaaaatcaaataattaagtgtaattatatgtgt 216  Q
    ||||||||||| ||||||||| |||||| |||||||||||| ||||    
T  32511719 gctaataatttaagaaaatcacataattcagtgtaattataagtgt 32511674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 215
Target Start/End: Original strand, 1532246 - 1532290
Alignment:
Q  171 gctaataatttgagaaaatcaaataattaagtgtaattatatgtg 215  Q
    ||||||||||||| ||||| | |||||| ||||||||||||||||    
T  1532246 gctaataatttgataaaattacataattcagtgtaattatatgtg 1532290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 214
Target Start/End: Complemental strand, 7723304 - 7723260
Alignment:
Q  170 tgctaataatttgagaaaatcaaataattaagtgtaattatatgt 214  Q
    |||||||||||||||||||||| |||||| ||  |||||||||||    
T  7723304 tgctaataatttgagaaaatcatataattcagcataattatatgt 7723260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 216
Target Start/End: Original strand, 17302354 - 17302398
Alignment:
Q  172 ctaataatttgagaaaatcaaataattaagtgtaattatatgtgt 216  Q
    |||||||||| ||||||||| ||||||  ||||||||||||||||    
T  17302354 ctaataatttaagaaaatcacataattttgtgtaattatatgtgt 17302398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 216
Target Start/End: Original strand, 19044471 - 19044515
Alignment:
Q  172 ctaataatttgagaaaatcaaataattaagtgtaattatatgtgt 216  Q
    ||||||||||||||| |||| |||||| ||||| |||||||||||    
T  19044471 ctaataatttgagaatatcacataattcagtgttattatatgtgt 19044515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 216
Target Start/End: Original strand, 21142121 - 21142169
Alignment:
Q  168 attgctaataatttgagaaaatcaaataattaagtgtaattatatgtgt 216  Q
    |||| ||||||||||||||||||| |||||| ||| || ||||||||||    
T  21142121 attgttaataatttgagaaaatcatataattcagtctagttatatgtgt 21142169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 216
Target Start/End: Complemental strand, 26178733 - 26178689
Alignment:
Q  172 ctaataatttgagaaaatcaaataattaagtgtaattatatgtgt 216  Q
    |||||||||||| ||||||| |||||| |||||||| ||||||||    
T  26178733 ctaataatttgataaaatcacataatttagtgtaatcatatgtgt 26178689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 47; Significance: 6e-18; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 170 - 243
Target Start/End: Original strand, 14731717 - 14731791
Alignment:
Q  170 tgctaataatttgagaaaatcaaataattaagtgtaattatatgtgt-acgtgtccgacaccgagacacgcctaa 243  Q
    |||||||||||||||||||||| |||||| |||||||||||||||||  |||||||||||||  |||||||||||    
T  14731717 tgctaataatttgagaaaatcacataatttagtgtaattatatgtgtgtcgtgtccgacaccaggacacgcctaa 14731791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 170 - 229
Target Start/End: Complemental strand, 13844650 - 13844591
Alignment:
Q  170 tgctaataatttgagaaaatcaaataattaagtgtaattatatgtgtacgtgtccgacac 229  Q
    |||||||||||||||||||||| |||||| |||||||||||||||||  ||||| |||||    
T  13844650 tgctaataatttgagaaaatcacataattgagtgtaattatatgtgtcggtgtcggacac 13844591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 168 - 229
Target Start/End: Original strand, 3025554 - 3025615
Alignment:
Q  168 attgctaataatttgagaaaatcaaataattaagtgtaattatatgtgtacgtgtccgacac 229  Q
    |||||||||||||||||||||||| |||||| |||||||||||| ||||  ||||| |||||    
T  3025554 attgctaataatttgagaaaatcacataattcagtgtaattataggtgtcagtgtcggacac 3025615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 171 - 216
Target Start/End: Original strand, 34897091 - 34897136
Alignment:
Q  171 gctaataatttgagaaaatcaaataattaagtgtaattatatgtgt 216  Q
    ||||||||||||||||||||| |||||| |||||||||||||||||    
T  34897091 gctaataatttgagaaaatcacataattcagtgtaattatatgtgt 34897136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 171 - 215
Target Start/End: Complemental strand, 39954332 - 39954288
Alignment:
Q  171 gctaataatttgagaaaatcaaataattaagtgtaattatatgtg 215  Q
    ||||||||||||||||||||| |||||| ||||||||||||||||    
T  39954332 gctaataatttgagaaaatcacataatttagtgtaattatatgtg 39954288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 170 - 216
Target Start/End: Complemental strand, 12570562 - 12570516
Alignment:
Q  170 tgctaataatttgagaaaatcaaataattaagtgtaattatatgtgt 216  Q
    |||||||||||| |||||| || ||||||||||||||||||||||||    
T  12570562 tgctaataatttaagaaaaacacataattaagtgtaattatatgtgt 12570516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 170 - 216
Target Start/End: Complemental strand, 12606883 - 12606837
Alignment:
Q  170 tgctaataatttgagaaaatcaaataattaagtgtaattatatgtgt 216  Q
    |||||||||||||||||||||| |||||| | |||||||||||||||    
T  12606883 tgctaataatttgagaaaatcatataattcaatgtaattatatgtgt 12606837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 170 - 216
Target Start/End: Complemental strand, 31236631 - 31236585
Alignment:
Q  170 tgctaataatttgagaaaatcaaataattaagtgtaattatatgtgt 216  Q
    |||||||||||||||||||||| |||||| | |||||||||||||||    
T  31236631 tgctaataatttgagaaaatcacataattcaatgtaattatatgtgt 31236585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 171 - 216
Target Start/End: Complemental strand, 24362255 - 24362210
Alignment:
Q  171 gctaataatttgagaaaatcaaataattaagtgtaattatatgtgt 216  Q
    ||||||||||||||| ||||| |||||| |||||||||||||||||    
T  24362255 gctaataatttgagagaatcacataattcagtgtaattatatgtgt 24362210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 171 - 216
Target Start/End: Original strand, 34222953 - 34222998
Alignment:
Q  171 gctaataatttgagaaaatcaaataattaagtgtaattatatgtgt 216  Q
    ||||||||||| | ||||||| ||||||||||||||||||||||||    
T  34222953 gctaataatttaataaaatcacataattaagtgtaattatatgtgt 34222998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 244
Target Start/End: Original strand, 4948659 - 4948730
Alignment:
Q  172 ctaataatttgagaaaatcaaataattaagtgtaattatatgtgtacgtgtccgacaccgagacacgcctaat 244  Q
    |||||||||||| ||||||| |||||| |||||||||| | ||||  ||||| |||| |||||||||||||||    
T  4948659 ctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcggaca-cgagacacgcctaat 4948730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 212
Target Start/End: Original strand, 14134706 - 14134746
Alignment:
Q  172 ctaataatttgagaaaatcaaataattaagtgtaattatat 212  Q
    |||||||||||||||||||| |||||| |||||||||||||    
T  14134706 ctaataatttgagaaaatcacataattcagtgtaattatat 14134746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 173 - 229
Target Start/End: Complemental strand, 33405435 - 33405379
Alignment:
Q  173 taataatttgagaaaatcaaataattaagtgtaattatatgtgtacgtgtccgacac 229  Q
    |||||||||||||||| || |||||| |||||||||||||||||  ||||| |||||    
T  33405435 taataatttgagaaaaacacataatttagtgtaattatatgtgtcggtgtcggacac 33405379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 171 - 214
Target Start/End: Original strand, 4611540 - 4611583
Alignment:
Q  171 gctaataatttgagaaaatcaaataattaagtgtaattatatgt 214  Q
    ||||||||||||||||||| | |||||| |||||||||||||||    
T  4611540 gctaataatttgagaaaataacataattcagtgtaattatatgt 4611583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 173 - 216
Target Start/End: Complemental strand, 4786389 - 4786346
Alignment:
Q  173 taataatttgagaaaatcaaataattaagtgtaattatatgtgt 216  Q
    ||||||||| ||||||||| |||||| |||||||||||||||||    
