View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12670_high_16 (Length: 248)
Name: NF12670_high_16
Description: NF12670
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12670_high_16 |
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Alignment Details
Target: chr5 (Bit Score: 228; Significance: 1e-126; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 1 - 236
Target Start/End: Original strand, 10337273 - 10337508
Alignment:
| Q |
1 |
ctcctcactacacattaaggtgttaagttaaaaggaacttcttaacttctttaagttctcaatcatcacctcatatcacaacttattgtcaattatcact |
100 |
Q |
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| T |
10337273 |
ctcctcactacacattaaggtgttaagttaaaaggaacttcttaacttctttaagttctcaatcatcacctcatatcacaacttattgtcaattatcact |
10337372 |
T |
|
| Q |
101 |
actctcactttttctccttctttttctttaaccatgccacaaaattgcatagcaccaaagcccgaatactttaatagtactctctctttggaaggatcac |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
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| T |
10337373 |
actctcactttttctccttctttttctttaaccatgccacaaaattgcatagcaccaaagccagaatactttaatagtactctctctttggaaggatcac |
10337472 |
T |
|
| Q |
201 |
cacacatgactgatcctcatagctcaaacagtgaac |
236 |
Q |
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|||||||||||||||||||||||||||||| ||||| |
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| T |
10337473 |
cacacatgactgatcctcatagctcaaacaatgaac |
10337508 |
T |
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