T  4786389 taataatttaagaaaatcacataattcagtgtaattatatgtgt 4786346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 173 - 216
Target Start/End: Original strand, 11803267 - 11803310
Alignment:
Q  173 taataatttgagaaaatcaaataattaagtgtaattatatgtgt 216  Q
    ||||||||| ||||||||| |||||| |||||||||||||||||    
T  11803267 taataatttaagaaaatcacataattcagtgtaattatatgtgt 11803310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 173 - 216
Target Start/End: Complemental strand, 11927137 - 11927094
Alignment:
Q  173 taataatttgagaaaatcaaataattaagtgtaattatatgtgt 216  Q
    ||||||||||| ||||||| |||||| |||||||||||||||||    
T  11927137 taataatttgataaaatcacataattcagtgtaattatatgtgt 11927094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 216
Target Start/End: Original strand, 27213552 - 27213598
Alignment:
Q  170 tgctaataatttgagaaaatcaaataattaagtgtaattatatgtgt 216  Q
    |||||||||||| ||||||||| |||||| | |||||||||||||||    
T  27213552 tgctaataatttcagaaaatcacataattcactgtaattatatgtgt 27213598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 171 - 216
Target Start/End: Complemental strand, 20785518 - 20785473
Alignment:
Q  171 gctaataatttgagaaaatcaaataattaagtgtaattatatgtgt 216  Q
    |||||||||||||| |||||| |||||| | |||||||||||||||    
T  20785518 gctaataatttgaggaaatcacataatttaatgtaattatatgtgt 20785473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 212
Target Start/End: Original strand, 7658470 - 7658510
Alignment:
Q  172 ctaataatttgagaaaatcaaataattaagtgtaattatat 212  Q
    |||||||||||||||||| | |||||| |||||||||||||    
T  7658470 ctaataatttgagaaaattacataattcagtgtaattatat 7658510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 214
Target Start/End: Complemental strand, 12559160 - 12559116
Alignment:
Q  170 tgctaataatttgagaaaatcaaataattaagtgtaattatatgt 214  Q
    |||||||||||||||||||| | |||||| |||||||| ||||||    
T  12559160 tgctaataatttgagaaaatgatataattcagtgtaatcatatgt 12559116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 212
Target Start/End: Original strand, 13203648 - 13203688
Alignment:
Q  172 ctaataatttgagaaaatcaaataattaagtgtaattatat 212  Q
    |||||||||||||||||| | |||||| |||||||||||||    
T  13203648 ctaataatttgagaaaattacataattcagtgtaattatat 13203688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 216
Target Start/End: Complemental strand, 15816181 - 15816137
Alignment:
Q  172 ctaataatttgagaaaatcaaataattaagtgtaattatatgtgt 216  Q
    |||||||||||| ||||||| |||||| |||||||||||| ||||    
T  15816181 ctaataatttgaaaaaatcacataatttagtgtaattataagtgt 15816137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 216
Target Start/End: Complemental strand, 20679447 - 20679403
Alignment:
Q  172 ctaataatttgagaaaatcaaataattaagtgtaattatatgtgt 216  Q
    |||||||||||||||||||| ||| || |||||||||||| ||||    
T  20679447 ctaataatttgagaaaatcacatagttcagtgtaattataagtgt 20679403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 214
Target Start/End: Original strand, 29776041 - 29776085
Alignment:
Q  170 tgctaataatttgagaaaatcaaataattaagtgtaattatatgt 214  Q
    ||||||||||||||||||||||  ||||| ||| |||||||||||    
T  29776041 tgctaataatttgagaaaatcacgtaattcagtataattatatgt 29776085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 47; Significance: 6e-18; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 171 - 225
Target Start/End: Original strand, 21616768 - 21616822
Alignment:
Q  171 gctaataatttgagaaaatcaaataattaagtgtaattatatgtgtacgtgtccg 225  Q
    ||||||||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  21616768 gctaataatttgagaaaatcacataattcagtgtaattatatgtgtacgtgtccg 21616822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 171 - 244
Target Start/End: Complemental strand, 42832329 - 42832256
Alignment:
Q  171 gctaataatttgagaaaatcaaataattaagtgtaattatatgtgtacgtgtccgacaccgagacacgcctaat 244  Q
    ||||||||||||||||||| | ||| || |||||||||||| ||||  ||||||||| ||| ||||||||||||    
T  42832329 gctaataatttgagaaaattacatatttcagtgtaattataagtgtcggtgtccgactccgggacacgcctaat 42832256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 173 - 216
Target Start/End: Complemental strand, 30527646 - 30527603
Alignment:
Q  173 taataatttgagaaaatcaaataattaagtgtaattatatgtgt 216  Q
    ||||||||||||||||||| |||||| |||||||||||||||||    
T  30527646 taataatttgagaaaatcatataatttagtgtaattatatgtgt 30527603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 173 - 216
Target Start/End: Original strand, 39279683 - 39279726
Alignment:
Q  173 taataatttgagaaaatcaaataattaagtgtaattatatgtgt 216  Q
    ||||||| |||||||||||||||||| |||||||||||||||||    
T  39279683 taataatatgagaaaatcaaataattcagtgtaattatatgtgt 39279726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 171 - 229
Target Start/End: Complemental strand, 34691858 - 34691800
Alignment:
Q  171 gctaataatttgagaaaatcaaataattaagtgtaattatatgtgtacgtgtccgacac 229  Q
    ||||||||||||| ||||||| |||||| |||||||||||||||||  ||||| |||||    
T  34691858 gctaataatttgataaaatcatataattcagtgtaattatatgtgtcggtgtcggacac 34691800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 171 - 229
Target Start/End: Complemental strand, 34714270 - 34714212
Alignment:
Q  171 gctaataatttgagaaaatcaaataattaagtgtaattatatgtgtacgtgtccgacac 229  Q
    ||||||||||||| ||||||| |||||| |||||||||||||||||  ||||| |||||    
T  34714270 gctaataatttgataaaatcatataattcagtgtaattatatgtgtcggtgtcggacac 34714212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 229
Target Start/End: Original strand, 5367199 - 5367256
Alignment:
Q  172 ctaataatttgagaaaatcaaataattaagtgtaattatatgtgtacgtgtccgacac 229  Q
    ||||||||||||| |||||| |||||| |||||||||||||||||  ||||| |||||    
T  5367199 ctaataatttgaggaaatcacataattcagtgtaattatatgtgtcggtgtcggacac 5367256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 171 - 216
Target Start/End: Original strand, 23718032 - 23718077
Alignment:
Q  171 gctaataatttgagaaaatcaaataattaagtgtaattatatgtgt 216  Q
    ||||||||||||||||| ||| |||||| |||||||||||||||||    
T  23718032 gctaataatttgagaaagtcacataattcagtgtaattatatgtgt 23718077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 171 - 216
Target Start/End: Original strand, 24105704 - 24105749
Alignment:
Q  171 gctaataatttgagaaaatcaaataattaagtgtaattatatgtgt 216  Q
    ||||||||||||||||| ||| |||||| |||||||||||||||||    
T  24105704 gctaataatttgagaaagtcacataattcagtgtaattatatgtgt 24105749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 171 - 216
Target Start/End: Complemental strand, 37411297 - 37411252
Alignment:
Q  171 gctaataatttgagaaaatcaaataattaagtgtaattatatgtgt 216  Q
    ||||||||||||||||||||| |||||| ||||| |||||||||||    
T  37411297 gctaataatttgagaaaatcacataattcagtgtgattatatgtgt 37411252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 171 - 216
Target Start/End: Original strand, 44860326 - 44860371
Alignment:
Q  171 gctaataatttgagaaaatcaaataattaagtgtaattatatgtgt 216  Q
    ||||||||||||||||||||  |||||| |||||||||||||||||    
T  44860326 gctaataatttgagaaaatcgcataattcagtgtaattatatgtgt 44860371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 170 - 210
Target Start/End: Complemental strand, 21782872 - 21782832
Alignment:
Q  170 tgctaataatttgagaaaatcaaataattaagtgtaattat 210  Q
    |||||||||||||||||||||| |||||| |||||||||||    
T  21782872 tgctaataatttgagaaaatcacataattcagtgtaattat 21782832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 173 - 216
Target Start/End: Original strand, 2415325 - 2415368
Alignment:
Q  173 taataatttgagaaaatcaaataattaagtgtaattatatgtgt 216  Q
    ||||||||||||||||| | |||||||||||||| |||||||||    
T  2415325 taataatttgagaaaattatataattaagtgtaactatatgtgt 2415368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 215
Target Start/End: Complemental strand, 2665940 - 2665897
Alignment:
Q  172 ctaataatttgagaaaatcaaataattaagtgtaattatatgtg 215  Q
    |||||||||| ||||||||| |||||| ||||||||||||||||    
T  2665940 ctaataattttagaaaatcacataatttagtgtaattatatgtg 2665897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 171 - 214
Target Start/End: Original strand, 28677915 - 28677958
Alignment:
Q  171 gctaataatttgagaaaatcaaataattaagtgtaattatatgt 214  Q
    ||||||||||||| ||||||| |||||| |||||||||||||||    
T  28677915 gctaataatttgaaaaaatcacataattcagtgtaattatatgt 28677958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 173 - 216
Target Start/End: Original strand, 35449521 - 35449564
Alignment:
Q  173 taataatttgagaaaatcaaataattaagtgtaattatatgtgt 216  Q
    ||||||||||||||||||| | |||| |||||||||||||||||    
T  35449521 taataatttgagaaaatcacagaattcagtgtaattatatgtgt 35449564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 244
Target Start/End: Original strand, 25846748 - 25846817
Alignment:
Q  172 ctaataatttgagaaaatcaaataattaagtgtaattatatgtgtacgtgtccgacaccgagacacgcctaat 244  Q
    |||||||||||||||||||| || ||| ||||||||||||   | |||||||| |||||  ||||||||||||    
T  25846748 ctaataatttgagaaaatcacatgattcagtgtaattata---ggacgtgtccaacaccaggacacgcctaat 25846817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 171 - 216
Target Start/End: Original strand, 18276527 - 18276572
Alignment:
Q  171 gctaataatttgagaaaatcaaataattaagtgtaattatatgtgt 216  Q
    |||||||||||||||||||||  ||||| ||||||||||| |||||    
T  18276527 gctaataatttgagaaaatcacttaattcagtgtaattatgtgtgt 18276572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 171 - 216
Target Start/End: Complemental strand, 18889644 - 18889599
Alignment:
Q  171 gctaataatttgagaaaatcaaataattaagtgtaattatatgtgt 216  Q
    |||||||| |||||||||||| |||||| |||||||| ||||||||    
T  18889644 gctaataaattgagaaaatcacataattcagtgtaatcatatgtgt 18889599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 171 - 216
Target Start/End: Complemental strand, 27286345 - 27286300
Alignment:
Q  171 gctaataatttgagaaaatcaaataattaagtgtaattatatgtgt 216  Q
    ||||||||||||| || |||| ||||||||||||||||||| ||||    
T  27286345 gctaataatttgataagatcacataattaagtgtaattataggtgt 27286300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 171 - 216
Target Start/End: Original strand, 31808083 - 31808128
Alignment:
Q  171 gctaataatttgagaaaatcaaataattaagtgtaattatatgtgt 216  Q
    ||||||||||| | ||||||| |||||| |||||||||||||||||    
T  31808083 gctaataatttaacaaaatcacataattcagtgtaattatatgtgt 31808128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 214
Target Start/End: Complemental strand, 32199191 - 32199150
Alignment:
Q  173 taataatttgagaaaatcaaataattaagtgtaattatatgt 214  Q
    ||||||||||| ||||||| |||||||||| |||||||||||    
T  32199191 taataatttgataaaatcacataattaagtataattatatgt 32199150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 214
Target Start/End: Original strand, 36281693 - 36281734
Alignment:
Q  173 taataatttgagaaaatcaaataattaagtgtaattatatgt 214  Q
    ||||||||||||||||||| |||||| |||||||| ||||||    
T  36281693 taataatttgagaaaatcacataatttagtgtaatcatatgt 36281734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 44; Significance: 4e-16; HSPs: 27)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 173 - 244
Target Start/End: Complemental strand, 22440651 - 22440581
Alignment:
Q  173 taataatttgagaaaatcaaataattaagtgtaattatatgtgtacgtgtccgacaccgagacacgcctaat 244  Q
    ||||||||||||||||||| |||||| |||||||||||||||| |||||||||||||   ||||||||||||    
T  22440651 taataatttgagaaaatcacataattcagtgtaattatatgtg-acgtgtccgacactaggacacgcctaat 22440581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 173 - 216
Target Start/End: Complemental strand, 5775409 - 5775366
Alignment:
Q  173 taataatttgagaaaatcaaataattaagtgtaattatatgtgt 216  Q
    ||||||||||||||||||| ||||||||||||||||||||||||    
T  5775409 taataatttgagaaaatcacataattaagtgtaattatatgtgt 5775366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 172 - 222
Target Start/End: Original strand, 36635331 - 36635381
Alignment:
Q  172 ctaataatttgagaaaatcaaataattaagtgtaattatatgtgtacgtgt 222  Q
    |||||||||||||||||||| |||||| ||||||||||||||||| |||||    
T  36635331 ctaataatttgagaaaatcacataattcagtgtaattatatgtgttcgtgt 36635381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 162 - 216
Target Start/End: Complemental strand, 999410 - 999356
Alignment:
Q  162 atcgatattgctaataatttgagaaaatcaaataattaagtgtaattatatgtgt 216  Q
    ||||| || |||||||||||||| |||||| |||||| |||||||||||||||||    
T  999410 atcgacatcgctaataatttgagtaaatcatataatttagtgtaattatatgtgt 999356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 170 - 216
Target Start/End: Complemental strand, 26504353 - 26504307
Alignment:
Q  170 tgctaataatttgagaaaatcaaataattaagtgtaattatatgtgt 216  Q
    |||||||||||| ||||||||||||| || |||||||||||||||||    
T  26504353 tgctaataatttaagaaaatcaaatagttcagtgtaattatatgtgt 26504307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 173 - 214
Target Start/End: Original strand, 903930 - 903971
Alignment:
Q  173 taataatttgagaaaatcaaataattaagtgtaattatatgt 214  Q
    ||||||||||||||||||| |||||| |||||||||||||||    
T  903930 taataatttgagaaaatcacataattcagtgtaattatatgt 903971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 168 - 225
Target Start/End: Complemental strand, 9299110 - 9299054
Alignment:
Q  168 attgctaataatttgagaaaatcaaataattaagtgtaattatatgtgtacgtgtccg 225  Q
    |||||||||||||||||||||| | ||| ||||||||||||||||||||  |||||||    
T  9299110 attgctaataatttgagaaaataatata-ttaagtgtaattatatgtgtcagtgtccg 9299054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 163 - 216
Target Start/End: Complemental strand, 18576098 - 18576045
Alignment:
Q  163 tcgatattgctaataatttgagaaaatcaaataattaagtgtaattatatgtgt 216  Q
    |||||| |||| ||||||||||||||||| ||||||  ||||||||||||||||    
T  18576098 tcgatactgctgataatttgagaaaatcacataattcggtgtaattatatgtgt 18576045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 171 - 216
Target Start/End: Original strand, 40613456 - 40613501
Alignment:
Q  171 gctaataatttgagaaaatcaaataattaagtgtaattatatgtgt 216  Q
    ||||||| ||||||||||||| |||||| |||||||||||||||||    
T  40613456 gctaatattttgagaaaatcacataattcagtgtaattatatgtgt 40613501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 171 - 211
Target Start/End: Complemental strand, 8423771 - 8423731
Alignment:
Q  171 gctaataatttgagaaaatcaaataattaagtgtaattata 211  Q
    ||||||||||||||||||||| |||||| ||||||||||||    
T  8423771 gctaataatttgagaaaatcacataattcagtgtaattata 8423731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 180 - 244
Target Start/End: Complemental strand, 10499314 - 10499251
Alignment:
Q  180 ttgagaaaatcaaataattaagtgtaattatatgtgtacgtgtccgacaccgagacacgcctaat 244  Q
    |||||||||||| |||||| |||||||||||||||||  ||||| ||| |||| |||||||||||    
T  10499314 ttgagaaaatcacataatttagtgtaattatatgtgtcagtgtcggac-ccgacacacgcctaat 10499251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 170 - 210
Target Start/End: Original strand, 56257938 - 56257978
Alignment:
Q  170 tgctaataatttgagaaaatcaaataattaagtgtaattat 210  Q
    |||||||||||||||||||||| |||||| |||||||||||    
T  56257938 tgctaataatttgagaaaatcatataattcagtgtaattat 56257978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 171 - 230
Target Start/End: Original strand, 33950142 - 33950201
Alignment:
Q  171 gctaataatttgagaaaatcaaataattaagtgtaattatatgtgtacgtgtccgacacc 230  Q
    ||||||||||||||||||||| |||||| | |||||| ||||||||  ||||| ||||||    
T  33950142 gctaataatttgagaaaatcacataatttaatgtaatcatatgtgtcggtgtcagacacc 33950201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 173 - 216
Target Start/End: Original strand, 40742599 - 40742642
Alignment:
Q  173 taataatttgagaaaatcaaataattaagtgtaattatatgtgt 216  Q
    ||||||||||||||||||| |||||  |||||||||||||||||    
T  40742599 taataatttgagaaaatcatataatctagtgtaattatatgtgt 40742642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 216
Target Start/End: Original strand, 13134455 - 13134501
Alignment:
Q  170 tgctaataatttgagaaaatcaaataattaagtgtaattatatgtgt 216  Q
    |||| ||||||| ||||||||| |||||| |||||||||||||||||    
T  13134455 tgcttataatttaagaaaatcacataatttagtgtaattatatgtgt 13134501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 216
Target Start/End: Original strand, 15029770 - 15029816
Alignment:
Q  170 tgctaataatttgagaaaatcaaataattaagtgtaattatatgtgt 216  Q
    |||||||||||||| || |||| |||||| |||||||||||||||||    
T  15029770 tgctaataatttgaaaatatcacataattcagtgtaattatatgtgt 15029816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 216
Target Start/End: Complemental strand, 15659814 - 15659768
Alignment:
Q  170 tgctaataatttgagaaaatcaaataattaagtgtaattatatgtgt 216  Q
    |||||||||||||||||||||  ||||||  ||||||||||||||||    
T  15659814 tgctaataatttgagaaaatctcataattcggtgtaattatatgtgt 15659768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 171 - 216
Target Start/End: Complemental strand, 3712562 - 3712517
Alignment:
Q  171 gctaataatttgagaaaatcaaataattaagtgtaattatatgtgt 216  Q
    |||||||||||||||||||||  ||||| | |||||||||||||||    
T  3712562 gctaataatttgagaaaatcatgtaattcaatgtaattatatgtgt 3712517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 213
Target Start/End: Complemental strand, 7214574 - 7214533
Alignment:
Q  172 ctaataatttgagaaaatcaaataattaagtgtaattatatg 213  Q
    |||||||||||||||||||| |||||| | ||||||||||||    
T  7214574 ctaataatttgagaaaatcacataatttaatgtaattatatg 7214533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 171 - 216
Target Start/End: Original strand, 16189715 - 16189760
Alignment:
Q  171 gctaataatttgagaaaatcaaataattaagtgtaattatatgtgt 216  Q
    ||||| ||||||||||||||| |||||| ||||||||||| |||||    
T  16189715 gctaaaaatttgagaaaatcacataattcagtgtaattatgtgtgt 16189760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 229
Target Start/End: Complemental strand, 54580075 - 54580018
Alignment:
Q  172 ctaataatttgagaaaatcaaataattaagtgtaattatatgtgtacgtgtccgacac 229  Q
    |||||||||||| ||||||| |||||| |||||||||||| ||||  ||||| |||||    
T  54580075 ctaataatttgaaaaaatcacataattcagtgtaattataagtgtcggtgtcggacac 54580018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 214
Target Start/End: Original strand, 9996849 - 9996889
Alignment:
Q  174 aataatttgagaaaatcaaataattaagtgtaattatatgt 214  Q
    |||||||||||||||||| |||||| ||| |||||||||||    
T  9996849 aataatttgagaaaatcacataattcagtataattatatgt 9996889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 223
Target Start/End: Complemental strand, 11596405 - 11596353
Alignment:
Q  171 gctaataatttgagaaaatcaaataattaagtgtaattatatgtgtacgtgtc 223  Q
    ||||||||||||| ||||||| |||||| |||||||||| | ||||| |||||    
T  11596405 gctaataatttgaaaaaatcacataattcagtgtaattacaagtgtaggtgtc 11596353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 211
Target Start/End: Original strand, 30838208 - 30838256
Alignment:
Q  163 tcgatattgctaataatttgagaaaatcaaataattaagtgtaattata 211  Q
    |||||| |||||||||||||| ||||| | |||||| ||||||||||||    
T  30838208 tcgatactgctaataatttgataaaattatataatttagtgtaattata 30838256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 214
Target Start/End: Complemental strand, 35952671 - 35952627
Alignment:
Q  170 tgctaataatttgagaaaatcaaataattaagtgtaattatatgt 214  Q
    |||||||||||||| ||||||| |||||| | |||||||||||||    
T  35952671 tgctaataatttgataaaatcatataattcaatgtaattatatgt 35952627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 212
Target Start/End: Original strand, 37698719 - 37698759
Alignment:
Q  172 ctaataatttgagaaaatcaaataattaagtgtaattatat 212  Q
    |||||||||||||||||| | |||||| |||||||||||||    
T  37698719 ctaataatttgagaaaattatataattcagtgtaattatat 37698759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 216
Target Start/End: Complemental strand, 44081637 - 44081585
Alignment:
Q  164 cgatattgctaataatttgagaaaatcaaataattaagtgtaattatatgtgt 216  Q
    |||||| | ||||||||||| ||||||| |||||| | |||||||||||||||    
T  44081637 cgatatcgttaataatttgaaaaaatcatataatttaatgtaattatatgtgt 44081585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 31)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 173 - 215
Target Start/End: Original strand, 16341504 - 16341546
Alignment:
Q  173 taataatttgagaaaatcaaataattaagtgtaattatatgtg 215  Q
    ||||||||||||||||||| |||||||||||||||||||||||    
T  16341504 taataatttgagaaaatcacataattaagtgtaattatatgtg 16341546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 175 - 216
Target Start/End: Original strand, 5548686 - 5548727
Alignment:
Q  175 ataatttgagaaaatcaaataattaagtgtaattatatgtgt 216  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  5548686 ataatttgagaaaatcaaataattcagtgtaattatatgtgt 5548727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 163 - 216
Target Start/End: Complemental strand, 7328752 - 7328699
Alignment:
Q  163 tcgatattgctaataatttgagaaaatcaaataattaagtgtaattatatgtgt 216  Q
    |||||| |||||||||||||||||||| | |||||| |||||||||||||||||    
T  7328752 tcgatactgctaataatttgagaaaataacataatttagtgtaattatatgtgt 7328699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 170 - 229
Target Start/End: Original strand, 3721098 - 3721157
Alignment:
Q  170 tgctaataatttgagaaaatcaaataattaagtgtaattatatgtgtacgtgtccgacac 229  Q
    |||||||||||||||||||||| |||||| ||| |||||||||||||  ||||| |||||    
T  3721098 tgctaataatttgagaaaatcacataatttagtataattatatgtgtcggtgtcggacac 3721157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 162 - 216
Target Start/End: Original strand, 17851428 - 17851482
Alignment:
Q  162 atcgatattgctaataatttgagaaaatcaaataattaagtgtaattatatgtgt 216  Q
    |||||||  ||||||||||| ||||||||| |||||| |||||||||||||||||    
T  17851428 atcgataccgctaataattttagaaaatcacataattcagtgtaattatatgtgt 17851482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 171 - 229
Target Start/End: Original strand, 20549797 - 20549855
Alignment:
Q  171 gctaataatttgagaaaatcaaataattaagtgtaattatatgtgtacgtgtccgacac 229  Q
    |||||||||||||||||||||  ||||| |||||||||||||||||  ||||| |||||    
T  20549797 gctaataatttgagaaaatcacgtaattcagtgtaattatatgtgtcggtgtcggacac 20549855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 171 - 229
Target Start/End: Complemental strand, 42720943 - 42720885
Alignment:
Q  171 gctaataatttgagaaaatcaaataattaagtgtaattatatgtgtacgtgtccgacac 229  Q
    ||||||||||||| ||||||| |||||||| |||||||||||||||  ||||| |||||    
T  42720943 gctaataatttgaaaaaatcacataattaaatgtaattatatgtgtcagtgtctgacac 42720885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 171 - 216
Target Start/End: Original strand, 32308126 - 32308171
Alignment:
Q  171 gctaataatttgagaaaatcaaataattaagtgtaattatatgtgt 216  Q
    ||||||||||||||||||||| |||||| ||||||||| |||||||    
T  32308126 gctaataatttgagaaaatcacataattcagtgtaattgtatgtgt 32308171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 165 - 229
Target Start/End: Original strand, 1401025 - 1401089
Alignment:
Q  165 gatattgctaataatttgagaaaatcaaataattaagtgtaattatatgtgtacgtgtccgacac 229  Q
    ||||| ||||||||||||||||| ||| |||||| |||||||||||| || |  |||||||||||    
T  1401025 gatatcgctaataatttgagaaactcacataattcagtgtaattataagtatcggtgtccgacac 1401089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 216
Target Start/End: Original strand, 22868049 - 22868093
Alignment:
Q  172 ctaataatttgagaaaatcaaataattaagtgtaattatatgtgt 216  Q
    |||||||| ||||||||||| |||||| |||||||||||||||||    
T  22868049 ctaataatatgagaaaatcacataattcagtgtaattatatgtgt 22868093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 171 - 210
Target Start/End: Original strand, 2424620 - 2424659
Alignment:
Q  171 gctaataatttgagaaaatcaaataattaagtgtaattat 210  Q
    ||||||||||||||||||||| |||||| |||||||||||    
T  2424620 gctaataatttgagaaaatcacataattcagtgtaattat 2424659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 173 - 216
Target Start/End: Complemental strand, 2425784 - 2425741
Alignment:
Q  173 taataatttgagaaaatcaaataattaagtgtaattatatgtgt 216  Q
    ||||||||||||||||||| ||||||||||| || |||||||||    
T  2425784 taataatttgagaaaatcacataattaagtggaactatatgtgt 2425741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 173 - 216
Target Start/End: Original strand, 5233637 - 5233680
Alignment:
Q  173 taataatttgagaaaatcaaataattaagtgtaattatatgtgt 216  Q
    ||||||||||||||||||| |||||  |||||||||||||||||    
T  5233637 taataatttgagaaaatcacataatctagtgtaattatatgtgt 5233680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 173 - 216
Target Start/End: Original strand, 15902830 - 15902873
Alignment:
Q  173 taataatttgagaaaatcaaataattaagtgtaattatatgtgt 216  Q
    ||||||||||| ||||||| |||||| |||||||||||||||||    
T  15902830 taataatttgataaaatcacataatttagtgtaattatatgtgt 15902873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 171 - 210
Target Start/End: Complemental strand, 29787422 - 29787383
Alignment:
Q  171 gctaataatttgagaaaatcaaataattaagtgtaattat 210  Q
    ||||||||||||||||||||| |||||| |||||||||||    
T  29787422 gctaataatttgagaaaatcacataattcagtgtaattat 29787383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 216
Target Start/End: Complemental strand, 22602756 - 22602718
Alignment:
Q  178 atttgagaaaatcaaataattaagtgtaattatatgtgt 216  Q
    |||||||||||||| |||||| |||||||||||||||||    
T  22602756 atttgagaaaatcacataattcagtgtaattatatgtgt 22602718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 213
Target Start/End: Complemental strand, 27093466 - 27093424
Alignment:
Q  171 gctaataatttgagaaaatcaaataattaagtgtaattatatg 213  Q
    ||||||||||| ||||||||| |||||| ||||||||||||||    
T  27093466 gctaataatttaagaaaatcacataatttagtgtaattatatg 27093424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 213
Target Start/End: Original strand, 27184835 - 27184877
Alignment:
Q  171 gctaataatttgagaaaatcaaataattaagtgtaattatatg 213  Q
    ||||||||||| ||||||||| |||||| ||||||||||||||    
T  27184835 gctaataatttaagaaaatcacataatttagtgtaattatatg 27184877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 171 - 216
Target Start/End: Original strand, 8160422 - 8160467
Alignment:
Q  171 gctaataatttgagaaaatcaaataattaagtgtaattatatgtgt 216  Q
    ||||||||||| ||||||| | |||||| |||||||||||||||||    
T  8160422 gctaataatttaagaaaattacataatttagtgtaattatatgtgt 8160467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 175 - 216
Target Start/End: Original strand, 9482944 - 9482985
Alignment:
Q  175 ataatttgagaaaatcaaataattaagtgtaattatatgtgt 216  Q
    ||||||||||||||||| | |||| |||||||||||||||||    
T  9482944 ataatttgagaaaatcacacaattcagtgtaattatatgtgt 9482985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 230
Target Start/End: Original strand, 12278843 - 12278899
Alignment:
Q  173 taataatttgagaaaatcaaataattaagtgtaattatatgtgtacgtgtccgacacc 230  Q
    ||||||||| ||||||| | |||||| ||||||||||||||||| |||||| ||||||    
T  12278843 taataatttaagaaaatgacataattcagtgtaattatatgtgt-cgtgtcggacacc 12278899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 171 - 216
Target Start/End: Original strand, 19206056 - 19206101
Alignment:
Q  171 gctaataatttgagaaaatcaaataattaagtgtaattatatgtgt 216  Q
    ||||||||||||||||||||| |||||| | | |||||||||||||    
T  19206056 gctaataatttgagaaaatcacataattcattataattatatgtgt 19206101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 171 - 216
Target Start/End: Original strand, 19992007 - 19992052
Alignment:
Q  171 gctaataatttgagaaaatcaaataattaagtgtaattatatgtgt 216  Q
    ||||||||||||||||||||| ||| || |||||||||||| ||||    
T  19992007 gctaataatttgagaaaatcacatatttcagtgtaattataagtgt 19992052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 171 - 244
Target Start/End: Original strand, 28155576 - 28155649
Alignment:
Q  171 gctaataatttgagaaaatcaaataattaagtgtaattatatgtgtacgtgtccgacaccgagacacgcctaat 244  Q
    ||||||||||||||||||| | ||||||  ||||||||| | ||||  ||||| ||||||  ||||||||||||    
T  28155576 gctaataatttgagaaaattacataattcggtgtaattacaagtgtcggtgtcggacaccaggacacgcctaat 28155649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 168 - 209
Target Start/End: Original strand, 30813815 - 30813856
Alignment:
Q  168 attgctaataatttgagaaaatcaaataattaagtgtaatta 209  Q
    |||||||||||||||||||||| | |||||| ||||||||||    
T  30813815 attgctaataatttgagaaaattacataattcagtgtaatta 30813856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 216
Target Start/End: Original strand, 5835254 - 5835298
Alignment:
Q  172 ctaataatttgagaaaatcaaataattaagtgtaattatatgtgt 216  Q
    |||||| ||||||||||| | |||||| |||||||||||||||||    
T  5835254 ctaatagtttgagaaaataacataattcagtgtaattatatgtgt 5835298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 216
Target Start/End: Original strand, 5956280 - 5956324
Alignment:
Q  172 ctaataatttgagaaaatcaaataattaagtgtaattatatgtgt 216  Q
    |||||||||| | |||||||||||||| | |||||||||||||||    
T  5956280 ctaataatttaaaaaaatcaaataatttaatgtaattatatgtgt 5956324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 216
Target Start/End: Complemental strand, 6630964 - 6630920
Alignment:
Q  172 ctaataatttgagaaaatcaaataattaagtgtaattatatgtgt 216  Q
    |||||||||||||||| |||  ||||| |||||||||||||||||    
T  6630964 ctaataatttgagaaagtcacttaattcagtgtaattatatgtgt 6630920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 210
Target Start/End: Original strand, 12289119 - 12289159
Alignment:
Q  170 tgctaataatttgagaaaatcaaataattaagtgtaattat 210  Q
    |||||||||||||||||||||| |||||| |||| ||||||    
T  12289119 tgctaataatttgagaaaatcacataattcagtggaattat 12289159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 216
Target Start/End: Original strand, 17307904 - 17307944
Alignment:
Q  176 taatttgagaaaatcaaataattaagtgtaattatatgtgt 216  Q
    |||||||||||||| | |||||| |||||||||||||||||    
T  17307904 taatttgagaaaataacataattcagtgtaattatatgtgt 17307944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 229
Target Start/End: Original strand, 38143231 - 38143287
Alignment:
Q  173 taataatttgagaaaatcaaataattaagtgtaattatatgtgtacgtgtccgacac 229  Q
    ||||||||||| ||||||| |||||| | |||||||||||||||  ||||| |||||    
T  38143231 taataatttgaaaaaatcacataatttaatgtaattatatgtgttggtgtcagacac 38143287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 23)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 170 - 216
Target Start/End: Original strand, 39205885 - 39205931
Alignment:
Q  170 tgctaataatttgagaaaatcaaataattaagtgtaattatatgtgt 216  Q
    |||||||||||||||||||||| ||||||| ||||||||||||||||    
T  39205885 tgctaataatttgagaaaatcatataattaggtgtaattatatgtgt 39205931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 171 - 216
Target Start/End: Complemental strand, 6471942 - 6471897
Alignment:
Q  171 gctaataatttgagaaaatcaaataattaagtgtaattatatgtgt 216  Q
    ||||||||||||||||||||| |||||| |||||||||||||||||    
T  6471942 gctaataatttgagaaaatcacataattcagtgtaattatatgtgt 6471897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 170 - 216
Target Start/End: Complemental strand, 16203849 - 16203803
Alignment:
Q  170 tgctaataatttgagaaaatcaaataattaagtgtaattatatgtgt 216  Q
    |||||||||||||||||||||  |||||| |||||||||||||||||    
T  16203849 tgctaataatttgagaaaatctcataatttagtgtaattatatgtgt 16203803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 170 - 216
Target Start/End: Complemental strand, 23012462 - 23012416
Alignment:
Q  170 tgctaataatttgagaaaatcaaataattaagtgtaattatatgtgt 216  Q
    |||||||||||||||||||||| |||||| | |||||||||||||||    
T  23012462 tgctaataatttgagaaaatcatataatttaatgtaattatatgtgt 23012416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 171 - 229
Target Start/End: Complemental strand, 30502441 - 30502383
Alignment:
Q  171 gctaataatttgagaaaatcaaataattaagtgtaattatatgtgtacgtgtccgacac 229  Q
    |||||||||||||||||||||  ||||| |||||||||||||||||  ||||| |||||    
T  30502441 gctaataatttgagaaaatcacttaattcagtgtaattatatgtgtcggtgtcggacac 30502383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 171 - 229
Target Start/End: Complemental strand, 30542784 - 30542726
Alignment:
Q  171 gctaataatttgagaaaatcaaataattaagtgtaattatatgtgtacgtgtccgacac 229  Q
    |||||||||||||||||||||  ||||| |||||||||||||||||  ||||| |||||    
T  30542784 gctaataatttgagaaaatcacttaattcagtgtaattatatgtgtcggtgtcggacac 30542726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 170 - 216
Target Start/End: Complemental strand, 41091311 - 41091265
Alignment:
Q  170 tgctaataatttgagaaaatcaaataattaagtgtaattatatgtgt 216  Q
    ||||||| |||||||||||||| |||||| |||||||||||||||||    
T  41091311 tgctaatgatttgagaaaatcacataattcagtgtaattatatgtgt 41091265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 171 - 216
Target Start/End: Original strand, 3966509 - 3966554
Alignment:
Q  171 gctaataatttgagaaaatcaaataattaagtgtaattatatgtgt 216  Q
    ||||||||||||||||||||| | |||| |||||||||||||||||    
T  3966509 gctaataatttgagaaaatcacacaattcagtgtaattatatgtgt 3966554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 171 - 212
Target Start/End: Original strand, 12927660 - 12927701
Alignment:
Q  171 gctaataatttgagaaaatcaaataattaagtgtaattatat 212  Q
    ||||||||||||||||||||| |||||| |||||||||||||    
T  12927660 gctaataatttgagaaaatcatataatttagtgtaattatat 12927701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 171 - 216
Target Start/End: Original strand, 27144469 - 27144514
Alignment:
Q  171 gctaataatttgagaaaatcaaataattaagtgtaattatatgtgt 216  Q
    |||||||||||||| |||||| |||||| |||||||||||||||||    
T  27144469 gctaataatttgaggaaatcacataatttagtgtaattatatgtgt 27144514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 213
Target Start/End: Original strand, 35017044 - 35017085
Alignment:
Q  172 ctaataatttgagaaaatcaaataattaagtgtaattatatg 213  Q
    |||||||||||||||||||| |||||| ||||||||||||||    
T  35017044 ctaataatttgagaaaatcacataatttagtgtaattatatg 35017085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 171 - 216
Target Start/End: Original strand, 36838549 - 36838594
Alignment:
Q  171 gctaataatttgagaaaatcaaataattaagtgtaattatatgtgt 216  Q
    ||||||||||||||||||| | |||||| |||||||||||||||||    
T  36838549 gctaataatttgagaaaattacataatttagtgtaattatatgtgt 36838594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 216
Target Start/End: Complemental strand, 3751982 - 3751938
Alignment:
Q  172 ctaataatttgagaaaatcaaataattaagtgtaattatatgtgt 216  Q
    |||||||||||||||||||| |||| ||||| |||||||||||||    
T  3751982 ctaataatttgagaaaatcacataactaagtataattatatgtgt 3751938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 174 - 214
Target Start/End: Original strand, 26312778 - 26312818
Alignment:
Q  174 aataatttgagaaaatcaaataattaagtgtaattatatgt 214  Q
    ||||||||||||||||||| ||||| |||||||||||||||    
T  26312778 aataatttgagaaaatcaattaattcagtgtaattatatgt 26312818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 173 - 229
Target Start/End: Complemental strand, 28588725 - 28588669
Alignment:
Q  173 taataatttgagaaaatcaaataattaagtgtaattatatgtgtacgtgtccgacac 229  Q
    ||||||||||||||||||| |||||| |||||||||||| ||||  ||||| |||||    
T  28588725 taataatttgagaaaatcacataattcagtgtaattataggtgtcggtgtcggacac 28588669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 176 - 215
Target Start/End: Complemental strand, 24273078 - 24273039
Alignment:
Q  176 taatttgagaaaatcaaataattaagtgtaattatatgtg 215  Q
    |||||||||||||||| |||||| ||||||||||||||||    
T  24273078 taatttgagaaaatcacataattcagtgtaattatatgtg 24273039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 176 - 215
Target Start/End: Original strand, 24389136 - 24389175
Alignment:
Q  176 taatttgagaaaatcaaataattaagtgtaattatatgtg 215  Q
    |||||||||||||||| |||||| ||||||||||||||||    
T  24389136 taatttgagaaaatcacataattcagtgtaattatatgtg 24389175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 216
Target Start/End: Complemental strand, 18421895 - 18421849
Alignment:
Q  170 tgctaataatttgagaaaatcaaataattaagtgtaattatatgtgt 216  Q
    |||| ||||||||||||||||| |||||  |||||||||||||||||    
T  18421895 tgctgataatttgagaaaatcacataatccagtgtaattatatgtgt 18421849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 171 - 216
Target Start/End: Original strand, 11685945 - 11685990
Alignment:
Q  171 gctaataatttgagaaaatcaaataattaagtgtaattatatgtgt 216  Q
    ||||||||||||||||| ||  |||||| |||||||||||||||||    
T  11685945 gctaataatttgagaaagtcgcataatttagtgtaattatatgtgt 11685990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 175 - 216
Target Start/End: Original strand, 14873527 - 14873568
Alignment:
Q  175 ataatttgagaaaatcaaataattaagtgtaattatatgtgt 216  Q
    |||||||||||||| || |||||| |||||||||||||||||    
T  14873527 ataatttgagaaaagcacataatttagtgtaattatatgtgt 14873568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 171 - 212
Target Start/End: Complemental strand, 17593775 - 17593734
Alignment:
Q  171 gctaataatttgagaaaatcaaataattaagtgtaattatat 212  Q
    |||||||||||||||||||||  ||||| |||||||||||||    
T  17593775 gctaataatttgagaaaatcacgtaattcagtgtaattatat 17593734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 171 - 216
Target Start/End: Original strand, 34879356 - 34879401
Alignment:
Q  171 gctaataatttgagaaaatcaaataattaagtgtaattatatgtgt 216  Q
    ||||| ||||||||||||||| |||||| |||||||| ||||||||    
T  34879356 gctaaaaatttgagaaaatcatataattcagtgtaataatatgtgt 34879401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 232
Target Start/End: Original strand, 15086482 - 15086538
Alignment:
Q  176 taatttgagaaaatcaaataattaagtgtaattatatgtgtacgtgtccgacaccga 232  Q
    |||||||||||||||| |||||  | |||||||||||||||  ||||| ||||||||    
T  15086482 taatttgagaaaatcatataatgtaatgtaattatatgtgtcggtgtctgacaccga 15086538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 30)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 170 - 216
Target Start/End: Complemental strand, 11313854 - 11313808
Alignment:
Q  170 tgctaataatttgagaaaatcaaataattaagtgtaattatatgtgt 216  Q
    |||||||||||||||||||||| |||||| |||||||||||||||||    
T  11313854 tgctaataatttgagaaaatcacataatttagtgtaattatatgtgt 11313808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 172 - 214
Target Start/End: Complemental strand, 48353783 - 48353741
Alignment:
Q  172 ctaataatttgagaaaatcaaataattaagtgtaattatatgt 214  Q
    ||||||||||||||||||||||||||||| |||||||||||||    
T  48353783 ctaataatttgagaaaatcaaataattaattgtaattatatgt 48353741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 171 - 229
Target Start/End: Complemental strand, 49505207 - 49505149
Alignment:
Q  171 gctaataatttgagaaaatcaaataattaagtgtaattatatgtgtacgtgtccgacac 229  Q
    ||||||||||||||||||||| |||||| |||||||||||||||||  ||||| |||||    
T  49505207 gctaataatttgagaaaatcacataatttagtgtaattatatgtgtcagtgtcggacac 49505149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 173 - 228
Target Start/End: Original strand, 4201404 - 4201459
Alignment:
Q  173 taataatttgagaaaatcaaataattaagtgtaattatatgtgtacgtgtccgaca 228  Q
    ||||||||||| ||||||| |||||||||||||||||||| |||  ||||||||||    
T  4201404 taataatttgaaaaaatcacataattaagtgtaattatatatgttggtgtccgaca 4201459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 173 - 216
Target Start/End: Complemental strand, 32804591 - 32804548
Alignment:
Q  173 taataatttgagaaaatcaaataattaagtgtaattatatgtgt 216  Q
    ||||||||||||||||||| |||||| |||||||||||||||||    
T  32804591 taataatttgagaaaatcacataatttagtgtaattatatgtgt 32804548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 171 - 229
Target Start/End: Original strand, 7928456 - 7928514
Alignment:
Q  171 gctaataatttgagaaaatcaaataattaagtgtaattatatgtgtacgtgtccgacac 229  Q
    ||||||||||||| ||||||| |||||| |||||||||||||||||  ||||| |||||    
T  7928456 gctaataatttgaaaaaatcacataattcagtgtaattatatgtgtcggtgtcggacac 7928514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 171 - 229
Target Start/End: Original strand, 8383263 - 8383321
Alignment:
Q  171 gctaataatttgagaaaatcaaataattaagtgtaattatatgtgtacgtgtccgacac 229  Q
    ||||||||||||||||||||| |||||| |||||||||||| ||||  ||||| |||||    
T  8383263 gctaataatttgagaaaatcatataattcagtgtaattataagtgtcggtgtcggacac 8383321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 170 - 216
Target Start/End: Original strand, 10455795 - 10455841
Alignment:
Q  170 tgctaataatttgagaaaatcaaataattaagtgtaattatatgtgt 216  Q
    |||||||||| ||||||||||| |||| |||||||||||||||||||    
T  10455795 tgctaataatatgagaaaatcatataactaagtgtaattatatgtgt 10455841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 168 - 210
Target Start/End: Original strand, 11251981 - 11252023
Alignment:
Q  168 attgctaataatttgagaaaatcaaataattaagtgtaattat 210  Q
    |||||||||||||||||||||||| |||||| |||||||||||    
T  11251981 attgctaataatttgagaaaatcacataattcagtgtaattat 11252023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 173 - 222
Target Start/End: Original strand, 2731820 - 2731869
Alignment:
Q  173 taataatttgagaaaatcaaataattaagtgtaattatatgtgtacgtgt 222  Q
    ||||| ||| ||||||||| ||||||||||||||||||||||||| ||||    
T  2731820 taatactttaagaaaatcacataattaagtgtaattatatgtgtatgtgt 2731869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 171 - 216
Target Start/End: Complemental strand, 8039888 - 8039843
Alignment:
Q  171 gctaataatttgagaaaatcaaataattaagtgtaattatatgtgt 216  Q
    ||||||||||||||||||| | |||||| |||||||||||||||||    
T  8039888 gctaataatttgagaaaattatataattcagtgtaattatatgtgt 8039843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 170 - 210
Target Start/End: Complemental strand, 27277892 - 27277852
Alignment:
Q  170 tgctaataatttgagaaaatcaaataattaagtgtaattat 210  Q
    |||||||||||||||||||||| |||||| |||||||||||    
T  27277892 tgctaataatttgagaaaatcacataatttagtgtaattat 27277852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 216
Target Start/End: Original strand, 29508451 - 29508495
Alignment:
Q  172 ctaataatttgagaaaatcaaataattaagtgtaattatatgtgt 216  Q
    |||||||||||| ||||||| |||||| |||||||||||||||||    
T  29508451 ctaataatttgaaaaaatcatataattcagtgtaattatatgtgt 29508495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 213
Target Start/End: Original strand, 9624646 - 9624689
Alignment:
Q  170 tgctaataatttgagaaaatcaaataattaagtgtaattatatg 213  Q
    |||||||||||||||||||||| |||||| | ||||||||||||    
T  9624646 tgctaataatttgagaaaatcacataattcaatgtaattatatg 9624689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 173 - 216
Target Start/End: Complemental strand, 16192801 - 16192758
Alignment:
Q  173 taataatttgagaaaatcaaataattaagtgtaattatatgtgt 216  Q
    ||||||||||||||||| | |||||| |||||||||||||||||    
T  16192801 taataatttgagaaaataacataattcagtgtaattatatgtgt 16192758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 229
Target Start/End: Complemental strand, 8789599 - 8789545
Alignment:
Q  175 ataatttgagaaaatcaaataattaagtgtaattatatgtgtacgtgtccgacac 229  Q
    ||||||||||||||||| ||||||  ||||||||||||||||  ||||| |||||    
T  8789599 ataatttgagaaaatcacataattccgtgtaattatatgtgtcggtgtcggacac 8789545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 214
Target Start/End: Original strand, 12704014 - 12704056
Alignment:
Q  172 ctaataatttgagaaaatcaaataattaagtgtaattatatgt 214  Q
    ||||||||||||||||| || |||||| |||||||||||||||    
T  12704014 ctaataatttgagaaaagcacataattcagtgtaattatatgt 12704056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 241
Target Start/End: Original strand, 13414487 - 13414545
Alignment:
Q  183 agaaaatcaaataattaagtgtaattatatgtgtacgtgtccgacaccgagacacgcct 241  Q
    |||||||||||||||| | |||||||||||||||  ||||| ||||| | |||||||||    
T  13414487 agaaaatcaaataattcaatgtaattatatgtgtcggtgtcggacacagggacacgcct 13414545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 242
Target Start/End: Complemental strand, 10268537 - 10268468
Alignment:
Q  173 taataatttgagaaaatcaaataattaagtgtaattatatgtgtacgtgtccgacaccgagacacgccta 242  Q
    ||||||||||| ||||||| |||||| |||||||||| | ||||  ||||| |||||||  |||||||||    
T  10268537 taataatttgaaaaaatcacataatttagtgtaattacaagtgtcagtgtcagacaccggaacacgccta 10268468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 171 - 212
Target Start/End: Complemental strand, 10690315 - 10690274
Alignment:
Q  171 gctaataatttgagaaaatcaaataattaagtgtaattatat 212  Q
    ||||||||| ||||||||||| |||||| |||||||||||||    
T  10690315 gctaataatctgagaaaatcacataattcagtgtaattatat 10690274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 213
Target Start/End: Complemental strand, 11493413 - 11493372
Alignment:
Q  172 ctaataatttgagaaaatcaaataattaagtgtaattatatg 213  Q
    |||||||| ||||||||||| |||||| ||||||||||||||    
T  11493413 ctaataatgtgagaaaatcacataattcagtgtaattatatg 11493372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 171 - 216
Target Start/End: Original strand, 11665950 - 11665995
Alignment:
Q  171 gctaataatttgagaaaatcaaataattaagtgtaattatatgtgt 216  Q
    ||||||||||||| ||||||| | |||| |||||||||||||||||    
T  11665950 gctaataatttgataaaatcacacaatttagtgtaattatatgtgt 11665995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 214
Target Start/End: Original strand, 18180547 - 18180588
Alignment:
Q  173 taataatttgagaaaatcaaataattaagtgtaattatatgt 214  Q
    ||||||||||||||||| |||||||||| |||||||| ||||    
T  18180547 taataatttgagaaaatgaaataattaaatgtaattacatgt 18180588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 171 - 216
Target Start/End: Complemental strand, 25948940 - 25948895
Alignment:
Q  171 gctaataatttgagaaaatcaaataattaagtgtaattatatgtgt 216  Q
    ||||||||||||| ||||||| |||||| |||||||||||| ||||    
T  25948940 gctaataatttgaaaaaatcacataattcagtgtaattataagtgt 25948895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 171 - 216
Target Start/End: Complemental strand, 34307833 - 34307788
Alignment:
Q  171 gctaataatttgagaaaatcaaataattaagtgtaattatatgtgt 216  Q
    ||||||||||||||||||||| ||| || |||||||||||| ||||    
T  34307833 gctaataatttgagaaaatcacatatttcagtgtaattataagtgt 34307788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 216
Target Start/End: Complemental strand, 15314924 - 15314884
Alignment:
Q  176 taatttgagaaaatcaaataattaagtgtaattatatgtgt 216  Q
    |||||||| ||||||| |||||| |||||||||||||||||    
T  15314924 taatttgaaaaaatcacataatttagtgtaattatatgtgt 15314884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 216
Target Start/End: Complemental strand, 17005671 - 17005627
Alignment:
Q  172 ctaataatttgagaaaatcaaataattaagtgtaattatatgtgt 216  Q
    |||||||||||| ||||||| |||||| |||||||||||| ||||    
T  17005671 ctaataatttgataaaatcatataattcagtgtaattataagtgt 17005627  T

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Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 229
Target Start/End: Original strand, 20691327 - 20691383
Alignment:
Q  173 taataatttgagaaaatcaaataattaagtgtaattatatgtgtacgtgtccgacac 229  Q
    ||||||||||||||||| | |||||| |||||||| ||||||||  ||||| |||||    
T  20691327 taataatttgagaaaatgacataattcagtgtaatcatatgtgtcggtgtcagacac 20691383  T

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Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 229
Target Start/End: Original strand, 25093510 - 25093566
Alignment:
Q  173 taataatttgagaaaatcaaataattaagtgtaattatatgtgtacgtgtccgacac 229  Q
    |||| |||||||||||||| | |||| |||||||||||||||||  ||||| |||||    
T  25093510 taatgatttgagaaaatcacacaattcagtgtaattatatgtgtcggtgtcggacac 25093566  T

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Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 212
Target Start/End: Complemental strand, 29112332 - 29112292
Alignment:
Q  172 ctaataatttgagaaaatcaaataattaagtgtaattatat 212  Q
    ||||| |||||||||||||| |||||| |||||||||||||    
T  29112332 ctaattatttgagaaaatcatataattcagtgtaattatat 29112292  T

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Target: scaffold0020 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 170 - 244
Target Start/End: Complemental strand, 135366 - 135287
Alignment:
Q  170 tgctaataatttgagaaaatcaaataattaagtgtaattatatgtgt-----acgtgtccgacaccgagacacgcctaat 244  Q
    |||||||||||||||||||||| ||||||  ||||||||||||||||      |||||||||||||  ||||||||||||    
T  135366 tgctaataatttgagaaaatcacataattctgtgtaattatatgtgtcggtgtcgtgtccgacaccaggacacgcctaat 135287  T

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Target: scaffold0123 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 171 - 216
Target Start/End: Complemental strand, 44578 - 44533
Alignment:
Q  171 gctaataatttgagaaaatcaaataattaagtgtaattatatgtgt 216  Q
    ||||| ||||||||||||||| |||||| |||||||||||||||||    
T  44578 gctaaaaatttgagaaaatcacataattcagtgtaattatatgtgt 44533  T

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Target: scaffold0036 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 216
Target Start/End: Complemental strand, 9799 - 9755
Alignment:
Q  172 ctaataatttgagaaaatcaaataattaagtgtaattatatgtgt 216  Q
    ||||||||||||||||||||  ||||| |||||||||||||||||    
T  9799 ctaataatttgagaaaatcacttaattcagtgtaattatatgtgt 9755  T

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Target: scaffold0022 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 173 - 212
Target Start/End: Original strand, 90851 - 90890
Alignment:
Q  173 taataatttgagaaaatcaaataattaagtgtaattatat 212  Q
    ||||||||||||||||||| |||||| |||||||||||||    
T  90851 taataatttgagaaaatcatataattcagtgtaattatat 90890  T

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Target: scaffold0044 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 216
Target Start/End: Original strand, 53189 - 53231
Alignment:
Q  174 aataatttgagaaaatcaaataattaagtgtaattatatgtgt 216  Q
    |||||||||||||||||| |||||| |||||||||||| ||||    
T  53189 aataatttgagaaaatcacataattcagtgtaattataagtgt 53231  T

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Target: scaffold0008 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 216
Target Start/End: Complemental strand, 263426 - 263380
Alignment:
Q  170 tgctaataatttgagaaaatcaaataattaagtgtaattatatgtgt 216  Q
    ||||||||||||||||||| || |||||| |||||||||||| ||||    
T  263426 tgctaataatttgagaaaaccacataattcagtgtaattataagtgt 263380  T

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